RLG00000001788

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
20796517 .. 20799422
2906 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001788

Sequence Viewer

Length: 1887 bp
ATGTCAACTTGTGGTGACAACACCGCGGACAATGGTTGTATTGGTACTAACTGTTGCCAGACTAGTCTTCCTCAATATCTCAGTGAGATTAGTACTGAGTTGCAATCTGAATCTGCAGAAGCAAATAGCGGAAAGCAACCAGATGCAATATTATCTGCCCATAGCTATGCATTTATGGTTGAGCAAGAATGGTTTCAGAATAATGTATCAAATTTTGGAGACATCAAGGATATGGACAACGTTCCTGTGGTGCTAGAATGGAGGTTAAGCTTAGACAAGAACAGTTCATCATTCACATCGTATGAAAAATTCATTGAAAAGACAGGTTTGGGTTATACTTTATCGAGGATACCATATACGGATAAATATTCATTTTTTTATGCCTTACAAGATTATTTGAATATAACGTTGCGACGAGATGACGACCCAACACCGTATTATTATTTATTTAATGCCACTTCTCCGACAAACAATCTTCCAATGCTTCAGTGTTTCTGTCCGGCCGGCTATGATGGAAACCCCTTTCTTGTCCAACCTTGTCAAGATATCGATGAGTGTCAGGAAGACATTCCGTGTATGGGCAATGATATCGCTGCCCAAATATGGAATTTCAGTGGTGGCTCTTGTCAAAATACTGATGGGGGTCATCTATGCTACTCGAGTATAGATAGCGTTGCTTGTGAATTTCATGGTAGGAGTGGTGCTTTATGCTTCACAACCAGTCCCTACAATCCTGGTCCGTTCCATCAGCTCAACCAGTCGAGCCCAGCTGTTCTTGGTATATACCTGGGTTTTGCATTGTTGTTACTATTCATGGTTGCACGTTCTGTTTACACAGTCATAAACAAAAAGAGAAACACTATCCGCAAGAAAATGTTTTTCAAGAGAAATGGAGGCTTATTGTTAGAGAAACAACTACGGTTTGCTGAAATTAACGGTGAGAAGATCAAGCTCTTCAAATCAAAAGAATTAGAGAAGTCCACTGACAATTTTAGTATAAATAGAATTCTTGGACACGGAGGTCATGGTACTGTGTATAAAGGGATGTTGAAGGATGGAAGAATTGTTGCTATAAAGAAGTCTAAACTGGTAGATGAAATCAAGCTTGCAGAATTCATCAATGAGGTCGTCATTCTTTCAGAAATCAAACACAGGAATGTAGTTAAATTGCTGGGTTGTTGTTTAGAGACTGAAGTTCCTATTTTAGTGTATGAATTCATACCTAATGGAACGCTATTCCAGTATATCCATGAGAAGAGTGAGGAATTTCCCCTTACATGGAAAATGCGCTTACGTATTGCCACAGAAATTGCTGGAGCTCTTTCCTACTTACATGCTACAGCTTCATGTCCCATTTATCACAGGGATATTAAGTCTACGAACATTCTCTTGGATGAAAAATACAGAGCTAAACTTGCGGACTTTGGAACTTCTAGATCAGTTGCTATTGACCAAACTCACCTGACCACACTTGTACATGGCACATTCGGTTATTTGGACCCCGAATACTTCCGATCAAGCAAATTTACGGAGAAAAGTGATGTGTATAGCTTCGGGGTCGTCCTCGTTGAGCTGTTGACAGGGAAGAAACCTGTTTCCGCAATAAAAGTGTTGAAAGAAGAAGAAGAATACCAGAGTCTTGTTGCATGTTTCATTATATTGATGCAAGAAAATCGTTTATTTGACATTGTTGATGCACAGGTTTTAAAGGAGGGTTCTACAAATGATATTAGAATAGTTGCTAACCTTGCAAATAAATGTTTAGATTTGAATGGAAGGAAGCGCCCTACTATGAGAGAGGTCACAGCTGAGTTGGAAGTCATCCAAATGTCAAAAATGACTTCAATTACTGAACAAAATTATAAAGGTGTTGAACTTCTATGTTAA

Protein Analysis

629

Amino Acids

70.77

Weight (kDa)

5.76

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 332 - 602 3.1e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 333 - 605 2.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1863
AasI GACNNNNNNGTC 1 cut(s) 1020
AccI GTMKAC 1 cut(s) 1376
AccII CGCG 1 cut(s) 26
AciI CCGC 6 cut(s) 24, 26, 129, 865, 1418, 1599
AclI AACGTT 2 cut(s) 240, 407
AcoI YGGCCR 1 cut(s) 501
AcsI RAATTY 9 cut(s) 211, 308, 607, 683, 1005, 1112, 1214, 1265, 1523
AcuI CTGAAG 2 cut(s) 470, 1212
AfaI GTAC 4 cut(s) 46, 94, 1030, 1476
AfiI CCNNNNNNNGG 3 cut(s) 578, 603, 1278
AgsI TTSAA 9 cut(s) 317, 400, 883, 958, 1051, 1615, 1771, 1845, 1874
AhlI ACTAGT 1 cut(s) 62
AjnI CCWGG 2 cut(s) 733, 786
AjuI GAANNNNNNNTTGG 2 cut(s) 1373, 1405
Alw21I GWGCWC 1 cut(s) 1321
Alw26I GTCTC 2 cut(s) 213, 1181
Ama87I CYCGRG 1 cut(s) 658
AoxI GGCC 1 cut(s) 501
ApeKI GCWGC 1 cut(s) 593
ApoI RAATTY 9 cut(s) 211, 308, 607, 683, 1005, 1112, 1214, 1265, 1523
Asp700I GAANNNNTTC 2 cut(s) 192, 567
AspLEI GCGC 2 cut(s) 1290, 1785
AspS9I GGNCC 2 cut(s) 737, 1498
AsuHPI GGTGA 3 cut(s) 26, 950, 1451
AvaI CYCGRG 1 cut(s) 658
AvaII GGWCC 2 cut(s) 737, 1498
BanII GRGCYC 2 cut(s) 767, 1321
BbsI GAAGAC 2 cut(s) 59, 570
Bbv12I GWGCWC 1 cut(s) 1321
BbvI GCAGC 1 cut(s) 580
BccI CCATC 4 cut(s) 506, 632, 753, 1049
BcgI CGANNNNNNTGC 4 cut(s) 571, 605, 1655, 1689
BciT130I CCWGG 2 cut(s) 735, 788
BciVI GTATCC 1 cut(s) 342
BcoDI GTCTC 2 cut(s) 213, 1181
BcuI ACTAGT 1 cut(s) 62
BfaI CTAG 3 cut(s) 63, 254, 1434
BfmI CTRYAG 2 cut(s) 114, 1338
BfoI RGCGCY 1 cut(s) 1786
BfuI GTATCC 1 cut(s) 342
BisI GCNGC 1 cut(s) 594
BlsI GCNGC 1 cut(s) 595
BmcAI AGTACT 1 cut(s) 94
Bme1390I CCNGG 2 cut(s) 735, 788
Bme18I GGWCC 2 cut(s) 737, 1498
BmeT110I CYCGRG 1 cut(s) 658
BmgT120I GGNCC 2 cut(s) 737, 1498
BmiI GGNNCC 1 cut(s) 1500
BmrFI CCNGG 2 cut(s) 735, 788
BmsI GCATC 3 cut(s) 133, 1653, 1684
BpiI GAAGAC 2 cut(s) 59, 570
BpmI CTGGAG 1 cut(s) 1335
Bsa29I ATCGAT 1 cut(s) 549
BsaAI YACGTR 1 cut(s) 1295
BsaJI CCNNGG 2 cut(s) 24, 787
Bsc4I CCNNNNNNNGG 3 cut(s) 578, 603, 1278
Bse118I RCCGGY 1 cut(s) 503
Bse1I ACTGG 4 cut(s) 720, 757, 1092, 1240
Bse3DI GCAATG 1 cut(s) 589
BseBI CCWGG 2 cut(s) 735, 788
BseCI ATCGAT 1 cut(s) 549
BseDI CCNNGG 2 cut(s) 24, 787
BseGI GGATG 4 cut(s) 1050, 1060, 1399, 1821
BseLI CCNNNNNNNGG 3 cut(s) 578, 603, 1278
BseMI GCAATG 1 cut(s) 589
BseMII CTCAG 3 cut(s) 87, 94, 1800
BseNI ACTGG 4 cut(s) 720, 757, 1092, 1240
BseX3I CGGCCG 1 cut(s) 501
BseXI GCAGC 1 cut(s) 580
BseYI CCCAGC 2 cut(s) 766, 1171
Bsh1236I CGCG 1 cut(s) 26
Bsh1285I CGRYCG 1 cut(s) 504
BshFI GGCC 1 cut(s) 503
BshVI ATCGAT 1 cut(s) 549
BsiEI CGRYCG 1 cut(s) 504
BsiHKAI GWGCWC 1 cut(s) 1321
BsiHKCI CYCGRG 1 cut(s) 658
BsiSI CCGG 2 cut(s) 500, 504
BslFI GGGAC 2 cut(s) 708, 1335
BslI CCNNNNNNNGG 3 cut(s) 578, 603, 1278
BsmAI GTCTC 2 cut(s) 213, 1181
BsmFI GGGAC 2 cut(s) 708, 1335
BsnI GGCC 1 cut(s) 503
BsoBI CYCGRG 1 cut(s) 658
Bsp1286I GDGCHC 2 cut(s) 767, 1321
Bsp1407I TGTACA 1 cut(s) 1474
Bsp143I GATC 3 cut(s) 945, 1436, 1514
BspACI CCGC 6 cut(s) 24, 26, 129, 865, 1418, 1599
BspANI GGCC 1 cut(s) 503
BspCNI CTCAG 3 cut(s) 88, 93, 1801
BspDI ATCGAT 1 cut(s) 549
BspFNI CGCG 1 cut(s) 26
BspLI GGNNCC 1 cut(s) 1500
BspMAI CTGCAG 1 cut(s) 118
BspQI GCTCTTC 1 cut(s) 959
BsrDI GCAATG 1 cut(s) 589
BsrFI RCCGGY 1 cut(s) 503
BsrGI TGTACA 1 cut(s) 1474
BsrI ACTGG 4 cut(s) 720, 757, 1092, 1240
BssAI RCCGGY 1 cut(s) 503
BssECI CCNNGG 2 cut(s) 24, 787
BssMI GATC 3 cut(s) 945, 1436, 1514
Bst2UI CCWGG 2 cut(s) 735, 788
Bst4CI ACNGT 7 cut(s) 53, 284, 435, 838, 921, 938, 1033
Bst6I CTCTTC 2 cut(s) 959, 1250
BstAUI TGTACA 1 cut(s) 1474
BstBAI YACGTR 1 cut(s) 1295
BstC8I GCNNGC 2 cut(s) 505, 1107
BstDEI CTNAG 4 cut(s) 80, 96, 271, 1809
BstDSI CCRYGG 1 cut(s) 24
BstF5I GGATG 4 cut(s) 1050, 1060, 1399, 1821
BstFNI CGCG 1 cut(s) 26
BstH2I RGCGCY 1 cut(s) 1786
BstHHI GCGC 2 cut(s) 1290, 1785
BstKTI GATC 3 cut(s) 948, 1439, 1517
BstMAI GTCTC 2 cut(s) 213, 1181
BstMBI GATC 3 cut(s) 945, 1436, 1514
BstMCI CGRYCG 1 cut(s) 504
BstMWI GCNNNNNNNGC 2 cut(s) 1415, 1748
BstNI CCWGG 2 cut(s) 735, 788
BstNSI RCATGY 2 cut(s) 1337, 1650
BstSCI CCNGG 2 cut(s) 733, 786
BstSFI CTRYAG 2 cut(s) 114, 1338
BstSNI TACGTA 1 cut(s) 1295
BstUI CGCG 1 cut(s) 26
BstV1I GCAGC 1 cut(s) 580
BstV2I GAAGAC 2 cut(s) 59, 570
BstZI CGGCCG 1 cut(s) 501
Bsu15I ATCGAT 1 cut(s) 549
BsuI GTATCC 1 cut(s) 342
BsuRI GGCC 1 cut(s) 503
BsuTUI ATCGAT 1 cut(s) 549
BtgI CCRYGG 1 cut(s) 24
BtsCI GGATG 4 cut(s) 1050, 1060, 1399, 1821
BtsIMutI CAGTG 4 cut(s) 88, 494, 619, 981
Cac8I GCNNGC 2 cut(s) 505, 1107
CfoI GCGC 2 cut(s) 1290, 1785
Cfr10I RCCGGY 1 cut(s) 503
Cfr13I GGNCC 2 cut(s) 737, 1498
Cfr42I CCGCGG 1 cut(s) 27
ClaI ATCGAT 1 cut(s) 549
Csp6I GTAC 4 cut(s) 45, 93, 1029, 1475
CspCI CAANNNNNGTGG 2 cut(s) 1291, 1326
CviAII CATG 9 cut(s) 689, 814, 1025, 1250, 1278, 1334, 1347, 1478, 1647
CviQI GTAC 4 cut(s) 45, 93, 1029, 1475
DdeI CTNAG 4 cut(s) 80, 96, 271, 1809
DpnI GATC 3 cut(s) 947, 1438, 1516
DpnII GATC 3 cut(s) 945, 1436, 1514
DraI TTTAAA 1 cut(s) 1707
DrdI GACNNNNNNGTC 1 cut(s) 1020
DseDI GACNNNNNNGTC 1 cut(s) 1020
EaeI YGGCCR 1 cut(s) 501
EagI CGGCCG 1 cut(s) 501
Eam1104I CTCTTC 2 cut(s) 959, 1250
EarI CTCTTC 2 cut(s) 959, 1250
Ecl136II GAGCTC 1 cut(s) 1319
EclXI CGGCCG 1 cut(s) 501
Eco105I TACGTA 1 cut(s) 1295
Eco24I GRGCYC 2 cut(s) 767, 1321
Eco32I GATATC 2 cut(s) 547, 589
Eco47I GGWCC 2 cut(s) 737, 1498
Eco52I CGGCCG 1 cut(s) 501
Eco53kI GAGCTC 1 cut(s) 1319
Eco57I CTGAAG 2 cut(s) 470, 1212
Eco88I CYCGRG 1 cut(s) 658
EcoICRI GAGCTC 1 cut(s) 1319
EcoRI GAATTC 3 cut(s) 1005, 1112, 1214
EcoRII CCWGG 2 cut(s) 733, 786
EcoRV GATATC 2 cut(s) 547, 589
EcoT22I ATGCAT 1 cut(s) 172
EcoT38I GRGCYC 2 cut(s) 767, 1321
FaeI CATG 9 cut(s) 692, 817, 1028, 1253, 1281, 1337, 1350, 1481, 1650
FaqI GGGAC 2 cut(s) 708, 1335
FatI CATG 9 cut(s) 688, 813, 1024, 1249, 1277, 1333, 1346, 1477, 1646
FblI GTMKAC 1 cut(s) 1376
Fnu4HI GCNGC 1 cut(s) 594
FokI GGATG 4 cut(s) 1057, 1067, 1406, 1808
FriOI GRGCYC 2 cut(s) 767, 1321
Fsp4HI GCNGC 1 cut(s) 594
FspBI CTAG 3 cut(s) 63, 254, 1434
GlaI GCGC 2 cut(s) 1289, 1784
GluI GCNGC 1 cut(s) 594
GsaI CCCAGC 2 cut(s) 770, 1175
GsuI CTGGAG 1 cut(s) 1335
HaeII RGCGCY 1 cut(s) 1786
HaeIII GGCC 1 cut(s) 503
HapII CCGG 2 cut(s) 500, 504
HhaI GCGC 2 cut(s) 1290, 1785
Hin1II CATG 9 cut(s) 692, 817, 1028, 1253, 1281, 1337, 1350, 1481, 1650
Hin6I GCGC 2 cut(s) 1288, 1783
HinP1I GCGC 2 cut(s) 1288, 1783
HincII GTYRAC 2 cut(s) 6, 1578
HindII GTYRAC 2 cut(s) 6, 1578
HindIII AAGCTT 2 cut(s) 268, 1103
HinfI GANTC 2 cut(s) 110, 1636
HpaII CCGG 2 cut(s) 500, 504
HphI GGTGA 3 cut(s) 26, 950, 1451
Hpy166II GTNNAC 5 cut(s) 6, 832, 981, 1377, 1578
Hpy188I TCNGA 5 cut(s) 109, 198, 465, 1141, 1514
Hpy188III TCNNGA 4 cut(s) 542, 560, 883, 1434
Hpy8I GTNNAC 5 cut(s) 6, 832, 981, 1377, 1578
Hpy99I CGWCG 1 cut(s) 417
HpyAV CCTTC 2 cut(s) 1045, 1770
HpyCH4III ACNGT 7 cut(s) 53, 284, 435, 838, 921, 938, 1033
HpyCH4IV ACGT 4 cut(s) 240, 407, 823, 1294
HpyF10VI GCNNNNNNNGC 2 cut(s) 1415, 1748
HpyF3I CTNAG 4 cut(s) 80, 96, 271, 1809
HpySE526I ACGT 4 cut(s) 240, 407, 823, 1294
Hsp92II CATG 9 cut(s) 692, 817, 1028, 1253, 1281, 1337, 1350, 1481, 1650
HspAI GCGC 2 cut(s) 1288, 1783
KroI GCCGGC 1 cut(s) 503
KroNI GCCGGC 1 cut(s) 505
KspI CCGCGG 1 cut(s) 27
Kzo9I GATC 3 cut(s) 945, 1436, 1514
LguI GCTCTTC 1 cut(s) 959
LmnI GCTCC 1 cut(s) 1316
Lsp1109I GCAGC 1 cut(s) 580
LweI GCATC 3 cut(s) 133, 1653, 1684
MaeI CTAG 3 cut(s) 63, 254, 1434
MaeII ACGT 4 cut(s) 240, 407, 823, 1294
MaeIII GTNAC 3 cut(s) 14, 804, 1801
MalI GATC 3 cut(s) 947, 1438, 1516
MboI GATC 3 cut(s) 945, 1436, 1514
MhlI GDGCHC 2 cut(s) 767, 1321
MlyI GAGTC 1 cut(s) 1645
MmeI TCCRAC 3 cut(s) 488, 556, 1794
Mph1103I ATGCAT 1 cut(s) 172
MroNI GCCGGC 1 cut(s) 503
MroXI GAANNNNTTC 2 cut(s) 192, 567
MseI TTAA 7 cut(s) 266, 450, 933, 1164, 1371, 1706, 1885
MslI CAYNNNNRTG 3 cut(s) 165, 1155, 1826
MspA1I CMGCKG 3 cut(s) 26, 770, 1808
MspI CCGG 2 cut(s) 500, 504
MspR9I CCNGG 2 cut(s) 735, 788
MvaI CCWGG 2 cut(s) 735, 788
MvnI CGCG 1 cut(s) 26
MwoI GCNNNNNNNGC 2 cut(s) 1415, 1748
NaeI GCCGGC 1 cut(s) 505
NdeII GATC 3 cut(s) 945, 1436, 1514
NgoMIV GCCGGC 1 cut(s) 503
NlaIII CATG 9 cut(s) 692, 817, 1028, 1253, 1281, 1337, 1350, 1481, 1650
NlaIV GGNNCC 1 cut(s) 1500
NmuCI GTSAC 2 cut(s) 14, 1801
NsiI ATGCAT 1 cut(s) 172
NspI RCATGY 2 cut(s) 1337, 1650
PaeR7I CTCGAG 1 cut(s) 658
PciSI GCTCTTC 1 cut(s) 959
PdiI GCCGGC 1 cut(s) 505
PdmI GAANNNNTTC 2 cut(s) 192, 567
PfeI GAWTC 1 cut(s) 110
PkrI GCNGC 1 cut(s) 595
PleI GAGTC 1 cut(s) 1644
PpsI GAGTC 1 cut(s) 1644
Ppu21I YACGTR 1 cut(s) 1295
PsiI TTATAA 1 cut(s) 1863
Psp124BI GAGCTC 1 cut(s) 1321
Psp1406I AACGTT 2 cut(s) 240, 407
Psp6I CCWGG 2 cut(s) 733, 786
PspFI CCCAGC 2 cut(s) 766, 1171
PspGI CCWGG 2 cut(s) 733, 786
PspN4I GGNNCC 1 cut(s) 1500
PspPI GGNCC 2 cut(s) 737, 1498
PspXI VCTCGAGB 1 cut(s) 658
PstI CTGCAG 1 cut(s) 118
PvuII CAGCTG 2 cut(s) 770, 1808
RsaI GTAC 4 cut(s) 46, 94, 1030, 1476
RsaNI GTAC 4 cut(s) 45, 93, 1029, 1475
RseI CAYNNNNRTG 3 cut(s) 165, 1155, 1826
SacI GAGCTC 1 cut(s) 1321
SacII CCGCGG 1 cut(s) 27
SapI GCTCTTC 1 cut(s) 959
SaqAI TTAA 7 cut(s) 266, 450, 933, 1164, 1371, 1706, 1885
SatI GCNGC 1 cut(s) 594
Sau3AI GATC 3 cut(s) 945, 1436, 1514
Sau96I GGNCC 2 cut(s) 737, 1498
ScaI AGTACT 1 cut(s) 94
SchI GAGTC 1 cut(s) 1645
ScrFI CCNGG 2 cut(s) 735, 788
SduI GDGCHC 2 cut(s) 767, 1321
SfaNI GCATC 3 cut(s) 133, 1653, 1684
SfcI CTRYAG 2 cut(s) 114, 1338
Sfr274I CTCGAG 1 cut(s) 658
Sfr303I CCGCGG 1 cut(s) 27
SgrBI CCGCGG 1 cut(s) 27
SinI GGWCC 2 cut(s) 737, 1498
SlaI CTCGAG 1 cut(s) 658
SmiMI CAYNNNNRTG 3 cut(s) 165, 1155, 1826
SmlI CTYRAG 1 cut(s) 658
SmoI CTYRAG 1 cut(s) 658
SnaBI TACGTA 1 cut(s) 1295
SpeI ACTAGT 1 cut(s) 62
SsiI CCGC 6 cut(s) 24, 26, 129, 865, 1418, 1599
SspI AATATT 2 cut(s) 150, 368
SspMI CTAG 3 cut(s) 63, 254, 1434
SstI GAGCTC 1 cut(s) 1321
StyD4I CCNGG 2 cut(s) 733, 786
TaaI ACNGT 7 cut(s) 53, 284, 435, 838, 921, 938, 1033
TaiI ACGT 4 cut(s) 243, 410, 826, 1297
TaqI TCGA 4 cut(s) 344, 549, 659, 761
TatI WGTACW 2 cut(s) 92, 1474
TfiI GAWTC 1 cut(s) 110
Tru1I TTAA 7 cut(s) 266, 450, 933, 1164, 1371, 1706, 1885
Tru9I TTAA 7 cut(s) 266, 450, 933, 1164, 1371, 1706, 1885
TscAI CASTG 4 cut(s) 88, 494, 619, 988
TseFI GTSAC 2 cut(s) 14, 1801
TseI GCWGC 1 cut(s) 593
Tsp45I GTSAC 2 cut(s) 14, 1801
TspGWI ACGGA 5 cut(s) 374, 561, 729, 1032, 1544
TspRI CASTG 4 cut(s) 88, 494, 619, 988
VpaK11BI GGWCC 2 cut(s) 737, 1498
XapI RAATTY 9 cut(s) 211, 308, 607, 683, 1005, 1112, 1214, 1265, 1523
XbaI TCTAGA 1 cut(s) 1433
XceI RCATGY 2 cut(s) 1337, 1650
XhoI CTCGAG 1 cut(s) 658
XmiI GTMKAC 1 cut(s) 1376
XmnI GAANNNNTTC 2 cut(s) 192, 567
XspI CTAG 3 cut(s) 63, 254, 1434
ZrmI AGTACT 1 cut(s) 94
Zsp2I ATGCAT 1 cut(s) 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.