Rroxscaffold_2G00095460

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
16814105 .. 16824855
10751 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00095460.1

Sequence Viewer

Length: 1857 bp
ATGACCGCCAATTTGCTTTACAGCTTCAATCATACTTCTTCTAGAGTACATCTTCGATCAGAAGAATTAATTATGGTGCAAATGCCAGTTCATCAAATGATATTCATTTTGCTGTTATCCATATGCTACGCAAGTACTGCTGCACCACAGATGGCAAAGCCTGGTTGCCAAGAGAAGTGTGGAAGTGTTATCATCCCGTACCCTTTCGGGATTGGACCTAATGCAAGTTGTTACTATGACGAATGGTATCAAATCGACTGCAACGAATCTACCGAGTGGAAGCCTTTCTTGAGGCGTACCAAATTGGAGGTGCTGAATATATCGACCAACAATAGGCTTCAGGTGTACAGCCCCGTTACATTCTTCTGCGAGGGAAATAATAGAAGCCAACTGGCGGATTTAAGGGACAGCCCTTTCTTCTTCTCTCGACTCTACAACACATTCACTGCAGTGAGTTGCGATTCCTTTGCCCAGTTGAATTCCACAGACTTTGTTGTTGGCGGATGCGAGTCAGTGTGTGATTACTCTGGACACCTGAGTTACGATCTCGGTATTAACTGTTGTCAGATTAGTATTCCTCCATACCTCAGTGTAATTAATATCACCTTATTAGATGAGAGTCATGAGACTAATACTACAGATTGCACCAAGCTTGCCTTCCTGATTGACAAAGATTGGGTGAACGGAACCATCAATTCATCATCAACAATTTCGGACCTTGCAGCTCTCTTGAAGAGAATAGGCAAGGTTCCTATATCACTAAGATGGAGGATAAGCAACGACACTAGGTCATTTGAATTATTTAACCCGTCCAAATTTTCAAAGCTTCCGGTCGACCCGTCTTGCCAGATTAACACTTCTCCCCCAGTCAAAAATGCGGAAATTGATTGTTCATGCCGCGAGGGGTTCGAAGGAAATCCGTATCTCGGGGAAAAATCTTGTGATGATATTAATGAATGCCAAGATGCTCACCGCCGATGCTTTGGCAACAGCAAGTGCGTGAACGAGTATGGTTCGTACCGATGTGAGGACGACGGGAGAAAGGCTAAATTGATCATTGCCACAGGCCAACCACCCTCCCTTCCTATTTCAATTGGGCCGGACAAAGGAGCCAGCCTTAGGGAGTTAGAGAAGTCTACCGATAATTTTAATGTGGATAGAATTCTTGGCCAAGGAGGTCAAGGTACTGTATACAAAGGCATGTTGGAGGATGGGAGAATTGTTGCTGTGAAGAAGTCTAAAATAGTTGATGAAAGCCAACTTTCAAGATTCATCAATGAGGTTGTCATTCTTTCCCAAATCAACCATAGAAATGTGGTTCAACTATTTGGTTGTTGTTTAGAGACTGAAGTTCCTCTCTTGGTTTATGAATTTATACCAAATGGAACCCTTTCCAAGTATATTACAGAGCAGGTTGAAGACTTTCCACTCACATGGAAAATGCGCTTAAGAATTGCCACAGAAATTGCAGGAGCTCTCTCATACTTACACTATGCAGCTCCCTTTCCAATTTATCATAGAGATATCAAGTCTACAAACATACTCTTAGATGATAAGTACAGAGCAAAAGTTGCTGACTTTGGAACTTCGAGATCAATTGCTATTGATCAAACTCACTTGACCACATCACTTGTACATGGCACATTCGGTTACTTGGACCCCGAATACTTTCGGTCAAGCCAATTTACGGAGAAAAGTGATGTGTATAGCTTTGGGGTTGTTCTTGTTGAGCTCTTAACAGGGCAAAAACCAATTTCTTTTCTAAGGTCGAGGATGAAGGCAGAAGTCTTGCCACGTATTTCATTATTTCCATGCACAAACATCGTCTATTTGAAATTGTTGATACTCAAGTTTTGA

Protein Analysis

618

Amino Acids

69.55

Weight (kDa)

6.06

Isoelectric Point (pI)

42.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 56 - 115 2e-12 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 383 - 586 1e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 385 - 591 1e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1402
AccI GTMKAC 4 cut(s) 834, 1136, 1191, 1532
AccII CGCG 1 cut(s) 900
AciI CCGC 6 cut(s) 6, 395, 501, 878, 898, 973
AcoI YGGCCR 1 cut(s) 1168
AcsI RAATTY 4 cut(s) 478, 815, 1161, 1370
AcuI CTGAAG 2 cut(s) 323, 1368
AfaI GTAC 9 cut(s) 48, 136, 200, 298, 347, 1019, 1186, 1559, 1635
AfiI CCNNNNNNNGG 7 cut(s) 333, 394, 926, 1027, 1106, 1119, 1687
AflII CTTAAG 1 cut(s) 1447
AhdI GACNNNNNGTC 1 cut(s) 787
AjnI CCWGG 1 cut(s) 160
AjuI GAANNNNNNNTTGG 2 cut(s) 641, 673
AleI CACNNNNGTG 1 cut(s) 449
AluBI AGCT 8 cut(s) 24, 652, 725, 826, 1475, 1499, 1710, 1732
AluI AGCT 8 cut(s) 24, 652, 725, 826, 1475, 1499, 1710, 1732
Alw21I GWGCWC 2 cut(s) 1477, 1734
Alw26I GTCTC 2 cut(s) 620, 1337
Ama87I CYCGRG 1 cut(s) 926
AoxI GGCC 3 cut(s) 1066, 1097, 1168
ApeKI GCWGC 3 cut(s) 140, 722, 1496
ApoI RAATTY 4 cut(s) 478, 815, 1161, 1370
ArsI GACNNNNNNTTYG 1 cut(s) 27
AseI ATTAAT 3 cut(s) 68, 597, 951
Asp700I GAANNNNTTC 4 cut(s) 284, 1390, 1422, 1668
AspLEI GCGC 1 cut(s) 1446
AspS9I GGNCC 4 cut(s) 215, 715, 1097, 1657
AsuHPI GGTGA 3 cut(s) 595, 691, 962
AsuII TTCGAA 1 cut(s) 909
AvaI CYCGRG 1 cut(s) 926
AvaII GGWCC 3 cut(s) 215, 715, 1657
AxyI CCTNAGG 1 cut(s) 1118
BaeI ACNNNNGTAYC 1 cut(s) 1835
BalI TGGCCA 1 cut(s) 1170
BanII GRGCYC 2 cut(s) 1477, 1734
BbsI GAAGAC 1 cut(s) 1425
Bbv12I GWGCWC 2 cut(s) 1477, 1734
BbvI GCAGC 3 cut(s) 127, 734, 1508
BccI CCATC 4 cut(s) 145, 698, 759, 1205
BcgI CGANNNNNNTGC 4 cut(s) 449, 483, 1804, 1838
BciT130I CCWGG 1 cut(s) 162
BclI TGATCA 2 cut(s) 1053, 1606
BcoDI GTCTC 2 cut(s) 620, 1337
BfaI CTAG 2 cut(s) 42, 786
BfmI CTRYAG 2 cut(s) 447, 636
BfrI CTTAAG 1 cut(s) 1447
BfuAI ACCTGC 1 cut(s) 1402
BisI GCNGC 4 cut(s) 141, 723, 898, 1497
BlsI GCNGC 4 cut(s) 142, 724, 899, 1498
BmcAI AGTACT 1 cut(s) 136
Bme1390I CCNGG 1 cut(s) 162
Bme18I GGWCC 3 cut(s) 215, 715, 1657
BmeRI GACNNNNNGTC 1 cut(s) 787
BmeT110I CYCGRG 1 cut(s) 926
BmgT120I GGNCC 4 cut(s) 215, 715, 1097, 1657
BmiI GGNNCC 5 cut(s) 688, 750, 1111, 1387, 1659
BmrFI CCNGG 1 cut(s) 162
BmrI ACTGGG 2 cut(s) 466, 860
BmsI GCATC 3 cut(s) 494, 955, 968
BmuI ACTGGG 2 cut(s) 466, 860
BpiI GAAGAC 1 cut(s) 1425
Bpu14I TTCGAA 1 cut(s) 909
BpuEI CTTGAG 2 cut(s) 310, 1832
BsaAI YACGTR 1 cut(s) 1796
BsaJI CCNNGG 1 cut(s) 1171
BsaWI WCCGGW 1 cut(s) 829
Bsc4I CCNNNNNNNGG 7 cut(s) 333, 394, 926, 1027, 1106, 1119, 1687
Bse1I ACTGG 4 cut(s) 86, 396, 472, 866
Bse21I CCTNAGG 1 cut(s) 1118
Bse3DI GCAATG 1 cut(s) 1056
BseBI CCWGG 1 cut(s) 162
BseDI CCNNGG 1 cut(s) 1171
BseGI GGATG 4 cut(s) 192, 509, 1216, 1779
BseLI CCNNNNNNNGG 7 cut(s) 333, 394, 926, 1027, 1106, 1119, 1687
BseMI GCAATG 1 cut(s) 1056
BseMII CTCAG 2 cut(s) 527, 601
BseNI ACTGG 4 cut(s) 86, 396, 472, 866
BseXI GCAGC 3 cut(s) 127, 734, 1508
BsgI GTGCAG 1 cut(s) 126
Bsh1236I CGCG 1 cut(s) 900
Bsh1285I CGRYCG 1 cut(s) 834
BshFI GGCC 3 cut(s) 1068, 1099, 1170
BsiEI CGRYCG 1 cut(s) 834
BsiHKAI GWGCWC 2 cut(s) 1477, 1734
BsiHKCI CYCGRG 1 cut(s) 926
BsiSI CCGG 2 cut(s) 830, 1100
BslFI GGGAC 1 cut(s) 419
BslI CCNNNNNNNGG 7 cut(s) 333, 394, 926, 1027, 1106, 1119, 1687
BsmAI GTCTC 2 cut(s) 620, 1337
BsmFI GGGAC 1 cut(s) 419
BsmI GAATGC 1 cut(s) 962
BsnI GGCC 3 cut(s) 1068, 1099, 1170
BsoBI CYCGRG 1 cut(s) 926
Bsp119I TTCGAA 1 cut(s) 909
Bsp1286I GDGCHC 2 cut(s) 1477, 1734
Bsp1407I TGTACA 2 cut(s) 345, 1633
Bsp143I GATC 5 cut(s) 56, 544, 1053, 1592, 1606
BspACI CCGC 6 cut(s) 6, 395, 501, 878, 898, 973
BspANI GGCC 3 cut(s) 1068, 1099, 1170
BspCNI CTCAG 2 cut(s) 528, 600
BspFNI CGCG 1 cut(s) 900
BspHI TCATGA 1 cut(s) 622
BspLI GGNNCC 5 cut(s) 688, 750, 1111, 1387, 1659
BspMAI CTGCAG 1 cut(s) 451
BspMI ACCTGC 1 cut(s) 1402
BspT104I TTCGAA 1 cut(s) 909
BspTI CTTAAG 1 cut(s) 1447
BsrDI GCAATG 1 cut(s) 1056
BsrGI TGTACA 2 cut(s) 345, 1633
BsrI ACTGG 4 cut(s) 86, 396, 472, 866
BssECI CCNNGG 1 cut(s) 1171
BssMI GATC 5 cut(s) 56, 544, 1053, 1592, 1606
BssNAI GTATAC 1 cut(s) 1192
BssT1I CCWWGG 1 cut(s) 1171
Bst1107I GTATAC 1 cut(s) 1192
Bst2UI CCWGG 1 cut(s) 162
Bst4CI ACNGT 2 cut(s) 560, 1189
Bst6I CTCTTC 1 cut(s) 728
BstAFI CTTAAG 1 cut(s) 1447
BstAPI GCANNNNNTGC 2 cut(s) 137, 1571
BstAUI TGTACA 2 cut(s) 345, 1633
BstBAI YACGTR 1 cut(s) 1796
BstBI TTCGAA 1 cut(s) 909
BstC8I GCNNGC 2 cut(s) 654, 1114
BstDEI CTNAG 6 cut(s) 536, 587, 761, 1118, 1546, 1763
BstF5I GGATG 4 cut(s) 192, 509, 1216, 1779
BstFNI CGCG 1 cut(s) 900
BstHHI GCGC 1 cut(s) 1446
BstKTI GATC 5 cut(s) 59, 547, 1056, 1595, 1609
BstMAI GTCTC 2 cut(s) 620, 1337
BstMBI GATC 5 cut(s) 56, 544, 1053, 1592, 1606
BstMCI CGRYCG 1 cut(s) 834
BstMWI GCNNNNNNNGC 2 cut(s) 137, 1571
BstNI CCWGG 1 cut(s) 162
BstNSI RCATGY 1 cut(s) 1204
BstSCI CCNGG 1 cut(s) 160
BstSFI CTRYAG 2 cut(s) 447, 636
BstUI CGCG 1 cut(s) 900
BstV1I GCAGC 3 cut(s) 127, 734, 1508
BstV2I GAAGAC 1 cut(s) 1425
BstXI CCANNNNNNTGG 1 cut(s) 1434
BstZ17I GTATAC 1 cut(s) 1192
Bsu36I CCTNAGG 1 cut(s) 1118
BsuRI GGCC 3 cut(s) 1068, 1099, 1170
BtsCI GGATG 4 cut(s) 192, 509, 1216, 1779
BtsI GCAGTG 2 cut(s) 444, 456
BtsIMutI CAGTG 4 cut(s) 444, 456, 519, 595
BveI ACCTGC 1 cut(s) 1402
Cac8I GCNNGC 2 cut(s) 654, 1114
CciI TCATGA 1 cut(s) 622
CfoI GCGC 1 cut(s) 1446
Cfr13I GGNCC 4 cut(s) 215, 715, 1097, 1657
Csp6I GTAC 9 cut(s) 47, 135, 199, 297, 346, 1018, 1185, 1558, 1634
CspCI CAANNNNNGTGG 6 cut(s) 472, 507, 1447, 1482, 1612, 1647
CviAII CATG 6 cut(s) 623, 894, 1201, 1434, 1637, 1812
CviQI GTAC 9 cut(s) 47, 135, 199, 297, 346, 1018, 1185, 1558, 1634
DdeI CTNAG 6 cut(s) 536, 587, 761, 1118, 1546, 1763
DpnI GATC 5 cut(s) 58, 546, 1055, 1594, 1608
DpnII GATC 5 cut(s) 56, 544, 1053, 1592, 1606
DriI GACNNNNNGTC 1 cut(s) 787
EaeI YGGCCR 1 cut(s) 1168
Eam1104I CTCTTC 1 cut(s) 728
Eam1105I GACNNNNNGTC 1 cut(s) 787
EarI CTCTTC 1 cut(s) 728
EciI GGCGGA 2 cut(s) 410, 516
Ecl136II GAGCTC 2 cut(s) 1475, 1732
Eco130I CCWWGG 1 cut(s) 1171
Eco24I GRGCYC 2 cut(s) 1477, 1734
Eco32I GATATC 1 cut(s) 1525
Eco47I GGWCC 3 cut(s) 215, 715, 1657
Eco53kI GAGCTC 2 cut(s) 1475, 1732
Eco57I CTGAAG 2 cut(s) 323, 1368
Eco81I CCTNAGG 1 cut(s) 1118
Eco88I CYCGRG 1 cut(s) 926
EcoICRI GAGCTC 2 cut(s) 1475, 1732
EcoRI GAATTC 2 cut(s) 478, 1161
EcoRII CCWGG 1 cut(s) 160
EcoRV GATATC 1 cut(s) 1525
EcoT14I CCWWGG 1 cut(s) 1171
EcoT38I GRGCYC 2 cut(s) 1477, 1734
ErhI CCWWGG 1 cut(s) 1171
FaeI CATG 6 cut(s) 626, 897, 1204, 1437, 1640, 1815
FalI AAGNNNNNCTT 4 cut(s) 272, 304, 641, 673
FaqI GGGAC 1 cut(s) 419
FatI CATG 6 cut(s) 622, 893, 1200, 1433, 1636, 1811
FauNDI CATATG 1 cut(s) 122
FbaI TGATCA 2 cut(s) 1053, 1606
FblI GTMKAC 4 cut(s) 834, 1136, 1191, 1532
Fnu4HI GCNGC 4 cut(s) 141, 723, 898, 1497
FokI GGATG 4 cut(s) 179, 516, 1223, 1786
FriOI GRGCYC 2 cut(s) 1477, 1734
Fsp4HI GCNGC 4 cut(s) 141, 723, 898, 1497
FspBI CTAG 2 cut(s) 42, 786
GlaI GCGC 1 cut(s) 1445
GluI GCNGC 4 cut(s) 141, 723, 898, 1497
HaeIII GGCC 3 cut(s) 1068, 1099, 1170
HapII CCGG 2 cut(s) 830, 1100
HhaI GCGC 1 cut(s) 1446
Hin1II CATG 6 cut(s) 626, 897, 1204, 1437, 1640, 1815
Hin6I GCGC 1 cut(s) 1444
HinP1I GCGC 1 cut(s) 1444
HincII GTYRAC 1 cut(s) 835
HindII GTYRAC 1 cut(s) 835
HindIII AAGCTT 2 cut(s) 650, 824
HinfI GANTC 6 cut(s) 266, 429, 461, 509, 619, 1269
HpaII CCGG 2 cut(s) 830, 1100
HphI GGTGA 3 cut(s) 595, 691, 962
Hpy166II GTNNAC 7 cut(s) 346, 682, 835, 1003, 1137, 1192, 1533
Hpy188I TCNGA 3 cut(s) 61, 567, 715
Hpy8I GTNNAC 7 cut(s) 346, 682, 835, 1003, 1137, 1192, 1533
Hpy99I CGWCG 1 cut(s) 1037
HpyAV CCTTC 4 cut(s) 667, 905, 1091, 1771
HpyCH4III ACNGT 2 cut(s) 560, 1189
HpyCH4IV ACGT 1 cut(s) 1795
HpyF10VI GCNNNNNNNGC 2 cut(s) 137, 1571
HpyF3I CTNAG 6 cut(s) 536, 587, 761, 1118, 1546, 1763
HpySE526I ACGT 1 cut(s) 1795
Hsp92II CATG 6 cut(s) 626, 897, 1204, 1437, 1640, 1815
HspAI GCGC 1 cut(s) 1444
Ksp22I TGATCA 2 cut(s) 1053, 1606
Kzo9I GATC 5 cut(s) 56, 544, 1053, 1592, 1606
LmnI GCTCC 3 cut(s) 1109, 1472, 1504
Lsp1109I GCAGC 3 cut(s) 127, 734, 1508
LweI GCATC 3 cut(s) 494, 955, 968
MaeI CTAG 2 cut(s) 42, 786
MaeII ACGT 1 cut(s) 1795
MaeIII GTNAC 4 cut(s) 230, 355, 539, 1649
MalI GATC 5 cut(s) 58, 546, 1055, 1594, 1608
MboI GATC 5 cut(s) 56, 544, 1053, 1592, 1606
MboII GAAGA 9 cut(s) 30, 44, 74, 355, 409, 412, 745, 1243, 1430
MfeI CAATTG 2 cut(s) 1092, 1596
MhlI GDGCHC 2 cut(s) 1477, 1734
MlsI TGGCCA 1 cut(s) 1170
MluNI TGGCCA 1 cut(s) 1170
MlyI GAGTC 3 cut(s) 423, 518, 628
MmeI TCCRAC 1 cut(s) 1185
Mox20I TGGCCA 1 cut(s) 1170
MroXI GAANNNNTTC 4 cut(s) 284, 1390, 1422, 1668
MscI TGGCCA 1 cut(s) 1170
MslI CAYNNNNRTG 4 cut(s) 449, 763, 1311, 1432
Msp20I TGGCCA 1 cut(s) 1170
MspCI CTTAAG 1 cut(s) 1447
MspI CCGG 2 cut(s) 830, 1100
MspR9I CCNGG 1 cut(s) 162
MunI CAATTG 2 cut(s) 1092, 1596
Mva1269I GAATGC 1 cut(s) 962
MvaI CCWGG 1 cut(s) 162
MvnI CGCG 1 cut(s) 900
MwoI GCNNNNNNNGC 2 cut(s) 137, 1571
NdeI CATATG 1 cut(s) 122
NdeII GATC 5 cut(s) 56, 544, 1053, 1592, 1606
NlaIII CATG 6 cut(s) 626, 897, 1204, 1437, 1640, 1815
NlaIV GGNNCC 5 cut(s) 688, 750, 1111, 1387, 1659
NspI RCATGY 1 cut(s) 1204
NspV TTCGAA 1 cut(s) 909
OliI CACNNNNGTG 1 cut(s) 449
PagI TCATGA 1 cut(s) 622
PcsI WCGNNNNNNNCGW 2 cut(s) 261, 270
PctI GAATGC 1 cut(s) 962
PdmI GAANNNNTTC 4 cut(s) 284, 1390, 1422, 1668
PfeI GAWTC 3 cut(s) 266, 461, 1269
PkrI GCNGC 4 cut(s) 142, 724, 899, 1498
PleI GAGTC 3 cut(s) 423, 517, 627
PpsI GAGTC 3 cut(s) 423, 517, 627
Ppu21I YACGTR 1 cut(s) 1796
PshBI ATTAAT 3 cut(s) 68, 597, 951
Psp124BI GAGCTC 2 cut(s) 1477, 1734
Psp6I CCWGG 1 cut(s) 160
PspGI CCWGG 1 cut(s) 160
PspN4I GGNNCC 5 cut(s) 688, 750, 1111, 1387, 1659
PspPI GGNCC 4 cut(s) 215, 715, 1097, 1657
PstI CTGCAG 1 cut(s) 451
RsaI GTAC 9 cut(s) 48, 136, 200, 298, 347, 1019, 1186, 1559, 1635
RsaNI GTAC 9 cut(s) 47, 135, 199, 297, 346, 1018, 1185, 1558, 1634
RseI CAYNNNNRTG 4 cut(s) 449, 763, 1311, 1432
SacI GAGCTC 2 cut(s) 1477, 1734
SalI GTCGAC 1 cut(s) 833
SatI GCNGC 4 cut(s) 141, 723, 898, 1497
Sau3AI GATC 5 cut(s) 56, 544, 1053, 1592, 1606
Sau96I GGNCC 4 cut(s) 215, 715, 1097, 1657
ScaI AGTACT 1 cut(s) 136
SchI GAGTC 3 cut(s) 423, 518, 628
ScrFI CCNGG 1 cut(s) 162
SduI GDGCHC 2 cut(s) 1477, 1734
SfaNI GCATC 3 cut(s) 494, 955, 968
SfcI CTRYAG 2 cut(s) 447, 636
SfuI TTCGAA 1 cut(s) 909
SinI GGWCC 3 cut(s) 215, 715, 1657
SmiMI CAYNNNNRTG 4 cut(s) 449, 763, 1311, 1432
SmlI CTYRAG 3 cut(s) 289, 1447, 1847
SmoI CTYRAG 3 cut(s) 289, 1447, 1847
SsiI CCGC 6 cut(s) 6, 395, 501, 878, 898, 973
SspMI CTAG 2 cut(s) 42, 786
SstI GAGCTC 2 cut(s) 1477, 1734
StyD4I CCNGG 1 cut(s) 160
StyI CCWWGG 1 cut(s) 1171
TaaI ACNGT 2 cut(s) 560, 1189
TaiI ACGT 1 cut(s) 1798
TaqI TCGA 8 cut(s) 55, 255, 323, 427, 834, 909, 1589, 1769
TaqII GACCGA 1 cut(s) 1662
TatI WGTACW 5 cut(s) 46, 134, 345, 1557, 1633
TauI GCSGC 1 cut(s) 900
TfiI GAWTC 3 cut(s) 266, 461, 1269
TscAI CASTG 4 cut(s) 451, 456, 519, 595
TseI GCWGC 3 cut(s) 140, 722, 1496
TspGWI ACGGA 3 cut(s) 699, 909, 1703
TspRI CASTG 4 cut(s) 451, 456, 519, 595
Vha464I CTTAAG 1 cut(s) 1447
VpaK11BI GGWCC 3 cut(s) 215, 715, 1657
VspI ATTAAT 3 cut(s) 68, 597, 951
XapI RAATTY 4 cut(s) 478, 815, 1161, 1370
XbaI TCTAGA 1 cut(s) 41
XceI RCATGY 1 cut(s) 1204
XcmI CCANNNNNNNNNTGG 1 cut(s) 176
XmiI GTMKAC 4 cut(s) 834, 1136, 1191, 1532
XmnI GAANNNNTTC 4 cut(s) 284, 1390, 1422, 1668
XspI CTAG 2 cut(s) 42, 786
ZrmI AGTACT 1 cut(s) 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.