Rw0G013120

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00587
Physical Location & Seq
Forward (+)
74700 .. 87328
12629 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G013120.1

Sequence Viewer

Length: 2250 bp
ATGATGATGCAAATTCTAGTTCATCAAATGATCTTCATTTTGCTGTTATCCATATGCCGCGCCAGTACTGCTGCACCACAGATGGCAAGGCCTGGTTGCCCAGAGAAGTGTGGAAATGTTACCATCCCGTACCCTTTCGGGATTGGACCTAGTGAAAGTTGTTACCGTGACAAATGGTTTCAGATCGACTGCAACGAGGGGAAGCCTTTCTTGAGGCGTACCAAATTGGAAGTGCTGAGTATATCTACCGAAGGATGGCTTCAGGTGTCCAGCCCCGTTACATTCTTCTGCGAGGGAAATAATAGTAGCCAAGCGGCGAATTTAAGCGACAGCCCTTTCGTCTACTCTCAGAGCTTCAACATATTCACTGCAGTCAGTTGCAATTCTTTTGTCTCGTTGAGTTCCGCAAACTCTGTTGTTGGCGGATGCATGTCAGTGTGTGATCAAACTTATACATACCTGAGTTGCGATATCGGTAATAACTGTTGTCAGTCTAGAATTCCTCCAAACCTCACTGTTATTGATGCTACCTTATCTGAGAAAACTACAAATTGCAATAAATTTGCCTTCCTGGTTGACAAAGATTGGTTTGAGGCCAATACTTCATCAACAACAATTTCTGACTTTACAGCTGCCGTGAAGAGTATGCGCAAGGTTCCTGTGGCACTAGACTGGCGCATAAACGACGGCACTTGGCCATTTGAATTTAACGAGTTCACTGTTGATTATGATCAGTATCGACATAATGTGTATGATTACGTGAATTTCTCAACGGTTTGGGACCCGTCTTGCTATATTTACACTACTGCCGCAAGCAATTGGTCGGAAATTTATTGTTCCTGCCACAGTGGCTTTGAAGGAAATCCGTATCTCGGGGGATATTCTTGTGATGACATTGATGAATGCCAGGATGCTCACGCATGCTTTGGCCACAGCAAGTGTGTGAACGAGTATGGTTGGTACCGATGTGAGGACGACCGGAGAAAGGCTAAATTGATCCCGAGAAAGGCTAAATTGATCCTTGCCGCAGGTTTGAGCTCGAGCCTTGGACTTTTATTGTTGCTTATTGGTGTATGGTTTGGATACAAGCTCCTGAAGAAAAACAATGAGATAAAACGAAAAAAGATGTTCTTCAAGCGAAATGGTGGTTTATTATTAGAACAACAATTATCGTCAGGTGAAGTTAATGTCGAGAAAATTAAATTGTTCAAATCACAAGAGTTAGAGAAGTCTACCGATAATTTTAATGTGGATAGAATTCTTGGCCAAGGAGGTCAAGGTACTGTGTACAAAGGCATGTTGGAGGACGGGAGAATTGTTGCTGTGAAGAAGTCTAAAATAGTTGATGAAAGCCAACTTTCAGATTTCATCAATGAGGTTGTCATTCTTTCTCAAATTAACCATAGAAATGTGGTTCAACTATTGGGTTGTTGTTTAGAGACAGAAGTTCCTCTTTTGGTTTATGAATTTATACCAAATGGAACCCTTTCTAAGTATATTACAGAGCAGGTTGAAGACTTTTCACTCACATGGAAAATGCGCTTACGAATTGCCACAGAAATTGCAGGAGCTCTCTCGTACTTACACTATGCAGCTTCCTTTCCAATTTATCATAGAGATATCAAGTCTACCAACATACTCTTAGATGATAAATACAGAGCAAAAGTTGCTGACTTTGGAACTTCGAGATCAATTGCTATTGACCAAACTCACCTGACCACATCACTTGTACATGGCACATTCGGTTACTTGGACCCTGAATACTTTCAGTCAAGCCAATTTACAGAGAAAAGTGATGTGTATAGCTTCGGGGTTGTTCTTGTTGAGCTCTTAACGGGACAAAAACCAATTTCTTTTCTAAGGTCAGAGGATGAAGGCAGAAGTCTTGCCACATATTTCATTATTTCCATGCACAAAGATCGACTATTTGAAATTGTTGATGCTCAAGTTTTGAAGGAAGGATCGAAAGAAGATATCATAATAGTGGCAAACCTTGCAAGAAGATGTCTGAATTTGAACGGAAGGAAGCGCCCTACAATGAGAGAGGTCACAGCTGAGCTAGAAGTGATTCAAATGACAAAAAAGACTTCTAATGGCGAACAAAACTATGAAGAGGTTGAATTTGTCAGAACTGAATCAGTAGAGCCATGGGACATTGCTTCAAGTTCAACGGGAAAGGGATCAGCTTTGGATGTTGGTCGGGTTTCATCATTCCATGAAATCCCCCTATTATCTTTCAAGTCAAGGTGA

Protein Analysis

749

Amino Acids

84.39

Weight (kDa)

5.79

Isoelectric Point (pI)

39.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 84 3.1e-12 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 415 - 684 3.4e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 417 - 687 1.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 650
Acc36I ACCTGC 2 cut(s) 1019, 1498
Acc65I GGTACC 1 cut(s) 960
AccB1I GGYRCC 1 cut(s) 960
AccI GTMKAC 3 cut(s) 342, 1232, 1628
AccII CGCG 1 cut(s) 60
AciI CCGC 6 cut(s) 58, 314, 405, 423, 810, 1026
AclWI GGATC 4 cut(s) 991, 1012, 1969, 2188
AcoI YGGCCR 3 cut(s) 695, 928, 1264
AcuI CTGAAG 2 cut(s) 245, 1115
AfaI GTAC 8 cut(s) 67, 131, 220, 962, 1282, 1289, 1580, 1731
AfiI CCNNNNNNNGG 5 cut(s) 255, 872, 970, 985, 1006
AjnI CCWGG 3 cut(s) 91, 570, 906
Alw21I GWGCWC 3 cut(s) 1040, 1573, 1830
Alw26I GTCTC 2 cut(s) 397, 1433
AlwI GGATC 4 cut(s) 991, 1012, 1969, 2188
Ama87I CYCGRG 3 cut(s) 872, 1000, 1039
AoxI GGCC 5 cut(s) 89, 594, 695, 928, 1264
ApeKI GCWGC 3 cut(s) 71, 632, 1592
ArsI GACNNNNNNTTYG 2 cut(s) 320, 352
Asp700I GAANNNNTTC 4 cut(s) 206, 1486, 1764, 2067
Asp718I GGTACC 1 cut(s) 960
AspLEI GCGC 5 cut(s) 62, 651, 678, 1542, 2031
AspS9I GGNCC 3 cut(s) 146, 781, 1753
AsuHPI GGTGA 2 cut(s) 1190, 1703
AvaI CYCGRG 3 cut(s) 872, 1000, 1039
AvaII GGWCC 3 cut(s) 146, 781, 1753
BaeI ACNNNNGTAYC 2 cut(s) 952, 985
BalI TGGCCA 3 cut(s) 697, 930, 1266
BanI GGYRCC 1 cut(s) 960
BanII GRGCYC 3 cut(s) 1040, 1573, 1830
BbsI GAAGAC 1 cut(s) 1521
Bbv12I GWGCWC 3 cut(s) 1040, 1573, 1830
BbvI GCAGC 3 cut(s) 58, 619, 1604
BccI CCATC 3 cut(s) 76, 131, 249
BceAI ACGGC 2 cut(s) 620, 703
BcgI CGANNNNNNTGC 2 cut(s) 1901, 1935
BciT130I CCWGG 3 cut(s) 93, 572, 908
BciVI GTATCC 1 cut(s) 1076
BclI TGATCA 2 cut(s) 442, 730
BcoDI GTCTC 2 cut(s) 397, 1433
BfaI CTAG 5 cut(s) 17, 150, 495, 668, 2060
BfmI CTRYAG 1 cut(s) 369
BfoI RGCGCY 1 cut(s) 2032
BfuAI ACCTGC 2 cut(s) 1019, 1498
BfuI GTATCC 1 cut(s) 1076
BglI GCCNNNNNGGC 1 cut(s) 849
BisI GCNGC 7 cut(s) 58, 72, 315, 633, 810, 1026, 1593
BlpI GCTNAGC 1 cut(s) 2055
BlsI GCNGC 7 cut(s) 59, 73, 316, 634, 811, 1027, 1594
BmcAI AGTACT 1 cut(s) 67
Bme1390I CCNGG 3 cut(s) 93, 572, 908
Bme18I GGWCC 3 cut(s) 146, 781, 1753
BmeT110I CYCGRG 3 cut(s) 872, 1000, 1039
BmgT120I GGNCC 3 cut(s) 146, 781, 1753
BmiI GGNNCC 6 cut(s) 657, 782, 783, 962, 1483, 1755
BmrFI CCNGG 3 cut(s) 93, 572, 908
BmsI GCATC 4 cut(s) 416, 514, 901, 1930
BpiI GAAGAC 1 cut(s) 1521
Bpu1102I GCTNAGC 1 cut(s) 2055
BpuEI CTTGAG 2 cut(s) 232, 1929
BsaAI YACGTR 1 cut(s) 760
BsaBI GATNNNNATC 2 cut(s) 729, 735
BsaJI CCNNGG 3 cut(s) 1045, 1267, 2147
BsaWI WCCGGW 1 cut(s) 978
Bsc4I CCNNNNNNNGG 5 cut(s) 255, 872, 970, 985, 1006
Bse1I ACTGG 2 cut(s) 63, 677
Bse3DI GCAATG 1 cut(s) 2154
Bse8I GATNNNNATC 2 cut(s) 729, 735
BseBI CCWGG 3 cut(s) 93, 572, 908
BseDI CCNNGG 3 cut(s) 1045, 1267, 2147
BseGI GGATG 6 cut(s) 123, 260, 431, 916, 1876, 2197
BseJI GATNNNNATC 2 cut(s) 729, 735
BseLI CCNNNNNNNGG 5 cut(s) 255, 872, 970, 985, 1006
BseMI GCAATG 1 cut(s) 2154
BseMII CTCAG 5 cut(s) 227, 362, 452, 528, 2046
BseNI ACTGG 2 cut(s) 63, 677
BseXI GCAGC 3 cut(s) 58, 619, 1604
BsgI GTGCAG 1 cut(s) 57
Bsh1236I CGCG 1 cut(s) 60
Bsh1285I CGRYCG 1 cut(s) 979
BshFI GGCC 5 cut(s) 91, 596, 697, 930, 1266
BshNI GGYRCC 1 cut(s) 960
BsiEI CGRYCG 1 cut(s) 979
BsiHKAI GWGCWC 3 cut(s) 1040, 1573, 1830
BsiHKCI CYCGRG 3 cut(s) 872, 1000, 1039
BsiSI CCGG 1 cut(s) 979
BslFI GGGAC 3 cut(s) 794, 1851, 2165
BslI CCNNNNNNNGG 5 cut(s) 255, 872, 970, 985, 1006
BsmAI GTCTC 2 cut(s) 397, 1433
BsmFI GGGAC 3 cut(s) 794, 1851, 2165
BsmI GAATGC 1 cut(s) 908
BsnI GGCC 5 cut(s) 91, 596, 697, 930, 1266
BsoBI CYCGRG 3 cut(s) 872, 1000, 1039
Bsp1286I GDGCHC 3 cut(s) 1040, 1573, 1830
Bsp1407I TGTACA 2 cut(s) 1287, 1729
Bsp1720I GCTNAGC 1 cut(s) 2055
Bsp19I CCATGG 1 cut(s) 2147
BspACI CCGC 6 cut(s) 58, 314, 405, 423, 810, 1026
BspANI GGCC 5 cut(s) 91, 596, 697, 930, 1266
BspCNI CTCAG 5 cut(s) 228, 361, 453, 529, 2047
BspFNI CGCG 1 cut(s) 60
BspLI GGNNCC 6 cut(s) 657, 782, 783, 962, 1483, 1755
BspMAI CTGCAG 1 cut(s) 373
BspMI ACCTGC 2 cut(s) 1019, 1498
BspPI GGATC 4 cut(s) 991, 1012, 1969, 2188
BspT107I GGYRCC 1 cut(s) 960
BsrDI GCAATG 1 cut(s) 2154
BsrGI TGTACA 2 cut(s) 1287, 1729
BsrI ACTGG 2 cut(s) 63, 677
BssECI CCNNGG 3 cut(s) 1045, 1267, 2147
BssT1I CCWWGG 3 cut(s) 1045, 1267, 2147
Bst2UI CCWGG 3 cut(s) 93, 572, 908
Bst4CI ACNGT 7 cut(s) 167, 485, 517, 721, 775, 848, 1285
Bst6I CTCTTC 2 cut(s) 635, 2106
BstAPI GCANNNNNTGC 2 cut(s) 1667, 1994
BstAUI TGTACA 2 cut(s) 1287, 1729
BstBAI YACGTR 1 cut(s) 760
BstC8I GCNNGC 2 cut(s) 814, 922
BstDEI CTNAG 8 cut(s) 236, 348, 461, 537, 1491, 1642, 1859, 2055
BstDSI CCRYGG 1 cut(s) 2147
BstF5I GGATG 6 cut(s) 123, 260, 431, 916, 1876, 2197
BstFNI CGCG 1 cut(s) 60
BstH2I RGCGCY 1 cut(s) 2032
BstHHI GCGC 5 cut(s) 62, 651, 678, 1542, 2031
BstMAI GTCTC 2 cut(s) 397, 1433
BstMCI CGRYCG 1 cut(s) 979
BstMWI GCNNNNNNNGC 4 cut(s) 68, 849, 1667, 1994
BstNI CCWGG 3 cut(s) 93, 572, 908
BstNSI RCATGY 3 cut(s) 433, 924, 1300
BstSCI CCNGG 3 cut(s) 91, 570, 906
BstSFI CTRYAG 1 cut(s) 369
BstUI CGCG 1 cut(s) 60
BstV1I GCAGC 3 cut(s) 58, 619, 1604
BstV2I GAAGAC 1 cut(s) 1521
BsuI GTATCC 1 cut(s) 1076
BsuRI GGCC 5 cut(s) 91, 596, 697, 930, 1266
BtgI CCRYGG 1 cut(s) 2147
BtsCI GGATG 6 cut(s) 123, 260, 431, 916, 1876, 2197
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 5 cut(s) 366, 441, 513, 717, 853
BveI ACCTGC 2 cut(s) 1019, 1498
Cac8I GCNNGC 2 cut(s) 814, 922
CfoI GCGC 5 cut(s) 62, 651, 678, 1542, 2031
Cfr13I GGNCC 3 cut(s) 146, 781, 1753
Csp6I GTAC 8 cut(s) 66, 130, 219, 961, 1281, 1288, 1579, 1730
CspCI CAANNNNNGTGG 4 cut(s) 1543, 1578, 1708, 1743
CviAII CATG 8 cut(s) 430, 921, 1297, 1530, 1733, 1909, 2148, 2216
CviQI GTAC 8 cut(s) 66, 130, 219, 961, 1281, 1288, 1579, 1730
DdeI CTNAG 8 cut(s) 236, 348, 461, 537, 1491, 1642, 1859, 2055
EaeI YGGCCR 3 cut(s) 695, 928, 1264
Eam1104I CTCTTC 2 cut(s) 635, 2106
EarI CTCTTC 2 cut(s) 635, 2106
EciI GGCGGA 1 cut(s) 438
Ecl136II GAGCTC 3 cut(s) 1038, 1571, 1828
Eco130I CCWWGG 3 cut(s) 1045, 1267, 2147
Eco147I AGGCCT 1 cut(s) 91
Eco24I GRGCYC 3 cut(s) 1040, 1573, 1830
Eco32I GATATC 3 cut(s) 472, 1621, 1975
Eco47I GGWCC 3 cut(s) 146, 781, 1753
Eco53kI GAGCTC 3 cut(s) 1038, 1571, 1828
Eco57I CTGAAG 2 cut(s) 245, 1115
Eco88I CYCGRG 3 cut(s) 872, 1000, 1039
EcoICRI GAGCTC 3 cut(s) 1038, 1571, 1828
EcoO109I RGGNCCY 1 cut(s) 781
EcoRI GAATTC 2 cut(s) 498, 1257
EcoRII CCWGG 3 cut(s) 91, 570, 906
EcoRV GATATC 3 cut(s) 472, 1621, 1975
EcoT14I CCWWGG 3 cut(s) 1045, 1267, 2147
EcoT22I ATGCAT 1 cut(s) 431
EcoT38I GRGCYC 3 cut(s) 1040, 1573, 1830
ErhI CCWWGG 3 cut(s) 1045, 1267, 2147
FaeI CATG 8 cut(s) 433, 924, 1300, 1533, 1736, 1912, 2151, 2219
FalI AAGNNNNNCTT 8 cut(s) 194, 226, 243, 275, 1115, 1147, 1437, 1469
FaqI GGGAC 3 cut(s) 794, 1851, 2165
FatI CATG 8 cut(s) 429, 920, 1296, 1529, 1732, 1908, 2147, 2215
FauNDI CATATG 1 cut(s) 53
FbaI TGATCA 2 cut(s) 442, 730
FblI GTMKAC 3 cut(s) 342, 1232, 1628
Fnu4HI GCNGC 7 cut(s) 58, 72, 315, 633, 810, 1026, 1593
FokI GGATG 6 cut(s) 110, 267, 438, 923, 1883, 2204
FriOI GRGCYC 3 cut(s) 1040, 1573, 1830
Fsp4HI GCNGC 7 cut(s) 58, 72, 315, 633, 810, 1026, 1593
FspBI CTAG 5 cut(s) 17, 150, 495, 668, 2060
FspI TGCGCA 1 cut(s) 650
GlaI GCGC 5 cut(s) 61, 650, 677, 1541, 2030
GluI GCNGC 7 cut(s) 58, 72, 315, 633, 810, 1026, 1593
HaeII RGCGCY 1 cut(s) 2032
HaeIII GGCC 5 cut(s) 91, 596, 697, 930, 1266
HapII CCGG 1 cut(s) 979
HhaI GCGC 5 cut(s) 62, 651, 678, 1542, 2031
Hin1II CATG 8 cut(s) 433, 924, 1300, 1533, 1736, 1912, 2151, 2219
Hin6I GCGC 5 cut(s) 60, 649, 676, 1540, 2029
HinP1I GCGC 5 cut(s) 60, 649, 676, 1540, 2029
HincII GTYRAC 1 cut(s) 577
HindII GTYRAC 1 cut(s) 577
HinfI GANTC 2 cut(s) 2068, 2135
HpaII CCGG 1 cut(s) 979
HphI GGTGA 2 cut(s) 1190, 1703
Hpy166II GTNNAC 7 cut(s) 343, 577, 717, 946, 1233, 1288, 1629
Hpy188I TCNGA 9 cut(s) 183, 351, 538, 622, 826, 1363, 1867, 2010, 2129
Hpy188III TCNNGA 7 cut(s) 139, 211, 495, 1000, 1093, 1192, 1686
Hpy8I GTNNAC 7 cut(s) 343, 577, 717, 946, 1233, 1288, 1629
Hpy99I CGWCG 1 cut(s) 689
HpyAV CCTTC 7 cut(s) 245, 577, 851, 1868, 1948, 1952, 2016
HpyCH4III ACNGT 7 cut(s) 167, 485, 517, 721, 775, 848, 1285
HpyCH4IV ACGT 1 cut(s) 759
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 849, 1667, 1994
HpyF3I CTNAG 8 cut(s) 236, 348, 461, 537, 1491, 1642, 1859, 2055
HpySE526I ACGT 1 cut(s) 759
Hsp92II CATG 8 cut(s) 433, 924, 1300, 1533, 1736, 1912, 2151, 2219
HspAI GCGC 5 cut(s) 60, 649, 676, 1540, 2029
KflI GGGWCCC 1 cut(s) 781
KpnI GGTACC 1 cut(s) 964
Ksp22I TGATCA 2 cut(s) 442, 730
LmnI GCTCC 2 cut(s) 1095, 1568
Lsp1109I GCAGC 3 cut(s) 58, 619, 1604
LweI GCATC 4 cut(s) 416, 514, 901, 1930
MaeI CTAG 5 cut(s) 17, 150, 495, 668, 2060
MaeII ACGT 1 cut(s) 759
MaeIII GTNAC 6 cut(s) 118, 161, 167, 277, 1745, 2047
MfeI CAATTG 2 cut(s) 817, 1692
MhlI GDGCHC 3 cut(s) 1040, 1573, 1830
MlsI TGGCCA 3 cut(s) 697, 930, 1266
MluNI TGGCCA 3 cut(s) 697, 930, 1266
MmeI TCCRAC 2 cut(s) 804, 1281
Mox20I TGGCCA 3 cut(s) 697, 930, 1266
Mph1103I ATGCAT 1 cut(s) 431
MroXI GAANNNNTTC 4 cut(s) 206, 1486, 1764, 2067
MscI TGGCCA 3 cut(s) 697, 930, 1266
MseI TTAA 7 cut(s) 323, 708, 1185, 1200, 1245, 1398, 1832
MslI CAYNNNNRTG 4 cut(s) 434, 1407, 1528, 1982
Msp20I TGGCCA 3 cut(s) 697, 930, 1266
MspA1I CMGCKG 2 cut(s) 632, 2054
MspI CCGG 1 cut(s) 979
MspR9I CCNGG 3 cut(s) 93, 572, 908
MunI CAATTG 2 cut(s) 817, 1692
Mva1269I GAATGC 1 cut(s) 908
MvaI CCWGG 3 cut(s) 93, 572, 908
MvnI CGCG 1 cut(s) 60
MwoI GCNNNNNNNGC 4 cut(s) 68, 849, 1667, 1994
NcoI CCATGG 1 cut(s) 2147
NdeI CATATG 1 cut(s) 53
NlaIII CATG 8 cut(s) 433, 924, 1300, 1533, 1736, 1912, 2151, 2219
NlaIV GGNNCC 6 cut(s) 657, 782, 783, 962, 1483, 1755
NmuCI GTSAC 2 cut(s) 167, 2047
NsbI TGCGCA 1 cut(s) 650
NsiI ATGCAT 1 cut(s) 431
NspI RCATGY 3 cut(s) 433, 924, 1300
PaeI GCATGC 1 cut(s) 924
PaeR7I CTCGAG 1 cut(s) 1039
PceI AGGCCT 1 cut(s) 91
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PctI GAATGC 1 cut(s) 908
PdmI GAANNNNTTC 4 cut(s) 206, 1486, 1764, 2067
PfeI GAWTC 2 cut(s) 2068, 2135
PkrI GCNGC 7 cut(s) 59, 73, 316, 634, 811, 1027, 1594
Ppu21I YACGTR 1 cut(s) 760
PpuMI RGGWCCY 1 cut(s) 781
Psp124BI GAGCTC 3 cut(s) 1040, 1573, 1830
Psp5II RGGWCCY 1 cut(s) 781
Psp6I CCWGG 3 cut(s) 91, 570, 906
PspGI CCWGG 3 cut(s) 91, 570, 906
PspN4I GGNNCC 6 cut(s) 657, 782, 783, 962, 1483, 1755
PspPI GGNCC 3 cut(s) 146, 781, 1753
PspPPI RGGWCCY 1 cut(s) 781
PspXI VCTCGAGB 1 cut(s) 1039
PstI CTGCAG 1 cut(s) 373
PvuII CAGCTG 2 cut(s) 632, 2054
RsaI GTAC 8 cut(s) 67, 131, 220, 962, 1282, 1289, 1580, 1731
RsaNI GTAC 8 cut(s) 66, 130, 219, 961, 1281, 1288, 1579, 1730
RseI CAYNNNNRTG 4 cut(s) 434, 1407, 1528, 1982
SacI GAGCTC 3 cut(s) 1040, 1573, 1830
SaqAI TTAA 7 cut(s) 323, 708, 1185, 1200, 1245, 1398, 1832
SatI GCNGC 7 cut(s) 58, 72, 315, 633, 810, 1026, 1593
Sau96I GGNCC 3 cut(s) 146, 781, 1753
ScaI AGTACT 1 cut(s) 67
ScrFI CCNGG 3 cut(s) 93, 572, 908
SduI GDGCHC 3 cut(s) 1040, 1573, 1830
SfaNI GCATC 4 cut(s) 416, 514, 901, 1930
SfcI CTRYAG 1 cut(s) 369
Sfr274I CTCGAG 1 cut(s) 1039
SinI GGWCC 3 cut(s) 146, 781, 1753
SlaI CTCGAG 1 cut(s) 1039
SmiMI CAYNNNNRTG 4 cut(s) 434, 1407, 1528, 1982
SmlI CTYRAG 3 cut(s) 211, 1039, 1944
SmoI CTYRAG 3 cut(s) 211, 1039, 1944
SphI GCATGC 1 cut(s) 924
SseBI AGGCCT 1 cut(s) 91
SsiI CCGC 6 cut(s) 58, 314, 405, 423, 810, 1026
SspMI CTAG 5 cut(s) 17, 150, 495, 668, 2060
SstI GAGCTC 3 cut(s) 1040, 1573, 1830
StuI AGGCCT 1 cut(s) 91
StyD4I CCNGG 3 cut(s) 91, 570, 906
StyI CCWWGG 3 cut(s) 1045, 1267, 2147
TaaI ACNGT 7 cut(s) 167, 485, 517, 721, 775, 848, 1285
TaiI ACGT 1 cut(s) 762
TaqI TCGA 7 cut(s) 186, 739, 1040, 1191, 1685, 1921, 1964
TatI WGTACW 3 cut(s) 65, 1287, 1729
TauI GCSGC 4 cut(s) 60, 317, 812, 1028
TfiI GAWTC 2 cut(s) 2068, 2135
Tru1I TTAA 7 cut(s) 323, 708, 1185, 1200, 1245, 1398, 1832
Tru9I TTAA 7 cut(s) 323, 708, 1185, 1200, 1245, 1398, 1832
TscAI CASTG 5 cut(s) 373, 441, 520, 724, 853
TseFI GTSAC 2 cut(s) 167, 2047
TseI GCWGC 3 cut(s) 71, 632, 1592
Tsp45I GTSAC 2 cut(s) 167, 2047
TspGWI ACGGA 2 cut(s) 855, 2034
TspRI CASTG 5 cut(s) 373, 441, 520, 724, 853
VpaK11BI GGWCC 3 cut(s) 146, 781, 1753
XbaI TCTAGA 1 cut(s) 494
XceI RCATGY 3 cut(s) 433, 924, 1300
XhoI CTCGAG 1 cut(s) 1039
XmiI GTMKAC 3 cut(s) 342, 1232, 1628
XmnI GAANNNNTTC 4 cut(s) 206, 1486, 1764, 2067
XspI CTAG 5 cut(s) 17, 150, 495, 668, 2060
ZrmI AGTACT 1 cut(s) 67
Zsp2I ATGCAT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.