RchiOBHm_Chr7g0234031

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
58629710 .. 58635688
5979 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20973

Sequence Viewer

Length: 1182 bp
ATGATGGAAATTCTAGTTCATCAAATGATATTCATGTTGCTGTTATCCATATGCCGCGCAAGTACTGCTGCACCAAAGATGGCAAAGCCTAGTTGCCCAACGGAGTGTGGAAATGTTACCATCCCGTACCCTTTCGGGATTGGACCCAATCCAAGTTGTTACTATGACGAATGGTTTCAAATTGACTGCAACGAATCTACCCAGCTGAAGCCTTTCTTGAGGCGTATCAATTTGGAGGTGCTGAGTATATTTACCGAAGGAAGGCTTCAGGTGAACAGCCCCGTTACATTCTTCTGCGAGGGAAATAATAGTAGAAACCAAGTGGCGGATTTAAGGGACAGCCCTTTCGTCTACTCTCAGAGCGACAACATATTCACTGCAGTGAGTTGCGATTACTTTGCTTTGTTGAGTTCCGCATACTCTATTGTTGGCGGATGCACGTCATTTTGTGGTACAGGTTCTGAAGACCTGGATTGCGATAGCGGTATAAACTGTTGTCAGACTAGTATTCCTCCAGGCTTGCTGGCAGCCGTACCGTTTCTCTTTCAAAGAGAAAAAAGTACTTCTCCAGTCCTCACTGCTATTGAAAAAACTACAGATTGCCGTAAGTTTGCCTTCCTGGTTGACAAAGATTGGTTTAGCAACACTGCTTCATCATTATCAATTTCTGGCTTTACAGCTGACATGAAGAGAGGGCCCAAGGTTCCTGTGGTACTGCTCTGGAGCATAAACAACCAAACTAGGCCATTTGATTTATTTAACAAGTTCATTGTTGATCCTGATCAGCATCGACTTAATGTGCATACTTACTACGGTGATTTCTCAAGGGTCAATTTGTCAGCGCTTAGGGACCCGTCCTGCATAATTAACCCCGCAGTCAATTGGTCAAAAATTGTTTGTTCCTGCCGTTATGGGTTCGAAGGGAATCCGTATCTCGGGGAAAAATCTTGTGATGACATTGATGAATGCCAGGATCCTGACCGTTACCGATGCTTTGGCCCCAACAAGTGCGTGAACGTTATTGGTTCGTACCTATGTGTGGACAACCAGAGAAAGGACAACCGGAGAAAGGCTAAATGGATCCTTGTCGCAGGTTTGAGCTCGAGCCTTGGACTCTTATTGTTGCTTATTGGTATATGGTTTGGATACAAACTCCTGAAGAAAAAGAACGAGATAAAATGA

Protein Analysis

393

Amino Acids

44.04

Weight (kDa)

7.31

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 32 - 87 1.6e-12 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1082
AccI GTMKAC 1 cut(s) 351
AccII CGCG 1 cut(s) 57
AciI CCGC 6 cut(s) 55, 326, 414, 432, 483, 873
AclI AACGTT 1 cut(s) 1017
AclWI GGATC 5 cut(s) 770, 968, 981, 1075, 1088
AcsI RAATTY 1 cut(s) 9
AcuI CTGAAG 4 cut(s) 227, 251, 483, 1178
AfaI GTAC 7 cut(s) 64, 128, 454, 534, 562, 714, 1031
AfeI AGCGCT 1 cut(s) 843
AfiI CCNNNNNNNGG 6 cut(s) 261, 325, 935, 1039, 1054, 1069
AgsI TTSAA 3 cut(s) 179, 548, 587
AhlI ACTAGT 1 cut(s) 503
AjiI CACGTC 1 cut(s) 441
AjnI CCWGG 4 cut(s) 468, 514, 618, 969
AleI CACNNNNGTG 1 cut(s) 380
AluBI AGCT 3 cut(s) 205, 680, 1101
AluI AGCT 3 cut(s) 205, 680, 1101
Alw21I GWGCWC 1 cut(s) 1103
AlwI GGATC 5 cut(s) 770, 968, 981, 1075, 1088
AlwNI CAGNNNCTG 1 cut(s) 461
Ama87I CYCGRG 2 cut(s) 935, 1102
Aor51HI AGCGCT 1 cut(s) 843
AoxI GGCC 3 cut(s) 695, 743, 997
ApaI GGGCCC 1 cut(s) 699
ApeKI GCWGC 2 cut(s) 68, 527
ApoI RAATTY 1 cut(s) 9
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
Asp700I GAANNNNTTC 2 cut(s) 174, 212
AspLEI GCGC 2 cut(s) 59, 844
AspS9I GGNCC 5 cut(s) 143, 695, 696, 850, 998
AsuHPI GGTGA 2 cut(s) 283, 827
AsuII TTCGAA 1 cut(s) 918
AvaI CYCGRG 2 cut(s) 935, 1102
AvaII GGWCC 2 cut(s) 143, 850
BaeGI GKGCMC 1 cut(s) 699
BamHI GGATCC 2 cut(s) 973, 1080
BanII GRGCYC 2 cut(s) 699, 1103
BbsI GAAGAC 1 cut(s) 471
Bbv12I GWGCWC 1 cut(s) 1103
BbvI GCAGC 2 cut(s) 55, 539
BccI CCATC 2 cut(s) 73, 128
BceAI ACGGC 3 cut(s) 515, 588, 891
BcgI CGANNNNNNTGC 2 cut(s) 380, 414
BciT130I CCWGG 4 cut(s) 470, 516, 620, 971
BciVI GTATCC 1 cut(s) 1139
BclI TGATCA 1 cut(s) 781
BcuI ACTAGT 1 cut(s) 503
BfaI CTAG 4 cut(s) 14, 90, 504, 741
BfmI CTRYAG 2 cut(s) 378, 594
BfoI RGCGCY 1 cut(s) 845
BfuAI ACCTGC 1 cut(s) 1082
BfuI GTATCC 1 cut(s) 1139
BisI GCNGC 3 cut(s) 55, 69, 528
BlsI GCNGC 3 cut(s) 56, 70, 529
BmcAI AGTACT 2 cut(s) 64, 562
Bme1390I CCNGG 4 cut(s) 470, 516, 620, 971
Bme18I GGWCC 2 cut(s) 143, 850
BmeT110I CYCGRG 2 cut(s) 935, 1102
BmgBI CACGTC 1 cut(s) 441
BmgT120I GGNCC 5 cut(s) 143, 695, 696, 850, 998
BmiI GGNNCC 8 cut(s) 145, 697, 705, 851, 852, 975, 1000, 1082
BmrFI CCNGG 4 cut(s) 470, 516, 620, 971
BmsI GCATC 3 cut(s) 425, 796, 980
BpiI GAAGAC 1 cut(s) 471
BpmI CTGGAG 3 cut(s) 498, 552, 742
Bpu10I CCTNAGC 1 cut(s) 845
Bpu14I TTCGAA 1 cut(s) 918
BpuEI CTTGAG 2 cut(s) 238, 808
BsaBI GATNNNNATC 2 cut(s) 780, 786
BsaJI CCNNGG 2 cut(s) 699, 1108
BsaWI WCCGGW 1 cut(s) 1062
Bsc4I CCNNNNNNNGG 6 cut(s) 261, 325, 935, 1039, 1054, 1069
Bse1I ACTGG 1 cut(s) 569
Bse8I GATNNNNATC 2 cut(s) 780, 786
BseBI CCWGG 4 cut(s) 470, 516, 620, 971
BseDI CCNNGG 2 cut(s) 699, 1108
BseGI GGATG 2 cut(s) 120, 440
BseJI GATNNNNATC 2 cut(s) 780, 786
BseLI CCNNNNNNNGG 6 cut(s) 261, 325, 935, 1039, 1054, 1069
BseMII CTCAG 2 cut(s) 233, 371
BseNI ACTGG 1 cut(s) 569
BseSI GKGCMC 1 cut(s) 699
BseXI GCAGC 2 cut(s) 55, 539
BseYI CCCAGC 1 cut(s) 201
BsgI GTGCAG 1 cut(s) 54
Bsh1236I CGCG 1 cut(s) 57
BshFI GGCC 3 cut(s) 697, 745, 999
BsiHKAI GWGCWC 1 cut(s) 1103
BsiHKCI CYCGRG 2 cut(s) 935, 1102
BsiSI CCGG 1 cut(s) 1063
BslFI GGGAC 2 cut(s) 350, 863
BslI CCNNNNNNNGG 6 cut(s) 261, 325, 935, 1039, 1054, 1069
BsmFI GGGAC 2 cut(s) 350, 863
BsmI GAATGC 1 cut(s) 971
BsnI GGCC 3 cut(s) 697, 745, 999
BsoBI CYCGRG 2 cut(s) 935, 1102
Bsp119I TTCGAA 1 cut(s) 918
Bsp120I GGGCCC 1 cut(s) 695
Bsp1286I GDGCHC 2 cut(s) 699, 1103
Bsp143I GATC 4 cut(s) 775, 781, 973, 1080
BspACI CCGC 6 cut(s) 55, 326, 414, 432, 483, 873
BspANI GGCC 3 cut(s) 697, 745, 999
BspCNI CTCAG 2 cut(s) 234, 370
BspFNI CGCG 1 cut(s) 57
BspLI GGNNCC 8 cut(s) 145, 697, 705, 851, 852, 975, 1000, 1082
BspMAI CTGCAG 1 cut(s) 382
BspMI ACCTGC 1 cut(s) 1082
BspPI GGATC 5 cut(s) 770, 968, 981, 1075, 1088
BspT104I TTCGAA 1 cut(s) 918
BsrI ACTGG 1 cut(s) 569
BssECI CCNNGG 2 cut(s) 699, 1108
BssMI GATC 4 cut(s) 775, 781, 973, 1080
BssT1I CCWWGG 2 cut(s) 699, 1108
Bst2UI CCWGG 4 cut(s) 470, 516, 620, 971
Bst4CI ACNGT 4 cut(s) 494, 537, 815, 983
Bst6I CTCTTC 1 cut(s) 683
BstAPI GCANNNNNTGC 1 cut(s) 65
BstBI TTCGAA 1 cut(s) 918
BstC8I GCNNGC 2 cut(s) 521, 525
BstDEI CTNAG 3 cut(s) 242, 357, 845
BstF5I GGATG 2 cut(s) 120, 440
BstFNI CGCG 1 cut(s) 57
BstH2I RGCGCY 1 cut(s) 845
BstHHI GCGC 2 cut(s) 59, 844
BstKTI GATC 4 cut(s) 778, 784, 976, 1083
BstMBI GATC 4 cut(s) 775, 781, 973, 1080
BstMWI GCNNNNNNNGC 1 cut(s) 65
BstNI CCWGG 4 cut(s) 470, 516, 620, 971
BstSCI CCNGG 4 cut(s) 468, 514, 618, 969
BstSFI CTRYAG 2 cut(s) 378, 594
BstSLI GKGCMC 1 cut(s) 699
BstUI CGCG 1 cut(s) 57
BstV1I GCAGC 2 cut(s) 55, 539
BstV2I GAAGAC 1 cut(s) 471
BstX2I RGATCY 2 cut(s) 973, 1080
BstYI RGATCY 2 cut(s) 973, 1080
BsuI GTATCC 1 cut(s) 1139
BsuRI GGCC 3 cut(s) 697, 745, 999
BtrI CACGTC 1 cut(s) 441
BtsCI GGATG 2 cut(s) 120, 440
BtsI GCAGTG 4 cut(s) 375, 387, 576, 645
BtsIMutI CAGTG 4 cut(s) 375, 387, 576, 645
BveI ACCTGC 1 cut(s) 1082
Cac8I GCNNGC 2 cut(s) 521, 525
CaiI CAGNNNCTG 1 cut(s) 461
CfoI GCGC 2 cut(s) 59, 844
Cfr13I GGNCC 5 cut(s) 143, 695, 696, 850, 998
Csp6I GTAC 7 cut(s) 63, 127, 453, 533, 561, 713, 1030
CviAII CATG 2 cut(s) 34, 685
CviQI GTAC 7 cut(s) 63, 127, 453, 533, 561, 713, 1030
DdeI CTNAG 3 cut(s) 242, 357, 845
DpnI GATC 4 cut(s) 777, 783, 975, 1082
DpnII GATC 4 cut(s) 775, 781, 973, 1080
Eam1104I CTCTTC 1 cut(s) 683
EarI CTCTTC 1 cut(s) 683
EciI GGCGGA 2 cut(s) 341, 447
Ecl136II GAGCTC 1 cut(s) 1101
Eco130I CCWWGG 2 cut(s) 699, 1108
Eco24I GRGCYC 2 cut(s) 699, 1103
Eco47I GGWCC 2 cut(s) 143, 850
Eco47III AGCGCT 1 cut(s) 843
Eco53kI GAGCTC 1 cut(s) 1101
Eco57I CTGAAG 4 cut(s) 227, 251, 483, 1178
Eco88I CYCGRG 2 cut(s) 935, 1102
EcoICRI GAGCTC 1 cut(s) 1101
EcoO109I RGGNCCY 2 cut(s) 695, 850
EcoRII CCWGG 4 cut(s) 468, 514, 618, 969
EcoT14I CCWWGG 2 cut(s) 699, 1108
EcoT38I GRGCYC 2 cut(s) 699, 1103
ErhI CCWWGG 2 cut(s) 699, 1108
FaeI CATG 2 cut(s) 37, 688
FalI AAGNNNNNCTT 6 cut(s) 200, 232, 249, 281, 599, 631
FaqI GGGAC 2 cut(s) 350, 863
FatI CATG 2 cut(s) 33, 684
FauI CCCGC 1 cut(s) 880
FauNDI CATATG 1 cut(s) 50
FbaI TGATCA 1 cut(s) 781
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 3 cut(s) 55, 69, 528
FokI GGATG 2 cut(s) 107, 447
FriOI GRGCYC 2 cut(s) 699, 1103
Fsp4HI GCNGC 3 cut(s) 55, 69, 528
FspBI CTAG 4 cut(s) 14, 90, 504, 741
GlaI GCGC 2 cut(s) 58, 843
GluI GCNGC 3 cut(s) 55, 69, 528
GsaI CCCAGC 1 cut(s) 205
GsuI CTGGAG 3 cut(s) 498, 552, 742
HaeII RGCGCY 1 cut(s) 845
HaeIII GGCC 3 cut(s) 697, 745, 999
HapII CCGG 1 cut(s) 1063
HhaI GCGC 2 cut(s) 59, 844
Hin1II CATG 2 cut(s) 37, 688
Hin6I GCGC 2 cut(s) 57, 842
HinP1I GCGC 2 cut(s) 57, 842
HincII GTYRAC 1 cut(s) 625
HindII GTYRAC 1 cut(s) 625
HinfI GANTC 3 cut(s) 194, 925, 1113
HpaII CCGG 1 cut(s) 1063
HphI GGTGA 2 cut(s) 283, 827
Hpy166II GTNNAC 5 cut(s) 274, 352, 625, 1015, 1042
Hpy188I TCNGA 3 cut(s) 360, 463, 501
Hpy188III TCNNGA 6 cut(s) 136, 217, 721, 779, 977, 1156
Hpy8I GTNNAC 5 cut(s) 274, 352, 625, 1015, 1042
HpyAV CCTTC 4 cut(s) 251, 255, 625, 914
HpyCH4III ACNGT 4 cut(s) 494, 537, 815, 983
HpyCH4IV ACGT 2 cut(s) 440, 1017
HpyCH4V TGCA 6 cut(s) 71, 189, 380, 438, 802, 861
HpyF10VI GCNNNNNNNGC 1 cut(s) 65
HpyF3I CTNAG 3 cut(s) 242, 357, 845
HpySE526I ACGT 2 cut(s) 440, 1017
Hsp92II CATG 2 cut(s) 37, 688
HspAI GCGC 2 cut(s) 57, 842
KflI GGGWCCC 1 cut(s) 850
Ksp22I TGATCA 1 cut(s) 781
Kzo9I GATC 4 cut(s) 775, 781, 973, 1080
LmnI GCTCC 1 cut(s) 723
Lsp1109I GCAGC 2 cut(s) 55, 539
LweI GCATC 3 cut(s) 425, 796, 980
MaeI CTAG 4 cut(s) 14, 90, 504, 741
MaeII ACGT 2 cut(s) 440, 1017
MaeIII GTNAC 4 cut(s) 115, 158, 283, 983
MalI GATC 4 cut(s) 777, 783, 975, 1082
MboI GATC 4 cut(s) 775, 781, 973, 1080
MboII GAAGA 4 cut(s) 283, 476, 700, 1171
MfeI CAATTG 1 cut(s) 880
MflI RGATCY 2 cut(s) 973, 1080
MhlI GDGCHC 2 cut(s) 699, 1103
MluCI AATT 8 cut(s) 9, 180, 229, 663, 832, 864, 880, 891
MlyI GAGTC 1 cut(s) 1107
MnlI CCTC 6 cut(s) 213, 229, 292, 522, 584, 686
MroXI GAANNNNTTC 2 cut(s) 174, 212
MseI TTAA 4 cut(s) 332, 759, 795, 867
MslI CAYNNNNRTG 1 cut(s) 380
MspA1I CMGCKG 2 cut(s) 205, 680
MspI CCGG 1 cut(s) 1063
MspR9I CCNGG 4 cut(s) 470, 516, 620, 971
MunI CAATTG 1 cut(s) 880
Mva1269I GAATGC 1 cut(s) 971
MvaI CCWGG 4 cut(s) 470, 516, 620, 971
MvnI CGCG 1 cut(s) 57
MwoI GCNNNNNNNGC 1 cut(s) 65
NdeI CATATG 1 cut(s) 50
NdeII GATC 4 cut(s) 775, 781, 973, 1080
NlaIII CATG 2 cut(s) 37, 688
NlaIV GGNNCC 8 cut(s) 145, 697, 705, 851, 852, 975, 1000, 1082
NspV TTCGAA 1 cut(s) 918
OliI CACNNNNGTG 1 cut(s) 380
PaeR7I CTCGAG 1 cut(s) 1102
PctI GAATGC 1 cut(s) 971
PdmI GAANNNNTTC 2 cut(s) 174, 212
PfeI GAWTC 2 cut(s) 194, 925
PkrI GCNGC 3 cut(s) 56, 70, 529
PleI GAGTC 1 cut(s) 1107
PpsI GAGTC 1 cut(s) 1107
PpuMI RGGWCCY 1 cut(s) 850
Psp124BI GAGCTC 1 cut(s) 1103
Psp1406I AACGTT 1 cut(s) 1017
Psp5II RGGWCCY 1 cut(s) 850
Psp6I CCWGG 4 cut(s) 468, 514, 618, 969
PspFI CCCAGC 1 cut(s) 201
PspGI CCWGG 4 cut(s) 468, 514, 618, 969
PspN4I GGNNCC 8 cut(s) 145, 697, 705, 851, 852, 975, 1000, 1082
PspOMI GGGCCC 1 cut(s) 695
PspPI GGNCC 5 cut(s) 143, 695, 696, 850, 998
PspPPI RGGWCCY 1 cut(s) 850
PspXI VCTCGAGB 1 cut(s) 1102
PstI CTGCAG 1 cut(s) 382
PstNI CAGNNNCTG 1 cut(s) 461
PsuI RGATCY 2 cut(s) 973, 1080
PvuII CAGCTG 2 cut(s) 205, 680
RsaI GTAC 7 cut(s) 64, 128, 454, 534, 562, 714, 1031
RsaNI GTAC 7 cut(s) 63, 127, 453, 533, 561, 713, 1030
RseI CAYNNNNRTG 1 cut(s) 380
SacI GAGCTC 1 cut(s) 1103
SaqAI TTAA 4 cut(s) 332, 759, 795, 867
SatI GCNGC 3 cut(s) 55, 69, 528
Sau3AI GATC 4 cut(s) 775, 781, 973, 1080
Sau96I GGNCC 5 cut(s) 143, 695, 696, 850, 998
ScaI AGTACT 2 cut(s) 64, 562
SchI GAGTC 1 cut(s) 1107
ScrFI CCNGG 4 cut(s) 470, 516, 620, 971
SduI GDGCHC 2 cut(s) 699, 1103
SfaNI GCATC 3 cut(s) 425, 796, 980
SfcI CTRYAG 2 cut(s) 378, 594
Sfr274I CTCGAG 1 cut(s) 1102
SfuI TTCGAA 1 cut(s) 918
SinI GGWCC 2 cut(s) 143, 850
SlaI CTCGAG 1 cut(s) 1102
SmiMI CAYNNNNRTG 1 cut(s) 380
SmlI CTYRAG 3 cut(s) 217, 823, 1102
SmoI CTYRAG 3 cut(s) 217, 823, 1102
SpeI ACTAGT 1 cut(s) 503
Sse9I AATT 8 cut(s) 9, 180, 229, 663, 832, 864, 880, 891
SsiI CCGC 6 cut(s) 55, 326, 414, 432, 483, 873
SspMI CTAG 4 cut(s) 14, 90, 504, 741
SstI GAGCTC 1 cut(s) 1103
StyD4I CCNGG 4 cut(s) 468, 514, 618, 969
StyI CCWWGG 2 cut(s) 699, 1108
TaaI ACNGT 4 cut(s) 494, 537, 815, 983
TaiI ACGT 2 cut(s) 443, 1020
TaqI TCGA 3 cut(s) 790, 918, 1103
TasI AATT 8 cut(s) 9, 180, 229, 663, 832, 864, 880, 891
TatI WGTACW 2 cut(s) 62, 560
TauI GCSGC 1 cut(s) 57
TfiI GAWTC 2 cut(s) 194, 925
Tru1I TTAA 4 cut(s) 332, 759, 795, 867
Tru9I TTAA 4 cut(s) 332, 759, 795, 867
TscAI CASTG 4 cut(s) 382, 387, 583, 652
TseI GCWGC 2 cut(s) 68, 527
TspDTI ATGAA 6 cut(s) 8, 22, 642, 701, 757, 978
TspGWI ACGGA 2 cut(s) 116, 918
TspRI CASTG 4 cut(s) 382, 387, 583, 652
VpaK11BI GGWCC 2 cut(s) 143, 850
XapI RAATTY 1 cut(s) 9
XcmI CCANNNNNNNNNTGG 1 cut(s) 706
XhoI CTCGAG 1 cut(s) 1102
XmiI GTMKAC 1 cut(s) 351
XmnI GAANNNNTTC 2 cut(s) 174, 212
XspI CTAG 4 cut(s) 14, 90, 504, 741
ZrmI AGTACT 2 cut(s) 64, 562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.