Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000052

Physical Location & Seq

Genomic Coordinates Forward (+)

67175271 .. 67182204

Gene Structure 6934 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G041210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGATGATGCAAATGCTAGTTCATCAAATGACCTTCATTTTGCTGTCATCCATATGCCGCGCAAGTACTGCTGCACCACAGACGGCTAAGCTTGGTTGCCCAGAGACGTGTGGAAATGTTATCATCCCGTACCCTTTCGGGTTTGGACCTAATGAAAGTTGTTACTATGACGAATGGTTTCAAATCGACTGCAACAAATCTACCGAGGGGAAGCCTTTCTTGAGGCGTACCAAATTGGAGGTGCGGAATATATCTACCGACGGAAGGCTTCAGGTGTACAGCCCCGTTACATTCTTCTGCGAGGGAATTAATAATAGCCAAGCGGCGAATTTAAGCGACAGCCCTTTCGTCTACTCTCAGAGTGACAACATGTTCACTGCAGTGAGTTGCAATTTCTTTGCCATGTTGAGTTCCGCAGACTTTGTCGTTGGCGGATGCAGGTCAGTGTGTGTTAAAGATTGTGAATACCTGCGTTGCGATATCGGTAATAACTGTTGTCAGACTAGTATTCCTCCATACCTCACTATTGCGGATGCTACCTTATTAATTGATCAAGGAGGGTCAGAATACGACAGATCCAGTCATCTAGATTGCAATAAGTTTGCCTTCGTGGTTGACAAATATTGGTTTCAGTACGGAAACTATTCAACGCCAACAATTTCTGACATGAAGAGTATGCGCAAGGCGAAAATGTTCACCCGGTCAGTTCCTGTGACACTAGACTGGAGCATAAACAACCACACTGGGCCATTTGATTTTGACAGGTCCATTGTTTTTGTTAACGGGTCCACTGAAAATAATGGGTTTCCGTATCGAGTTAATCGGTTCCCACGGCATCCGTCTTGCATCGTCTACCCTTCTCGCGCATTCAATTGGTCACTAATTTCTTGTTACTGCCCCCCGGGCTACGAGGGAAATCCGTATCTCGGGCTATATTCTTGTGATGACATTGATGAATGCCAAGATTCTCACCGCCCACGCTGTGGCAACAACAAGTGCGTGAACTTGTATGGTTCATACCGATGTGACGACCGAAGAAAGGCTAAATTGATCCTTGCCACAGGTTTGAGCTCGAGCCTTGGACTATTATTGTTGCTTATTGGTGTATGGTTTGGATACAAACTCCTAAAGAAAAAGAATGAGATAAAACGAAAAAAGATGTTCTTCAAGCGAAATGGTGGTTTATTATTAGAACAACAATTATTGTCAGGTGAAGTTAATGTAGAGAAAATTAAATTGTTCAAATCACAGGAGTTAGAGAAGTCTACCGATAATTTTAATGTGGATAGAATTCTTGGCCAAGGAGGTCAAGGTACTGTATACAAAGGCATGTTGGAGGACGGGAGAATTGTTGCTGTGAAGAAGTCTAAAATAGTTGATGAAAGCCAACTTTCAGAATTCATCAATGAGGTTGTCATTCTTTCCCAAATCAACCATAGAAATGTGGTTCAACTATTGGGTTGTTGTTTAGAGACAGAAGTTCCTCTTTTGGTTTATGAATTTATACCAAATGGAACCCTTTCCAAGTATATTACAGAGCAGGTTGAAGACTTTCCACTCACATGGAAAATGCGCTTACGAATTGCCACAGAAATTGCAGGAGCTCTCTCGTACTTACACTATGCAGCTTCCTTTCCAATTTATCATAGAGATATCAAGTCTACAAACATACTCTTAGATGATAAGTACAGAGCAAAAGTTGCTGACTTTGGAACTTCGAGATCAATTGCTATTGACCAAACTCACCTGACCACATCACTTGTACATGGCACGTTCGGTTACTTGGACCTTGAATACTTTCAGTCAAGCCAATTTACAGAGAAAAGTGATGTGTATAGCTTTGGGGTTGTTCTTGTTGAGCTCTTAACAGGACAAAAACCAATTTCTTTTCTAAGGTCAGAGGATGAAGGCAGAAGTCTTGCCACATATTTCATTATTTCCATGCACAAAGAACGTCTATTTGAAATTGTTGATGCTCAAGTTTTGAAGGAAGGATCGAAAGAAGATATTATAATAGTGGCAAACCTTGCAAGAAGATGTCTGAATTTGAATGGAAGGAAGCGCCCTACAATGAGAGAGGTCACAGCTGAGTTAGAAGTGATTCAAATGACAGAAAAGACTTCTAATGGAGAACAAAACTATGAAGAGGTTGAATTTGTCAGAACTGAACCAGTCGAGCCATGGGATATTGCTTCAAGTTCAACAGGAACAGGATCAGCTTTGGATGTTGGTCGGGTTTCATCATTCCATGAAATCCCCCTATTATCTTTCAAGTCAAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

760

Amino Acids

85.95

Weight (kDa)

6.36

Isoelectric Point (pI)

39.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	33 - 89	5.2e-12	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	426 - 695	5.6e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	428 - 698	8.7e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000052)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca	FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica	MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica	Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis	pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis	RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata	RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora	Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii	Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa	Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha	Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana	Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2012
Acc16I	TGCGCA	1 cut(s)	680
Acc36I	ACCTGC	3 cut(s)	429, 477, 1531
AccB7I	CCANNNNNTGG	1 cut(s)	983
AccI	GTMKAC	5 cut(s)	351, 852, 1265, 1320, 1661
AccII	CGCG	2 cut(s)	60, 864
AciI	CCGC	7 cut(s)	58, 244, 323, 414, 432, 530, 973
AclWI	GGATC	4 cut(s)	570, 1045, 2002, 2221
AcoI	YGGCCR	1 cut(s)	1297
AcsI	RAATTY	6 cut(s)	328, 1290, 1397, 1499, 2044, 2153
AcuI	CTGAAG	1 cut(s)	254
AdeI	CACNNNGTG	1 cut(s)	983
AfaI	GTAC	9 cut(s)	67, 131, 229, 278, 635, 1315, 1613, 1688, 1764
AfiI	CCNNNNNNNGG	4 cut(s)	264, 926, 983, 1039
AflIII	ACRYGT	2 cut(s)	107, 369
AhlI	ACTAGT	1 cut(s)	503
AjiI	CACGTC	1 cut(s)	108
AleI	CACNNNNGTG	1 cut(s)	380
AluBI	AGCT	8 cut(s)	91, 1071, 1604, 1628, 1839, 1861, 2087, 2219
AluI	AGCT	8 cut(s)	91, 1071, 1604, 1628, 1839, 1861, 2087, 2219
Alw21I	GWGCWC	3 cut(s)	1073, 1606, 1863
Alw26I	GTCTC	2 cut(s)	98, 1466
AlwI	GGATC	4 cut(s)	570, 1045, 2002, 2221
AlwNI	CAGNNNCTG	1 cut(s)	710
Ama87I	CYCGRG	3 cut(s)	901, 926, 1072
AoxI	GGCC	2 cut(s)	746, 1297
ApeKI	GCWGC	2 cut(s)	71, 1625
ApoI	RAATTY	6 cut(s)	328, 1290, 1397, 1499, 2044, 2153
ArsI	GACNNNNNNTTYG	4 cut(s)	22, 54, 329, 361
AseI	ATTAAT	2 cut(s)	309, 545
Asp700I	GAANNNNTTC	8 cut(s)	177, 215, 643, 692, 1519, 1551, 1797, 2100
AspLEI	GCGC	5 cut(s)	62, 681, 866, 1575, 2064
AspS9I	GGNCC	5 cut(s)	146, 746, 765, 786, 1786
AsuC2I	CCSGG	3 cut(s)	700, 902, 903
AsuHPI	GGTGA	4 cut(s)	688, 962, 1223, 1736
AvaI	CYCGRG	3 cut(s)	901, 926, 1072
AvaII	GGWCC	4 cut(s)	146, 765, 786, 1786
BalI	TGGCCA	1 cut(s)	1299
BanII	GRGCYC	3 cut(s)	1073, 1606, 1863
BbsI	GAAGAC	1 cut(s)	1554
Bbv12I	GWGCWC	3 cut(s)	1073, 1606, 1863
BbvI	GCAGC	2 cut(s)	58, 1637
BceAI	ACGGC	2 cut(s)	99, 848
BciVI	GTATCC	1 cut(s)	1109
BclI	TGATCA	1 cut(s)	550
BcnI	CCSGG	3 cut(s)	700, 902, 903
BcoDI	GTCTC	2 cut(s)	98, 1466
BcuI	ACTAGT	1 cut(s)	503
BfaI	CTAG	4 cut(s)	17, 504, 587, 719
BfmI	CTRYAG	1 cut(s)	378
BfoI	RGCGCY	1 cut(s)	2065
BfuAI	ACCTGC	3 cut(s)	429, 477, 1531
BfuI	GTATCC	1 cut(s)	1109
BglI	GCCNNNNNGGC	1 cut(s)	903
BisI	GCNGC	4 cut(s)	58, 72, 324, 1626
BlpI	GCTNAGC	1 cut(s)	87
BlsI	GCNGC	4 cut(s)	59, 73, 325, 1627
BmcAI	AGTACT	1 cut(s)	67
Bme1390I	CCNGG	3 cut(s)	700, 902, 903
Bme18I	GGWCC	4 cut(s)	146, 765, 786, 1786
BmeT110I	CYCGRG	3 cut(s)	901, 926, 1072
BmgBI	CACGTC	1 cut(s)	108
BmgT120I	GGNCC	5 cut(s)	146, 746, 765, 786, 1786
BmiI	GGNNCC	3 cut(s)	787, 827, 1516
BmrFI	CCNGG	3 cut(s)	700, 902, 903
BmrI	ACTGGG	1 cut(s)	753
BmsI	GCATC	5 cut(s)	425, 523, 844, 855, 1963
BmuI	ACTGGG	1 cut(s)	753
BpiI	GAAGAC	1 cut(s)	1554
BpmI	CTGGAG	1 cut(s)	745
Bpu1102I	GCTNAGC	1 cut(s)	87
BpuEI	CTTGAG	2 cut(s)	241, 1962
BpuMI	CCSGG	3 cut(s)	700, 902, 903
BsaJI	CCNNGG	7 cut(s)	204, 830, 900, 901, 1078, 1300, 2180
Bsc4I	CCNNNNNNNGG	4 cut(s)	264, 926, 983, 1039
Bse1I	ACTGG	4 cut(s)	579, 728, 748, 2171
BseDI	CCNNGG	7 cut(s)	204, 830, 900, 901, 1078, 1300, 2180
BseGI	GGATG	7 cut(s)	47, 123, 440, 538, 835, 1909, 2230
BseLI	CCNNNNNNNGG	4 cut(s)	264, 926, 983, 1039
BseMII	CTCAG	2 cut(s)	371, 2079
BseNI	ACTGG	4 cut(s)	579, 728, 748, 2171
BseXI	GCAGC	2 cut(s)	58, 1637
BsgI	GTGCAG	1 cut(s)	57
Bsh1236I	CGCG	2 cut(s)	60, 864
Bsh1285I	CGRYCG	1 cut(s)	1033
BshFI	GGCC	2 cut(s)	748, 1299
BsiEI	CGRYCG	1 cut(s)	1033
BsiHKAI	GWGCWC	3 cut(s)	1073, 1606, 1863
BsiHKCI	CYCGRG	3 cut(s)	901, 926, 1072
BsiSI	CCGG	2 cut(s)	700, 902
BslI	CCNNNNNNNGG	4 cut(s)	264, 926, 983, 1039
BsmAI	GTCTC	2 cut(s)	98, 1466
BsmBI	CGTCTC	1 cut(s)	98
BsmI	GAATGC	2 cut(s)	866, 962
BsnI	GGCC	2 cut(s)	748, 1299
BsoBI	CYCGRG	3 cut(s)	901, 926, 1072
Bsp1286I	GDGCHC	3 cut(s)	1073, 1606, 1863
Bsp1407I	TGTACA	2 cut(s)	276, 1762
Bsp143I	GATC	6 cut(s)	550, 575, 1050, 1721, 1994, 2213
Bsp1720I	GCTNAGC	1 cut(s)	87
Bsp19I	CCATGG	1 cut(s)	2180
BspACI	CCGC	7 cut(s)	58, 244, 323, 414, 432, 530, 973
BspANI	GGCC	2 cut(s)	748, 1299
BspCNI	CTCAG	2 cut(s)	370, 2080
BspFNI	CGCG	2 cut(s)	60, 864
BspLI	GGNNCC	3 cut(s)	787, 827, 1516
BspMAI	CTGCAG	1 cut(s)	382
BspMI	ACCTGC	3 cut(s)	429, 477, 1531
BspPI	GGATC	4 cut(s)	570, 1045, 2002, 2221
BsrGI	TGTACA	2 cut(s)	276, 1762
BsrI	ACTGG	4 cut(s)	579, 728, 748, 2171
BssECI	CCNNGG	7 cut(s)	204, 830, 900, 901, 1078, 1300, 2180
BssMI	GATC	6 cut(s)	550, 575, 1050, 1721, 1994, 2213
BssNAI	GTATAC	1 cut(s)	1321
BssT1I	CCWWGG	3 cut(s)	1078, 1300, 2180
Bst1107I	GTATAC	1 cut(s)	1321
Bst4CI	ACNGT	2 cut(s)	494, 1318
Bst6I	CTCTTC	2 cut(s)	665, 2139
BstAPI	GCANNNNNTGC	3 cut(s)	68, 1700, 2027
BstAUI	TGTACA	2 cut(s)	276, 1762
BstDEI	CTNAG	5 cut(s)	87, 357, 1675, 1892, 2088
BstDSI	CCRYGG	2 cut(s)	830, 2180
BstF5I	GGATG	7 cut(s)	47, 123, 440, 538, 835, 1909, 2230
BstFNI	CGCG	2 cut(s)	60, 864
BstH2I	RGCGCY	1 cut(s)	2065
BstHHI	GCGC	5 cut(s)	62, 681, 866, 1575, 2064
BstKTI	GATC	6 cut(s)	553, 578, 1053, 1724, 1997, 2216
BstMAI	GTCTC	2 cut(s)	98, 1466
BstMBI	GATC	6 cut(s)	550, 575, 1050, 1721, 1994, 2213
BstMCI	CGRYCG	1 cut(s)	1033
BstMWI	GCNNNNNNNGC	4 cut(s)	68, 903, 1700, 2027
BstNSI	RCATGY	2 cut(s)	373, 1333
BstSCI	CCNGG	3 cut(s)	698, 900, 901
BstSFI	CTRYAG	1 cut(s)	378
BstUI	CGCG	2 cut(s)	60, 864
BstV1I	GCAGC	2 cut(s)	58, 1637
BstV2I	GAAGAC	1 cut(s)	1554
BstX2I	RGATCY	1 cut(s)	575
BstXI	CCANNNNNNTGG	1 cut(s)	1563
BstYI	RGATCY	1 cut(s)	575
BstZ17I	GTATAC	1 cut(s)	1321
BsuI	GTATCC	1 cut(s)	1109
BsuRI	GGCC	2 cut(s)	748, 1299
BtgI	CCRYGG	2 cut(s)	830, 2180
BtrI	CACGTC	1 cut(s)	108
BtsCI	GGATG	7 cut(s)	47, 123, 440, 538, 835, 1909, 2230
BtsI	GCAGTG	2 cut(s)	375, 387
BtsIMutI	CAGTG	5 cut(s)	375, 387, 450, 741, 789
BveI	ACCTGC	3 cut(s)	429, 477, 1531
CaiI	CAGNNNCTG	1 cut(s)	710
CfoI	GCGC	5 cut(s)	62, 681, 866, 1575, 2064
Cfr13I	GGNCC	5 cut(s)	146, 746, 765, 786, 1786
Cfr9I	CCCGGG	1 cut(s)	901
Csp6I	GTAC	9 cut(s)	66, 130, 228, 277, 634, 1314, 1612, 1687, 1763
CspCI	CAANNNNNGTGG	4 cut(s)	1576, 1611, 1741, 1776
CviAII	CATG	9 cut(s)	370, 403, 667, 1330, 1563, 1766, 1942, 2181, 2249
CviQI	GTAC	9 cut(s)	66, 130, 228, 277, 634, 1314, 1612, 1687, 1763
DdeI	CTNAG	5 cut(s)	87, 357, 1675, 1892, 2088
DpnI	GATC	6 cut(s)	552, 577, 1052, 1723, 1996, 2215
DpnII	GATC	6 cut(s)	550, 575, 1050, 1721, 1994, 2213
DraIII	CACNNNGTG	1 cut(s)	983
EaeI	YGGCCR	1 cut(s)	1297
Eam1104I	CTCTTC	2 cut(s)	665, 2139
EarI	CTCTTC	2 cut(s)	665, 2139
EciI	GGCGGA	1 cut(s)	447
Ecl136II	GAGCTC	3 cut(s)	1071, 1604, 1861
Eco130I	CCWWGG	3 cut(s)	1078, 1300, 2180
Eco24I	GRGCYC	3 cut(s)	1073, 1606, 1863
Eco32I	GATATC	2 cut(s)	481, 1654
Eco47I	GGWCC	4 cut(s)	146, 765, 786, 1786
Eco53kI	GAGCTC	3 cut(s)	1071, 1604, 1861
Eco57I	CTGAAG	1 cut(s)	254
Eco88I	CYCGRG	3 cut(s)	901, 926, 1072
EcoICRI	GAGCTC	3 cut(s)	1071, 1604, 1861
EcoRI	GAATTC	2 cut(s)	1290, 1397
EcoRV	GATATC	2 cut(s)	481, 1654
EcoT14I	CCWWGG	3 cut(s)	1078, 1300, 2180
EcoT38I	GRGCYC	3 cut(s)	1073, 1606, 1863
ErhI	CCWWGG	3 cut(s)	1078, 1300, 2180
Esp3I	CGTCTC	1 cut(s)	98
FaeI	CATG	9 cut(s)	373, 406, 670, 1333, 1566, 1769, 1945, 2184, 2252
FalI	AAGNNNNNCTT	8 cut(s)	203, 235, 590, 622, 1148, 1180, 1470, 1502
FatI	CATG	9 cut(s)	369, 402, 666, 1329, 1562, 1765, 1941, 2180, 2248
FauNDI	CATATG	1 cut(s)	53
FbaI	TGATCA	1 cut(s)	550
FblI	GTMKAC	5 cut(s)	351, 852, 1265, 1320, 1661
Fnu4HI	GCNGC	4 cut(s)	58, 72, 324, 1626
FokI	GGATG	7 cut(s)	34, 110, 447, 545, 822, 1916, 2237
FriOI	GRGCYC	3 cut(s)	1073, 1606, 1863
Fsp4HI	GCNGC	4 cut(s)	58, 72, 324, 1626
FspBI	CTAG	4 cut(s)	17, 504, 587, 719
FspI	TGCGCA	1 cut(s)	680
GlaI	GCGC	5 cut(s)	61, 680, 865, 1574, 2063
GluI	GCNGC	4 cut(s)	58, 72, 324, 1626
GsuI	CTGGAG	1 cut(s)	745
HaeII	RGCGCY	1 cut(s)	2065
HaeIII	GGCC	2 cut(s)	748, 1299
HapII	CCGG	2 cut(s)	700, 902
HhaI	GCGC	5 cut(s)	62, 681, 866, 1575, 2064
Hin1II	CATG	9 cut(s)	373, 406, 670, 1333, 1566, 1769, 1945, 2184, 2252
Hin6I	GCGC	5 cut(s)	60, 679, 864, 1573, 2062
HinP1I	GCGC	5 cut(s)	60, 679, 864, 1573, 2062
HincII	GTYRAC	2 cut(s)	616, 781
HindII	GTYRAC	2 cut(s)	616, 781
HindIII	AAGCTT	1 cut(s)	89
HinfI	GANTC	2 cut(s)	965, 2101
HpaI	GTTAAC	1 cut(s)	781
HpaII	CCGG	2 cut(s)	700, 902
HphI	GGTGA	4 cut(s)	688, 962, 1223, 1736
Hpy188I	TCNGA	8 cut(s)	360, 501, 565, 664, 1396, 1900, 2043, 2162
Hpy188III	TCNNGA	3 cut(s)	220, 587, 1719
Hpy99I	CGWCG	1 cut(s)	263
HpyAV	CCTTC	8 cut(s)	43, 258, 616, 867, 1901, 1981, 1985, 2049
HpyCH4III	ACNGT	2 cut(s)	494, 1318
HpyCH4IV	ACGT	3 cut(s)	107, 1772, 1954
HpyF10VI	GCNNNNNNNGC	4 cut(s)	68, 903, 1700, 2027
HpyF3I	CTNAG	5 cut(s)	87, 357, 1675, 1892, 2088
HpySE526I	ACGT	3 cut(s)	107, 1772, 1954
Hsp92II	CATG	9 cut(s)	373, 406, 670, 1333, 1566, 1769, 1945, 2184, 2252
HspAI	GCGC	5 cut(s)	60, 679, 864, 1573, 2062
Ksp22I	TGATCA	1 cut(s)	550
KspAI	GTTAAC	1 cut(s)	781
Kzo9I	GATC	6 cut(s)	550, 575, 1050, 1721, 1994, 2213
LmnI	GCTCC	2 cut(s)	726, 1601
Lsp1109I	GCAGC	2 cut(s)	58, 1637
LweI	GCATC	5 cut(s)	425, 523, 844, 855, 1963
MaeI	CTAG	4 cut(s)	17, 504, 587, 719
MaeII	ACGT	3 cut(s)	107, 1772, 1954
MaeIII	GTNAC	9 cut(s)	161, 286, 362, 712, 876, 890, 1025, 1778, 2080
MalI	GATC	6 cut(s)	552, 577, 1052, 1723, 1996, 2215
MboI	GATC	6 cut(s)	550, 575, 1050, 1721, 1994, 2213
MboII	GAAGA	9 cut(s)	286, 682, 1047, 1156, 1372, 1559, 2015, 2046, 2156
MfeI	CAATTG	2 cut(s)	871, 1725
MflI	RGATCY	1 cut(s)	575
MhlI	GDGCHC	3 cut(s)	1073, 1606, 1863
MlsI	TGGCCA	1 cut(s)	1299
MluNI	TGGCCA	1 cut(s)	1299
MmeI	TCCRAC	1 cut(s)	1314
Mox20I	TGGCCA	1 cut(s)	1299
MroXI	GAANNNNTTC	8 cut(s)	177, 215, 643, 692, 1519, 1551, 1797, 2100
MscI	TGGCCA	1 cut(s)	1299
MslI	CAYNNNNRTG	5 cut(s)	52, 380, 1021, 1440, 1561
Msp20I	TGGCCA	1 cut(s)	1299
MspA1I	CMGCKG	1 cut(s)	2087
MspI	CCGG	2 cut(s)	700, 902
MspR9I	CCNGG	3 cut(s)	700, 902, 903
MunI	CAATTG	2 cut(s)	871, 1725
Mva1269I	GAATGC	2 cut(s)	866, 962
MvnI	CGCG	2 cut(s)	60, 864
MwoI	GCNNNNNNNGC	4 cut(s)	68, 903, 1700, 2027
NciI	CCSGG	3 cut(s)	700, 902, 903
NcoI	CCATGG	1 cut(s)	2180
NdeI	CATATG	1 cut(s)	53
NdeII	GATC	6 cut(s)	550, 575, 1050, 1721, 1994, 2213
NlaIII	CATG	9 cut(s)	373, 406, 670, 1333, 1566, 1769, 1945, 2184, 2252
NlaIV	GGNNCC	3 cut(s)	787, 827, 1516
NmuCI	GTSAC	5 cut(s)	362, 712, 876, 1025, 2080
NsbI	TGCGCA	1 cut(s)	680
NspI	RCATGY	2 cut(s)	373, 1333
OliI	CACNNNNGTG	1 cut(s)	380
PaeR7I	CTCGAG	1 cut(s)	1072
PciI	ACATGT	1 cut(s)	369
PctI	GAATGC	2 cut(s)	866, 962
PdmI	GAANNNNTTC	8 cut(s)	177, 215, 643, 692, 1519, 1551, 1797, 2100
PfeI	GAWTC	2 cut(s)	965, 2101
PflFI	GACNNNGTC	1 cut(s)	422
PflMI	CCANNNNNTGG	1 cut(s)	983
PkrI	GCNGC	4 cut(s)	59, 73, 325, 1627
PscI	ACATGT	1 cut(s)	369
PshBI	ATTAAT	2 cut(s)	309, 545
PsiI	TTATAA	1 cut(s)	2012
Psp124BI	GAGCTC	3 cut(s)	1073, 1606, 1863
PspN4I	GGNNCC	3 cut(s)	787, 827, 1516
PspPI	GGNCC	5 cut(s)	146, 746, 765, 786, 1786
PspXI	VCTCGAGB	1 cut(s)	1072
PstI	CTGCAG	1 cut(s)	382
PstNI	CAGNNNCTG	1 cut(s)	710
PsuI	RGATCY	1 cut(s)	575
PsyI	GACNNNGTC	1 cut(s)	422
PvuII	CAGCTG	1 cut(s)	2087
RsaI	GTAC	9 cut(s)	67, 131, 229, 278, 635, 1315, 1613, 1688, 1764
RsaNI	GTAC	9 cut(s)	66, 130, 228, 277, 634, 1314, 1612, 1687, 1763
RseI	CAYNNNNRTG	5 cut(s)	52, 380, 1021, 1440, 1561
SacI	GAGCTC	3 cut(s)	1073, 1606, 1863
SatI	GCNGC	4 cut(s)	58, 72, 324, 1626
Sau3AI	GATC	6 cut(s)	550, 575, 1050, 1721, 1994, 2213
Sau96I	GGNCC	5 cut(s)	146, 746, 765, 786, 1786
ScaI	AGTACT	1 cut(s)	67
ScrFI	CCNGG	3 cut(s)	700, 902, 903
SduI	GDGCHC	3 cut(s)	1073, 1606, 1863
SfaNI	GCATC	5 cut(s)	425, 523, 844, 855, 1963
SfcI	CTRYAG	1 cut(s)	378
Sfr274I	CTCGAG	1 cut(s)	1072
SinI	GGWCC	4 cut(s)	146, 765, 786, 1786
SlaI	CTCGAG	1 cut(s)	1072
SmaI	CCCGGG	1 cut(s)	903
SmiMI	CAYNNNNRTG	5 cut(s)	52, 380, 1021, 1440, 1561
SmlI	CTYRAG	3 cut(s)	220, 1072, 1977
SmoI	CTYRAG	3 cut(s)	220, 1072, 1977
SpeI	ACTAGT	1 cut(s)	503
SsiI	CCGC	7 cut(s)	58, 244, 323, 414, 432, 530, 973
SspI	AATATT	1 cut(s)	623
SspMI	CTAG	4 cut(s)	17, 504, 587, 719
SstI	GAGCTC	3 cut(s)	1073, 1606, 1863
StyD4I	CCNGG	3 cut(s)	698, 900, 901
StyI	CCWWGG	3 cut(s)	1078, 1300, 2180
TaaI	ACNGT	2 cut(s)	494, 1318
TaiI	ACGT	3 cut(s)	110, 1775, 1957
TaqI	TCGA	6 cut(s)	186, 814, 1073, 1718, 1997, 2175
TaqII	GACCGA	1 cut(s)	1047
TatI	WGTACW	4 cut(s)	65, 276, 1686, 1762
TauI	GCSGC	2 cut(s)	60, 326
TfiI	GAWTC	2 cut(s)	965, 2101
TscAI	CASTG	5 cut(s)	382, 387, 450, 748, 796
TseFI	GTSAC	5 cut(s)	362, 712, 876, 1025, 2080
TseI	GCWGC	2 cut(s)	71, 1625
Tsp45I	GTSAC	5 cut(s)	362, 712, 876, 1025, 2080
TspGWI	ACGGA	5 cut(s)	276, 651, 798, 828, 909
TspMI	CCCGGG	1 cut(s)	901
TspRI	CASTG	5 cut(s)	382, 387, 450, 748, 796
Tth111I	GACNNNGTC	1 cut(s)	422
Van91I	CCANNNNNTGG	1 cut(s)	983
VpaK11BI	GGWCC	4 cut(s)	146, 765, 786, 1786
VspI	ATTAAT	2 cut(s)	309, 545
XapI	RAATTY	6 cut(s)	328, 1290, 1397, 1499, 2044, 2153
XbaI	TCTAGA	1 cut(s)	586
XceI	RCATGY	2 cut(s)	373, 1333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2178
XhoI	CTCGAG	1 cut(s)	1072
XmaI	CCCGGG	1 cut(s)	901
XmiI	GTMKAC	5 cut(s)	351, 852, 1265, 1320, 1661
XmnI	GAANNNNTTC	8 cut(s)	177, 215, 643, 692, 1519, 1551, 1797, 2100
XspI	CTAG	4 cut(s)	17, 504, 587, 719
ZrmI	AGTACT	1 cut(s)	67

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.