Rroxscaffold_2G00097010

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
18320378 .. 18323149
2772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00097010.1

Sequence Viewer

Length: 1587 bp
ATGTCCAAGGCAGGGATAATATCGGCTGTGTGTTTGTCCATTTGCAAGCCGTCCAGCAGCATATTAGTAAATAATAGCTGCGGTGGTATCAACTGTTGTCAGACATCCCTTCGTTCATCCATTGGTTCAACCTTCCATATTAATTTTGGACCGTTGATACTAAATGATACCAGTGAAAGAACTTGTAAGTATGCATTCCTGGTAGACCCAGAGTGGTTTACGTCTAATTCAACAAATACTTCTACCATTGCTGAGATGGACGACGTCCCCATAGTGCTAAATTGGGGGATTGGGAGAAGAATAGATAATTCAACCGAGGATGACGTGAACAGGAATTGCACATCTCCAATAGGTCCATGTTCCTGCTTAGAGGGCTATCAAGGAAACCCCTATTTGCGTGGTGGATGTCAAGTTCTCTGCAGTGTCTTTGGACTGTTGTTTCATATCATTGGCGCATGGTGGTTGCACAAAGTCATAAAGAAAAGGAAAAACATTAAGCTCAAGCAAAAGTTTTTTAGACTGAATGGTGGTTTGTTGTTGGAGCAACAGTTAACTTCTGGCGAAGTCAATGTTGAGAAGATTAAGCTGTTCAATGCAACGGAGTTAGAGAAAGCCACAGACCGGTTTAATGTAAACAGAATTCTCGGGCAAGGAGGACAAGGTACTGTTTATAAAGGAATGTTGACAGACGGAAAAATTGTTGCTGTCAAGAAGTCAAAAGTAGTAGATGGAGGAGAAGTGAGTCAATTCATTAATGAGATTGTCATTCTTTCACAAATTAACCACAGGAATGTGGTTAAACTCTTGGGATGTTGTTTAGAGAGCGAAGTTCCCCTATTGGTCTATGAATTTTTACCCAACGGAACCCTTTCTCAATACATTCACAGCCGTGATGAGGATTTTCCTTTAACTTGGGAAATGCGATTACGAGTTGGTACCGAAGTTGCTGGAGCCCTTTCCTACTTACATTCATCTGCTTCAATGCCCATTTACCATCGAGACATTAAGTCTTCAAACATACTCTTGGATGATAAACATAGAGCAAAAGTTGCAGACTTTGGGACATCAAGAACTGTTTCCATTGACAAAACACATCTTACCATGACACATGTAGACGGAACATATGGTTATTTGGACCCTGAGTACTTCCAGTCTAGCCAATTTACAGACAAGAGCGACGTTTATAGCTTCGGAGTAGTCCTTGCAGAACTCTTGACTGGACAAAAACCAGTTAATGTAACAAGATCGCAGGAAGGGAAACAAGATGGGAGAAGCCTAGCAACACATTTTATTGTGTCCATGGAGGAGAGTTGTTTGTTTGATATTCTTGATGCTGAAGTTATGAAGGGAGGTAAGAAAGAAGAGATAGTGGCGGTTGCTAATCTTGCAAAACGTTGCTTGAATATGAAAGGAAAGAAGCGTCCAACTATGAAAGAAATAGCAGTTGAGTTGGAGGGAATTCTAATGTCAAGTAAATCTTCTGATGTCGAACACATTGCAGAGGTTGAACATGTCCAGACGGAAATAGCCGAGGTTTGGGATGTTTCTACATCAACAGGCTCTCATATGGACACCGTTCTTCATTAG

Protein Analysis

528

Amino Acids

58.44

Weight (kDa)

6.33

Isoelectric Point (pI)

37.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WAK PF08488 24 - 97 1.2e-07 Wall-associated kinase
Pkinase PF00069 209 - 480 4.4e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 211 - 483 1.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 672
AatII GACGTC 1 cut(s) 267
Acc65I GGTACC 1 cut(s) 935
AccB1I GGYRCC 1 cut(s) 935
AccI GTMKAC 2 cut(s) 204, 1113
AciI CCGC 2 cut(s) 81, 1373
AclI AACGTT 1 cut(s) 1393
AcsI RAATTY 3 cut(s) 639, 848, 1458
AcuI CTGAAG 1 cut(s) 1356
AcyI GRCGYC 1 cut(s) 264
AfaI GTAC 3 cut(s) 664, 937, 1145
AfiI CCNNNNNNNGG 4 cut(s) 12, 621, 895, 1536
AflIII ACRYGT 2 cut(s) 1108, 1510
AgeI ACCGGT 1 cut(s) 621
AgsI TTSAA 8 cut(s) 129, 231, 312, 592, 981, 1014, 1402, 1508
AhdI GACNNNNNGTC 1 cut(s) 1006
AjiI CACGTC 1 cut(s) 325
AjnI CCWGG 1 cut(s) 198
AleI CACNNNNGTG 1 cut(s) 888
AloI GAACNNNNNNTCC 2 cut(s) 396, 428
AluBI AGCT 4 cut(s) 78, 499, 586, 1188
AluI AGCT 4 cut(s) 78, 499, 586, 1188
Alw26I GTCTC 1 cut(s) 993
Ama87I CYCGRG 1 cut(s) 644
ApeKI GCWGC 2 cut(s) 57, 78
ApoI RAATTY 3 cut(s) 639, 848, 1458
AseI ATTAAT 2 cut(s) 141, 753
AsiGI ACCGGT 1 cut(s) 621
Asp700I GAANNNNTTC 2 cut(s) 868, 1075
Asp718I GGTACC 1 cut(s) 935
AspLEI GCGC 1 cut(s) 455
AspS9I GGNCC 3 cut(s) 149, 353, 1135
AvaI CYCGRG 1 cut(s) 644
AvaII GGWCC 3 cut(s) 149, 353, 1135
BaeI ACNNNNGTAYC 2 cut(s) 927, 960
BanI GGYRCC 1 cut(s) 935
BanII GRGCYC 1 cut(s) 955
BbsI GAAGAC 1 cut(s) 1002
BbvI GCAGC 2 cut(s) 65, 69
BccI CCATC 4 cut(s) 250, 722, 1002, 1259
BceAI ACGGC 2 cut(s) 34, 873
BcgI CGANNNNNNTGC 2 cut(s) 1478, 1512
BciT130I CCWGG 1 cut(s) 200
BcoDI GTCTC 1 cut(s) 993
BfaI CTAG 2 cut(s) 1155, 1277
BfmI CTRYAG 1 cut(s) 418
BisI GCNGC 2 cut(s) 58, 79
BlsI GCNGC 2 cut(s) 59, 80
BmcAI AGTACT 1 cut(s) 1145
Bme1390I CCNGG 1 cut(s) 200
Bme18I GGWCC 3 cut(s) 149, 353, 1135
BmeRI GACNNNNNGTC 1 cut(s) 1006
BmeT110I CYCGRG 1 cut(s) 644
BmgBI CACGTC 1 cut(s) 325
BmgT120I GGNCC 3 cut(s) 149, 353, 1135
BmiI GGNNCC 4 cut(s) 865, 937, 952, 1137
BmrFI CCNGG 1 cut(s) 200
BmsI GCATC 1 cut(s) 1321
BpiI GAAGAC 1 cut(s) 1002
BpmI CTGGAG 1 cut(s) 969
BpuEI CTTGAG 1 cut(s) 485
BsaHI GRCGYC 1 cut(s) 264
BsaJI CCNNGG 4 cut(s) 6, 315, 1299, 1530
BsaWI WCCGGW 1 cut(s) 621
BsaXI ACNNNNNCTCC 4 cut(s) 533, 563, 723, 753
Bsc4I CCNNNNNNNGG 4 cut(s) 12, 621, 895, 1536
Bse118I RCCGGY 1 cut(s) 621
Bse1I ACTGG 4 cut(s) 171, 1150, 1222, 1229
Bse3DI GCAATG 2 cut(s) 246, 1494
BseBI CCWGG 1 cut(s) 200
BseDI CCNNGG 4 cut(s) 6, 315, 1299, 1530
BseGI GGATG 7 cut(s) 104, 116, 325, 410, 815, 1033, 1546
BseLI CCNNNNNNNGG 4 cut(s) 12, 621, 895, 1536
BseMI GCAATG 2 cut(s) 246, 1494
BseMII CTCAG 2 cut(s) 243, 1131
BseNI ACTGG 4 cut(s) 171, 1150, 1222, 1229
BseRI GAGGAG 2 cut(s) 747, 1319
BseXI GCAGC 2 cut(s) 65, 69
BshNI GGYRCC 1 cut(s) 935
BshTI ACCGGT 1 cut(s) 621
BsiHKCI CYCGRG 1 cut(s) 644
BsiSI CCGG 1 cut(s) 622
BslFI GGGAC 2 cut(s) 251, 1075
BslI CCNNNNNNNGG 4 cut(s) 12, 621, 895, 1536
BsmAI GTCTC 1 cut(s) 993
BsmFI GGGAC 2 cut(s) 251, 1075
BsmI GAATGC 1 cut(s) 194
BsoBI CYCGRG 1 cut(s) 644
Bsp1286I GDGCHC 1 cut(s) 955
Bsp143I GATC 1 cut(s) 1244
Bsp19I CCATGG 1 cut(s) 1299
BspACI CCGC 2 cut(s) 81, 1373
BspCNI CTCAG 2 cut(s) 244, 1132
BspLI GGNNCC 4 cut(s) 865, 937, 952, 1137
BspMAI CTGCAG 1 cut(s) 422
BspT107I GGYRCC 1 cut(s) 935
BsrDI GCAATG 2 cut(s) 246, 1494
BsrFI RCCGGY 1 cut(s) 621
BsrI ACTGG 4 cut(s) 171, 1150, 1222, 1229
BssAI RCCGGY 1 cut(s) 621
BssECI CCNNGG 4 cut(s) 6, 315, 1299, 1530
BssMI GATC 1 cut(s) 1244
BssNI GRCGYC 1 cut(s) 264
BssT1I CCWWGG 2 cut(s) 6, 1299
Bst2UI CCWGG 1 cut(s) 200
Bst4CI ACNGT 7 cut(s) 95, 153, 435, 549, 667, 1075, 1576
Bst6I CTCTTC 1 cut(s) 1356
BstACI GRCGYC 1 cut(s) 264
BstAPI GCANNNNNTGC 1 cut(s) 1049
BstC8I GCNNGC 1 cut(s) 47
BstDEI CTNAG 3 cut(s) 252, 367, 1140
BstDSI CCRYGG 1 cut(s) 1299
BstF5I GGATG 7 cut(s) 104, 116, 325, 410, 815, 1033, 1546
BstHHI GCGC 1 cut(s) 455
BstKTI GATC 1 cut(s) 1247
BstMAI GTCTC 1 cut(s) 993
BstMBI GATC 1 cut(s) 1244
BstMWI GCNNNNNNNGC 3 cut(s) 372, 1049, 1385
BstNI CCWGG 1 cut(s) 200
BstNSI RCATGY 2 cut(s) 1112, 1514
BstSCI CCNGG 1 cut(s) 198
BstSFI CTRYAG 1 cut(s) 418
BstV1I GCAGC 2 cut(s) 65, 69
BstV2I GAAGAC 1 cut(s) 1002
BtgI CCRYGG 1 cut(s) 1299
BtrI CACGTC 1 cut(s) 325
BtsCI GGATG 7 cut(s) 104, 116, 325, 410, 815, 1033, 1546
BtsI GCAGTG 1 cut(s) 427
BtsIMutI CAGTG 2 cut(s) 178, 427
Cac8I GCNNGC 1 cut(s) 47
CfoI GCGC 1 cut(s) 455
Cfr10I RCCGGY 1 cut(s) 621
Cfr13I GGNCC 3 cut(s) 149, 353, 1135
CseI GACGC 1 cut(s) 1409
Csp6I GTAC 3 cut(s) 663, 936, 1144
CspAI ACCGGT 1 cut(s) 621
CviAII CATG 6 cut(s) 357, 456, 1102, 1109, 1300, 1511
CviQI GTAC 3 cut(s) 663, 936, 1144
DdeI CTNAG 3 cut(s) 252, 367, 1140
DpnI GATC 1 cut(s) 1246
DpnII GATC 1 cut(s) 1244
DriI GACNNNNNGTC 1 cut(s) 1006
Eam1104I CTCTTC 1 cut(s) 1356
Eam1105I GACNNNNNGTC 1 cut(s) 1006
EarI CTCTTC 1 cut(s) 1356
Eco130I CCWWGG 2 cut(s) 6, 1299
Eco24I GRGCYC 1 cut(s) 955
Eco47I GGWCC 3 cut(s) 149, 353, 1135
Eco57I CTGAAG 1 cut(s) 1356
Eco88I CYCGRG 1 cut(s) 644
EcoRI GAATTC 2 cut(s) 639, 1458
EcoRII CCWGG 1 cut(s) 198
EcoT14I CCWWGG 2 cut(s) 6, 1299
EcoT22I ATGCAT 1 cut(s) 196
EcoT38I GRGCYC 1 cut(s) 955
ErhI CCWWGG 2 cut(s) 6, 1299
FaeI CATG 6 cut(s) 360, 459, 1105, 1112, 1303, 1514
FalI AAGNNNNNCTT 2 cut(s) 1462, 1494
FaqI GGGAC 2 cut(s) 251, 1075
FatI CATG 6 cut(s) 356, 455, 1101, 1108, 1299, 1510
FauNDI CATATG 2 cut(s) 1123, 1566
FblI GTMKAC 2 cut(s) 204, 1113
Fnu4HI GCNGC 2 cut(s) 58, 79
FokI GGATG 7 cut(s) 91, 103, 332, 417, 822, 1040, 1553
FriOI GRGCYC 1 cut(s) 955
Fsp4HI GCNGC 2 cut(s) 58, 79
FspBI CTAG 2 cut(s) 1155, 1277
GlaI GCGC 1 cut(s) 454
GluI GCNGC 2 cut(s) 58, 79
GsuI CTGGAG 1 cut(s) 969
HapII CCGG 1 cut(s) 622
HgaI GACGC 1 cut(s) 1409
HhaI GCGC 1 cut(s) 455
Hin1I GRCGYC 1 cut(s) 264
Hin1II CATG 6 cut(s) 360, 459, 1105, 1112, 1303, 1514
Hin6I GCGC 1 cut(s) 453
HinP1I GCGC 1 cut(s) 453
HincII GTYRAC 2 cut(s) 552, 684
HindII GTYRAC 2 cut(s) 552, 684
HinfI GANTC 1 cut(s) 742
HpaI GTTAAC 1 cut(s) 552
HpaII CCGG 1 cut(s) 622
Hpy166II GTNNAC 7 cut(s) 205, 219, 328, 552, 634, 684, 1114
Hpy188I TCNGA 3 cut(s) 102, 1193, 1483
Hpy188III TCNNGA 6 cut(s) 709, 998, 1068, 1213, 1328, 1516
Hpy8I GTNNAC 7 cut(s) 205, 219, 328, 552, 634, 684, 1114
Hpy99I CGWCG 2 cut(s) 266, 1181
HpyAV CCTTC 4 cut(s) 119, 142, 1247, 1339
HpyCH4III ACNGT 7 cut(s) 95, 153, 435, 549, 667, 1075, 1576
HpyCH4IV ACGT 5 cut(s) 221, 264, 324, 1179, 1393
HpyF10VI GCNNNNNNNGC 3 cut(s) 372, 1049, 1385
HpyF3I CTNAG 3 cut(s) 252, 367, 1140
HpySE526I ACGT 5 cut(s) 221, 264, 324, 1179, 1393
Hsp92I GRCGYC 1 cut(s) 264
Hsp92II CATG 6 cut(s) 360, 459, 1105, 1112, 1303, 1514
HspAI GCGC 1 cut(s) 453
KpnI GGTACC 1 cut(s) 939
KspAI GTTAAC 1 cut(s) 552
Kzo9I GATC 1 cut(s) 1244
LmnI GCTCC 2 cut(s) 541, 950
Lsp1109I GCAGC 2 cut(s) 65, 69
LweI GCATC 1 cut(s) 1321
MaeI CTAG 2 cut(s) 1155, 1277
MaeII ACGT 5 cut(s) 221, 264, 324, 1179, 1393
MaeIII GTNAC 1 cut(s) 1237
MalI GATC 1 cut(s) 1246
MboI GATC 1 cut(s) 1244
MboII GAAGA 6 cut(s) 309, 589, 1002, 1373, 1470, 1571
MhlI GDGCHC 1 cut(s) 955
MlyI GAGTC 1 cut(s) 751
MmeI TCCRAC 3 cut(s) 519, 1431, 1448
Mph1103I ATGCAT 1 cut(s) 196
MroXI GAANNNNTTC 2 cut(s) 868, 1075
MslI CAYNNNNRTG 2 cut(s) 789, 888
MspI CCGG 1 cut(s) 622
MspR9I CCNGG 1 cut(s) 200
Mva1269I GAATGC 1 cut(s) 194
MvaI CCWGG 1 cut(s) 200
MwoI GCNNNNNNNGC 3 cut(s) 372, 1049, 1385
NcoI CCATGG 1 cut(s) 1299
NdeI CATATG 2 cut(s) 1123, 1566
NdeII GATC 1 cut(s) 1244
NlaIII CATG 6 cut(s) 360, 459, 1105, 1112, 1303, 1514
NlaIV GGNNCC 4 cut(s) 865, 937, 952, 1137
NmeAIII GCCGAG 1 cut(s) 1555
NsiI ATGCAT 1 cut(s) 196
NspI RCATGY 2 cut(s) 1112, 1514
OliI CACNNNNGTG 1 cut(s) 888
PciI ACATGT 2 cut(s) 1108, 1510
PctI GAATGC 1 cut(s) 194
PdmI GAANNNNTTC 2 cut(s) 868, 1075
PflFI GACNNNGTC 1 cut(s) 263
PinAI ACCGGT 1 cut(s) 621
PkrI GCNGC 2 cut(s) 59, 80
PleI GAGTC 1 cut(s) 750
PpsI GAGTC 1 cut(s) 750
PscI ACATGT 2 cut(s) 1108, 1510
PshBI ATTAAT 2 cut(s) 141, 753
PsiI TTATAA 1 cut(s) 672
Psp1406I AACGTT 1 cut(s) 1393
Psp6I CCWGG 1 cut(s) 198
PspGI CCWGG 1 cut(s) 198
PspN4I GGNNCC 4 cut(s) 865, 937, 952, 1137
PspPI GGNCC 3 cut(s) 149, 353, 1135
PstI CTGCAG 1 cut(s) 422
PsyI GACNNNGTC 1 cut(s) 263
RsaI GTAC 3 cut(s) 664, 937, 1145
RsaNI GTAC 3 cut(s) 663, 936, 1144
RseI CAYNNNNRTG 2 cut(s) 789, 888
SatI GCNGC 2 cut(s) 58, 79
Sau3AI GATC 1 cut(s) 1244
Sau96I GGNCC 3 cut(s) 149, 353, 1135
ScaI AGTACT 1 cut(s) 1145
SchI GAGTC 1 cut(s) 751
ScrFI CCNGG 1 cut(s) 200
SduI GDGCHC 1 cut(s) 955
SfaNI GCATC 1 cut(s) 1321
SfcI CTRYAG 1 cut(s) 418
SinI GGWCC 3 cut(s) 149, 353, 1135
SmiMI CAYNNNNRTG 2 cut(s) 789, 888
SmlI CTYRAG 1 cut(s) 500
SmoI CTYRAG 1 cut(s) 500
SsiI CCGC 2 cut(s) 81, 1373
SspMI CTAG 2 cut(s) 1155, 1277
StyD4I CCNGG 1 cut(s) 198
StyI CCWWGG 2 cut(s) 6, 1299
TaaI ACNGT 7 cut(s) 95, 153, 435, 549, 667, 1075, 1576
TaiI ACGT 5 cut(s) 224, 267, 327, 1182, 1396
TaqI TCGA 2 cut(s) 997, 1488
TatI WGTACW 1 cut(s) 1143
TscAI CASTG 2 cut(s) 178, 427
TseI GCWGC 2 cut(s) 57, 78
TspDTI ATGAA 9 cut(s) 105, 431, 739, 861, 960, 1358, 1421, 1445, 1571
TspGWI ACGGA 5 cut(s) 614, 705, 876, 1131, 1535
TspRI CASTG 2 cut(s) 178, 427
Tth111I GACNNNGTC 1 cut(s) 263
VpaK11BI GGWCC 3 cut(s) 149, 353, 1135
VspI ATTAAT 2 cut(s) 141, 753
XapI RAATTY 3 cut(s) 639, 848, 1458
XceI RCATGY 2 cut(s) 1112, 1514
XcmI CCANNNNNNNNNTGG 2 cut(s) 143, 253
XmiI GTMKAC 2 cut(s) 204, 1113
XmnI GAANNNNTTC 2 cut(s) 868, 1075
XspI CTAG 2 cut(s) 1155, 1277
ZraI GACGTC 1 cut(s) 265
ZrmI AGTACT 1 cut(s) 1145
Zsp2I ATGCAT 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.