MD17G1131900.v1.1

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
11649606 .. 11650318
713 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1131900.v1.1.491

Sequence Viewer

Length: 567 bp
ATGAAAAGGAAAGACACCAACCGCAAGCAGAAGTTTTCTAAACGAAATGGCGTTTTCTTGTTGGGGCAGCAATTATCTTCCGCTGAAGCTAACGTTGATAAAAATAAATTGTTCAGTAAGGAGGAGCTAGAAAACACCAGGGACCATTTCAGCGTAGAGAGAATTCTTGGTCAGGGAGGCCAGGGTACCGTATACAAAGGAATGTTAGCAAATGGGAGAACTGTTGCTGTAAATAAGTCGAAAAGTGTAGTTATTGGAGACGAACACCCGAACGAGGAGTTTCCTCTTACATGGGAAATGCGGTTACAAGTTGCAACCGAAGTTGCAGGAGCACTATCATACTTACACTCGGCAGTTTCCTGTCCTATTTACCACCGAGACATCAAGTCTTCGAACATACTGTTGGATGATAAATACAGAGCCAAAGTGGCAGACTTTGGGACATCAACATCTGTCGCCATTGACAAAACACACCTTACCATGACACAGGTAAATGGAACATTCGGTTATTTGGACCCGGAGTACTTTCAGACTAGCCAATTTACGGACAAGAGTGACGTTTGTTGA

Protein Analysis

189

Amino Acids

21.06

Weight (kDa)

8.45

Isoelectric Point (pI)

21.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 95 - 187 6e-15 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 103 - 187 2.1e-17 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 185
AccB1I GGYRCC 1 cut(s) 185
AccI GTMKAC 1 cut(s) 192
AciI CCGC 3 cut(s) 22, 81, 301
AclI AACGTT 1 cut(s) 93
AcsI RAATTY 1 cut(s) 162
AcuI CTGAAG 1 cut(s) 105
AfaI GTAC 2 cut(s) 187, 524
AfiI CCNNNNNNNGG 2 cut(s) 274, 544
AhdI GACNNNNNGTC 1 cut(s) 385
AjnI CCWGG 2 cut(s) 137, 180
AjuI GAANNNNNNNTTGG 2 cut(s) 386, 418
AluBI AGCT 2 cut(s) 89, 127
AluI AGCT 2 cut(s) 89, 127
Alw21I GWGCWC 1 cut(s) 334
Alw26I GTCTC 2 cut(s) 252, 372
AoxI GGCC 1 cut(s) 178
ApeKI GCWGC 1 cut(s) 67
ApoI RAATTY 1 cut(s) 162
Asp718I GGTACC 1 cut(s) 185
AspS9I GGNCC 2 cut(s) 142, 514
AsuC2I CCSGG 1 cut(s) 518
AsuII TTCGAA 1 cut(s) 392
AvaII GGWCC 2 cut(s) 142, 514
BanI GGYRCC 1 cut(s) 185
BbsI GAAGAC 1 cut(s) 381
Bbv12I GWGCWC 1 cut(s) 334
BbvI GCAGC 1 cut(s) 79
BciT130I CCWGG 2 cut(s) 139, 182
BcnI CCSGG 1 cut(s) 518
BcoDI GTCTC 2 cut(s) 252, 372
BfaI CTAG 2 cut(s) 128, 534
BglI GCCNNNNNGGC 1 cut(s) 428
BisI GCNGC 1 cut(s) 68
BlsI GCNGC 1 cut(s) 69
BmcAI AGTACT 1 cut(s) 524
Bme1390I CCNGG 3 cut(s) 139, 182, 518
Bme18I GGWCC 2 cut(s) 142, 514
BmeRI GACNNNNNGTC 1 cut(s) 385
BmgT120I GGNCC 2 cut(s) 142, 514
BmiI GGNNCC 3 cut(s) 143, 187, 516
BmrFI CCNGG 3 cut(s) 139, 182, 518
BpiI GAAGAC 1 cut(s) 381
Bpu14I TTCGAA 1 cut(s) 392
BpuMI CCSGG 1 cut(s) 518
BsaJI CCNNGG 2 cut(s) 138, 181
Bsc4I CCNNNNNNNGG 2 cut(s) 274, 544
BseBI CCWGG 2 cut(s) 139, 182
BseDI CCNNGG 2 cut(s) 138, 181
BseGI GGATG 1 cut(s) 412
BseLI CCNNNNNNNGG 2 cut(s) 274, 544
BseRI GAGGAG 2 cut(s) 137, 290
BseXI GCAGC 1 cut(s) 79
BshFI GGCC 1 cut(s) 180
BshNI GGYRCC 1 cut(s) 185
BsiHKAI GWGCWC 1 cut(s) 334
BsiSI CCGG 1 cut(s) 518
BslFI GGGAC 2 cut(s) 155, 454
BslI CCNNNNNNNGG 2 cut(s) 274, 544
BsmAI GTCTC 2 cut(s) 252, 372
BsmBI CGTCTC 1 cut(s) 252
BsmFI GGGAC 2 cut(s) 155, 454
BsnI GGCC 1 cut(s) 180
Bsp119I TTCGAA 1 cut(s) 392
Bsp1286I GDGCHC 1 cut(s) 334
BspACI CCGC 3 cut(s) 22, 81, 301
BspANI GGCC 1 cut(s) 180
BspLI GGNNCC 3 cut(s) 143, 187, 516
BspT104I TTCGAA 1 cut(s) 392
BspT107I GGYRCC 1 cut(s) 185
BssECI CCNNGG 2 cut(s) 138, 181
BssNAI GTATAC 1 cut(s) 193
Bst1107I GTATAC 1 cut(s) 193
Bst2UI CCWGG 2 cut(s) 139, 182
Bst4CI ACNGT 3 cut(s) 190, 223, 402
BstBI TTCGAA 1 cut(s) 392
BstC8I GCNNGC 1 cut(s) 26
BstF5I GGATG 1 cut(s) 412
BstMAI GTCTC 2 cut(s) 252, 372
BstMWI GCNNNNNNNGC 1 cut(s) 428
BstNI CCWGG 2 cut(s) 139, 182
BstSCI CCNGG 3 cut(s) 137, 180, 516
BstV1I GCAGC 1 cut(s) 79
BstV2I GAAGAC 1 cut(s) 381
BstZ17I GTATAC 1 cut(s) 193
BsuRI GGCC 1 cut(s) 180
BtsCI GGATG 1 cut(s) 412
Cac8I GCNNGC 1 cut(s) 26
Cfr13I GGNCC 2 cut(s) 142, 514
Csp6I GTAC 2 cut(s) 186, 523
CviAII CATG 2 cut(s) 291, 481
CviJI RGCY 5 cut(s) 89, 127, 180, 422, 537
CviKI_1 RGCY 5 cut(s) 89, 127, 180, 422, 537
CviQI GTAC 2 cut(s) 186, 523
DriI GACNNNNNGTC 1 cut(s) 385
Eam1105I GACNNNNNGTC 1 cut(s) 385
Eco47I GGWCC 2 cut(s) 142, 514
Eco57I CTGAAG 1 cut(s) 105
EcoRI GAATTC 1 cut(s) 162
EcoRII CCWGG 2 cut(s) 137, 180
Esp3I CGTCTC 1 cut(s) 252
FaeI CATG 2 cut(s) 294, 484
FaiI YATR 5 cut(s) 193, 292, 340, 398, 482
FaqI GGGAC 2 cut(s) 155, 454
FatI CATG 2 cut(s) 290, 480
FblI GTMKAC 1 cut(s) 192
Fnu4HI GCNGC 1 cut(s) 68
FokI GGATG 1 cut(s) 419
Fsp4HI GCNGC 1 cut(s) 68
FspBI CTAG 2 cut(s) 128, 534
GluI GCNGC 1 cut(s) 68
HaeIII GGCC 1 cut(s) 180
HapII CCGG 1 cut(s) 518
Hin1II CATG 2 cut(s) 294, 484
HpaII CCGG 1 cut(s) 518
Hpy166II GTNNAC 1 cut(s) 193
Hpy188I TCNGA 1 cut(s) 531
Hpy8I GTNNAC 1 cut(s) 193
HpyCH4III ACNGT 3 cut(s) 190, 223, 402
HpyCH4IV ACGT 2 cut(s) 93, 558
HpyCH4V TGCA 2 cut(s) 314, 326
HpyF10VI GCNNNNNNNGC 1 cut(s) 428
HpySE526I ACGT 2 cut(s) 93, 558
Hsp92II CATG 2 cut(s) 294, 484
KpnI GGTACC 1 cut(s) 189
LmnI GCTCC 2 cut(s) 124, 329
LpnPI CCDG 9 cut(s) 124, 151, 158, 167, 194, 312, 373, 473, 531
Lsp1109I GCAGC 1 cut(s) 79
MaeI CTAG 2 cut(s) 128, 534
MaeII ACGT 2 cut(s) 93, 558
MaeIII GTNAC 2 cut(s) 303, 554
MboII GAAGA 2 cut(s) 69, 381
MhlI GDGCHC 1 cut(s) 334
MluCI AATT 4 cut(s) 71, 107, 162, 539
MmeI TCCRAC 1 cut(s) 384
MnlI CCTC 4 cut(s) 115, 170, 268, 294
MspA1I CMGCKG 1 cut(s) 83
MspI CCGG 1 cut(s) 518
MspR9I CCNGG 3 cut(s) 139, 182, 518
MvaI CCWGG 2 cut(s) 139, 182
MwoI GCNNNNNNNGC 1 cut(s) 428
NciI CCSGG 1 cut(s) 518
NlaIII CATG 2 cut(s) 294, 484
NlaIV GGNNCC 3 cut(s) 143, 187, 516
NmeAIII GCCGAG 1 cut(s) 329
NmuCI GTSAC 1 cut(s) 554
NspV TTCGAA 1 cut(s) 392
PkrI GCNGC 1 cut(s) 69
Psp1406I AACGTT 1 cut(s) 93
Psp6I CCWGG 2 cut(s) 137, 180
PspGI CCWGG 2 cut(s) 137, 180
PspN4I GGNNCC 3 cut(s) 143, 187, 516
PspPI GGNCC 2 cut(s) 142, 514
RsaI GTAC 2 cut(s) 187, 524
RsaNI GTAC 2 cut(s) 186, 523
SatI GCNGC 1 cut(s) 68
Sau96I GGNCC 2 cut(s) 142, 514
ScaI AGTACT 1 cut(s) 524
ScrFI CCNGG 3 cut(s) 139, 182, 518
SduI GDGCHC 1 cut(s) 334
SetI ASST 6 cut(s) 91, 96, 129, 477, 492, 561
SfuI TTCGAA 1 cut(s) 392
SinI GGWCC 2 cut(s) 142, 514
Sse9I AATT 4 cut(s) 71, 107, 162, 539
SsiI CCGC 3 cut(s) 22, 81, 301
SspMI CTAG 2 cut(s) 128, 534
StyD4I CCNGG 3 cut(s) 137, 180, 516
TaaI ACNGT 3 cut(s) 190, 223, 402
TaiI ACGT 2 cut(s) 96, 561
TaqI TCGA 2 cut(s) 239, 392
TasI AATT 4 cut(s) 71, 107, 162, 539
TatI WGTACW 1 cut(s) 522
TseFI GTSAC 1 cut(s) 554
TseI GCWGC 1 cut(s) 67
Tsp45I GTSAC 1 cut(s) 554
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 560
VpaK11BI GGWCC 2 cut(s) 142, 514
XapI RAATTY 1 cut(s) 162
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 2 cut(s) 128, 534
ZrmI AGTACT 1 cut(s) 524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.