Rorug04G0124000

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
19618749 .. 19625446
6698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0124000.1

Sequence Viewer

Length: 1293 bp
ATGATTGCAGCCACTTCTCCTGTCAACTCCGCATCCCCGATCCCCGCCCCGAACCCGACCCGAACCCGCCTCCCGCGCCAGCTCCGCCTAGGGTTTCCTTCCTTCTCCGAGCCAAGGCTCTGTGCGACGCGGCCCAGGATGGACTTCCTGCACAGAATCGTAGGCGGAGGCTGCTTCCGGGGATCCACGCGCCAGGGGCTGAAGGTCGAGATTGATAGCGGCGGCGAGGATATCTTCGATGCCGCCGCCGCCGCCGCCAACAACGCCGTTCCCGAACATCTCGTCGTCATGGTCAATGGAATTATCGGCAGTGCTTCAGATTGGAGATATGCTGCAGATCAGTTTGTGAAAAAGCTTCCTGATAAAGTAATTGTGCACCGCAGTGAATGTAACTCTTCTAGATTGACATTTGATGGAGTTGACTTGATGGGTGAGAGGCTAGCTGAGGAGGTATTAGCTGTTATCAGAAAAAGGTCAGAGGTGCGGAAAATTTCCTTTGTCGCTCACTCTTTGGGGGGGTTGGTTGCAAGGTATGCTATCGGGAGGCTGTACGAACCTTTTCCAAAACCCGAACCCTCAGGTGATAATGGTAATTGCTTAATTGAAGCGAATACAAATAATTTGACACAATCCCTTGACCAGCCTCACCAAGGTACGATTGCTGGATTACAAGCTATGAATTTTATAACGGTTGCAACACCACATCTTGGCTCAAGGGGAAATAAACAGCTCCCATTTCTCTGTGGTCTTCCCTTTCTTGAAAGAAGAGCTTCTCAAGCTGCCCACTTTATTGCGGGGAGATCCGGGAAGCATCTCTTCCTAACAGATAAAGACGATGGCAAACCTCCCCTTCTTCTTCGAATGGTTAATGACTCTGACGACCTGAAATTCGTGTCAGCATTACGTGCATTTAAGCGTCGTGTGGCATATGCTAATGCAAATTTTGATCATATGGTTGGGTGGAGAACATCATCGATTCGACGTCAACATGAACTTCCGAAGTCCAATCTACTTGTAACAGATGAGAAATATCCACATATTGTACATGTGAAACAAGAAACTTTTGATGATATTCATAATAATGCATCTTCTGCTGCTGAAAACCAAAATATTGACTTGGAAGAGGCGATGATCAGAGGTCTCACTCAAATACCATGGGAACGTGTAGATGTCAGCTTTCAAAAGAGCCGACAAAGATACATTGCTCATAATACCATTCAGGTCAAAAGGTATTGGTTGAATTCTGATGGTGCTGATGTGGTTTTCCATATCATAGATTACTTCCTTCTCTAA

Protein Analysis

430

Amino Acids

47.95

Weight (kDa)

9.13

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF676 PF05057 91 - 323 4.9e-68 Putative serine esterase (DUF676)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 686
AatII GACGTC 1 cut(s) 985
AccB7I CCANNNNNTGG 1 cut(s) 707
AccII CGCG 3 cut(s) 76, 130, 190
AclWI GGATC 4 cut(s) 34, 177, 190, 795
AcsI RAATTY 5 cut(s) 489, 679, 887, 940, 1240
AcuI CTGAAG 2 cut(s) 221, 300
AcyI GRCGYC 1 cut(s) 982
AfaI GTAC 3 cut(s) 551, 655, 1044
AfiI CCNNNNNNNGG 3 cut(s) 114, 650, 707
AflIII ACRYGT 2 cut(s) 1045, 1162
AgsI TTSAA 4 cut(s) 605, 761, 1181, 1240
AjnI CCWGG 2 cut(s) 134, 192
AleI CACNNNNGTG 1 cut(s) 381
AluBI AGCT 9 cut(s) 82, 355, 443, 458, 674, 730, 770, 779, 1176
AluI AGCT 9 cut(s) 82, 355, 443, 458, 674, 730, 770, 779, 1176
Alw21I GWGCWC 1 cut(s) 378
Alw26I GTCTC 1 cut(s) 1145
Alw44I GTGCAC 1 cut(s) 374
AlwI GGATC 4 cut(s) 34, 177, 190, 795
AlwNI CAGNNNCTG 1 cut(s) 199
AoxI GGCC 1 cut(s) 131
ApaLI GTGCAC 1 cut(s) 374
ApeKI GCWGC 5 cut(s) 8, 171, 332, 779, 1094
ApoI RAATTY 5 cut(s) 489, 679, 887, 940, 1240
ArsI GACNNNNNNTTYG 4 cut(s) 267, 299, 872, 904
Asp700I GAANNNNTTC 2 cut(s) 558, 769
AspA2I CCTAGG 1 cut(s) 88
AspLEI GCGC 2 cut(s) 78, 192
AspS9I GGNCC 1 cut(s) 132
AsuC2I CCSGG 2 cut(s) 179, 805
AsuHPI GGTGA 3 cut(s) 443, 593, 638
AsuII TTCGAA 1 cut(s) 859
AsuNHI GCTAGC 1 cut(s) 439
AvrII CCTAGG 1 cut(s) 88
AxyI CCTNAGG 1 cut(s) 577
BaeGI GKGCMC 1 cut(s) 378
BamHI GGATCC 1 cut(s) 182
BbsI GAAGAC 1 cut(s) 740
Bbv12I GWGCWC 1 cut(s) 378
BbvCI CCTCAGC 1 cut(s) 444
BbvI GCAGC 5 cut(s) 20, 158, 319, 766, 1081
BccI CCATC 5 cut(s) 133, 407, 421, 830, 1241
BceAI ACGGC 1 cut(s) 251
BciT130I CCWGG 2 cut(s) 136, 194
BclI TGATCA 2 cut(s) 946, 1131
BcnI CCSGG 2 cut(s) 179, 805
BcoDI GTCTC 1 cut(s) 1145
BfaI CTAG 3 cut(s) 89, 399, 440
BfmI CTRYAG 1 cut(s) 333
BlnI CCTAGG 1 cut(s) 88
Bme1390I CCNGG 4 cut(s) 136, 179, 194, 805
BmgT120I GGNCC 1 cut(s) 132
BmiI GGNNCC 1 cut(s) 184
BmrFI CCNGG 4 cut(s) 136, 179, 194, 805
BmsI GCATC 4 cut(s) 41, 229, 820, 1094
BmtI GCTAGC 1 cut(s) 443
BpiI GAAGAC 1 cut(s) 740
Bpu10I CCTNAGC 1 cut(s) 444
Bpu14I TTCGAA 1 cut(s) 859
BpuEI CTTGAG 2 cut(s) 697, 759
BpuMI CCSGG 2 cut(s) 179, 805
Bsa29I ATCGAT 1 cut(s) 974
BsaAI YACGTR 1 cut(s) 905
BsaHI GRCGYC 1 cut(s) 982
BsaI GGTCTC 1 cut(s) 1145
BsaJI CCNNGG 7 cut(s) 88, 113, 134, 178, 193, 649, 1154
Bsc4I CCNNNNNNNGG 3 cut(s) 114, 650, 707
Bse21I CCTNAGG 1 cut(s) 577
Bse3DI GCAATG 1 cut(s) 1200
BseBI CCWGG 2 cut(s) 136, 194
BseCI ATCGAT 1 cut(s) 974
BseDI CCNNGG 7 cut(s) 88, 113, 134, 178, 193, 649, 1154
BseGI GGATG 2 cut(s) 32, 144
BseLI CCNNNNNNNGG 3 cut(s) 114, 650, 707
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 2 cut(s) 435, 591
BseRI GAGGAG 1 cut(s) 461
BseSI GKGCMC 1 cut(s) 378
BseXI GCAGC 5 cut(s) 20, 158, 319, 766, 1081
BsgI GTGCAG 1 cut(s) 134
Bsh1236I CGCG 3 cut(s) 76, 130, 190
BshFI GGCC 1 cut(s) 133
BshVI ATCGAT 1 cut(s) 974
BsiHKAI GWGCWC 1 cut(s) 378
BsiSI CCGG 2 cut(s) 178, 804
BslI CCNNNNNNNGG 3 cut(s) 114, 650, 707
BsmAI GTCTC 1 cut(s) 1145
BsnI GGCC 1 cut(s) 133
Bso31I GGTCTC 1 cut(s) 1145
Bsp119I TTCGAA 1 cut(s) 859
Bsp1286I GDGCHC 1 cut(s) 378
Bsp1407I TGTACA 1 cut(s) 1042
Bsp143I GATC 6 cut(s) 39, 182, 337, 800, 946, 1131
Bsp19I CCATGG 1 cut(s) 1154
BspANI GGCC 1 cut(s) 133
BspCNI CTCAG 2 cut(s) 436, 590
BspDI ATCGAT 1 cut(s) 974
BspFNI CGCG 3 cut(s) 76, 130, 190
BspLI GGNNCC 1 cut(s) 184
BspMAI CTGCAG 1 cut(s) 337
BspOI GCTAGC 1 cut(s) 443
BspPI GGATC 4 cut(s) 34, 177, 190, 795
BspQI GCTCTTC 1 cut(s) 760
BspT104I TTCGAA 1 cut(s) 859
BspTNI GGTCTC 1 cut(s) 1145
BsrDI GCAATG 1 cut(s) 1200
BsrGI TGTACA 1 cut(s) 1042
BssECI CCNNGG 7 cut(s) 88, 113, 134, 178, 193, 649, 1154
BssMI GATC 6 cut(s) 39, 182, 337, 800, 946, 1131
BssNI GRCGYC 1 cut(s) 982
BssT1I CCWWGG 4 cut(s) 88, 113, 649, 1154
Bst2UI CCWGG 2 cut(s) 136, 194
Bst4CI ACNGT 1 cut(s) 691
Bst6I CTCTTC 4 cut(s) 400, 760, 821, 1116
BstACI GRCGYC 1 cut(s) 982
BstAPI GCANNNNNTGC 3 cut(s) 533, 905, 1091
BstAUI TGTACA 1 cut(s) 1042
BstBAI YACGTR 1 cut(s) 905
BstBI TTCGAA 1 cut(s) 859
BstC8I GCNNGC 2 cut(s) 80, 441
BstDEI CTNAG 2 cut(s) 444, 577
BstDSI CCRYGG 1 cut(s) 1154
BstENI CCTNNNNNAGG 1 cut(s) 648
BstF5I GGATG 2 cut(s) 32, 144
BstFNI CGCG 3 cut(s) 76, 130, 190
BstHHI GCGC 2 cut(s) 78, 192
BstKTI GATC 6 cut(s) 42, 185, 340, 803, 949, 1134
BstMAI GTCTC 1 cut(s) 1145
BstMBI GATC 6 cut(s) 39, 182, 337, 800, 946, 1131
BstNI CCWGG 2 cut(s) 136, 194
BstNSI RCATGY 1 cut(s) 1049
BstSCI CCNGG 4 cut(s) 134, 177, 192, 803
BstSFI CTRYAG 1 cut(s) 333
BstSLI GKGCMC 1 cut(s) 378
BstUI CGCG 3 cut(s) 76, 130, 190
BstV1I GCAGC 5 cut(s) 20, 158, 319, 766, 1081
BstV2I GAAGAC 1 cut(s) 740
BstX2I RGATCY 2 cut(s) 182, 800
BstYI RGATCY 2 cut(s) 182, 800
Bsu15I ATCGAT 1 cut(s) 974
Bsu36I CCTNAGG 1 cut(s) 577
BsuRI GGCC 1 cut(s) 133
BsuTUI ATCGAT 1 cut(s) 974
BtgI CCRYGG 1 cut(s) 1154
BtgZI GCGATG 1 cut(s) 1142
BtsCI GGATG 2 cut(s) 32, 144
BtsI GCAGTG 2 cut(s) 316, 388
BtsIMutI CAGTG 2 cut(s) 316, 388
Cac8I GCNNGC 2 cut(s) 80, 441
CaiI CAGNNNCTG 1 cut(s) 199
CfoI GCGC 2 cut(s) 78, 192
Cfr13I GGNCC 1 cut(s) 132
ClaI ATCGAT 1 cut(s) 974
CseI GACGC 2 cut(s) 136, 905
Csp6I GTAC 3 cut(s) 550, 654, 1043
CviAII CATG 4 cut(s) 289, 989, 1046, 1155
CviQI GTAC 3 cut(s) 550, 654, 1043
DdeI CTNAG 2 cut(s) 444, 577
DpnI GATC 6 cut(s) 41, 184, 339, 802, 948, 1133
DpnII GATC 6 cut(s) 39, 182, 337, 800, 946, 1131
Eam1104I CTCTTC 4 cut(s) 400, 760, 821, 1116
EarI CTCTTC 4 cut(s) 400, 760, 821, 1116
EciI GGCGGA 2 cut(s) 74, 180
Eco130I CCWWGG 4 cut(s) 88, 113, 649, 1154
Eco31I GGTCTC 1 cut(s) 1145
Eco32I GATATC 1 cut(s) 232
Eco57I CTGAAG 2 cut(s) 221, 300
Eco81I CCTNAGG 1 cut(s) 577
EcoNI CCTNNNNNAGG 1 cut(s) 648
EcoRI GAATTC 1 cut(s) 1240
EcoRII CCWGG 2 cut(s) 134, 192
EcoRV GATATC 1 cut(s) 232
EcoT14I CCWWGG 4 cut(s) 88, 113, 649, 1154
EcoT22I ATGCAT 1 cut(s) 1087
ErhI CCWWGG 4 cut(s) 88, 113, 649, 1154
FaeI CATG 4 cut(s) 292, 992, 1049, 1158
FalI AAGNNNNNCTT 4 cut(s) 754, 786, 800, 832
FatI CATG 4 cut(s) 288, 988, 1045, 1154
FauI CCCGC 4 cut(s) 52, 74, 81, 787
FauNDI CATATG 2 cut(s) 928, 951
FbaI TGATCA 2 cut(s) 946, 1131
FokI GGATG 2 cut(s) 19, 151
FspBI CTAG 3 cut(s) 89, 399, 440
GlaI GCGC 2 cut(s) 77, 191
HaeIII GGCC 1 cut(s) 133
HapII CCGG 2 cut(s) 178, 804
HgaI GACGC 2 cut(s) 136, 905
HhaI GCGC 2 cut(s) 78, 192
Hin1I GRCGYC 1 cut(s) 982
Hin1II CATG 4 cut(s) 292, 992, 1049, 1158
Hin6I GCGC 2 cut(s) 76, 190
HinP1I GCGC 2 cut(s) 76, 190
HincII GTYRAC 3 cut(s) 25, 421, 986
HindII GTYRAC 3 cut(s) 25, 421, 986
HindIII AAGCTT 1 cut(s) 353
HinfI GANTC 3 cut(s) 156, 872, 976
HpaII CCGG 2 cut(s) 178, 804
HphI GGTGA 3 cut(s) 443, 593, 638
Hpy166II GTNNAC 4 cut(s) 25, 376, 421, 986
Hpy188I TCNGA 8 cut(s) 109, 319, 467, 478, 877, 999, 1136, 1246
Hpy188III TCNNGA 6 cut(s) 208, 272, 359, 399, 541, 758
Hpy8I GTNNAC 4 cut(s) 25, 376, 421, 986
Hpy99I CGWCG 4 cut(s) 130, 287, 921, 984
HpyAV CCTTC 4 cut(s) 108, 112, 196, 860
HpyCH4III ACNGT 1 cut(s) 691
HpyCH4IV ACGT 3 cut(s) 904, 982, 1162
HpyCH4V TGCA 9 cut(s) 8, 151, 335, 376, 527, 695, 908, 938, 1085
HpyF3I CTNAG 2 cut(s) 444, 577
HpySE526I ACGT 3 cut(s) 904, 982, 1162
Hsp92I GRCGYC 1 cut(s) 982
Hsp92II CATG 4 cut(s) 292, 992, 1049, 1158
HspAI GCGC 2 cut(s) 76, 190
Ksp22I TGATCA 2 cut(s) 946, 1131
Kzo9I GATC 6 cut(s) 39, 182, 337, 800, 946, 1131
LguI GCTCTTC 1 cut(s) 760
LmnI GCTCC 2 cut(s) 87, 735
Lsp1109I GCAGC 5 cut(s) 20, 158, 319, 766, 1081
LweI GCATC 4 cut(s) 41, 229, 820, 1094
MaeI CTAG 3 cut(s) 89, 399, 440
MaeII ACGT 3 cut(s) 904, 982, 1162
MaeIII GTNAC 2 cut(s) 389, 1015
MalI GATC 6 cut(s) 41, 184, 339, 802, 948, 1133
MboI GATC 6 cut(s) 39, 182, 337, 800, 946, 1131
MboII GAAGA 9 cut(s) 226, 387, 740, 777, 808, 845, 848, 1080, 1133
MflI RGATCY 2 cut(s) 182, 800
MhlI GDGCHC 1 cut(s) 378
MlyI GAGTC 1 cut(s) 866
Mph1103I ATGCAT 1 cut(s) 1087
MroXI GAANNNNTTC 2 cut(s) 558, 769
MseI TTAA 3 cut(s) 599, 867, 912
MslI CAYNNNNRTG 2 cut(s) 381, 1080
MspI CCGG 2 cut(s) 178, 804
MspR9I CCNGG 4 cut(s) 136, 179, 194, 805
MvaI CCWGG 2 cut(s) 136, 194
MvnI CGCG 3 cut(s) 76, 130, 190
NciI CCSGG 2 cut(s) 179, 805
NcoI CCATGG 1 cut(s) 1154
NdeI CATATG 2 cut(s) 928, 951
NdeII GATC 6 cut(s) 39, 182, 337, 800, 946, 1131
NheI GCTAGC 1 cut(s) 439
NlaIII CATG 4 cut(s) 292, 992, 1049, 1158
NlaIV GGNNCC 1 cut(s) 184
NsiI ATGCAT 1 cut(s) 1087
NspI RCATGY 1 cut(s) 1049
NspV TTCGAA 1 cut(s) 859
OliI CACNNNNGTG 1 cut(s) 381
PciI ACATGT 1 cut(s) 1045
PciSI GCTCTTC 1 cut(s) 760
PcsI WCGNNNNNNNCGW 1 cut(s) 270
PdmI GAANNNNTTC 2 cut(s) 558, 769
PfeI GAWTC 2 cut(s) 156, 976
PflMI CCANNNNNTGG 1 cut(s) 707
PfoI TCCNGGA 1 cut(s) 803
PleI GAGTC 1 cut(s) 866
PpsI GAGTC 1 cut(s) 866
Ppu21I YACGTR 1 cut(s) 905
PscI ACATGT 1 cut(s) 1045
PsiI TTATAA 1 cut(s) 686
Psp6I CCWGG 2 cut(s) 134, 192
PspGI CCWGG 2 cut(s) 134, 192
PspN4I GGNNCC 1 cut(s) 184
PspPI GGNCC 1 cut(s) 132
PstI CTGCAG 1 cut(s) 337
PstNI CAGNNNCTG 1 cut(s) 199
PsuI RGATCY 2 cut(s) 182, 800
RsaI GTAC 3 cut(s) 551, 655, 1044
RsaNI GTAC 3 cut(s) 550, 654, 1043
RseI CAYNNNNRTG 2 cut(s) 381, 1080
SapI GCTCTTC 1 cut(s) 760
SaqAI TTAA 3 cut(s) 599, 867, 912
Sau3AI GATC 6 cut(s) 39, 182, 337, 800, 946, 1131
Sau96I GGNCC 1 cut(s) 132
SchI GAGTC 1 cut(s) 866
ScrFI CCNGG 4 cut(s) 136, 179, 194, 805
SduI GDGCHC 1 cut(s) 378
SfaNI GCATC 4 cut(s) 41, 229, 820, 1094
SfcI CTRYAG 1 cut(s) 333
SfuI TTCGAA 1 cut(s) 859
SmiMI CAYNNNNRTG 2 cut(s) 381, 1080
SmlI CTYRAG 2 cut(s) 712, 774
SmoI CTYRAG 2 cut(s) 712, 774
SspI AATATT 1 cut(s) 1111
SspMI CTAG 3 cut(s) 89, 399, 440
StyD4I CCNGG 4 cut(s) 134, 177, 192, 803
StyI CCWWGG 4 cut(s) 88, 113, 649, 1154
TaaI ACNGT 1 cut(s) 691
TaiI ACGT 3 cut(s) 907, 985, 1165
TaqI TCGA 5 cut(s) 207, 237, 859, 974, 979
TatI WGTACW 1 cut(s) 1042
TauI GCSGC 8 cut(s) 133, 222, 225, 245, 248, 251, 254, 257
TfiI GAWTC 2 cut(s) 156, 976
Tru1I TTAA 3 cut(s) 599, 867, 912
Tru9I TTAA 3 cut(s) 599, 867, 912
TscAI CASTG 2 cut(s) 316, 388
TseI GCWGC 5 cut(s) 8, 171, 332, 779, 1094
TspDTI ATGAA 3 cut(s) 692, 1005, 1064
TspRI CASTG 2 cut(s) 316, 388
Van91I CCANNNNNTGG 1 cut(s) 707
VneI GTGCAC 1 cut(s) 374
XagI CCTNNNNNAGG 1 cut(s) 648
XapI RAATTY 5 cut(s) 489, 679, 887, 940, 1240
XbaI TCTAGA 1 cut(s) 398
XceI RCATGY 1 cut(s) 1049
XmaJI CCTAGG 1 cut(s) 88
XmnI GAANNNNTTC 2 cut(s) 558, 769
XspI CTAG 3 cut(s) 89, 399, 440
ZraI GACGTC 1 cut(s) 983
Zsp2I ATGCAT 1 cut(s) 1087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.