Rmu_sc0006483.1_g000013

Wall-associated receptor kinase galacturonan-binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006483.1
OG0000052
Physical Location & Seq
Forward (+)
81604 .. 84203
2600 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006483.1_g000013.1.cds

Sequence Viewer

Length: 1410 bp
atgcaatggctagttcagcacatgattttcattctattgttatataaatggcgcataagtacagcatcatcatcaccactgaagatagcgaaggagaactgtacatcgcagtgcggaggtgttagcatcccatacccatttgggataggacctaataaccattgttattttgactcgtggtacgaaatagaatgcaacctctctgttccagtagcaaagccgttcttgaggcgtctacaactggaggtgctgaatatttctgtttatggtggaaacacaactgttcaggttccaagccctgttacttacttgagttgcaaggggaagcaatctccgctagcgccaaatctgaccggaagcccttttatgtactctgatgaaaacagtttcgttgcagtcagttgtgattcatttgcctcgctgcgcacagatacgcacactcttactgggtgctcgtcaacatgtcttgatcaagatttgctttccgcttctgaaatgtgcaagtatggttttgaatgttgccggactgcccttccccaatctatcactactactttcagcatcacacaagaacgagatgaaacaagaagaaataagacggattgcgaggactatgctttcctggttgaccaacagtggtttgatgaacataaatcagacttcagagctatcaaggatagggacgtcgttcctgtgaaattacactggatcttaagcttagaaaaaaataagtccttgatcaagtcatttgaagcattcacagaagtagacggccggaggaacccaaatgacgcaacacccagctgctatgcatataggtttttgaggaattacacacggtctgatttgtatgactgtatgtgtccgccaggctatgaaggaaatccctaccttctcttaccttgtggagatattgatgaatgcaaggatggtaatccgtgccagggtgatgatcttaatacaactactacatggaacattagtaatgccaaatgtcagaacactgacgggggtcatatatgctactcaaatagaacaggggaaacctgcgaattgtttgcctctgacagagttgctaagtgctaccatcaaagtaggcctcactctcagctcaagcctattctctcagaaggaattgataggattgaggactccaaggacttgcagcaacagagcaaagccttcgataagctcactgaccgcgtcgaagatcgccaggtcgattcgacaagattccagaaggccatggcttccattgctgccaccttagaagtcgatttggaagctatgagaaagagggagaaagaattgggtactgtgaagatcaatccacgcgatgttgagataattgccatcaatatgttgctgggtttgaattggaacagtgaggcaggaagtgagtttttttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

469

Amino Acids

53.07

Weight (kDa)

5.29

Isoelectric Point (pI)

52.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 687
Acc16I TGCGCA 1 cut(s) 425
Acc36I ACCTGC 1 cut(s) 1055
AccI GTMKAC 2 cut(s) 235, 768
AccII CGCG 2 cut(s) 1203, 1335
AciI CCGC 5 cut(s) 114, 335, 486, 866, 1201
AclWI GGATC 1 cut(s) 716
AcoI YGGCCR 1 cut(s) 772
AcuI CTGAAG 2 cut(s) 101, 646
AcyI GRCGYC 2 cut(s) 232, 684
AfaI GTAC 5 cut(s) 61, 103, 182, 371, 1315
AfiI CCNNNNNNNGG 1 cut(s) 944
AflII CTTAAG 1 cut(s) 712
AflIII ACRYGT 1 cut(s) 461
AgsI TTSAA 3 cut(s) 515, 752, 1375
AjnI CCWGG 4 cut(s) 621, 868, 942, 1215
AluBI AGCT 6 cut(s) 668, 717, 804, 1111, 1192, 1286
AluI AGCT 6 cut(s) 668, 717, 804, 1111, 1192, 1286
Alw21I GWGCWC 1 cut(s) 455
AlwI GGATC 1 cut(s) 716
AoxI GGCC 3 cut(s) 772, 1097, 1242
ApeKI GCWGC 4 cut(s) 421, 804, 1165, 1259
AspLEI GCGC 3 cut(s) 54, 343, 426
AspS9I GGNCC 1 cut(s) 149
AsuHPI GGTGA 2 cut(s) 66, 959
AsuNHI GCTAGC 1 cut(s) 337
AvaII GGWCC 1 cut(s) 149
BauI CACGAG 1 cut(s) 175
Bbv12I GWGCWC 1 cut(s) 455
BbvI GCAGC 4 cut(s) 408, 791, 1177, 1246
BccI CCATC 3 cut(s) 923, 1095, 1361
BceAI ACGGC 2 cut(s) 205, 787
BcgI CGANNNNNNTGC 6 cut(s) 596, 630, 1040, 1074, 1165, 1199
BciT130I CCWGG 4 cut(s) 623, 870, 944, 1217
BclI TGATCA 2 cut(s) 469, 738
BfaI CTAG 2 cut(s) 11, 338
BfoI RGCGCY 1 cut(s) 344
BfrI CTTAAG 1 cut(s) 712
BfuAI ACCTGC 1 cut(s) 1055
BisI GCNGC 4 cut(s) 422, 805, 1166, 1260
BlsI GCNGC 4 cut(s) 423, 806, 1167, 1261
Bme1390I CCNGG 4 cut(s) 623, 870, 944, 1217
Bme18I GGWCC 1 cut(s) 149
BmgT120I GGNCC 1 cut(s) 149
BmiI GGNNCC 2 cut(s) 291, 782
BmrFI CCNGG 4 cut(s) 623, 870, 944, 1217
BmrI ACTGGG 1 cut(s) 456
BmsI GCATC 3 cut(s) 74, 135, 570
BmtI GCTAGC 1 cut(s) 341
BmuI ACTGGG 1 cut(s) 456
BoxI GACNNNNGTC 1 cut(s) 1011
BpmI CTGGAG 1 cut(s) 263
BpuEI CTTGAG 3 cut(s) 247, 331, 1097
BsaBI GATNNNNATC 1 cut(s) 933
BsaHI GRCGYC 2 cut(s) 232, 684
BsaJI CCNNGG 3 cut(s) 943, 1155, 1245
BsaWI WCCGGW 1 cut(s) 353
Bsc4I CCNNNNNNNGG 1 cut(s) 944
Bse1I ACTGG 4 cut(s) 209, 246, 451, 710
Bse3DI GCAATG 2 cut(s) 11, 1254
Bse8I GATNNNNATC 1 cut(s) 933
BseBI CCWGG 4 cut(s) 623, 870, 944, 1217
BseDI CCNNGG 3 cut(s) 943, 1155, 1245
BseGI GGATG 2 cut(s) 126, 934
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 1 cut(s) 944
BseMI GCAATG 2 cut(s) 11, 1254
BseMII CTCAG 2 cut(s) 1121, 1140
BseNI ACTGG 4 cut(s) 209, 246, 451, 710
BseX3I CGGCCG 1 cut(s) 772
BseXI GCAGC 4 cut(s) 408, 791, 1177, 1246
BseYI CCCAGC 2 cut(s) 800, 1366
Bsh1236I CGCG 2 cut(s) 1203, 1335
Bsh1285I CGRYCG 1 cut(s) 775
BshFI GGCC 3 cut(s) 774, 1099, 1244
BsiEI CGRYCG 1 cut(s) 775
BsiHKAI GWGCWC 1 cut(s) 455
BsiSI CCGG 3 cut(s) 354, 523, 775
BslFI GGGAC 1 cut(s) 695
BslI CCNNNNNNNGG 1 cut(s) 944
BsmFI GGGAC 1 cut(s) 695
BsmI GAATGC 3 cut(s) 197, 755, 926
BsnI GGCC 3 cut(s) 774, 1099, 1244
Bsp1286I GDGCHC 1 cut(s) 455
Bsp1407I TGTACA 1 cut(s) 101
Bsp143I GATC 6 cut(s) 469, 708, 738, 952, 1210, 1323
Bsp19I CCATGG 1 cut(s) 1245
BspACI CCGC 5 cut(s) 114, 335, 486, 866, 1201
BspANI GGCC 3 cut(s) 774, 1099, 1244
BspCNI CTCAG 2 cut(s) 1120, 1139
BspFNI CGCG 2 cut(s) 1203, 1335
BspLI GGNNCC 2 cut(s) 291, 782
BspMI ACCTGC 1 cut(s) 1055
BspOI GCTAGC 1 cut(s) 341
BspPI GGATC 1 cut(s) 716
BspTI CTTAAG 1 cut(s) 712
BsrDI GCAATG 2 cut(s) 11, 1254
BsrGI TGTACA 1 cut(s) 101
BsrI ACTGG 4 cut(s) 209, 246, 451, 710
BssECI CCNNGG 3 cut(s) 943, 1155, 1245
BssMI GATC 6 cut(s) 469, 708, 738, 952, 1210, 1323
BssNI GRCGYC 2 cut(s) 232, 684
BssSI CACGAG 1 cut(s) 175
BssT1I CCWWGG 2 cut(s) 1155, 1245
Bst2BI CACGAG 1 cut(s) 175
Bst2UI CCWGG 4 cut(s) 623, 870, 944, 1217
Bst4CI ACNGT 8 cut(s) 101, 283, 386, 636, 840, 857, 1318, 1385
BstACI GRCGYC 2 cut(s) 232, 684
BstAFI CTTAAG 1 cut(s) 712
BstAUI TGTACA 1 cut(s) 101
BstC8I GCNNGC 1 cut(s) 339
BstDEI CTNAG 5 cut(s) 718, 1077, 1107, 1126, 1267
BstDSI CCRYGG 1 cut(s) 1245
BstF5I GGATG 2 cut(s) 126, 934
BstFNI CGCG 2 cut(s) 1203, 1335
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 3 cut(s) 54, 343, 426
BstKTI GATC 6 cut(s) 472, 711, 741, 955, 1213, 1326
BstMBI GATC 6 cut(s) 469, 708, 738, 952, 1210, 1323
BstMCI CGRYCG 1 cut(s) 775
BstMWI GCNNNNNNNGC 3 cut(s) 16, 334, 1256
BstNI CCWGG 4 cut(s) 623, 870, 944, 1217
BstNSI RCATGY 1 cut(s) 465
BstPAI GACNNNNGTC 1 cut(s) 1011
BstSCI CCNGG 4 cut(s) 621, 868, 942, 1215
BstUI CGCG 2 cut(s) 1203, 1335
BstV1I GCAGC 4 cut(s) 408, 791, 1177, 1246
BstX2I RGATCY 1 cut(s) 708
BstYI RGATCY 1 cut(s) 708
BstZI CGGCCG 1 cut(s) 772
BsuRI GGCC 3 cut(s) 774, 1099, 1244
BtgI CCRYGG 1 cut(s) 1245
BtgZI GCGATG 2 cut(s) 90, 1350
BtsCI GGATG 2 cut(s) 126, 934
BtsI GCAGTG 1 cut(s) 116
BtsIMutI CAGTG 7 cut(s) 77, 116, 641, 703, 1002, 1194, 1390
BveI ACCTGC 1 cut(s) 1055
Cac8I GCNNGC 1 cut(s) 339
CfoI GCGC 3 cut(s) 54, 343, 426
Cfr13I GGNCC 1 cut(s) 149
CseI GACGC 3 cut(s) 221, 800, 1192
Csp6I GTAC 5 cut(s) 60, 102, 181, 370, 1314
CviAII CATG 4 cut(s) 22, 462, 972, 1246
CviQI GTAC 5 cut(s) 60, 102, 181, 370, 1314
DdeI CTNAG 5 cut(s) 718, 1077, 1107, 1126, 1267
DpnI GATC 6 cut(s) 471, 710, 740, 954, 1212, 1325
DpnII GATC 6 cut(s) 469, 708, 738, 952, 1210, 1323
EaeI YGGCCR 1 cut(s) 772
EagI CGGCCG 1 cut(s) 772
EciI GGCGGA 1 cut(s) 855
EclXI CGGCCG 1 cut(s) 772
Eco130I CCWWGG 2 cut(s) 1155, 1245
Eco147I AGGCCT 1 cut(s) 1099
Eco47I GGWCC 1 cut(s) 149
Eco52I CGGCCG 1 cut(s) 772
Eco57I CTGAAG 2 cut(s) 101, 646
EcoO109I RGGNCCY 1 cut(s) 149
EcoRII CCWGG 4 cut(s) 621, 868, 942, 1215
EcoT14I CCWWGG 2 cut(s) 1155, 1245
EcoT22I ATGCAT 1 cut(s) 814
ErhI CCWWGG 2 cut(s) 1155, 1245
FaeI CATG 4 cut(s) 25, 465, 975, 1249
FalI AAGNNNNNCTT 4 cut(s) 209, 241, 465, 497
FaqI GGGAC 1 cut(s) 695
FatI CATG 4 cut(s) 21, 461, 971, 1245
FbaI TGATCA 2 cut(s) 469, 738
FblI GTMKAC 2 cut(s) 235, 768
Fnu4HI GCNGC 4 cut(s) 422, 805, 1166, 1260
FokI GGATG 2 cut(s) 113, 941
Fsp4HI GCNGC 4 cut(s) 422, 805, 1166, 1260
FspBI CTAG 2 cut(s) 11, 338
FspI TGCGCA 1 cut(s) 425
GlaI GCGC 3 cut(s) 53, 342, 425
GluI GCNGC 4 cut(s) 422, 805, 1166, 1260
GsaI CCCAGC 2 cut(s) 804, 1370
GsuI CTGGAG 1 cut(s) 263
HaeII RGCGCY 1 cut(s) 344
HaeIII GGCC 3 cut(s) 774, 1099, 1244
HapII CCGG 3 cut(s) 354, 523, 775
HgaI GACGC 3 cut(s) 221, 800, 1192
HhaI GCGC 3 cut(s) 54, 343, 426
Hin1I GRCGYC 2 cut(s) 232, 684
Hin1II CATG 4 cut(s) 25, 465, 975, 1249
Hin6I GCGC 3 cut(s) 52, 341, 424
HinP1I GCGC 3 cut(s) 52, 341, 424
HincII GTYRAC 2 cut(s) 459, 628
HindII GTYRAC 2 cut(s) 459, 628
HindIII AAGCTT 1 cut(s) 715
HinfI GANTC 5 cut(s) 173, 407, 1151, 1223, 1233
HpaII CCGG 3 cut(s) 354, 523, 775
HphI GGTGA 2 cut(s) 66, 959
Hpy166II GTNNAC 4 cut(s) 236, 459, 628, 769
Hpy188I TCNGA 9 cut(s) 351, 376, 493, 658, 665, 844, 999, 1066, 1129
Hpy188III TCNNGA 4 cut(s) 226, 467, 473, 1237
Hpy8I GTNNAC 4 cut(s) 236, 459, 628, 769
Hpy99I CGWCG 2 cut(s) 689, 1208
HpyAV CCTTC 7 cut(s) 85, 542, 872, 902, 1124, 1192, 1234
HpyCH4III ACNGT 8 cut(s) 101, 283, 386, 636, 840, 857, 1318, 1385
HpyCH4IV ACGT 1 cut(s) 684
HpyCH4V TGCA 8 cut(s) 4, 195, 318, 395, 501, 812, 924, 1165
HpyF10VI GCNNNNNNNGC 3 cut(s) 16, 334, 1256
HpyF3I CTNAG 5 cut(s) 718, 1077, 1107, 1126, 1267
HpySE526I ACGT 1 cut(s) 684
Hsp92I GRCGYC 2 cut(s) 232, 684
Hsp92II CATG 4 cut(s) 25, 465, 975, 1249
HspAI GCGC 3 cut(s) 52, 341, 424
Ksp22I TGATCA 2 cut(s) 469, 738
Kzo9I GATC 6 cut(s) 469, 708, 738, 952, 1210, 1323
Lsp1109I GCAGC 4 cut(s) 408, 791, 1177, 1246
LweI GCATC 3 cut(s) 74, 135, 570
MaeI CTAG 2 cut(s) 11, 338
MaeII ACGT 1 cut(s) 684
MaeIII GTNAC 1 cut(s) 301
MalI GATC 6 cut(s) 471, 710, 740, 954, 1212, 1325
MboI GATC 6 cut(s) 469, 708, 738, 952, 1210, 1323
MboII GAAGA 4 cut(s) 94, 600, 1220, 1333
MflI RGATCY 1 cut(s) 708
MhlI GDGCHC 1 cut(s) 455
MluCI AATT 7 cut(s) 698, 829, 1052, 1134, 1307, 1347, 1375
MlyI GAGTC 2 cut(s) 167, 1145
Mph1103I ATGCAT 1 cut(s) 814
MseI TTAA 2 cut(s) 713, 957
MslI CAYNNNNRTG 2 cut(s) 109, 1358
MspA1I CMGCKG 1 cut(s) 804
MspCI CTTAAG 1 cut(s) 712
MspI CCGG 3 cut(s) 354, 523, 775
MspR9I CCNGG 4 cut(s) 623, 870, 944, 1217
Mva1269I GAATGC 3 cut(s) 197, 755, 926
MvaI CCWGG 4 cut(s) 623, 870, 944, 1217
MvnI CGCG 2 cut(s) 1203, 1335
MwoI GCNNNNNNNGC 3 cut(s) 16, 334, 1256
NcoI CCATGG 1 cut(s) 1245
NdeII GATC 6 cut(s) 469, 708, 738, 952, 1210, 1323
NheI GCTAGC 1 cut(s) 337
NlaIII CATG 4 cut(s) 25, 465, 975, 1249
NlaIV GGNNCC 2 cut(s) 291, 782
NsbI TGCGCA 1 cut(s) 425
NsiI ATGCAT 1 cut(s) 814
NspI RCATGY 1 cut(s) 465
PceI AGGCCT 1 cut(s) 1099
PciI ACATGT 1 cut(s) 461
PctI GAATGC 3 cut(s) 197, 755, 926
PfeI GAWTC 3 cut(s) 407, 1223, 1233
PflFI GACNNNGTC 1 cut(s) 1202
PkrI GCNGC 4 cut(s) 423, 806, 1167, 1261
PleI GAGTC 2 cut(s) 167, 1145
PpsI GAGTC 2 cut(s) 167, 1145
PpuMI RGGWCCY 1 cut(s) 149
PscI ACATGT 1 cut(s) 461
PshAI GACNNNNGTC 1 cut(s) 1011
Psp5II RGGWCCY 1 cut(s) 149
Psp6I CCWGG 4 cut(s) 621, 868, 942, 1215
PspFI CCCAGC 2 cut(s) 800, 1366
PspGI CCWGG 4 cut(s) 621, 868, 942, 1215
PspN4I GGNNCC 2 cut(s) 291, 782
PspPI GGNCC 1 cut(s) 149
PspPPI RGGWCCY 1 cut(s) 149
PsuI RGATCY 1 cut(s) 708
PsyI GACNNNGTC 1 cut(s) 1202
PvuII CAGCTG 1 cut(s) 804
RsaI GTAC 5 cut(s) 61, 103, 182, 371, 1315
RsaNI GTAC 5 cut(s) 60, 102, 181, 370, 1314
RseI CAYNNNNRTG 2 cut(s) 109, 1358
SaqAI TTAA 2 cut(s) 713, 957
SatI GCNGC 4 cut(s) 422, 805, 1166, 1260
Sau3AI GATC 6 cut(s) 469, 708, 738, 952, 1210, 1323
Sau96I GGNCC 1 cut(s) 149
SchI GAGTC 2 cut(s) 167, 1145
ScrFI CCNGG 4 cut(s) 623, 870, 944, 1217
SduI GDGCHC 1 cut(s) 455
SfaNI GCATC 3 cut(s) 74, 135, 570
SinI GGWCC 1 cut(s) 149
SmiMI CAYNNNNRTG 2 cut(s) 109, 1358
SmlI CTYRAG 4 cut(s) 226, 310, 712, 1112
SmoI CTYRAG 4 cut(s) 226, 310, 712, 1112
Sse9I AATT 7 cut(s) 698, 829, 1052, 1134, 1307, 1347, 1375
SseBI AGGCCT 1 cut(s) 1099
SsiI CCGC 5 cut(s) 114, 335, 486, 866, 1201
SspI AATATT 1 cut(s) 256
SspMI CTAG 2 cut(s) 11, 338
StuI AGGCCT 1 cut(s) 1099
StyD4I CCNGG 4 cut(s) 621, 868, 942, 1215
StyI CCWWGG 2 cut(s) 1155, 1245
TaaI ACNGT 8 cut(s) 101, 283, 386, 636, 840, 857, 1318, 1385
TaiI ACGT 1 cut(s) 687
TaqI TCGA 5 cut(s) 1185, 1206, 1221, 1226, 1275
TasI AATT 7 cut(s) 698, 829, 1052, 1134, 1307, 1347, 1375
TatI WGTACW 3 cut(s) 59, 101, 369
TfiI GAWTC 3 cut(s) 407, 1223, 1233
Tru1I TTAA 2 cut(s) 713, 957
Tru9I TTAA 2 cut(s) 713, 957
TscAI CASTG 7 cut(s) 84, 116, 641, 710, 1009, 1201, 1390
TseI GCWGC 4 cut(s) 421, 804, 1165, 1259
TspDTI ATGAA 7 cut(s) 19, 393, 399, 594, 660, 891, 933
TspGWI ACGGA 2 cut(s) 614, 927
TspRI CASTG 7 cut(s) 84, 116, 641, 710, 1009, 1201, 1390
Tth111I GACNNNGTC 1 cut(s) 1202
Vha464I CTTAAG 1 cut(s) 712
VpaK11BI GGWCC 1 cut(s) 149
XceI RCATGY 1 cut(s) 465
XmiI GTMKAC 2 cut(s) 235, 768
XspI CTAG 2 cut(s) 11, 338
ZraI GACGTC 1 cut(s) 685
Zsp2I ATGCAT 1 cut(s) 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.