Rh2AG497200

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
71884145 .. 71904096
19952 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG497200.1

Sequence Viewer

Length: 1602 bp
ATGGGCAAGGTTGACCCGTCTTGCTATGTTACCACTTCTCCCTCAGTCAAACGGCCGGAAATTTATTGTTCATGCCGCGAGGGGTTCGAAGGAAATCCGTATCTCGGGGAAAAATCTTGTGATGATATTAATGAATGCCAAGATGGTCGCCGCCGATGCTTTGGCAACAGCAAGTGCGTGAACGACTTCTATAGATCATACTTGTTCCATCTGCTTAGTCCAGAAGAATTAATGATGATGCAAATTCCAGTTCATCAAATGATATTCATTTTGCTGTTATCCATATGCCGCGCAAGTACTGCTGCACTACAGATGGCAATAGGTGATTGCCCAACGGAGTGTGGAGACGTTATCATCCCGTACCCTTTCGGGATTGGACCTAATGCAAGTTGTTACTATGACGAATGGTTTCAGATCGACTGCAACGAATCGACCAAAGGGAAGCCTTTCTTGACGCGTACCAAATTGGAGGTGCTGAATATATCTACCGAAGGAAGGCTTCAGGTGTACAGCCCCGTTACATTCTTCTGCGAGGGAAATGATAGTAGCCAAGCGGCGGATTTAAGGGACAGCCCTTTCGTCTACTCTCAAAGCTACAACATATTCACTGCAGTGAGTTGCAATTCCTTTGCCTCGTTGAGTTCCGCAGACTTTGTTGTTGGCGGATGCAGGTCAGTGTGTGATCAAGATTCTGACTACCTGAGTTGCGATATCGGTATTAACTGTTGTCAGACTAGTATTCCTCCATACCTCACTGTTATTAATGCTACCTTATCTGAGAGTACCACAAATTGCAGTAAGTTTGCCTTCCTGGTTGACAAAGATTGGTTTGGGAACAGCACCACTTCATCATCAACAATTTCTGACATTACAGCTACCATGAAGAGTATGCGCAAGGTTCCTGTAGCACTAGACTGGAGCATAAACAACCACACTAGGCAATTTGATTCATTTAACAAGTTCATTGTTGATCGTCATCAGTATCAACTCAATATGTATAATTACTACATTAATTTCTCAACGATTTGGGACCCGTCTTGCTATATTTACACTTCGCGTGCAGTCGACTGGTCTGAAATTTATTGTTCCTGCAGCAGTGGTTTCGAAGGAAATCCGTATCTCGGAGAAGATTCTTGTTATGACATTGATGAATGCCAGGATGCTTACGCATGCTTTGGCCACACCAAGTGTGTGAACGAGTATGGTTGGTACCGATGTGAGGACGACCGGAGAAAGGCTAAATGGATCCTTGCCGCAGACAAAGCGAGGAAGAAGAGGACCGTCAGAGATGGATTCGTCAATAGGGTCAAGAAGCGGTGCGAACGAAGGGCGGGGGTGGGTTTGGAGTCAGATAAGGATTTGGTCCATGCGGTGACGATACTGAGCTTGGGCAACGACGATAGGTTGACTCATCGGAATTTGCTCGATGCTACCACAGACCCAATCCTTTCTCTTCCTCCATGCCGCAACCAGAGACTTGGAAACTGTGGTGGTCGACTGCGGTGGTCAAAGTACGGTCGTCGACTGCGGTTAGTCAAGTCATTTAAACCGCTCAAATGTTGTCGTATTCCTCATGCAACCCTCTATTGCGCATCAATTTAG

Protein Analysis

533

Amino Acids

60.4

Weight (kDa)

6.69

Isoelectric Point (pI)

49.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 110 - 167 1.8e-12 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 893, 1591
Acc36I ACCTGC 1 cut(s) 660
Acc65I GGTACC 1 cut(s) 1209
AccB1I GGYRCC 1 cut(s) 1209
AccBSI CCGCTC 1 cut(s) 1552
AccI GTMKAC 4 cut(s) 582, 1065, 1495, 1522
AccII CGCG 4 cut(s) 78, 291, 457, 1057
AclWI GGATC 2 cut(s) 1240, 1253
AcoI YGGCCR 2 cut(s) 53, 1177
AcsI RAATTY 4 cut(s) 60, 243, 1077, 1417
AcuI CTGAAG 1 cut(s) 485
AdeI CACNNNGTG 1 cut(s) 1188
AfaI GTAC 7 cut(s) 298, 362, 460, 509, 784, 1211, 1514
AfiI CCNNNNNNNGG 6 cut(s) 104, 495, 556, 1121, 1219, 1234
AflIII ACRYGT 1 cut(s) 455
AhlI ACTAGT 1 cut(s) 734
AjnI CCWGG 2 cut(s) 810, 1155
AleI CACNNNNGTG 1 cut(s) 611
AluBI AGCT 3 cut(s) 594, 875, 1386
AluI AGCT 3 cut(s) 594, 875, 1386
Alw26I GTCTC 2 cut(s) 339, 1468
AlwI GGATC 2 cut(s) 1240, 1253
Ama87I CYCGRG 1 cut(s) 104
AoxI GGCC 2 cut(s) 53, 1177
ApeKI GCWGC 2 cut(s) 302, 1092
ApoI RAATTY 4 cut(s) 60, 243, 1077, 1417
ArsI GACNNNNNNTTYG 2 cut(s) 560, 592
AseI ATTAAT 4 cut(s) 129, 230, 762, 1011
Asp700I GAANNNNTTC 3 cut(s) 185, 408, 446
Asp718I GGTACC 1 cut(s) 1209
AspLEI GCGC 3 cut(s) 293, 894, 1592
AspS9I GGNCC 4 cut(s) 377, 1030, 1278, 1363
AsuHPI GGTGA 2 cut(s) 335, 1384
AsuII TTCGAA 2 cut(s) 87, 1104
AvaI CYCGRG 1 cut(s) 104
AvaII GGWCC 4 cut(s) 377, 1030, 1278, 1363
BaeI ACNNNNGTAYC 2 cut(s) 1201, 1234
BalI TGGCCA 1 cut(s) 1179
BamHI GGATCC 1 cut(s) 1245
BanI GGYRCC 1 cut(s) 1209
BbvI GCAGC 2 cut(s) 289, 1104
BccI CCATC 4 cut(s) 137, 216, 307, 1283
BceAI ACGGC 1 cut(s) 68
BcgI CGANNNNNNTGC 2 cut(s) 1084, 1118
BciT130I CCWGG 2 cut(s) 812, 1157
BclI TGATCA 1 cut(s) 682
BcoDI GTCTC 2 cut(s) 339, 1468
BcuI ACTAGT 1 cut(s) 734
BfaI CTAG 3 cut(s) 735, 911, 936
BfmI CTRYAG 5 cut(s) 190, 308, 609, 903, 1090
BfuAI ACCTGC 1 cut(s) 660
BisI GCNGC 8 cut(s) 76, 151, 289, 303, 555, 1093, 1254, 1465
BlsI GCNGC 8 cut(s) 77, 152, 290, 304, 556, 1094, 1255, 1466
BmcAI AGTACT 1 cut(s) 298
Bme1390I CCNGG 2 cut(s) 812, 1157
Bme18I GGWCC 4 cut(s) 377, 1030, 1278, 1363
BmeT110I CYCGRG 1 cut(s) 104
BmgT120I GGNCC 4 cut(s) 377, 1030, 1278, 1363
BmiI GGNNCC 5 cut(s) 900, 1031, 1032, 1211, 1247
BmrFI CCNGG 2 cut(s) 812, 1157
BmsI GCATC 5 cut(s) 146, 228, 656, 1150, 1417
BpmI CTGGAG 1 cut(s) 937
Bpu14I TTCGAA 2 cut(s) 87, 1104
BsaBI GATNNNNATC 1 cut(s) 975
BsaWI WCCGGW 1 cut(s) 1227
BsaXI ACNNNNNCTCC 2 cut(s) 22, 52
Bsc4I CCNNNNNNNGG 6 cut(s) 104, 495, 556, 1121, 1219, 1234
Bse1I ACTGG 3 cut(s) 248, 920, 1073
Bse8I GATNNNNATC 1 cut(s) 975
BseBI CCWGG 2 cut(s) 812, 1157
BseGI GGATG 3 cut(s) 354, 671, 1165
BseJI GATNNNNATC 1 cut(s) 975
BseLI CCNNNNNNNGG 6 cut(s) 104, 495, 556, 1121, 1219, 1234
BseMII CTCAG 4 cut(s) 57, 692, 768, 1373
BseNI ACTGG 3 cut(s) 248, 920, 1073
BseX3I CGGCCG 1 cut(s) 53
BseXI GCAGC 2 cut(s) 289, 1104
BsgI GTGCAG 2 cut(s) 288, 1080
Bsh1236I CGCG 4 cut(s) 78, 291, 457, 1057
Bsh1285I CGRYCG 3 cut(s) 56, 1228, 1519
BshFI GGCC 2 cut(s) 55, 1179
BshNI GGYRCC 1 cut(s) 1209
BsiEI CGRYCG 3 cut(s) 56, 1228, 1519
BsiHKCI CYCGRG 1 cut(s) 104
BsiSI CCGG 2 cut(s) 56, 1228
BslFI GGGAC 2 cut(s) 581, 1043
BslI CCNNNNNNNGG 6 cut(s) 104, 495, 556, 1121, 1219, 1234
BsmAI GTCTC 2 cut(s) 339, 1468
BsmBI CGTCTC 1 cut(s) 339
BsmFI GGGAC 2 cut(s) 581, 1043
BsmI GAATGC 2 cut(s) 140, 1157
BsnI GGCC 2 cut(s) 55, 1179
BsoBI CYCGRG 1 cut(s) 104
Bsp119I TTCGAA 2 cut(s) 87, 1104
Bsp1407I TGTACA 1 cut(s) 507
Bsp143I GATC 5 cut(s) 194, 414, 682, 970, 1245
BspANI GGCC 2 cut(s) 55, 1179
BspCNI CTCAG 4 cut(s) 56, 693, 769, 1374
BspFNI CGCG 4 cut(s) 78, 291, 457, 1057
BspLI GGNNCC 5 cut(s) 900, 1031, 1032, 1211, 1247
BspMAI CTGCAG 2 cut(s) 613, 1094
BspMI ACCTGC 1 cut(s) 660
BspPI GGATC 2 cut(s) 1240, 1253
BspT104I TTCGAA 2 cut(s) 87, 1104
BspT107I GGYRCC 1 cut(s) 1209
BsrBI CCGCTC 1 cut(s) 1552
BsrGI TGTACA 1 cut(s) 507
BsrI ACTGG 3 cut(s) 248, 920, 1073
BssMI GATC 5 cut(s) 194, 414, 682, 970, 1245
Bst2UI CCWGG 2 cut(s) 812, 1157
Bst4CI ACNGT 5 cut(s) 725, 757, 1282, 1487, 1517
Bst6I CTCTTC 3 cut(s) 878, 1268, 1458
BstAPI GCANNNNNTGC 1 cut(s) 299
BstAUI TGTACA 1 cut(s) 507
BstBI TTCGAA 2 cut(s) 87, 1104
BstC8I GCNNGC 2 cut(s) 1059, 1171
BstDEI CTNAG 5 cut(s) 43, 215, 701, 777, 1382
BstF5I GGATG 3 cut(s) 354, 671, 1165
BstFNI CGCG 4 cut(s) 78, 291, 457, 1057
BstHHI GCGC 3 cut(s) 293, 894, 1592
BstKTI GATC 5 cut(s) 197, 417, 685, 973, 1248
BstMAI GTCTC 2 cut(s) 339, 1468
BstMBI GATC 5 cut(s) 194, 414, 682, 970, 1245
BstMCI CGRYCG 3 cut(s) 56, 1228, 1519
BstMWI GCNNNNNNNGC 3 cut(s) 156, 299, 1262
BstNI CCWGG 2 cut(s) 812, 1157
BstNSI RCATGY 1 cut(s) 1173
BstSCI CCNGG 2 cut(s) 810, 1155
BstSFI CTRYAG 5 cut(s) 190, 308, 609, 903, 1090
BstUI CGCG 4 cut(s) 78, 291, 457, 1057
BstV1I GCAGC 2 cut(s) 289, 1104
BstX2I RGATCY 1 cut(s) 1245
BstXI CCANNNNNNTGG 1 cut(s) 1478
BstYI RGATCY 1 cut(s) 1245
BstZI CGGCCG 1 cut(s) 53
BsuRI GGCC 2 cut(s) 55, 1179
BtsCI GGATG 3 cut(s) 354, 671, 1165
BtsI GCAGTG 3 cut(s) 606, 618, 1102
BtsIMutI CAGTG 5 cut(s) 606, 618, 681, 753, 1102
BveI ACCTGC 1 cut(s) 660
Cac8I GCNNGC 2 cut(s) 1059, 1171
CfoI GCGC 3 cut(s) 293, 894, 1592
Cfr13I GGNCC 4 cut(s) 377, 1030, 1278, 1363
CseI GACGC 1 cut(s) 463
Csp6I GTAC 7 cut(s) 297, 361, 459, 508, 783, 1210, 1513
CviAII CATG 6 cut(s) 72, 880, 1170, 1367, 1461, 1574
CviQI GTAC 7 cut(s) 297, 361, 459, 508, 783, 1210, 1513
DdeI CTNAG 5 cut(s) 43, 215, 701, 777, 1382
DpnI GATC 5 cut(s) 196, 416, 684, 972, 1247
DpnII GATC 5 cut(s) 194, 414, 682, 970, 1245
DraI TTTAAA 1 cut(s) 1546
DraIII CACNNNGTG 1 cut(s) 1188
EaeI YGGCCR 2 cut(s) 53, 1177
EagI CGGCCG 1 cut(s) 53
Eam1104I CTCTTC 3 cut(s) 878, 1268, 1458
EarI CTCTTC 3 cut(s) 878, 1268, 1458
EciI GGCGGA 2 cut(s) 572, 678
EclXI CGGCCG 1 cut(s) 53
Eco32I GATATC 1 cut(s) 712
Eco47I GGWCC 4 cut(s) 377, 1030, 1278, 1363
Eco52I CGGCCG 1 cut(s) 53
Eco57I CTGAAG 1 cut(s) 485
Eco88I CYCGRG 1 cut(s) 104
EcoO109I RGGNCCY 1 cut(s) 1030
EcoRII CCWGG 2 cut(s) 810, 1155
EcoRV GATATC 1 cut(s) 712
Esp3I CGTCTC 1 cut(s) 339
FaeI CATG 6 cut(s) 75, 883, 1173, 1370, 1464, 1577
FalI AAGNNNNNCTT 6 cut(s) 434, 466, 483, 515, 791, 823
FaqI GGGAC 2 cut(s) 581, 1043
FatI CATG 6 cut(s) 71, 879, 1169, 1366, 1460, 1573
FauI CCCGC 1 cut(s) 1324
FauNDI CATATG 1 cut(s) 284
FbaI TGATCA 1 cut(s) 682
FblI GTMKAC 4 cut(s) 582, 1065, 1495, 1522
Fnu4HI GCNGC 8 cut(s) 76, 151, 289, 303, 555, 1093, 1254, 1465
FokI GGATG 3 cut(s) 341, 678, 1172
Fsp4HI GCNGC 8 cut(s) 76, 151, 289, 303, 555, 1093, 1254, 1465
FspBI CTAG 3 cut(s) 735, 911, 936
FspI TGCGCA 2 cut(s) 893, 1591
GlaI GCGC 3 cut(s) 292, 893, 1591
GluI GCNGC 8 cut(s) 76, 151, 289, 303, 555, 1093, 1254, 1465
GsuI CTGGAG 1 cut(s) 937
HaeIII GGCC 2 cut(s) 55, 1179
HapII CCGG 2 cut(s) 56, 1228
HgaI GACGC 1 cut(s) 463
HhaI GCGC 3 cut(s) 293, 894, 1592
Hin1II CATG 6 cut(s) 75, 883, 1173, 1370, 1464, 1577
Hin6I GCGC 3 cut(s) 291, 892, 1590
HinP1I GCGC 3 cut(s) 291, 892, 1590
HincII GTYRAC 6 cut(s) 13, 817, 1066, 1407, 1496, 1523
HindII GTYRAC 6 cut(s) 13, 817, 1066, 1407, 1496, 1523
HinfI GANTC 7 cut(s) 428, 689, 947, 1130, 1293, 1346, 1408
HpaII CCGG 2 cut(s) 56, 1228
HphI GGTGA 2 cut(s) 335, 1384
Hpy188III TCNNGA 5 cut(s) 221, 370, 451, 686, 1309
Hpy99I CGWCG 2 cut(s) 1400, 1524
HpyAV CCTTC 6 cut(s) 83, 485, 489, 817, 1100, 1320
HpyCH4III ACNGT 5 cut(s) 725, 757, 1282, 1487, 1517
HpyCH4IV ACGT 1 cut(s) 348
HpyF10VI GCNNNNNNNGC 3 cut(s) 156, 299, 1262
HpyF3I CTNAG 5 cut(s) 43, 215, 701, 777, 1382
HpySE526I ACGT 1 cut(s) 348
Hsp92II CATG 6 cut(s) 75, 883, 1173, 1370, 1464, 1577
HspAI GCGC 3 cut(s) 291, 892, 1590
KflI GGGWCCC 1 cut(s) 1030
KpnI GGTACC 1 cut(s) 1213
Ksp22I TGATCA 1 cut(s) 682
Kzo9I GATC 5 cut(s) 194, 414, 682, 970, 1245
LmnI GCTCC 1 cut(s) 918
Lsp1109I GCAGC 2 cut(s) 289, 1104
LweI GCATC 5 cut(s) 146, 228, 656, 1150, 1417
MaeI CTAG 3 cut(s) 735, 911, 936
MaeII ACGT 1 cut(s) 348
MaeIII GTNAC 4 cut(s) 28, 392, 517, 1372
MalI GATC 5 cut(s) 196, 416, 684, 972, 1247
MbiI CCGCTC 1 cut(s) 1552
MboI GATC 5 cut(s) 194, 414, 682, 970, 1245
MboII GAAGA 7 cut(s) 236, 517, 895, 1139, 1282, 1285, 1445
MflI RGATCY 1 cut(s) 1245
MlsI TGGCCA 1 cut(s) 1179
MluI ACGCGT 1 cut(s) 455
MluNI TGGCCA 1 cut(s) 1179
MlyI GAGTC 2 cut(s) 1355, 1402
Mox20I TGGCCA 1 cut(s) 1179
MroXI GAANNNNTTC 3 cut(s) 185, 408, 446
MscI TGGCCA 1 cut(s) 1179
MseI TTAA 8 cut(s) 129, 230, 563, 720, 762, 954, 1011, 1545
MslI CAYNNNNRTG 1 cut(s) 611
Msp20I TGGCCA 1 cut(s) 1179
MspI CCGG 2 cut(s) 56, 1228
MspR9I CCNGG 2 cut(s) 812, 1157
Mva1269I GAATGC 2 cut(s) 140, 1157
MvaI CCWGG 2 cut(s) 812, 1157
MvnI CGCG 4 cut(s) 78, 291, 457, 1057
MwoI GCNNNNNNNGC 3 cut(s) 156, 299, 1262
NdeI CATATG 1 cut(s) 284
NdeII GATC 5 cut(s) 194, 414, 682, 970, 1245
NlaIII CATG 6 cut(s) 75, 883, 1173, 1370, 1464, 1577
NlaIV GGNNCC 5 cut(s) 900, 1031, 1032, 1211, 1247
NmuCI GTSAC 1 cut(s) 1372
NsbI TGCGCA 2 cut(s) 893, 1591
NspI RCATGY 1 cut(s) 1173
NspV TTCGAA 2 cut(s) 87, 1104
OliI CACNNNNGTG 1 cut(s) 611
PaeI GCATGC 1 cut(s) 1173
PcsI WCGNNNNNNNCGW 1 cut(s) 423
PctI GAATGC 2 cut(s) 140, 1157
PdmI GAANNNNTTC 3 cut(s) 185, 408, 446
PfeI GAWTC 5 cut(s) 428, 689, 947, 1130, 1293
PkrI GCNGC 8 cut(s) 77, 152, 290, 304, 556, 1094, 1255, 1466
PleI GAGTC 2 cut(s) 1354, 1402
PpsI GAGTC 2 cut(s) 1354, 1402
PpuMI RGGWCCY 1 cut(s) 1030
PshBI ATTAAT 4 cut(s) 129, 230, 762, 1011
Psp5II RGGWCCY 1 cut(s) 1030
Psp6I CCWGG 2 cut(s) 810, 1155
PspGI CCWGG 2 cut(s) 810, 1155
PspN4I GGNNCC 5 cut(s) 900, 1031, 1032, 1211, 1247
PspPI GGNCC 4 cut(s) 377, 1030, 1278, 1363
PspPPI RGGWCCY 1 cut(s) 1030
PstI CTGCAG 2 cut(s) 613, 1094
PsuI RGATCY 1 cut(s) 1245
RsaI GTAC 7 cut(s) 298, 362, 460, 509, 784, 1211, 1514
RsaNI GTAC 7 cut(s) 297, 361, 459, 508, 783, 1210, 1513
RseI CAYNNNNRTG 1 cut(s) 611
SalI GTCGAC 3 cut(s) 1064, 1494, 1521
SaqAI TTAA 8 cut(s) 129, 230, 563, 720, 762, 954, 1011, 1545
SatI GCNGC 8 cut(s) 76, 151, 289, 303, 555, 1093, 1254, 1465
Sau3AI GATC 5 cut(s) 194, 414, 682, 970, 1245
Sau96I GGNCC 4 cut(s) 377, 1030, 1278, 1363
ScaI AGTACT 1 cut(s) 298
SchI GAGTC 2 cut(s) 1355, 1402
ScrFI CCNGG 2 cut(s) 812, 1157
SfaNI GCATC 5 cut(s) 146, 228, 656, 1150, 1417
SfcI CTRYAG 5 cut(s) 190, 308, 609, 903, 1090
SfuI TTCGAA 2 cut(s) 87, 1104
SinI GGWCC 4 cut(s) 377, 1030, 1278, 1363
SmiMI CAYNNNNRTG 1 cut(s) 611
SpeI ACTAGT 1 cut(s) 734
SphI GCATGC 1 cut(s) 1173
SspMI CTAG 3 cut(s) 735, 911, 936
StyD4I CCNGG 2 cut(s) 810, 1155
TaaI ACNGT 5 cut(s) 725, 757, 1282, 1487, 1517
TaiI ACGT 1 cut(s) 351
TaqI TCGA 8 cut(s) 87, 417, 431, 1065, 1104, 1425, 1495, 1522
TatI WGTACW 2 cut(s) 296, 507
TauI GCSGC 6 cut(s) 78, 153, 291, 557, 1256, 1467
TfiI GAWTC 5 cut(s) 428, 689, 947, 1130, 1293
Tru1I TTAA 8 cut(s) 129, 230, 563, 720, 762, 954, 1011, 1545
Tru9I TTAA 8 cut(s) 129, 230, 563, 720, 762, 954, 1011, 1545
TscAI CASTG 5 cut(s) 613, 618, 681, 760, 1102
TseFI GTSAC 1 cut(s) 1372
TseI GCWGC 2 cut(s) 302, 1092
Tsp45I GTSAC 1 cut(s) 1372
TspDTI ATGAA 9 cut(s) 60, 147, 242, 256, 837, 896, 939, 952, 1164
TspGWI ACGGA 3 cut(s) 87, 350, 1104
TspRI CASTG 5 cut(s) 613, 618, 681, 760, 1102
VpaK11BI GGWCC 4 cut(s) 377, 1030, 1278, 1363
VspI ATTAAT 4 cut(s) 129, 230, 762, 1011
XapI RAATTY 4 cut(s) 60, 243, 1077, 1417
XceI RCATGY 1 cut(s) 1173
XmiI GTMKAC 4 cut(s) 582, 1065, 1495, 1522
XmnI GAANNNNTTC 3 cut(s) 185, 408, 446
XspI CTAG 3 cut(s) 735, 911, 936
ZrmI AGTACT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.