RchiOBHm_Chr5g0046061

Wall-associated receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000052
Physical Location & Seq
Reverse (-)
42109573 .. 42112406
2834 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32409

Sequence Viewer

Length: 2286 bp
ATGGCGTTGCGACTCTCTGTGGTGGCAGTGCTACTCCTGTTATCGGCGGCTAGTACTACTACTACGACAACAGCAGCTCCTGCTCAAGCCCTGACTGGCTGCTCAGACAAGTGCGGCAATCTCACAATTCCATATCCATTTGGCATGAAGACGGATTGTTTACTTAGAAAAGAATTCTTTATCAATTGCAGCCATACCACCCAACCACCAACAGCATATTTGATGTACAGTGATCTCATTGTTACTAACATTTACCTTGATGAAGGTGAGTTGCAAATATTGAACGATGTAGGGCGAGCTTGTTACGATGAAGAGGGCGGCTATCAAACTGACAGAAGCATAAAACCTCAGCTCTTGTTGCAACCTCCATACACCATATCCAATACCAAAAACAAGTTCTACGCCGTTGGATGTGACACTTCCGCAATTGTTAACGCCTTCCGAGGGAAAGAAGAGTTCATTACTGGGTGCATGTCCATATGCAACAGTCTTGGCAGTGTGGAAAAATCTTGCTCTGGAGTTGGGTGTTGCCAGATTAACATCCCCAGCGGGCTGTACAATCTGACGGTGGAATTAAATAGCTTCAAAAATCATACGCGTATATGGAACTTTAATCCCTGCAGCTACGGCTTCATTGCAGAGGAAGGCCTGTTCAATTTCTCCCCTTCGAGTTTTGAAGACCTGAACTACAGTGCATTGCTTCCAATGGTTGCTAATTGGGCAATTGGGAATGAAATAGATACCTGTGAGACAGCTCAAAAAAGGTTGGATTACGCATGCAATGCTAATAGCAACTGCGTCAACAGGCCTATCGATGGGTCTGTAGGTTACTTGTGCCAGTGCTTGCCTGGTTACGAAGGAAACCCCTACCATCCAGACGGTTGCCAAGATATTAATGAGTGCATGGCTCTAAACCCCTGCCAGAATGGAGAGTGCTTAAATTCACCTTCAGGTTACTCTTGTTTATGTCACAAAGGATACAAACACAACGGCATCAGTTGCATCAAAGATGATTCCGAAAGACGGTTCAAGATCGTTCTCCTGCGTTTTGTCTCATTGGTTGGCGGCAGTACTCTTGGACTAATATTTCTATCCATTGCTGCATGGTGGTTGGTCCAAGTCATAAAGAAAAGGAAAAACAAAAAACGAAAGGAGAAGTTTTTTAAACAAAATGGTGGTTTAGTATTGGAGCAACAATCATCTTCTGGTGATCAAGCTAATGTTCAAAAAATTAAGTTGTTCAATTCAAGGGAGCTGGAGAAAGCCACGGACAAGTTTAGCATAGATAGAATTCTTGGCCAGGGAGGGCAAGGTACTGTTTACAAGGGAATGTTGATGGATGGACAAATTGTTGCTGTAAAAAAGTCTAAAATAGTTAACGGAGGCGAAGTTCAACAATTCATTAATGAAATTGTGATTCTTTCACAAATTAACCACAGAAATGTGGTTAAACTATTGGGTTGTTGTTTGGAGACCGAAATTCCCCTCTTGGTCTATGAATTTCTACCGAACGGAACACTTTCTCAGTACATTAATGGCCAAGATGAGGAGTTTCCTCTTACATGGGGAACGCGATTGCGAGTGTCTACAGAAGTTGCTAGAGCTCTTTCATATTTACACTCGGCAGCTTCTATTCCTATTTACCACCGGGACATCAAGTCCACCAACATACTCTTGGATGCCAAGTATAGAGCAAAAATTGCAGATTTTGGGACTTCAAGATCCATTTCCATTGACCAGACACACCTCACCACACTAGTACATGGAACATTTGGTTATTTGGACCCAGAATACTTTCAATCAAGCCAATTTACAGAAAAGAGTGATGTTTACAGCTTCGGTGTGGTCCTTGTTGAGCTCTTGACTGGACAAAAACCAGTTTCCATGATGAGATCGCAAGAAAGTAGAAGCTTAGCAACTCATTTTCTTCTTTCCATGGAGCAGAATCGTTTGTTTGATATTCTTGACGCTCAAGTTATGAAAGATGGTAGCAAAGAAGAAATTATAGCAGTTGCTAACCTTGCGCAAAGATGCTTAAATTTGAATGGAAGGAAACGTCCTACTATGAAAGAAGTAGCAGTGGAACTGGAGGGCGTTCAATTGGCAGTCAAAGACGCTGTTCATGTTCAACAAAATTTGGTAGAGGAAGGAGATGTCGGAACTGATGAAATAACCACAGAGGCTTATTGCGATGTTGTTTCTACATCAATTGGTCCTTTTACAGATGGTGGTACTACAGGTTCTCTATCCGATGAACAACCACTATTGTTTTACAATACACAGTAG

Protein Analysis

761

Amino Acids

84.1

Weight (kDa)

5.63

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 34 - 93 4.1e-09 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 427 - 692 6.1e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 428 - 695 3.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2025
AccI GTMKAC 1 cut(s) 1586
AccII CGCG 2 cut(s) 598, 1573
AciI CCGC 6 cut(s) 47, 114, 318, 423, 549, 1065
AclWI GGATC 1 cut(s) 1716
AcoI YGGCCR 2 cut(s) 1297, 1537
AcsI RAATTY 7 cut(s) 173, 940, 1290, 1479, 1499, 2038, 2134
AcuI CTGAAG 1 cut(s) 933
AfaI GTAC 8 cut(s) 55, 227, 557, 1072, 1315, 1529, 1761, 2233
AfiI CCNNNNNNNGG 5 cut(s) 43, 444, 815, 1023, 1546
AflIII ACRYGT 1 cut(s) 596
AhdI GACNNNNNGTC 1 cut(s) 1657
AhlI ACTAGT 1 cut(s) 1756
AjnI CCWGG 2 cut(s) 847, 1299
AjuI GAANNNNNNNTTGG 2 cut(s) 380, 412
AloI GAACNNNNNNTCC 4 cut(s) 635, 667, 1374, 1406
Alw21I GWGCWC 2 cut(s) 1606, 1860
Alw26I GTCTC 3 cut(s) 743, 1057, 1466
AlwI GGATC 1 cut(s) 1716
AlwNI CAGNNNCTG 1 cut(s) 80
AoxI GGCC 4 cut(s) 646, 806, 1297, 1537
ApeKI GCWGC 6 cut(s) 74, 99, 189, 621, 1100, 1625
ApoI RAATTY 7 cut(s) 173, 940, 1290, 1479, 1499, 2038, 2134
AseI ATTAAT 3 cut(s) 894, 1404, 1533
Asp700I GAANNNNTTC 2 cut(s) 1519, 1794
AspLEI GCGC 1 cut(s) 2026
AspS9I GGNCC 4 cut(s) 1114, 1783, 1846, 2213
AsuC2I CCSGG 1 cut(s) 1649
AsuHPI GGTGA 4 cut(s) 278, 936, 1220, 1741
AvaII GGWCC 4 cut(s) 1114, 1783, 1846, 2213
BalI TGGCCA 2 cut(s) 1299, 1539
BanII GRGCYC 2 cut(s) 1606, 1860
BbsI GAAGAC 2 cut(s) 155, 684
Bbv12I GWGCWC 2 cut(s) 1606, 1860
BbvCI CCTCAGC 1 cut(s) 348
BbvI GCAGC 6 cut(s) 86, 86, 201, 633, 1087, 1637
BccI CCATC 6 cut(s) 809, 879, 1330, 1334, 1979, 2219
BceAI ACGGC 3 cut(s) 389, 643, 1006
BciT130I CCWGG 2 cut(s) 849, 1301
BciVI GTATCC 1 cut(s) 971
BclI TGATCA 1 cut(s) 1210
BcnI CCSGG 1 cut(s) 1649
BcoDI GTCTC 3 cut(s) 743, 1057, 1466
BcuI ACTAGT 1 cut(s) 1756
BfaI CTAG 3 cut(s) 51, 1599, 1757
BfmI CTRYAG 5 cut(s) 619, 688, 822, 1587, 2235
BfuI GTATCC 1 cut(s) 971
BlpI GCTNAGC 1 cut(s) 1912
BmcAI AGTACT 2 cut(s) 55, 1072
Bme1390I CCNGG 3 cut(s) 849, 1301, 1649
Bme18I GGWCC 4 cut(s) 1114, 1783, 1846, 2213
BmeRI GACNNNNNGTC 1 cut(s) 1657
BmgT120I GGNCC 4 cut(s) 1114, 1783, 1846, 2213
BmiI GGNNCC 1 cut(s) 1785
BmrFI CCNGG 3 cut(s) 849, 1301, 1649
BmrI ACTGGG 1 cut(s) 474
BmsI GCATC 4 cut(s) 1002, 1011, 1669, 2021
BmuI ACTGGG 1 cut(s) 474
BpiI GAAGAC 2 cut(s) 155, 684
BpmI CTGGAG 3 cut(s) 537, 1277, 2108
Bpu10I CCTNAGC 1 cut(s) 348
Bpu1102I GCTNAGC 1 cut(s) 1912
BpuEI CTTGAG 2 cut(s) 69, 1956
BpuMI CCSGG 1 cut(s) 1649
Bsa29I ATCGAT 1 cut(s) 813
BsaBI GATNNNNATC 1 cut(s) 539
BsaI GGTCTC 1 cut(s) 1466
BsaJI CCNNGG 4 cut(s) 442, 1266, 1300, 1935
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 1374, 1404
Bsc4I CCNNNNNNNGG 5 cut(s) 43, 444, 815, 1023, 1546
Bse1I ACTGG 6 cut(s) 100, 469, 838, 1870, 1877, 2091
Bse3DI GCAATG 4 cut(s) 633, 695, 787, 1095
Bse8I GATNNNNATC 1 cut(s) 539
BseBI CCWGG 2 cut(s) 849, 1301
BseCI ATCGAT 1 cut(s) 813
BseDI CCNNGG 4 cut(s) 442, 1266, 1300, 1935
BseGI GGATG 5 cut(s) 416, 540, 871, 1345, 1684
BseJI GATNNNNATC 1 cut(s) 539
BseLI CCNNNNNNNGG 5 cut(s) 43, 444, 815, 1023, 1546
BseMI GCAATG 4 cut(s) 633, 695, 787, 1095
BseMII CTCAG 3 cut(s) 117, 362, 1538
BseNI ACTGG 6 cut(s) 100, 469, 838, 1870, 1877, 2091
BseRI GAGGAG 1 cut(s) 1562
BseXI GCAGC 6 cut(s) 86, 86, 201, 633, 1087, 1637
BseYI CCCAGC 1 cut(s) 545
Bsh1236I CGCG 2 cut(s) 598, 1573
BshFI GGCC 4 cut(s) 648, 808, 1299, 1539
BshVI ATCGAT 1 cut(s) 813
BsiHKAI GWGCWC 2 cut(s) 1606, 1860
BsiSI CCGG 1 cut(s) 1648
BslFI GGGAC 2 cut(s) 1664, 1726
BslI CCNNNNNNNGG 5 cut(s) 43, 444, 815, 1023, 1546
BsmAI GTCTC 3 cut(s) 743, 1057, 1466
BsmFI GGGAC 2 cut(s) 1664, 1726
BsnI GGCC 4 cut(s) 648, 808, 1299, 1539
Bso31I GGTCTC 1 cut(s) 1466
Bsp1286I GDGCHC 2 cut(s) 1606, 1860
Bsp1407I TGTACA 2 cut(s) 225, 555
Bsp143I GATC 5 cut(s) 232, 1032, 1210, 1721, 1892
Bsp1720I GCTNAGC 1 cut(s) 1912
Bsp19I CCATGG 1 cut(s) 1935
BspACI CCGC 6 cut(s) 47, 114, 318, 423, 549, 1065
BspANI GGCC 4 cut(s) 648, 808, 1299, 1539
BspCNI CTCAG 3 cut(s) 116, 361, 1537
BspDI ATCGAT 1 cut(s) 813
BspFNI CGCG 2 cut(s) 598, 1573
BspLI GGNNCC 1 cut(s) 1785
BspMAI CTGCAG 1 cut(s) 623
BspPI GGATC 1 cut(s) 1716
BspTNI GGTCTC 1 cut(s) 1466
BsrDI GCAATG 4 cut(s) 633, 695, 787, 1095
BsrGI TGTACA 2 cut(s) 225, 555
BsrI ACTGG 6 cut(s) 100, 469, 838, 1870, 1877, 2091
BssECI CCNNGG 4 cut(s) 442, 1266, 1300, 1935
BssMI GATC 5 cut(s) 232, 1032, 1210, 1721, 1892
BssT1I CCWWGG 1 cut(s) 1935
Bst2UI CCWGG 2 cut(s) 849, 1301
Bst4CI ACNGT 8 cut(s) 230, 488, 568, 692, 881, 1026, 1318, 2283
Bst6I CTCTTC 2 cut(s) 306, 447
BstAPI GCANNNNNTGC 4 cut(s) 80, 782, 999, 1700
BstAUI TGTACA 2 cut(s) 225, 555
BstC8I GCNNGC 4 cut(s) 297, 551, 778, 845
BstDEI CTNAG 5 cut(s) 103, 164, 348, 1524, 1912
BstDSI CCRYGG 2 cut(s) 1266, 1935
BstF5I GGATG 5 cut(s) 416, 540, 871, 1345, 1684
BstFNI CGCG 2 cut(s) 598, 1573
BstHHI GCGC 1 cut(s) 2026
BstKTI GATC 5 cut(s) 235, 1035, 1213, 1724, 1895
BstMAI GTCTC 3 cut(s) 743, 1057, 1466
BstMBI GATC 5 cut(s) 232, 1032, 1210, 1721, 1892
BstMWI GCNNNNNNNGC 8 cut(s) 80, 358, 627, 719, 782, 999, 1700, 2021
BstNI CCWGG 2 cut(s) 849, 1301
BstNSI RCATGY 2 cut(s) 475, 780
BstSCI CCNGG 3 cut(s) 847, 1299, 1647
BstSFI CTRYAG 5 cut(s) 619, 688, 822, 1587, 2235
BstUI CGCG 2 cut(s) 598, 1573
BstV1I GCAGC 6 cut(s) 86, 86, 201, 633, 1087, 1637
BstV2I GAAGAC 2 cut(s) 155, 684
BstX2I RGATCY 1 cut(s) 1721
BstYI RGATCY 1 cut(s) 1721
Bsu15I ATCGAT 1 cut(s) 813
BsuI GTATCC 1 cut(s) 971
BsuRI GGCC 4 cut(s) 648, 808, 1299, 1539
BsuTUI ATCGAT 1 cut(s) 813
BtgI CCRYGG 2 cut(s) 1266, 1935
BtgZI GCGATG 1 cut(s) 2205
BtsCI GGATG 5 cut(s) 416, 540, 871, 1345, 1684
BtsI GCAGTG 3 cut(s) 33, 502, 2085
BtsIMutI CAGTG 6 cut(s) 33, 235, 502, 697, 845, 2085
Cac8I GCNNGC 4 cut(s) 297, 551, 778, 845
CaiI CAGNNNCTG 1 cut(s) 80
CfoI GCGC 1 cut(s) 2026
Cfr13I GGNCC 4 cut(s) 1114, 1783, 1846, 2213
ClaI ATCGAT 1 cut(s) 813
CseI GACGC 3 cut(s) 787, 1976, 2123
Csp6I GTAC 8 cut(s) 54, 226, 556, 1071, 1314, 1528, 1760, 2232
CviQI GTAC 8 cut(s) 54, 226, 556, 1071, 1314, 1528, 1760, 2232
DdeI CTNAG 5 cut(s) 103, 164, 348, 1524, 1912
DpnI GATC 5 cut(s) 234, 1034, 1212, 1723, 1894
DpnII GATC 5 cut(s) 232, 1032, 1210, 1721, 1892
DraI TTTAAA 1 cut(s) 1165
DriI GACNNNNNGTC 1 cut(s) 1657
EaeI YGGCCR 2 cut(s) 1297, 1537
Eam1104I CTCTTC 2 cut(s) 306, 447
Eam1105I GACNNNNNGTC 1 cut(s) 1657
EarI CTCTTC 2 cut(s) 306, 447
Ecl136II GAGCTC 2 cut(s) 1604, 1858
Eco130I CCWWGG 1 cut(s) 1935
Eco147I AGGCCT 2 cut(s) 648, 808
Eco24I GRGCYC 2 cut(s) 1606, 1860
Eco31I GGTCTC 1 cut(s) 1466
Eco47I GGWCC 4 cut(s) 1114, 1783, 1846, 2213
Eco53kI GAGCTC 2 cut(s) 1604, 1858
Eco57I CTGAAG 1 cut(s) 933
EcoICRI GAGCTC 2 cut(s) 1604, 1858
EcoRI GAATTC 2 cut(s) 173, 1290
EcoRII CCWGG 2 cut(s) 847, 1299
EcoT14I CCWWGG 1 cut(s) 1935
EcoT38I GRGCYC 2 cut(s) 1606, 1860
ErhI CCWWGG 1 cut(s) 1935
FaqI GGGAC 2 cut(s) 1664, 1726
FauI CCCGC 1 cut(s) 542
FauNDI CATATG 1 cut(s) 479
FbaI TGATCA 1 cut(s) 1210
FblI GTMKAC 1 cut(s) 1586
FokI GGATG 5 cut(s) 423, 527, 858, 1352, 1691
FriOI GRGCYC 2 cut(s) 1606, 1860
FspBI CTAG 3 cut(s) 51, 1599, 1757
FspI TGCGCA 1 cut(s) 2025
GlaI GCGC 1 cut(s) 2025
GsaI CCCAGC 1 cut(s) 549
GsuI CTGGAG 3 cut(s) 537, 1277, 2108
HaeIII GGCC 4 cut(s) 648, 808, 1299, 1539
HapII CCGG 1 cut(s) 1648
HgaI GACGC 3 cut(s) 787, 1976, 2123
HhaI GCGC 1 cut(s) 2026
Hin6I GCGC 1 cut(s) 2024
HinP1I GCGC 1 cut(s) 2024
HincII GTYRAC 3 cut(s) 433, 802, 1378
HindII GTYRAC 3 cut(s) 433, 802, 1378
HindIII AAGCTT 1 cut(s) 1909
HinfI GANTC 4 cut(s) 12, 1013, 1417, 1945
HpaI GTTAAC 2 cut(s) 433, 1378
HpaII CCGG 1 cut(s) 1648
HphI GGTGA 4 cut(s) 278, 936, 1220, 1741
Hpy166II GTNNAC 8 cut(s) 161, 433, 802, 1321, 1378, 1587, 1662, 1831
Hpy188I TCNGA 6 cut(s) 106, 443, 564, 1018, 2159, 2251
Hpy188III TCNNGA 6 cut(s) 516, 875, 1030, 1719, 1861, 1964
Hpy8I GTNNAC 8 cut(s) 161, 433, 802, 1321, 1378, 1587, 1662, 1831
HpyAV CCTTC 8 cut(s) 257, 448, 638, 675, 851, 957, 2043, 2141
HpyCH4III ACNGT 8 cut(s) 230, 488, 568, 692, 881, 1026, 1318, 2283
HpyCH4IV ACGT 1 cut(s) 2056
HpyF10VI GCNNNNNNNGC 8 cut(s) 80, 358, 627, 719, 782, 999, 1700, 2021
HpyF3I CTNAG 5 cut(s) 103, 164, 348, 1524, 1912
HpySE526I ACGT 1 cut(s) 2056
HspAI GCGC 1 cut(s) 2024
Ksp22I TGATCA 1 cut(s) 1210
KspAI GTTAAC 2 cut(s) 433, 1378
Kzo9I GATC 5 cut(s) 232, 1032, 1210, 1721, 1892
LmnI GCTCC 4 cut(s) 82, 1189, 1252, 1939
Lsp1109I GCAGC 6 cut(s) 86, 86, 201, 633, 1087, 1637
LweI GCATC 4 cut(s) 1002, 1011, 1669, 2021
MaeI CTAG 3 cut(s) 51, 1599, 1757
MaeII ACGT 1 cut(s) 2056
MaeIII GTNAC 7 cut(s) 241, 302, 413, 827, 851, 953, 968
MalI GATC 5 cut(s) 234, 1034, 1212, 1723, 1894
MboI GATC 5 cut(s) 232, 1032, 1210, 1721, 1892
MboII GAAGA 7 cut(s) 160, 323, 464, 689, 1194, 1919, 2009
MfeI CAATTG 5 cut(s) 184, 426, 723, 2099, 2208
MflI RGATCY 1 cut(s) 1721
MhlI GDGCHC 2 cut(s) 1606, 1860
MlsI TGGCCA 2 cut(s) 1299, 1539
MluI ACGCGT 1 cut(s) 596
MluNI TGGCCA 2 cut(s) 1299, 1539
MlyI GAGTC 1 cut(s) 6
MmeI TCCRAC 3 cut(s) 388, 747, 2137
Mox20I TGGCCA 2 cut(s) 1299, 1539
MroXI GAANNNNTTC 2 cut(s) 1519, 1794
MscI TGGCCA 2 cut(s) 1299, 1539
MslI CAYNNNNRTG 1 cut(s) 1440
Msp20I TGGCCA 2 cut(s) 1299, 1539
MspA1I CMGCKG 1 cut(s) 549
MspI CCGG 1 cut(s) 1648
MspR9I CCNGG 3 cut(s) 849, 1301, 1649
MunI CAATTG 5 cut(s) 184, 426, 723, 2099, 2208
MvaI CCWGG 2 cut(s) 849, 1301
MvnI CGCG 2 cut(s) 598, 1573
MwoI GCNNNNNNNGC 8 cut(s) 80, 358, 627, 719, 782, 999, 1700, 2021
NciI CCSGG 1 cut(s) 1649
NcoI CCATGG 1 cut(s) 1935
NdeI CATATG 1 cut(s) 479
NdeII GATC 5 cut(s) 232, 1032, 1210, 1721, 1892
NlaIV GGNNCC 1 cut(s) 1785
NmeAIII GCCGAG 1 cut(s) 1601
NmuCI GTSAC 2 cut(s) 413, 968
NsbI TGCGCA 1 cut(s) 2025
NspI RCATGY 2 cut(s) 475, 780
PaeI GCATGC 1 cut(s) 780
PceI AGGCCT 2 cut(s) 648, 808
PdmI GAANNNNTTC 2 cut(s) 1519, 1794
PfeI GAWTC 3 cut(s) 1013, 1417, 1945
PleI GAGTC 1 cut(s) 6
PpsI GAGTC 1 cut(s) 6
PshBI ATTAAT 3 cut(s) 894, 1404, 1533
Psp124BI GAGCTC 2 cut(s) 1606, 1860
Psp6I CCWGG 2 cut(s) 847, 1299
PspFI CCCAGC 1 cut(s) 545
PspGI CCWGG 2 cut(s) 847, 1299
PspN4I GGNNCC 1 cut(s) 1785
PspPI GGNCC 4 cut(s) 1114, 1783, 1846, 2213
PsrI GAACNNNNNNTAC 2 cut(s) 2224, 2256
PstI CTGCAG 1 cut(s) 623
PstNI CAGNNNCTG 1 cut(s) 80
PsuI RGATCY 1 cut(s) 1721
RsaI GTAC 8 cut(s) 55, 227, 557, 1072, 1315, 1529, 1761, 2233
RsaNI GTAC 8 cut(s) 54, 226, 556, 1071, 1314, 1528, 1760, 2232
RseI CAYNNNNRTG 1 cut(s) 1440
SacI GAGCTC 2 cut(s) 1606, 1860
Sau3AI GATC 5 cut(s) 232, 1032, 1210, 1721, 1892
Sau96I GGNCC 4 cut(s) 1114, 1783, 1846, 2213
ScaI AGTACT 2 cut(s) 55, 1072
SchI GAGTC 1 cut(s) 6
ScrFI CCNGG 3 cut(s) 849, 1301, 1649
SduI GDGCHC 2 cut(s) 1606, 1860
SfaNI GCATC 4 cut(s) 1002, 1011, 1669, 2021
SfcI CTRYAG 5 cut(s) 619, 688, 822, 1587, 2235
SinI GGWCC 4 cut(s) 1114, 1783, 1846, 2213
SmiMI CAYNNNNRTG 1 cut(s) 1440
SmlI CTYRAG 2 cut(s) 84, 1971
SmoI CTYRAG 2 cut(s) 84, 1971
SpeI ACTAGT 1 cut(s) 1756
SphI GCATGC 1 cut(s) 780
SseBI AGGCCT 2 cut(s) 648, 808
SsiI CCGC 6 cut(s) 47, 114, 318, 423, 549, 1065
SspI AATATT 2 cut(s) 279, 1086
SspMI CTAG 3 cut(s) 51, 1599, 1757
SstI GAGCTC 2 cut(s) 1606, 1860
StuI AGGCCT 2 cut(s) 648, 808
StyD4I CCNGG 3 cut(s) 847, 1299, 1647
StyI CCWWGG 1 cut(s) 1935
TaaI ACNGT 8 cut(s) 230, 488, 568, 692, 881, 1026, 1318, 2283
TaiI ACGT 1 cut(s) 2059
TaqI TCGA 2 cut(s) 668, 813
TaqII GACCGA 1 cut(s) 1490
TatI WGTACW 6 cut(s) 53, 225, 555, 1070, 1527, 1759
TauI GCSGC 4 cut(s) 50, 117, 321, 1068
TfiI GAWTC 3 cut(s) 1013, 1417, 1945
TscAI CASTG 6 cut(s) 33, 235, 502, 697, 845, 2085
TseFI GTSAC 2 cut(s) 413, 968
TseI GCWGC 6 cut(s) 74, 99, 189, 621, 1100, 1625
Tsp45I GTSAC 2 cut(s) 413, 968
TspGWI ACGGA 4 cut(s) 167, 1283, 1395, 1527
TspRI CASTG 6 cut(s) 33, 235, 502, 697, 845, 2085
VpaK11BI GGWCC 4 cut(s) 1114, 1783, 1846, 2213
VspI ATTAAT 3 cut(s) 894, 1404, 1533
XapI RAATTY 7 cut(s) 173, 940, 1290, 1479, 1499, 2038, 2134
XceI RCATGY 2 cut(s) 475, 780
XcmI CCANNNNNNNNNTGG 2 cut(s) 845, 1672
XmiI GTMKAC 1 cut(s) 1586
XmnI GAANNNNTTC 2 cut(s) 1519, 1794
XspI CTAG 3 cut(s) 51, 1599, 1757
ZrmI AGTACT 2 cut(s) 55, 1072
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.