MD09G1145400.v1.1

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
11303663 .. 11305303
1641 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1145400.v1.1.491

Sequence Viewer

Length: 1044 bp
ATGGATTTTTTACAGTTTCTATTTCATATTACTCTATTATTTTTGTTTAAGAGTAGTGCAGTGCTAGCAGTACCATTATTAGCAAAGCCTAATTGCCAATCACGTTGCGGAGACGTTGAAATCCCGCACCCTTTCGGAATTGGAGCAGGCTGTTACATTGACGACTGGTTTCAAATAACATGTGTCAACTCAACCAAACCTTTCTTGAACAAGATCGATCTAGAGGTGCTGGAAATTTCTGTTAAAGGTACACTAAAGGTTGTAAACCCAATTACCTTCTCTTCCAACTGCAGTGCTAATAAGCCTATTCGCCAAGCGGCCAACTTGGAGGGAAGCCCTTTTGTGTTCTCCCAGAAGAACATATTCACTGCAATGGGTTGCGGCGTTATGGCCATGATCACTTCAAACTCAAATGGCTCTACCGTTTCAGCCGGTTGCAAGTCCGAATGTGACAATATTTCAACAAATGTGAAAAAGAATGGAGTTTACTTCTGCCAGACCCCCATCCCTTGGTTTCTCTCTGCCTTCAATACTACTTTCCAGGTTTATGATGATTATACAAAAAGTACTAATTCATGCAGTTATGCATTTTTGGTAGACCATGACTGGTTTCAGTGGTTTCCCAACAATTCAACAAAAAATATTTCTACCATCAGTGACATGGACAATGTCCCTGTCATGCTAGACTGGAACTTGTATCATTCGACGGTTGAGGTATTTGGAGTCATGGTAAAAGTAAATCCGATATCTTTGGGTTCCGAATCATCCTTCTATTGCCAAAGTCATAATGACAGCTCTTCAATACATGAATCCTCAATCAGGCTGGAATGTTTCTGCAATTGGGGCTATGAGGGAAATCCCTATCTCCCACAAGGATGTCAAGGTATCGGCATCGGTCTTGGGCTATTGTTTCTACTCGTTGGTGCTTGGTGGTTGTATAAAGTCGTTAGAATTAAACTCAAGGAGAAGTTTTCGCAACAAGATGGCAGTTTATTGATGGAACTACAGCGTTTATCTTCTGGTGAAGTCAACTTGGATAATTAA

Protein Analysis

348

Amino Acids

38.65

Weight (kDa)

5.52

Isoelectric Point (pI)

35.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 32 - 88 3.1e-11 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 510
AccI GTMKAC 1 cut(s) 597
AciI CCGC 4 cut(s) 108, 125, 317, 381
AcoI YGGCCR 2 cut(s) 318, 390
AcsI RAATTY 1 cut(s) 234
AfaI GTAC 3 cut(s) 72, 250, 568
AfiI CCNNNNNNNGG 2 cut(s) 510, 819
AflIII ACRYGT 1 cut(s) 179
AgsI TTSAA 8 cut(s) 119, 173, 208, 405, 462, 529, 633, 801
AjnI CCWGG 1 cut(s) 540
AluBI AGCT 1 cut(s) 795
AluI AGCT 1 cut(s) 795
Alw26I GTCTC 1 cut(s) 105
AoxI GGCC 2 cut(s) 318, 390
ApoI RAATTY 1 cut(s) 234
Asp700I GAANNNNTTC 1 cut(s) 362
AsuHPI GGTGA 1 cut(s) 1034
AsuNHI GCTAGC 1 cut(s) 64
BalI TGGCCA 1 cut(s) 392
BccI CCATC 4 cut(s) 512, 659, 977, 991
BciT130I CCWGG 1 cut(s) 542
BclI TGATCA 1 cut(s) 396
BcoDI GTCTC 1 cut(s) 105
BfaI CTAG 3 cut(s) 65, 221, 683
BfmI CTRYAG 2 cut(s) 289, 1004
BisI GCNGC 2 cut(s) 318, 382
BlsI GCNGC 2 cut(s) 319, 383
BmcAI AGTACT 1 cut(s) 568
Bme1390I CCNGG 1 cut(s) 542
BmiI GGNNCC 1 cut(s) 757
BmrFI CCNGG 1 cut(s) 542
BmsI GCATC 1 cut(s) 900
BmtI GCTAGC 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 944
Bsa29I ATCGAT 1 cut(s) 216
BsaJI CCNNGG 1 cut(s) 509
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bsc4I CCNNNNNNNGG 2 cut(s) 510, 819
Bse118I RCCGGY 1 cut(s) 431
Bse1I ACTGG 3 cut(s) 170, 611, 692
Bse3DI GCAATG 1 cut(s) 378
BseBI CCWGG 1 cut(s) 542
BseCI ATCGAT 1 cut(s) 216
BseDI CCNNGG 1 cut(s) 509
BseGI GGATG 3 cut(s) 504, 764, 881
BseLI CCNNNNNNNGG 2 cut(s) 510, 819
BseMI GCAATG 1 cut(s) 378
BseNI ACTGG 3 cut(s) 170, 611, 692
BsgI GTGCAG 1 cut(s) 78
BshFI GGCC 2 cut(s) 320, 392
BshVI ATCGAT 1 cut(s) 216
BsiSI CCGG 1 cut(s) 432
BslFI GGGAC 1 cut(s) 656
BslI CCNNNNNNNGG 2 cut(s) 510, 819
BsmAI GTCTC 1 cut(s) 105
BsmBI CGTCTC 1 cut(s) 105
BsmFI GGGAC 1 cut(s) 656
BsnI GGCC 2 cut(s) 320, 392
Bsp143I GATC 3 cut(s) 213, 217, 396
BspACI CCGC 4 cut(s) 108, 125, 317, 381
BspANI GGCC 2 cut(s) 320, 392
BspDI ATCGAT 1 cut(s) 216
BspLI GGNNCC 1 cut(s) 757
BspMAI CTGCAG 1 cut(s) 293
BspOI GCTAGC 1 cut(s) 68
BspQI GCTCTTC 1 cut(s) 802
BsrDI GCAATG 1 cut(s) 378
BsrFI RCCGGY 1 cut(s) 431
BsrI ACTGG 3 cut(s) 170, 611, 692
BssAI RCCGGY 1 cut(s) 431
BssECI CCNNGG 1 cut(s) 509
BssMI GATC 3 cut(s) 213, 217, 396
BssT1I CCWWGG 1 cut(s) 509
Bst2UI CCWGG 1 cut(s) 542
Bst4CI ACNGT 3 cut(s) 15, 424, 709
Bst6I CTCTTC 2 cut(s) 286, 802
BstC8I GCNNGC 2 cut(s) 66, 148
BstENI CCTNNNNNAGG 1 cut(s) 817
BstF5I GGATG 3 cut(s) 504, 764, 881
BstKTI GATC 3 cut(s) 216, 220, 399
BstMAI GTCTC 1 cut(s) 105
BstMBI GATC 3 cut(s) 213, 217, 396
BstMWI GCNNNNNNNGC 2 cut(s) 65, 843
BstNI CCWGG 1 cut(s) 542
BstNSI RCATGY 1 cut(s) 183
BstSCI CCNGG 1 cut(s) 540
BstSFI CTRYAG 2 cut(s) 289, 1004
Bsu15I ATCGAT 1 cut(s) 216
BsuRI GGCC 2 cut(s) 320, 392
BsuTUI ATCGAT 1 cut(s) 216
BtsCI GGATG 3 cut(s) 504, 764, 881
BtsI GCAGTG 3 cut(s) 66, 298, 366
BtsIMutI CAGTG 5 cut(s) 66, 298, 366, 620, 661
Cac8I GCNNGC 2 cut(s) 66, 148
Cfr10I RCCGGY 1 cut(s) 431
ClaI ATCGAT 1 cut(s) 216
Csp6I GTAC 3 cut(s) 71, 249, 567
CviAII CATG 8 cut(s) 180, 394, 576, 602, 661, 679, 727, 806
CviQI GTAC 3 cut(s) 71, 249, 567
DpnI GATC 3 cut(s) 215, 219, 398
DpnII GATC 3 cut(s) 213, 217, 396
EaeI YGGCCR 2 cut(s) 318, 390
Eam1104I CTCTTC 2 cut(s) 286, 802
EarI CTCTTC 2 cut(s) 286, 802
Eco130I CCWWGG 1 cut(s) 509
Eco32I GATATC 1 cut(s) 747
EcoNI CCTNNNNNAGG 1 cut(s) 817
EcoRII CCWGG 1 cut(s) 540
EcoRV GATATC 1 cut(s) 747
EcoT14I CCWWGG 1 cut(s) 509
EcoT22I ATGCAT 1 cut(s) 589
ErhI CCWWGG 1 cut(s) 509
Esp3I CGTCTC 1 cut(s) 105
FaeI CATG 8 cut(s) 183, 397, 579, 605, 664, 682, 730, 809
FaqI GGGAC 1 cut(s) 656
FatI CATG 8 cut(s) 179, 393, 575, 601, 660, 678, 726, 805
FauI CCCGC 1 cut(s) 132
FbaI TGATCA 1 cut(s) 396
FblI GTMKAC 1 cut(s) 597
Fnu4HI GCNGC 2 cut(s) 318, 382
FokI GGATG 3 cut(s) 491, 751, 888
Fsp4HI GCNGC 2 cut(s) 318, 382
FspBI CTAG 3 cut(s) 65, 221, 683
GluI GCNGC 2 cut(s) 318, 382
HaeIII GGCC 2 cut(s) 320, 392
HapII CCGG 1 cut(s) 432
Hin1II CATG 8 cut(s) 183, 397, 579, 605, 664, 682, 730, 809
HincII GTYRAC 2 cut(s) 187, 1030
HindII GTYRAC 2 cut(s) 187, 1030
HinfI GANTC 3 cut(s) 723, 761, 809
HpaII CCGG 1 cut(s) 432
HphI GGTGA 1 cut(s) 1034
Hpy166II GTNNAC 6 cut(s) 187, 251, 265, 487, 598, 1030
Hpy188I TCNGA 4 cut(s) 137, 445, 744, 760
Hpy188III TCNNGA 2 cut(s) 205, 221
Hpy8I GTNNAC 6 cut(s) 187, 251, 265, 487, 598, 1030
Hpy99I CGWCG 1 cut(s) 709
HpyAV CCTTC 3 cut(s) 286, 535, 778
HpyCH4III ACNGT 3 cut(s) 15, 424, 709
HpyCH4IV ACGT 2 cut(s) 103, 114
HpyCH4V TGCA 7 cut(s) 59, 291, 371, 438, 579, 587, 837
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 843
HpySE526I ACGT 2 cut(s) 103, 114
Hsp92II CATG 8 cut(s) 183, 397, 579, 605, 664, 682, 730, 809
Ksp22I TGATCA 1 cut(s) 396
Kzo9I GATC 3 cut(s) 213, 217, 396
LguI GCTCTTC 1 cut(s) 802
LmnI GCTCC 1 cut(s) 143
LweI GCATC 1 cut(s) 900
MaeI CTAG 3 cut(s) 65, 221, 683
MaeII ACGT 2 cut(s) 103, 114
MaeIII GTNAC 3 cut(s) 152, 449, 656
MalI GATC 3 cut(s) 215, 219, 398
MboI GATC 3 cut(s) 213, 217, 396
MboII GAAGA 4 cut(s) 273, 367, 789, 1008
MfeI CAATTG 1 cut(s) 838
MlsI TGGCCA 1 cut(s) 392
MluCI AATT 9 cut(s) 91, 138, 234, 270, 571, 628, 838, 951, 1039
MluNI TGGCCA 1 cut(s) 392
MlyI GAGTC 1 cut(s) 732
MmeI TCCRAC 1 cut(s) 309
MnlI CCTC 5 cut(s) 217, 322, 706, 823, 844
Mox20I TGGCCA 1 cut(s) 392
Mph1103I ATGCAT 1 cut(s) 589
MroXI GAANNNNTTC 1 cut(s) 362
MscI TGGCCA 1 cut(s) 392
MseI TTAA 4 cut(s) 48, 243, 954, 1042
MslI CAYNNNNRTG 2 cut(s) 371, 874
Msp20I TGGCCA 1 cut(s) 392
MspI CCGG 1 cut(s) 432
MspR9I CCNGG 1 cut(s) 542
MunI CAATTG 1 cut(s) 838
MvaI CCWGG 1 cut(s) 542
MwoI GCNNNNNNNGC 2 cut(s) 65, 843
NdeII GATC 3 cut(s) 213, 217, 396
NheI GCTAGC 1 cut(s) 64
NlaIII CATG 8 cut(s) 183, 397, 579, 605, 664, 682, 730, 809
NlaIV GGNNCC 1 cut(s) 757
NmuCI GTSAC 2 cut(s) 449, 656
NsiI ATGCAT 1 cut(s) 589
NspI RCATGY 1 cut(s) 183
PciI ACATGT 1 cut(s) 179
PciSI GCTCTTC 1 cut(s) 802
PdmI GAANNNNTTC 1 cut(s) 362
PfeI GAWTC 2 cut(s) 761, 809
PflFI GACNNNGTC 1 cut(s) 668
PflMI CCANNNNNTGG 1 cut(s) 510
PkrI GCNGC 2 cut(s) 319, 383
PleI GAGTC 1 cut(s) 731
PpsI GAGTC 1 cut(s) 731
PscI ACATGT 1 cut(s) 179
Psp6I CCWGG 1 cut(s) 540
PspGI CCWGG 1 cut(s) 540
PspN4I GGNNCC 1 cut(s) 757
PstI CTGCAG 1 cut(s) 293
PsyI GACNNNGTC 1 cut(s) 668
RsaI GTAC 3 cut(s) 72, 250, 568
RsaNI GTAC 3 cut(s) 71, 249, 567
RseI CAYNNNNRTG 2 cut(s) 371, 874
SapI GCTCTTC 1 cut(s) 802
SaqAI TTAA 4 cut(s) 48, 243, 954, 1042
SatI GCNGC 2 cut(s) 318, 382
Sau3AI GATC 3 cut(s) 213, 217, 396
ScaI AGTACT 1 cut(s) 568
SchI GAGTC 1 cut(s) 732
ScrFI CCNGG 1 cut(s) 542
SfaNI GCATC 1 cut(s) 900
SfcI CTRYAG 2 cut(s) 289, 1004
SmiMI CAYNNNNRTG 2 cut(s) 371, 874
SmlI CTYRAG 1 cut(s) 959
SmoI CTYRAG 1 cut(s) 959
Sse9I AATT 9 cut(s) 91, 138, 234, 270, 571, 628, 838, 951, 1039
SsiI CCGC 4 cut(s) 108, 125, 317, 381
SspI AATATT 2 cut(s) 457, 643
SspMI CTAG 3 cut(s) 65, 221, 683
StyD4I CCNGG 1 cut(s) 540
StyI CCWWGG 1 cut(s) 509
TaaI ACNGT 3 cut(s) 15, 424, 709
TaiI ACGT 2 cut(s) 106, 117
TaqI TCGA 2 cut(s) 216, 704
TaqII GACCGA 1 cut(s) 884
TasI AATT 9 cut(s) 91, 138, 234, 270, 571, 628, 838, 951, 1039
TatI WGTACW 1 cut(s) 566
TauI GCSGC 2 cut(s) 320, 384
TfiI GAWTC 2 cut(s) 761, 809
Tru1I TTAA 4 cut(s) 48, 243, 954, 1042
Tru9I TTAA 4 cut(s) 48, 243, 954, 1042
TscAI CASTG 5 cut(s) 66, 298, 373, 620, 661
TseFI GTSAC 2 cut(s) 449, 656
Tsp45I GTSAC 2 cut(s) 449, 656
TspDTI ATGAA 3 cut(s) 14, 564, 822
TspRI CASTG 5 cut(s) 66, 298, 373, 620, 661
Tth111I GACNNNGTC 1 cut(s) 668
Van91I CCANNNNNTGG 1 cut(s) 510
XagI CCTNNNNNAGG 1 cut(s) 817
XapI RAATTY 1 cut(s) 234
XbaI TCTAGA 1 cut(s) 220
XceI RCATGY 1 cut(s) 183
XcmI CCANNNNNNNNNTGG 1 cut(s) 658
XmiI GTMKAC 1 cut(s) 597
XmnI GAANNNNTTC 1 cut(s) 362
XspI CTAG 3 cut(s) 65, 221, 683
ZrmI AGTACT 1 cut(s) 568
Zsp2I ATGCAT 1 cut(s) 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.