RLG00000019011

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
44695900 .. 44698745
2846 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019011

Sequence Viewer

Length: 2082 bp
ATGTCTAGATCCCAGTTCCAGTTTCTTGTGCTGCACTTTACTAGTCTGTTCATCTTGTGGGCTATGAGCAGCAGGGCAACACCAGCTGCAGCCTCACCGGTGCCCCCCACAGACTCGATAGCAAAGCTTCACTGCCAGTCCCATTGTGGAGACATTGCAATCCCATACCCTTTTGGAATTGGGGAAGGCTGCTACCTTACTGGCAGCGACACAGGTTTCTACAGCAACTCGTTCCAGATAATATGTAACTACTCAACCAGCCCTCCCAAACCTTTCTTGACCAGCACGAGTCTTGAAGTGCTGGAAATCTCTATTGAAGGCACACTCCTGGTCAGAAGCCCCATAACCTTCTCAAATTGCACTGCCAAGCCGGGGCTGCCGAGCAACCGCCAGACCTACAACCTGGAGCAAACCCCTTTCTGGTACTCCCAGGACAACAGATTCACTTCAATGAGTTGTGGAGGAATTGCCCTAATGACAAAATTTTCTAATGGGTCGACAACAACACTTGGTGGCTGCTTGTCCATTTGTGACTACTCCAGTAACCCTGTATTAAAGAAGAATACCTGCATTGGTATCAACTGCTGCCAATCCACCTTTCCTAAATATCTAAAGAACTTCAATGCTAGCTTTGCAGACGTAATAAACGCTCGCAGTGCTGAGGAATGCAAGTATGCATTCGTTGTAAAGCAAAGTTGGTTTACTAGAACAAATATGTCGGTCATTGGTGATATGGACTACGTCCCTGTGGAGCTGAAATGGAGCGCACGCTCATATTCCGATATCTCGAACAATTGGACTGTCTCTAACAATAGCACATATATCAGCGATGGTGGACGTCTACTCTTATGCTCAGAAGGCTATGAAGGAAACCCTTATCTTCTTCATGGATGTCAAGATATCAATGAATGTGAGGGTCGACGATGTGGTAGTCACGAGATCTGTATCAATTATCCTGGAGGCTTTAAGTGTGATCCTCCACCGACAAGCTTAAGGCCAGAAAAGCTGGTTGTTATAGGTGAAGTCAATGTTGAGAAAATTAAGCTGTTTAGTTCCAAGGAGCTAGAGAAAGCCACAGACCATTTTAATGTAGACAGAATTCTTGGTCAAGGAGGCCAAGGTACTGTTTACAAAGGAATGTTGGCAGATGGAAGAATTGTTGCTGTGAAGAAGTCTAAACTCGTTCATGATGGGGAAATTAGACAATTCATCAATGAAATTGTCATTCTTTCCCAAATTATCCACAGAAATGTCGTCAAACTTTTGGGTTGTTGCTTAGATACAGAAGTTCCCCTTTTGGTTTATGAATTCATTGCCAATGGAACACTTTCTGAATATATTCATCAGCAGAATGAAGAGTTTCCTCTTACATGGGAAATTAGACTACGAGTTGCCGTCGAAGTAGCAGGAGCTCTTTCTTACTTACATTCTGCAGCTGATTTTCCCATTTACCATCGAGATATCAAGTCATCTAACATACTCCTAGATGAGAAATACAGAGCAAAAGTAGCAGACTTTGGGACTTCTCGATCTGTTTCGATTGACCAAACACACCTTACCACACTAGTACATGGAACATTTGGTTATTTGGACCCAGAGTACTTCCAATCTAGCCAATTTACTGACAAGAGTGATGTTTATAGCTTTGGTGTGGTACTTGCTGAGCTCTTAACTGGACAAAAACCAGTTTCTTTCACAAGATCCCAAGAAGAAAGAAGCCTAGCAACTTATTTCCTTCTTTCTATGGATCAAGATTGTCTGTTTGATGTTCTAGATTCTCAAGTTACGAGATATGGGGGGAAAGAAGAGATTACTGCAGTTGCTAACCTTGCAAAAAGATGCTTAAATTTGAATGGAAAGAGACGACCTACTATGAAAGAAGTAGCAGTTGAGTTGGAGGCAATTCAATCGTCAATTAAGGCCTCTAATCATGTTGATCAAAATTTGGAAGAGGTTGCATATAACCAAACTCATGAAATAACCGAGGCTTGGGATATAGTTTCTACATCAACAGGGCCTTGTATCGATGGTGGTAGGTCTTCATTCGATACACAACCACTGTTGACTTTGAAGACTCTGTGA

Protein Analysis

694

Amino Acids

76.96

Weight (kDa)

5.68

Isoelectric Point (pI)

43.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 45 - 107 7.7e-09 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 362 - 628 1.6e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 364 - 631 4.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 841
Acc36I ACCTGC 1 cut(s) 575
AccB1I GGYRCC 1 cut(s) 100
AccI GTMKAC 4 cut(s) 497, 841, 919, 1092
AciI CCGC 1 cut(s) 388
AclWI GGATC 4 cut(s) 3, 968, 1695, 1755
AcsI RAATTY 5 cut(s) 482, 1098, 1307, 1846, 1942
AcyI GRCGYC 1 cut(s) 838
AdeI CACNNNGTG 1 cut(s) 512
AfaI GTAC 5 cut(s) 425, 1123, 1569, 1601, 1656
AfiI CCNNNNNNNGG 3 cut(s) 372, 420, 1989
AflII CTTAAG 1 cut(s) 991
AgeI ACCGGT 1 cut(s) 97
AgsI TTSAA 7 cut(s) 296, 317, 450, 622, 1852, 1907, 2071
AhlI ACTAGT 2 cut(s) 41, 1564
AjnI CCWGG 4 cut(s) 327, 402, 429, 955
AjuI GAANNNNNNNTTGG 2 cut(s) 582, 614
Alw21I GWGCWC 2 cut(s) 1414, 1668
Alw26I GTCTC 3 cut(s) 144, 808, 1855
AlwI GGATC 4 cut(s) 3, 968, 1695, 1755
AoxI GGCC 4 cut(s) 995, 1114, 1920, 2015
ApoI RAATTY 5 cut(s) 482, 1098, 1307, 1846, 1942
AsiGI ACCGGT 1 cut(s) 97
Asp700I GAANNNNTTC 3 cut(s) 1327, 1338, 1359
AspLEI GCGC 1 cut(s) 767
AspS9I GGNCC 2 cut(s) 1591, 2015
AsuC2I CCSGG 1 cut(s) 372
AsuHPI GGTGA 3 cut(s) 87, 740, 1031
AsuNHI GCTAGC 1 cut(s) 626
AvaII GGWCC 1 cut(s) 1591
BaeGI GKGCMC 1 cut(s) 105
BaeI ACNNNNGTAYC 2 cut(s) 1272, 1305
BanI GGYRCC 1 cut(s) 100
BanII GRGCYC 2 cut(s) 1414, 1668
BauI CACGAG 2 cut(s) 286, 935
BbsI GAAGAC 2 cut(s) 2031, 2078
Bbv12I GWGCWC 2 cut(s) 1414, 1668
BbvCI CCTCAGC 1 cut(s) 660
BccI CCATC 5 cut(s) 824, 1142, 1184, 1461, 2021
BceAI ACGGC 1 cut(s) 1379
BcgI CGANNNNNNTGC 2 cut(s) 1890, 1924
BciT130I CCWGG 4 cut(s) 329, 404, 431, 957
BclI TGATCA 1 cut(s) 1936
BcnI CCSGG 1 cut(s) 372
BcoDI GTCTC 3 cut(s) 144, 808, 1855
BcuI ACTAGT 2 cut(s) 41, 1564
BfmI CTRYAG 4 cut(s) 87, 220, 1431, 1815
BfrI CTTAAG 1 cut(s) 991
BfuAI ACCTGC 1 cut(s) 575
BglII AGATCT 1 cut(s) 939
BlpI GCTNAGC 1 cut(s) 1662
BmcAI AGTACT 1 cut(s) 1601
Bme1390I CCNGG 5 cut(s) 329, 372, 404, 431, 957
Bme18I GGWCC 1 cut(s) 1591
BmgT120I GGNCC 2 cut(s) 1591, 2015
BmiI GGNNCC 2 cut(s) 102, 1593
BmrFI CCNGG 5 cut(s) 329, 372, 404, 431, 957
BmrI ACTGGG 1 cut(s) 7
BmsI GCATC 1 cut(s) 1829
BmtI GCTAGC 1 cut(s) 630
BmuI ACTGGG 1 cut(s) 7
BpiI GAAGAC 2 cut(s) 2031, 2078
BpmI CTGGAG 3 cut(s) 425, 523, 978
Bpu10I CCTNAGC 1 cut(s) 660
Bpu1102I GCTNAGC 1 cut(s) 1662
BpuEI CTTGAG 1 cut(s) 1764
BpuMI CCSGG 1 cut(s) 372
Bsa29I ATCGAT 1 cut(s) 2025
BsaBI GATNNNNATC 1 cut(s) 944
BsaHI GRCGYC 1 cut(s) 838
BsaJI CCNNGG 5 cut(s) 371, 429, 1056, 1117, 1983
BsaWI WCCGGW 1 cut(s) 97
BsaXI ACNNNNNCTCC 2 cut(s) 247, 277
Bsc4I CCNNNNNNNGG 3 cut(s) 372, 420, 1989
Bse118I RCCGGY 1 cut(s) 97
Bse1I ACTGG 7 cut(s) 13, 19, 136, 205, 540, 1678, 1685
Bse3DI GCAATG 2 cut(s) 153, 1311
Bse8I GATNNNNATC 1 cut(s) 944
BseBI CCWGG 4 cut(s) 329, 404, 431, 957
BseCI ATCGAT 1 cut(s) 2025
BseDI CCNNGG 5 cut(s) 371, 429, 1056, 1117, 1983
BseGI GGATG 1 cut(s) 896
BseJI GATNNNNATC 1 cut(s) 944
BseLI CCNNNNNNNGG 3 cut(s) 372, 420, 1989
BseMI GCAATG 2 cut(s) 153, 1311
BseMII CTCAG 3 cut(s) 651, 867, 1653
BseNI ACTGG 7 cut(s) 13, 19, 136, 205, 540, 1678, 1685
BseSI GKGCMC 1 cut(s) 105
BsgI GTGCAG 1 cut(s) 17
BshFI GGCC 4 cut(s) 997, 1116, 1922, 2017
BshNI GGYRCC 1 cut(s) 100
BshTI ACCGGT 1 cut(s) 97
BshVI ATCGAT 1 cut(s) 2025
BsiHKAI GWGCWC 2 cut(s) 1414, 1668
BsiSI CCGG 2 cut(s) 98, 371
BslFI GGGAC 3 cut(s) 124, 728, 1534
BslI CCNNNNNNNGG 3 cut(s) 372, 420, 1989
BsmAI GTCTC 3 cut(s) 144, 808, 1855
BsmBI CGTCTC 1 cut(s) 1855
BsmFI GGGAC 3 cut(s) 124, 728, 1534
BsmI GAATGC 2 cut(s) 671, 677
BsnI GGCC 4 cut(s) 997, 1116, 1922, 2017
Bsp1286I GDGCHC 3 cut(s) 105, 1414, 1668
Bsp143I GATC 7 cut(s) 8, 939, 973, 1529, 1700, 1747, 1936
Bsp1720I GCTNAGC 1 cut(s) 1662
BspACI CCGC 1 cut(s) 388
BspANI GGCC 4 cut(s) 997, 1116, 1922, 2017
BspCNI CTCAG 3 cut(s) 652, 866, 1654
BspDI ATCGAT 1 cut(s) 2025
BspHI TCATGA 2 cut(s) 1186, 1972
BspLI GGNNCC 2 cut(s) 102, 1593
BspMAI CTGCAG 3 cut(s) 91, 1435, 1819
BspMI ACCTGC 1 cut(s) 575
BspOI GCTAGC 1 cut(s) 630
BspPI GGATC 4 cut(s) 3, 968, 1695, 1755
BspT107I GGYRCC 1 cut(s) 100
BspTI CTTAAG 1 cut(s) 991
BsrDI GCAATG 2 cut(s) 153, 1311
BsrFI RCCGGY 1 cut(s) 97
BsrI ACTGG 7 cut(s) 13, 19, 136, 205, 540, 1678, 1685
BssAI RCCGGY 1 cut(s) 97
BssECI CCNNGG 5 cut(s) 371, 429, 1056, 1117, 1983
BssMI GATC 7 cut(s) 8, 939, 973, 1529, 1700, 1747, 1936
BssNI GRCGYC 1 cut(s) 838
BssSI CACGAG 2 cut(s) 286, 935
BssT1I CCWWGG 2 cut(s) 1056, 1117
Bst2BI CACGAG 2 cut(s) 286, 935
Bst2UI CCWGG 4 cut(s) 329, 404, 431, 957
Bst4CI ACNGT 3 cut(s) 802, 1126, 2061
Bst6I CTCTTC 3 cut(s) 1350, 1800, 1944
BstACI GRCGYC 1 cut(s) 838
BstAFI CTTAAG 1 cut(s) 991
BstC8I GCNNGC 3 cut(s) 628, 652, 769
BstDEI CTNAG 4 cut(s) 660, 853, 1276, 1662
BstF5I GGATG 1 cut(s) 896
BstHHI GCGC 1 cut(s) 767
BstKTI GATC 7 cut(s) 11, 942, 976, 1532, 1703, 1750, 1939
BstMAI GTCTC 3 cut(s) 144, 808, 1855
BstMBI GATC 7 cut(s) 8, 939, 973, 1529, 1700, 1747, 1936
BstMWI GCNNNNNNNGC 8 cut(s) 83, 376, 632, 656, 858, 1003, 1508, 1829
BstNI CCWGG 4 cut(s) 329, 404, 431, 957
BstSCI CCNGG 5 cut(s) 327, 370, 402, 429, 955
BstSFI CTRYAG 4 cut(s) 87, 220, 1431, 1815
BstSLI GKGCMC 1 cut(s) 105
BstV2I GAAGAC 2 cut(s) 2031, 2078
BstX2I RGATCY 3 cut(s) 8, 939, 1700
BstYI RGATCY 3 cut(s) 8, 939, 1700
Bsu15I ATCGAT 1 cut(s) 2025
BsuRI GGCC 4 cut(s) 997, 1116, 1922, 2017
BsuTUI ATCGAT 1 cut(s) 2025
BtgZI GCGATG 1 cut(s) 843
BtsCI GGATG 1 cut(s) 896
BtsI GCAGTG 3 cut(s) 130, 360, 661
BtsIMutI CAGTG 4 cut(s) 130, 360, 661, 2057
BveI ACCTGC 1 cut(s) 575
Cac8I GCNNGC 3 cut(s) 628, 652, 769
CciI TCATGA 2 cut(s) 1186, 1972
CfoI GCGC 1 cut(s) 767
Cfr10I RCCGGY 1 cut(s) 97
Cfr13I GGNCC 2 cut(s) 1591, 2015
ClaI ATCGAT 1 cut(s) 2025
Csp6I GTAC 5 cut(s) 424, 1122, 1568, 1600, 1655
CspAI ACCGGT 1 cut(s) 97
CviAII CATG 6 cut(s) 887, 1187, 1371, 1571, 1931, 1973
CviQI GTAC 5 cut(s) 424, 1122, 1568, 1600, 1655
DdeI CTNAG 4 cut(s) 660, 853, 1276, 1662
DpnI GATC 7 cut(s) 10, 941, 975, 1531, 1702, 1749, 1938
DpnII GATC 7 cut(s) 8, 939, 973, 1529, 1700, 1747, 1936
DraIII CACNNNGTG 1 cut(s) 512
Eam1104I CTCTTC 3 cut(s) 1350, 1800, 1944
EarI CTCTTC 3 cut(s) 1350, 1800, 1944
Ecl136II GAGCTC 2 cut(s) 1412, 1666
Eco130I CCWWGG 2 cut(s) 1056, 1117
Eco147I AGGCCT 1 cut(s) 1922
Eco24I GRGCYC 2 cut(s) 1414, 1668
Eco32I GATATC 3 cut(s) 784, 901, 1462
Eco47I GGWCC 1 cut(s) 1591
Eco53kI GAGCTC 2 cut(s) 1412, 1666
EcoICRI GAGCTC 2 cut(s) 1412, 1666
EcoO109I RGGNCCY 1 cut(s) 2015
EcoRI GAATTC 2 cut(s) 1098, 1307
EcoRII CCWGG 4 cut(s) 327, 402, 429, 955
EcoRV GATATC 3 cut(s) 784, 901, 1462
EcoT14I CCWWGG 2 cut(s) 1056, 1117
EcoT22I ATGCAT 1 cut(s) 679
EcoT38I GRGCYC 2 cut(s) 1414, 1668
ErhI CCWWGG 2 cut(s) 1056, 1117
Esp3I CGTCTC 1 cut(s) 1855
FaeI CATG 6 cut(s) 890, 1190, 1374, 1574, 1934, 1976
FalI AAGNNNNNCTT 2 cut(s) 1278, 1310
FaqI GGGAC 3 cut(s) 124, 728, 1534
FatI CATG 6 cut(s) 886, 1186, 1370, 1570, 1930, 1972
FbaI TGATCA 1 cut(s) 1936
FblI GTMKAC 4 cut(s) 497, 841, 919, 1092
FokI GGATG 1 cut(s) 903
FriOI GRGCYC 2 cut(s) 1414, 1668
GlaI GCGC 1 cut(s) 766
GsuI CTGGAG 3 cut(s) 425, 523, 978
HaeIII GGCC 4 cut(s) 997, 1116, 1922, 2017
HapII CCGG 2 cut(s) 98, 371
HhaI GCGC 1 cut(s) 767
Hin1I GRCGYC 1 cut(s) 838
Hin1II CATG 6 cut(s) 890, 1190, 1374, 1574, 1934, 1976
Hin6I GCGC 1 cut(s) 765
HinP1I GCGC 1 cut(s) 765
HincII GTYRAC 3 cut(s) 498, 920, 2064
HindII GTYRAC 3 cut(s) 498, 920, 2064
HindIII AAGCTT 2 cut(s) 125, 988
HinfI GANTC 5 cut(s) 113, 289, 441, 1775, 2074
HpaII CCGG 2 cut(s) 98, 371
HphI GGTGA 3 cut(s) 87, 740, 1031
Hpy166II GTNNAC 8 cut(s) 498, 702, 836, 842, 920, 1093, 1129, 2064
Hpy188I TCNGA 4 cut(s) 335, 781, 856, 1333
Hpy8I GTNNAC 8 cut(s) 498, 702, 836, 842, 920, 1093, 1129, 2064
Hpy99I CGWCG 2 cut(s) 924, 1400
HpyAV CCTTC 6 cut(s) 179, 311, 358, 851, 860, 1745
HpyCH4III ACNGT 3 cut(s) 802, 1126, 2061
HpyCH4IV ACGT 3 cut(s) 639, 741, 838
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 376, 632, 656, 858, 1003, 1508, 1829
HpyF3I CTNAG 4 cut(s) 660, 853, 1276, 1662
HpySE526I ACGT 3 cut(s) 639, 741, 838
Hsp92I GRCGYC 1 cut(s) 838
Hsp92II CATG 6 cut(s) 890, 1190, 1374, 1574, 1934, 1976
HspAI GCGC 1 cut(s) 765
Ksp22I TGATCA 1 cut(s) 1936
Kzo9I GATC 7 cut(s) 8, 939, 973, 1529, 1700, 1747, 1936
LmnI GCTCC 5 cut(s) 406, 751, 762, 1060, 1409
LweI GCATC 1 cut(s) 1829
MaeII ACGT 3 cut(s) 639, 741, 838
MaeIII GTNAC 5 cut(s) 245, 530, 542, 932, 1783
MalI GATC 7 cut(s) 10, 941, 975, 1531, 1702, 1749, 1938
MboI GATC 7 cut(s) 8, 939, 973, 1529, 1700, 1747, 1936
MfeI CAATTG 1 cut(s) 793
MflI RGATCY 3 cut(s) 8, 939, 1700
MhlI GDGCHC 3 cut(s) 105, 1414, 1668
MlyI GAGTC 3 cut(s) 107, 298, 2068
MmeI TCCRAC 1 cut(s) 1875
Mph1103I ATGCAT 1 cut(s) 679
MroXI GAANNNNTTC 3 cut(s) 1327, 1338, 1359
MseI TTAA 8 cut(s) 554, 966, 992, 1041, 1086, 1670, 1844, 1917
MslI CAYNNNNRTG 3 cut(s) 449, 1086, 1248
MspA1I CMGCKG 2 cut(s) 86, 1436
MspCI CTTAAG 1 cut(s) 991
MspI CCGG 2 cut(s) 98, 371
MspR9I CCNGG 5 cut(s) 329, 372, 404, 431, 957
MunI CAATTG 1 cut(s) 793
Mva1269I GAATGC 2 cut(s) 671, 677
MvaI CCWGG 4 cut(s) 329, 404, 431, 957
MwoI GCNNNNNNNGC 8 cut(s) 83, 376, 632, 656, 858, 1003, 1508, 1829
NciI CCSGG 1 cut(s) 372
NdeII GATC 7 cut(s) 8, 939, 973, 1529, 1700, 1747, 1936
NheI GCTAGC 1 cut(s) 626
NlaIII CATG 6 cut(s) 890, 1190, 1374, 1574, 1934, 1976
NlaIV GGNNCC 2 cut(s) 102, 1593
NmeAIII GCCGAG 1 cut(s) 405
NmuCI GTSAC 2 cut(s) 530, 932
NsiI ATGCAT 1 cut(s) 679
PagI TCATGA 2 cut(s) 1186, 1972
PceI AGGCCT 1 cut(s) 1922
PctI GAATGC 2 cut(s) 671, 677
PdmI GAANNNNTTC 3 cut(s) 1327, 1338, 1359
PfeI GAWTC 2 cut(s) 441, 1775
PflFI GACNNNGTC 1 cut(s) 740
PfoI TCCNGGA 1 cut(s) 955
PinAI ACCGGT 1 cut(s) 97
PleI GAGTC 3 cut(s) 107, 297, 2068
PpsI GAGTC 3 cut(s) 107, 297, 2068
Psp124BI GAGCTC 2 cut(s) 1414, 1668
Psp6I CCWGG 4 cut(s) 327, 402, 429, 955
PspGI CCWGG 4 cut(s) 327, 402, 429, 955
PspN4I GGNNCC 2 cut(s) 102, 1593
PspPI GGNCC 2 cut(s) 1591, 2015
PstI CTGCAG 3 cut(s) 91, 1435, 1819
PsuI RGATCY 3 cut(s) 8, 939, 1700
PsyI GACNNNGTC 1 cut(s) 740
PvuII CAGCTG 2 cut(s) 86, 1436
RsaI GTAC 5 cut(s) 425, 1123, 1569, 1601, 1656
RsaNI GTAC 5 cut(s) 424, 1122, 1568, 1600, 1655
RseI CAYNNNNRTG 3 cut(s) 449, 1086, 1248
SacI GAGCTC 2 cut(s) 1414, 1668
SalI GTCGAC 2 cut(s) 496, 918
SaqAI TTAA 8 cut(s) 554, 966, 992, 1041, 1086, 1670, 1844, 1917
Sau3AI GATC 7 cut(s) 8, 939, 973, 1529, 1700, 1747, 1936
Sau96I GGNCC 2 cut(s) 1591, 2015
ScaI AGTACT 1 cut(s) 1601
SchI GAGTC 3 cut(s) 107, 298, 2068
ScrFI CCNGG 5 cut(s) 329, 372, 404, 431, 957
SduI GDGCHC 3 cut(s) 105, 1414, 1668
SfaNI GCATC 1 cut(s) 1829
SfcI CTRYAG 4 cut(s) 87, 220, 1431, 1815
SgrAI CRCCGGYG 1 cut(s) 97
SinI GGWCC 1 cut(s) 1591
SmiMI CAYNNNNRTG 3 cut(s) 449, 1086, 1248
SmlI CTYRAG 2 cut(s) 991, 1779
SmoI CTYRAG 2 cut(s) 991, 1779
SpeI ACTAGT 2 cut(s) 41, 1564
SseBI AGGCCT 1 cut(s) 1922
SsiI CCGC 1 cut(s) 388
SstI GAGCTC 2 cut(s) 1414, 1668
StuI AGGCCT 1 cut(s) 1922
StyD4I CCNGG 5 cut(s) 327, 370, 402, 429, 955
StyI CCWWGG 2 cut(s) 1056, 1117
TaaI ACNGT 3 cut(s) 802, 1126, 2061
TaiI ACGT 3 cut(s) 642, 744, 841
TaqII GACCGA 1 cut(s) 709
TatI WGTACW 2 cut(s) 1567, 1599
TfiI GAWTC 2 cut(s) 441, 1775
Tru1I TTAA 8 cut(s) 554, 966, 992, 1041, 1086, 1670, 1844, 1917
Tru9I TTAA 8 cut(s) 554, 966, 992, 1041, 1086, 1670, 1844, 1917
TscAI CASTG 4 cut(s) 137, 367, 661, 2064
TseFI GTSAC 2 cut(s) 530, 932
Tsp45I GTSAC 2 cut(s) 530, 932
TspRI CASTG 4 cut(s) 137, 367, 661, 2064
Tth111I GACNNNGTC 1 cut(s) 740
Vha464I CTTAAG 1 cut(s) 991
VpaK11BI GGWCC 1 cut(s) 1591
XapI RAATTY 5 cut(s) 482, 1098, 1307, 1846, 1942
XbaI TCTAGA 2 cut(s) 5, 1771
XcmI CCANNNNNNNNNTGG 1 cut(s) 143
XmiI GTMKAC 4 cut(s) 497, 841, 919, 1092
XmnI GAANNNNTTC 3 cut(s) 1327, 1338, 1359
ZraI GACGTC 1 cut(s) 839
ZrmI AGTACT 1 cut(s) 1601
Zsp2I ATGCAT 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.