Rw7G010280

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
9567679 .. 9570117
2439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G010280.1

Sequence Viewer

Length: 2244 bp
ATGACAATGCAATTGCTAGTTCACATGACCATCCTGTTCTTATTGTGTTCTTGTATCACTGAGCTCGTATCAGGATCAAACCCACCACAAATACCAAATCCTGATTGCTCAGACCATTGCGGAAATGTTAGGATTCCATACCCTTTTGGAGTTGAATCATCTGAATCCAAAGGAGCTGGCTGTTACTTAGACGAAGGGTTTGCAATATACTGCTACCCGAATGAGACTGCCGTGTTGAGGCTCAAGGAACTAGAGGTGCAGGTGCTGAAAATTTCTATTGAAGACCGCACGATTCGTGTAAACAAGTCTGCTGCTAAGTACTGCCAGGGTGATGGTTATACTAGTCCGCAACCGCCAGATTTGTCCGGGACACCTTTCACTTACTCTCAGAGTCACAATACATTTGTTTTGGCGAGTTGCGACCTCCTGGCCGTGGTGTACAACTCATCTTACAACCCAGGCATCCTTGGTGGGTGCAGCTCAGTTTGTGGTGATGAGACTAATTCTAATAGTACAAACTATTCGGAGTGTAAGAATAGTACCAACTGTTGCCAGACTAACCTTCCCCCAAACCGGAAGACTTTGTATTTTGGCTTGCTTACCACAGCTGGAGACGATGTAGATTGCTCCGTTAATTACAGTTCACAGCGGCATAAACATGCATTTCTGGTTGACCAAGTTTGGTTTCAGAACTTTTCTAGTTCATGGGCTGGAAGAGTCGACAAAAAGGATTTGGAAAAGGTTCCTTTGGTGCTAGAATGGGCCATAAATGATTCATTCATACGGTTTAACGAATCTAATTATCCCTCTACTAATTCATCTATTTGCCAGAAGGTTTCGGCATACAAACAGAGCACGTTTATCTGTAGCTGCAGGGTAGGCTACGAAGGAAATCCCTATCTTGGGAACCATTTCTGTCAATATATTGATGAATGCACAGATCATGCTAAAAACCATTGTTCTGCCGGCTCAAAATGTGTCAAACATGGAGGGAGATACCGCTGTAAAAAAGTGAGCAAAGTCAAAATATATGTCCGAATAGGTCTTTCCGCTTGTTTTGATACATTGTTGCTACTTCTCGTTGGATTTTTGGGGTACAGAAAGTGGAAAAAATGGAGTGACCGTAACTACAGGCGAAAGAATTTCGAACGGCATGGGGGATTATTGTTGGAACAACAATTGTTGTCTGGTGATGTTAATGTTGAGAAAATCAAGGTGTTTGACTCGAAGGAGTTAGAGAAGTCCACAGACAATTACAATATGGATAGAATTCTCGGTCAGGGAGGTCAGGGTACCGTGTACAAAGGAATGTTAGCAGATGGAAGAATCGTTGCTGTGAAGAAGTCTAACATAGTTAATGAAGGCGAAGTTGGACAATTCATTAATGAAATTGTCATCCTTTCACAAGTTAGCCACAGAAATGTGGTTAAGCTATTAGGTTGCTGTTTAGAAACCAAAGTTCCACTCTTAGTTTATGAGTTCATACCCAATGGAACACTTTCTCACTATATTCAGCATCAAAATGAGGAGTTTCCTCTTACGTGGGAAGTACGCTTACGAGTTGCCATCGAAGTTGCAGGAGCTATTTCATACTTGCACTCATCAGCTTCCTCTCCCATTTACCATCGAGACATTAAGTCTTCAAACATACTCTTGGATGGTAAGTTTAGAGCTAAAGTTGCGGACTTTGGAACATCAAGATCAGTAGCCATAGACAAAACACATCGTACCATGACAAACGTACAAGGAACATTTGGTTATTTGGATCCAGAGTACTTCCAATCTAGCCAGTTTACAGATAAGAGTGACGTTTATAGTTTCGGAGTGGTTCTTGCTGAGCTCTTGACTGGGCGAAAACCAATTTTTCAGAGGACGCCACAAGAACCCACGAGTCTTGCAACTTATTTCCTCGAGTCAAAGGAGCACAGTCATCTTTCTGATATTCTTGATGCTCAAGTTGTGAAAGATGGTAGGAAAGAAGAGATTGTGGCAGTTGCCAACCTTGCAAAACGTTGCTTAAATTTGAATGGAAGGAGACGCCCTACTATGAAAGAAGTAGCCATGGAGCTGGAGGGAATTCAATTGTCAGTTAAAGGTCTGGGTCATGTTCAAGAAGAACTTGCAGAGGTTGGTTATGTTCCAACTCATGAAATAACAGAAGCTTGGGATACAAGATCTTATGAAGTTCAAGGTACAAGTCCATCATCCTATGTACAACCACTATTGTTTTCCAATACAATATAG

Protein Analysis

747

Amino Acids

83.58

Weight (kDa)

7.01

Isoelectric Point (pI)

31.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 36 - 101 1e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 419 - 686 3.1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 421 - 690 1.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 250
Acc36I ACCTGC 1 cut(s) 250
Acc65I GGTACC 1 cut(s) 1292
AccB1I GGYRCC 1 cut(s) 1292
AccI GTMKAC 1 cut(s) 720
AciI CCGC 8 cut(s) 120, 286, 347, 353, 649, 1000, 1050, 1682
AclI AACGTT 1 cut(s) 2011
AclWI GGATC 3 cut(s) 82, 1760, 1773
AcoI YGGCCR 1 cut(s) 429
AcsI RAATTY 5 cut(s) 270, 1141, 1269, 2020, 2076
AcyI GRCGYC 2 cut(s) 1874, 2038
AfiI CCNNNNNNNGG 5 cut(s) 237, 433, 573, 902, 903
AgsI TTSAA 7 cut(s) 155, 281, 1644, 2026, 2081, 2111, 2189
AhdI GACNNNNNGTC 1 cut(s) 1636
AhlI ACTAGT 1 cut(s) 341
AjnI CCWGG 3 cut(s) 324, 426, 457
AjuI GAANNNNNNNTTGG 4 cut(s) 669, 701, 1353, 1385
Alw21I GWGCWC 4 cut(s) 66, 857, 1842, 1926
Alw26I GTCTC 5 cut(s) 218, 491, 606, 1623, 2029
AlwI GGATC 3 cut(s) 82, 1760, 1773
AlwNI CAGNNNCTG 1 cut(s) 265
Ama87I CYCGRG 1 cut(s) 1910
AoxI GGCC 2 cut(s) 429, 762
ApeKI GCWGC 3 cut(s) 311, 477, 870
ApoI RAATTY 5 cut(s) 270, 1141, 1269, 2020, 2076
ArsI GACNNNNNNTTYG 4 cut(s) 182, 214, 1017, 1049
AseI ATTAAT 1 cut(s) 1383
Asp700I GAANNNNTTC 3 cut(s) 741, 911, 1498
Asp718I GGTACC 1 cut(s) 1292
AspS9I GGNCC 1 cut(s) 762
AsuC2I CCSGG 1 cut(s) 367
AsuHPI GGTGA 3 cut(s) 341, 503, 1202
AsuII TTCGAA 1 cut(s) 1146
AvaI CYCGRG 1 cut(s) 1910
BaeI ACNNNNGTAYC 2 cut(s) 988, 1021
BamHI GGATCC 1 cut(s) 1765
BanI GGYRCC 1 cut(s) 1292
BanII GRGCYC 2 cut(s) 66, 1842
BarI GAAGNNNNNNTAC 2 cut(s) 1539, 1571
BauI CACGAG 1 cut(s) 1888
BbsI GAAGAC 3 cut(s) 288, 584, 1632
Bbv12I GWGCWC 4 cut(s) 66, 857, 1842, 1926
BbvI GCAGC 3 cut(s) 298, 489, 857
BccI CCATC 8 cut(s) 38, 326, 1313, 1574, 1632, 1652, 1961, 2209
BceAI ACGGC 3 cut(s) 215, 416, 1166
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BciT130I CCWGG 3 cut(s) 326, 428, 459
BciVI GTATCC 1 cut(s) 2161
BcnI CCSGG 1 cut(s) 367
BcoDI GTCTC 5 cut(s) 218, 491, 606, 1623, 2029
BcuI ACTAGT 1 cut(s) 341
BfaI CTAG 6 cut(s) 17, 251, 342, 699, 755, 1785
BfmI CTRYAG 3 cut(s) 865, 871, 1129
BfuAI ACCTGC 1 cut(s) 250
BfuI GTATCC 1 cut(s) 2161
BglII AGATCT 1 cut(s) 2174
BisI GCNGC 4 cut(s) 312, 478, 650, 871
BlpI GCTNAGC 1 cut(s) 1836
BlsI GCNGC 4 cut(s) 313, 479, 651, 872
BmcAI AGTACT 2 cut(s) 320, 1775
Bme1390I CCNGG 4 cut(s) 326, 367, 428, 459
BmeRI GACNNNNNGTC 1 cut(s) 1636
BmeT110I CYCGRG 1 cut(s) 1910
BmgT120I GGNCC 1 cut(s) 762
BmiI GGNNCC 4 cut(s) 744, 908, 1294, 1767
BmrFI CCNGG 4 cut(s) 326, 367, 428, 459
BmrI ACTGGG 1 cut(s) 1857
BmsI GCATC 3 cut(s) 471, 1525, 1939
BmuI ACTGGG 1 cut(s) 1857
BpiI GAAGAC 3 cut(s) 288, 584, 1632
BpmI CTGGAG 2 cut(s) 630, 2090
Bpu1102I GCTNAGC 1 cut(s) 1836
Bpu14I TTCGAA 1 cut(s) 1146
BpuEI CTTGAG 2 cut(s) 227, 1938
BpuMI CCSGG 1 cut(s) 367
BsaAI YACGTR 1 cut(s) 1542
BsaHI GRCGYC 2 cut(s) 1874, 2038
BsaJI CCNNGG 5 cut(s) 325, 432, 457, 466, 2061
BsaWI WCCGGW 1 cut(s) 573
BsaXI ACNNNNNCTCC 4 cut(s) 603, 633, 1108, 1138
Bsc4I CCNNNNNNNGG 5 cut(s) 237, 433, 573, 902, 903
Bse118I RCCGGY 1 cut(s) 965
Bse1I ACTGG 2 cut(s) 1789, 1852
Bse3DI GCAATG 1 cut(s) 115
BseBI CCWGG 3 cut(s) 326, 428, 459
BseDI CCNNGG 5 cut(s) 325, 432, 457, 466, 2061
BseGI GGATG 5 cut(s) 30, 462, 1395, 1663, 2204
BseLI CCNNNNNNNGG 5 cut(s) 237, 433, 573, 902, 903
BseMI GCAATG 1 cut(s) 115
BseMII CTCAG 5 cut(s) 51, 123, 401, 495, 1827
BseNI ACTGG 2 cut(s) 1789, 1852
BseRI GAGGAG 1 cut(s) 1541
BseXI GCAGC 3 cut(s) 298, 489, 857
BsgI GTGCAG 2 cut(s) 278, 496
BshFI GGCC 2 cut(s) 431, 764
BshNI GGYRCC 1 cut(s) 1292
BsiHKAI GWGCWC 4 cut(s) 66, 857, 1842, 1926
BsiHKCI CYCGRG 1 cut(s) 1910
BsiSI CCGG 3 cut(s) 366, 574, 966
BslFI GGGAC 1 cut(s) 382
BslI CCNNNNNNNGG 5 cut(s) 237, 433, 573, 902, 903
BsmAI GTCTC 5 cut(s) 218, 491, 606, 1623, 2029
BsmBI CGTCTC 2 cut(s) 606, 2029
BsmFI GGGAC 1 cut(s) 382
BsmI GAATGC 1 cut(s) 938
BsnI GGCC 2 cut(s) 431, 764
BsoBI CYCGRG 1 cut(s) 1910
Bsp119I TTCGAA 1 cut(s) 1146
Bsp1286I GDGCHC 4 cut(s) 66, 857, 1842, 1926
Bsp1407I TGTACA 3 cut(s) 438, 1299, 2212
Bsp143I GATC 5 cut(s) 74, 940, 1700, 1765, 2174
Bsp1720I GCTNAGC 1 cut(s) 1836
Bsp19I CCATGG 1 cut(s) 2061
BspACI CCGC 8 cut(s) 120, 286, 347, 353, 649, 1000, 1050, 1682
BspANI GGCC 2 cut(s) 431, 764
BspCNI CTCAG 5 cut(s) 52, 122, 400, 494, 1828
BspHI TCATGA 1 cut(s) 2146
BspLI GGNNCC 4 cut(s) 744, 908, 1294, 1767
BspMAI CTGCAG 1 cut(s) 875
BspMI ACCTGC 1 cut(s) 250
BspPI GGATC 3 cut(s) 82, 1760, 1773
BspT104I TTCGAA 1 cut(s) 1146
BspT107I GGYRCC 1 cut(s) 1292
BsrDI GCAATG 1 cut(s) 115
BsrFI RCCGGY 1 cut(s) 965
BsrGI TGTACA 3 cut(s) 438, 1299, 2212
BsrI ACTGG 2 cut(s) 1789, 1852
BssAI RCCGGY 1 cut(s) 965
BssECI CCNNGG 5 cut(s) 325, 432, 457, 466, 2061
BssMI GATC 5 cut(s) 74, 940, 1700, 1765, 2174
BssNI GRCGYC 2 cut(s) 1874, 2038
BssSI CACGAG 1 cut(s) 1888
BssT1I CCWWGG 2 cut(s) 466, 2061
Bst2BI CACGAG 1 cut(s) 1888
Bst2UI CCWGG 3 cut(s) 326, 428, 459
Bst4CI ACNGT 6 cut(s) 548, 641, 786, 1124, 1297, 1928
Bst6I CTCTTC 2 cut(s) 709, 1974
BstACI GRCGYC 2 cut(s) 1874, 2038
BstAUI TGTACA 3 cut(s) 438, 1299, 2212
BstBAI YACGTR 1 cut(s) 1542
BstBI TTCGAA 1 cut(s) 1146
BstC8I GCNNGC 3 cut(s) 178, 596, 967
BstDEI CTNAG 8 cut(s) 60, 109, 187, 315, 387, 481, 1468, 1836
BstDSI CCRYGG 2 cut(s) 432, 2061
BstF5I GGATG 5 cut(s) 30, 462, 1395, 1663, 2204
BstKTI GATC 5 cut(s) 77, 943, 1703, 1768, 2177
BstMAI GTCTC 5 cut(s) 218, 491, 606, 1623, 2029
BstMBI GATC 5 cut(s) 74, 940, 1700, 1765, 2174
BstMWI GCNNNNNNNGC 3 cut(s) 879, 1679, 2003
BstNI CCWGG 3 cut(s) 326, 428, 459
BstNSI RCATGY 1 cut(s) 662
BstSCI CCNGG 4 cut(s) 324, 365, 426, 457
BstSFI CTRYAG 3 cut(s) 865, 871, 1129
BstV1I GCAGC 3 cut(s) 298, 489, 857
BstV2I GAAGAC 3 cut(s) 288, 584, 1632
BstX2I RGATCY 2 cut(s) 1765, 2174
BstXI CCANNNNNNTGG 2 cut(s) 332, 2068
BstYI RGATCY 2 cut(s) 1765, 2174
BsuI GTATCC 1 cut(s) 2161
BsuRI GGCC 2 cut(s) 431, 764
BtgI CCRYGG 2 cut(s) 432, 2061
BtsCI GGATG 5 cut(s) 30, 462, 1395, 1663, 2204
BtsIMutI CAGTG 1 cut(s) 57
BveI ACCTGC 1 cut(s) 250
Cac8I GCNNGC 3 cut(s) 178, 596, 967
CaiI CAGNNNCTG 1 cut(s) 265
CciI TCATGA 1 cut(s) 2146
Cfr10I RCCGGY 1 cut(s) 965
Cfr13I GGNCC 1 cut(s) 762
CseI GACGC 2 cut(s) 1882, 2046
CspCI CAANNNNNGTGG 2 cut(s) 1876, 1911
DdeI CTNAG 8 cut(s) 60, 109, 187, 315, 387, 481, 1468, 1836
DpnI GATC 5 cut(s) 76, 942, 1702, 1767, 2176
DpnII GATC 5 cut(s) 74, 940, 1700, 1765, 2174
DriI GACNNNNNGTC 1 cut(s) 1636
EaeI YGGCCR 1 cut(s) 429
Eam1104I CTCTTC 2 cut(s) 709, 1974
Eam1105I GACNNNNNGTC 1 cut(s) 1636
EarI CTCTTC 2 cut(s) 709, 1974
Ecl136II GAGCTC 2 cut(s) 64, 1840
Eco130I CCWWGG 2 cut(s) 466, 2061
Eco24I GRGCYC 2 cut(s) 66, 1842
Eco53kI GAGCTC 2 cut(s) 64, 1840
Eco88I CYCGRG 1 cut(s) 1910
EcoICRI GAGCTC 2 cut(s) 64, 1840
EcoRI GAATTC 2 cut(s) 1269, 2076
EcoRII CCWGG 3 cut(s) 324, 426, 457
EcoT14I CCWWGG 2 cut(s) 466, 2061
EcoT22I ATGCAT 1 cut(s) 664
EcoT38I GRGCYC 2 cut(s) 66, 1842
ErhI CCWWGG 2 cut(s) 466, 2061
Esp3I CGTCTC 2 cut(s) 606, 2029
FalI AAGNNNNNCTT 2 cut(s) 2103, 2135
FaqI GGGAC 1 cut(s) 382
FblI GTMKAC 1 cut(s) 720
Fnu4HI GCNGC 4 cut(s) 312, 478, 650, 871
FokI GGATG 5 cut(s) 17, 449, 1382, 1670, 2191
FriOI GRGCYC 2 cut(s) 66, 1842
Fsp4HI GCNGC 4 cut(s) 312, 478, 650, 871
FspBI CTAG 6 cut(s) 17, 251, 342, 699, 755, 1785
GluI GCNGC 4 cut(s) 312, 478, 650, 871
GsuI CTGGAG 2 cut(s) 630, 2090
HaeIII GGCC 2 cut(s) 431, 764
HapII CCGG 3 cut(s) 366, 574, 966
HgaI GACGC 2 cut(s) 1882, 2046
Hin1I GRCGYC 2 cut(s) 1874, 2038
HincII GTYRAC 2 cut(s) 673, 721
HindII GTYRAC 2 cut(s) 673, 721
HindIII AAGCTT 1 cut(s) 2160
HpaII CCGG 3 cut(s) 366, 574, 966
HphI GGTGA 3 cut(s) 341, 503, 1202
Hpy166II GTNNAC 9 cut(s) 22, 301, 439, 644, 673, 721, 1245, 1300, 1794
Hpy188I TCNGA 9 cut(s) 112, 163, 390, 526, 690, 1037, 1823, 1869, 1939
Hpy188III TCNNGA 9 cut(s) 72, 101, 1628, 1698, 1769, 1843, 1946, 2111, 2147
Hpy8I GTNNAC 9 cut(s) 22, 301, 439, 644, 673, 721, 1245, 1300, 1794
HpyAV CCTTC 7 cut(s) 188, 572, 826, 881, 1222, 1355, 2025
HpyCH4III ACNGT 6 cut(s) 548, 641, 786, 1124, 1297, 1928
HpyCH4IV ACGT 5 cut(s) 857, 1541, 1740, 1809, 2011
HpyF10VI GCNNNNNNNGC 3 cut(s) 879, 1679, 2003
HpyF3I CTNAG 8 cut(s) 60, 109, 187, 315, 387, 481, 1468, 1836
HpySE526I ACGT 5 cut(s) 857, 1541, 1740, 1809, 2011
Hsp92I GRCGYC 2 cut(s) 1874, 2038
KpnI GGTACC 1 cut(s) 1296
KroI GCCGGC 1 cut(s) 965
KroNI GCCGGC 1 cut(s) 967
Kzo9I GATC 5 cut(s) 74, 940, 1700, 1765, 2174
LmnI GCTCC 5 cut(s) 173, 632, 1580, 1921, 2065
Lsp1109I GCAGC 3 cut(s) 298, 489, 857
LweI GCATC 3 cut(s) 471, 1525, 1939
MaeI CTAG 6 cut(s) 17, 251, 342, 699, 755, 1785
MaeII ACGT 5 cut(s) 857, 1541, 1740, 1809, 2011
MaeIII GTNAC 5 cut(s) 182, 392, 1118, 1124, 1805
MalI GATC 5 cut(s) 76, 942, 1702, 1767, 2176
MboI GATC 5 cut(s) 74, 940, 1700, 1765, 2174
MboII GAAGA 8 cut(s) 293, 589, 726, 1335, 1351, 1632, 1991, 2126
MfeI CAATTG 3 cut(s) 11, 1178, 2081
MflI RGATCY 2 cut(s) 1765, 2174
MhlI GDGCHC 4 cut(s) 66, 857, 1842, 1926
MlyI GAGTC 5 cut(s) 400, 726, 1217, 1900, 1922
MmeI TCCRAC 4 cut(s) 1063, 1149, 1351, 2165
Mph1103I ATGCAT 1 cut(s) 664
MroNI GCCGGC 1 cut(s) 965
MroXI GAANNNNTTC 3 cut(s) 741, 911, 1498
MseI TTAA 9 cut(s) 633, 789, 1197, 1356, 1383, 1428, 1635, 2018, 2091
MslI CAYNNNNRTG 3 cut(s) 657, 1419, 1521
MspA1I CMGCKG 3 cut(s) 608, 649, 1002
MspI CCGG 3 cut(s) 366, 574, 966
MspR9I CCNGG 4 cut(s) 326, 367, 428, 459
MunI CAATTG 3 cut(s) 11, 1178, 2081
Mva1269I GAATGC 1 cut(s) 938
MvaI CCWGG 3 cut(s) 326, 428, 459
MwoI GCNNNNNNNGC 3 cut(s) 879, 1679, 2003
NaeI GCCGGC 1 cut(s) 967
NciI CCSGG 1 cut(s) 367
NcoI CCATGG 1 cut(s) 2061
NdeII GATC 5 cut(s) 74, 940, 1700, 1765, 2174
NgoMIV GCCGGC 1 cut(s) 965
NlaIV GGNNCC 4 cut(s) 744, 908, 1294, 1767
NmuCI GTSAC 3 cut(s) 392, 1118, 1805
NsiI ATGCAT 1 cut(s) 664
NspI RCATGY 1 cut(s) 662
NspV TTCGAA 1 cut(s) 1146
PaeR7I CTCGAG 1 cut(s) 1910
PagI TCATGA 1 cut(s) 2146
PaqCI CACCTGC 1 cut(s) 250
PctI GAATGC 1 cut(s) 938
PdiI GCCGGC 1 cut(s) 967
PdmI GAANNNNTTC 3 cut(s) 741, 911, 1498
PfeI GAWTC 7 cut(s) 133, 155, 164, 292, 773, 794, 1326
PfoI TCCNGGA 1 cut(s) 365
PkrI GCNGC 4 cut(s) 313, 479, 651, 872
PleI GAGTC 5 cut(s) 399, 725, 1217, 1899, 1921
PpsI GAGTC 5 cut(s) 399, 725, 1217, 1899, 1921
Ppu21I YACGTR 1 cut(s) 1542
PshBI ATTAAT 1 cut(s) 1383
Psp124BI GAGCTC 2 cut(s) 66, 1842
Psp1406I AACGTT 1 cut(s) 2011
Psp6I CCWGG 3 cut(s) 324, 426, 457
PspGI CCWGG 3 cut(s) 324, 426, 457
PspN4I GGNNCC 4 cut(s) 744, 908, 1294, 1767
PspPI GGNCC 1 cut(s) 762
PspXI VCTCGAGB 1 cut(s) 1910
PstI CTGCAG 1 cut(s) 875
PstNI CAGNNNCTG 1 cut(s) 265
PsuI RGATCY 2 cut(s) 1765, 2174
PvuII CAGCTG 1 cut(s) 608
RseI CAYNNNNRTG 3 cut(s) 657, 1419, 1521
SacI GAGCTC 2 cut(s) 66, 1842
SalI GTCGAC 1 cut(s) 719
SaqAI TTAA 9 cut(s) 633, 789, 1197, 1356, 1383, 1428, 1635, 2018, 2091
SatI GCNGC 4 cut(s) 312, 478, 650, 871
Sau3AI GATC 5 cut(s) 74, 940, 1700, 1765, 2174
Sau96I GGNCC 1 cut(s) 762
ScaI AGTACT 2 cut(s) 320, 1775
SchI GAGTC 5 cut(s) 400, 726, 1217, 1900, 1922
ScrFI CCNGG 4 cut(s) 326, 367, 428, 459
SduI GDGCHC 4 cut(s) 66, 857, 1842, 1926
SfaNI GCATC 3 cut(s) 471, 1525, 1939
SfcI CTRYAG 3 cut(s) 865, 871, 1129
Sfr274I CTCGAG 1 cut(s) 1910
SfuI TTCGAA 1 cut(s) 1146
SlaI CTCGAG 1 cut(s) 1910
SmiMI CAYNNNNRTG 3 cut(s) 657, 1419, 1521
SmlI CTYRAG 3 cut(s) 242, 1910, 1953
SmoI CTYRAG 3 cut(s) 242, 1910, 1953
SpeI ACTAGT 1 cut(s) 341
SsiI CCGC 8 cut(s) 120, 286, 347, 353, 649, 1000, 1050, 1682
SspMI CTAG 6 cut(s) 17, 251, 342, 699, 755, 1785
SstI GAGCTC 2 cut(s) 66, 1842
StyD4I CCNGG 4 cut(s) 324, 365, 426, 457
StyI CCWWGG 2 cut(s) 466, 2061
TaaI ACNGT 6 cut(s) 548, 641, 786, 1124, 1297, 1928
TaiI ACGT 5 cut(s) 860, 1544, 1743, 1812, 2014
TaqI TCGA 6 cut(s) 720, 1146, 1226, 1569, 1627, 1911
TaqII GACCGA 1 cut(s) 1265
TatI WGTACW 6 cut(s) 318, 438, 512, 1299, 1773, 2212
TauI GCSGC 1 cut(s) 652
TfiI GAWTC 7 cut(s) 133, 155, 164, 292, 773, 794, 1326
Tru1I TTAA 9 cut(s) 633, 789, 1197, 1356, 1383, 1428, 1635, 2018, 2091
Tru9I TTAA 9 cut(s) 633, 789, 1197, 1356, 1383, 1428, 1635, 2018, 2091
TscAI CASTG 1 cut(s) 64
TseFI GTSAC 3 cut(s) 392, 1118, 1805
TseI GCWGC 3 cut(s) 311, 477, 870
Tsp45I GTSAC 3 cut(s) 392, 1118, 1805
TspGWI ACGGA 1 cut(s) 619
TspRI CASTG 1 cut(s) 64
VspI ATTAAT 1 cut(s) 1383
XapI RAATTY 5 cut(s) 270, 1141, 1269, 2020, 2076
XceI RCATGY 1 cut(s) 662
XhoI CTCGAG 1 cut(s) 1910
XmiI GTMKAC 1 cut(s) 720
XmnI GAANNNNTTC 3 cut(s) 741, 911, 1498
XspI CTAG 6 cut(s) 17, 251, 342, 699, 755, 1785
ZrmI AGTACT 2 cut(s) 320, 1775
Zsp2I ATGCAT 1 cut(s) 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.