Rmu_sc0000837.1_g000041

wall-associated receptor kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000837.1
OG0000052
Physical Location & Seq
Forward (+)
174038 .. 177201
3164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000837.1_g000041.1.cds

Sequence Viewer

Length: 2250 bp
atgtctagatcccagttccagtttcttgtgctgcactttactagtctgttcatcttgtggcgtgtgaacagcagtgcaataccagcggcagcatcaccggtgccactgccccccgcagacttgaatcactcgattgcaaagcctcactgcccgtcgcattgtggaagcattgcaatcccatatccttttggaattggagaaggctgttacttaactggaagtatatcccctttctacaagaataactcgttccagataatctgtgacagctcaaccggccctcccaaacctatcttgaccagcacgagtcttgaggtgctgaatatctctattgaaggcacactcctggtcagaagccccatcaccttcttaaattgcactaacaagacgaacaaccgccagaacccagacctgaggggaaccaatttctggtactcccagaagaacaggttcacttcaacgagctgtgggggaattgccctaatgacgaggcgatctttatatagttggtcgacaactcttggtggctgcttgtccatttgtgacgagtactccattagtaaccctgtattacagaataatagctgcggtggtatcagctgctgccagaccacccttcctcaatatctacggtacttcaatgctagttttggagaagtaataaacggtagcagagctgaggtatgcaagtatgcattccttgtagaccaaagttggtttactactggaaatatatcgctcattcgtgatatggactacgtccctgtggagctggaatggaggttaagatcttatatgaatatctcgatatatgggaccgacaattggactgactctaacaatagcacatatatcagccttgatggacgacgcttctgctcaaaaggctatcaaggaaatccttatcttcttcatggatgccatgatatcaatgaatgtgacgatcgaccatgtggtagttacgggatctgtatcaattatcctggaggctttacgtgtgtcgactttcctgatcctccaccgagaaggccggtaaagctgggcgttatagttacaagcagtgtttttggagttctacttacactcacttgtggatggtggtcgcacaaagtcataaaaaaaaggaagaacatcaaacgcaagaagaagttcttcaaacaaaatggtggcttcttgttggagcaacaattatcatcaggtgaagttaatgttgagaaaattaagctgtttaattccaaggagctagagaaagccacagaccattttaatgtagacaggattcttggtcaaggaggccaaggtactgtttacaaaggaatgctggcagatggaagaattgttgctgtgaagaagtctaaacaagttcatggtggagaagttagacaattcatcaatgaaattgtcattctttcccaaattatccacaggaatgtggtcaaacttttgggttgttgcttagagacagaagttccccttttggtttatgaattcatcgtcaatggaacactttctgaatatattcatcagcagaatgaagagtttccccttacatgggaaataagactacgagttgccatcgaagtagcaggagctctttcctacttgcattctgcagctgcttttcccatttaccatcgagatatcaagtcatctaacatactcctagatgagaaatacagagcaaaagtagcagactttgggacttctagatctgtttcgattgaccaaacacaccttaccacactagtacatggaacatttggttatttggacccagagtacttacaatctagccaatttacagacaaaagtgatgtttatagctttggtgtggtacttgttgagctcttaactggacaaaaaccagtttcttcacaaaggtcccaagaaggaagaagcctagcaacatatttccttctttctatggaccaaaattgcctgattaatgttctcgatcctcaagttacgaaatatgctgggaaggaagagattactgcagtcgctaaccttgcaaaaagatgcttaaatttgaatggaaagagacgacctactatgaaagaagtagtatttgagttggaggcaattcaattgtcagttaaggcctctaatcatgttcatcaaaatttggcagatgttgcatatatccgaaatcatgaaataaccgaggcttgggatattgtttctacatcaacagggccttgtaacgatggtggtagttcttcatttgatgctcaaccattgttgacttag

Protein Analysis

749

Amino Acids

83.49

Weight (kDa)

8.29

Isoelectric Point (pI)

44.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 100
AccB7I CCANNNNNTGG 1 cut(s) 429
AccI GTMKAC 4 cut(s) 512, 705, 1002, 1272
AciI CCGC 4 cut(s) 86, 114, 397, 588
AclWI GGATC 4 cut(s) 3, 974, 1007, 1949
AcsI RAATTY 3 cut(s) 1487, 2026, 2122
AfaI GTAC 7 cut(s) 434, 551, 635, 1303, 1749, 1781, 1836
AfiI CCNNNNNNNGG 5 cut(s) 429, 825, 1551, 1552, 2169
AflIII ACRYGT 1 cut(s) 995
AgeI ACCGGT 1 cut(s) 97
AgsI TTSAA 7 cut(s) 124, 335, 459, 640, 1156, 2032, 2087
AhlI ACTAGT 2 cut(s) 41, 1744
AjnI CCWGG 2 cut(s) 345, 982
Alw21I GWGCWC 2 cut(s) 1594, 1848
Alw26I GTCTC 2 cut(s) 1454, 2035
AlwI GGATC 4 cut(s) 3, 974, 1007, 1949
AlwNI CAGNNNCTG 1 cut(s) 603
AoxI GGCC 5 cut(s) 277, 1028, 1294, 2100, 2195
ApeKI GCWGC 8 cut(s) 31, 89, 528, 585, 600, 603, 1613, 1616
ApoI RAATTY 3 cut(s) 1487, 2026, 2122
AseI ATTAAT 1 cut(s) 1944
AsiGI ACCGGT 1 cut(s) 97
Asp700I GAANNNNTTC 6 cut(s) 449, 1148, 1151, 1507, 1518, 1539
AspS9I GGNCC 6 cut(s) 278, 816, 1771, 1881, 1927, 2195
AsuHPI GGTGA 3 cut(s) 87, 355, 1211
AvaII GGWCC 4 cut(s) 816, 1771, 1881, 1927
AxyI CCTNAGG 1 cut(s) 413
BanI GGYRCC 1 cut(s) 100
BanII GRGCYC 2 cut(s) 1594, 1848
BauI CACGAG 1 cut(s) 304
Bbv12I GWGCWC 2 cut(s) 1594, 1848
BbvCI CCTCAGC 1 cut(s) 678
BbvI GCAGC 8 cut(s) 18, 101, 515, 572, 587, 590, 1603, 1625
BccI CCATC 7 cut(s) 368, 857, 1089, 1322, 1583, 1641, 2201
BcgI CGANNNNNNTGC 2 cut(s) 858, 892
BciT130I CCWGG 2 cut(s) 347, 984
BcoDI GTCTC 2 cut(s) 1454, 2035
BcuI ACTAGT 2 cut(s) 41, 1744
BfaI CTAG 9 cut(s) 6, 42, 645, 1244, 1664, 1707, 1745, 1791, 1901
BfmI CTRYAG 2 cut(s) 1611, 1995
BglII AGATCT 2 cut(s) 788, 1709
BisI GCNGC 9 cut(s) 32, 87, 90, 529, 586, 601, 604, 1614, 1617
BlsI GCNGC 9 cut(s) 33, 88, 91, 530, 587, 602, 605, 1615, 1618
BmcAI AGTACT 2 cut(s) 551, 1781
Bme1390I CCNGG 2 cut(s) 347, 984
Bme18I GGWCC 4 cut(s) 816, 1771, 1881, 1927
BmgT120I GGNCC 6 cut(s) 278, 816, 1771, 1881, 1927, 2195
BmiI GGNNCC 5 cut(s) 102, 421, 817, 1773, 1883
BmrFI CCNGG 2 cut(s) 347, 984
BmrI ACTGGG 1 cut(s) 7
BmsI GCATC 4 cut(s) 101, 908, 2009, 2218
BmuI ACTGGG 1 cut(s) 7
BpmI CTGGAG 1 cut(s) 1005
Bpu10I CCTNAGC 1 cut(s) 678
BpuEI CTTGAG 2 cut(s) 332, 1944
BsaAI YACGTR 1 cut(s) 996
BsaBI GATNNNNATC 1 cut(s) 971
BsaJI CCNNGG 3 cut(s) 1236, 1297, 2163
BsaWI WCCGGW 1 cut(s) 97
BsaXI ACNNNNNCTCC 4 cut(s) 265, 295, 536, 566
Bsc4I CCNNNNNNNGG 5 cut(s) 429, 825, 1551, 1552, 2169
Bse118I RCCGGY 3 cut(s) 97, 275, 1030
Bse1I ACTGG 6 cut(s) 13, 19, 220, 730, 1858, 1865
Bse21I CCTNAGG 1 cut(s) 413
Bse3DI GCAATG 1 cut(s) 168
Bse8I GATNNNNATC 1 cut(s) 971
BseBI CCWGG 2 cut(s) 347, 984
BseDI CCNNGG 3 cut(s) 1236, 1297, 2163
BseGI GGATG 2 cut(s) 923, 1100
BseJI GATNNNNATC 1 cut(s) 971
BseLI CCNNNNNNNGG 5 cut(s) 429, 825, 1551, 1552, 2169
BseMI GCAATG 1 cut(s) 168
BseMII CTCAG 2 cut(s) 404, 669
BseNI ACTGG 6 cut(s) 13, 19, 220, 730, 1858, 1865
BseXI GCAGC 8 cut(s) 18, 101, 515, 572, 587, 590, 1603, 1625
BseYI CCCAGC 2 cut(s) 1039, 1976
BsgI GTGCAG 1 cut(s) 17
Bsh1285I CGRYCG 1 cut(s) 946
BshFI GGCC 5 cut(s) 279, 1030, 1296, 2102, 2197
BshNI GGYRCC 1 cut(s) 100
BshTI ACCGGT 1 cut(s) 97
BsiEI CGRYCG 1 cut(s) 946
BsiHKAI GWGCWC 2 cut(s) 1594, 1848
BsiSI CCGG 3 cut(s) 98, 276, 1031
BslFI GGGAC 4 cut(s) 746, 829, 1714, 1867
BslI CCNNNNNNNGG 5 cut(s) 429, 825, 1551, 1552, 2169
BsmAI GTCTC 2 cut(s) 1454, 2035
BsmBI CGTCTC 1 cut(s) 2035
BsmFI GGGAC 4 cut(s) 746, 829, 1714, 1867
BsmI GAATGC 3 cut(s) 695, 1323, 1606
BsnI GGCC 5 cut(s) 279, 1030, 1296, 2102, 2197
Bsp1286I GDGCHC 2 cut(s) 1594, 1848
Bsp143I GATC 8 cut(s) 8, 494, 788, 943, 966, 1012, 1709, 1954
BspACI CCGC 4 cut(s) 86, 114, 397, 588
BspANI GGCC 5 cut(s) 279, 1030, 1296, 2102, 2197
BspCNI CTCAG 2 cut(s) 405, 670
BspHI TCATGA 1 cut(s) 2152
BspLI GGNNCC 5 cut(s) 102, 421, 817, 1773, 1883
BspMAI CTGCAG 2 cut(s) 1615, 1999
BspPI GGATC 4 cut(s) 3, 974, 1007, 1949
BspT107I GGYRCC 1 cut(s) 100
BsrDI GCAATG 1 cut(s) 168
BsrFI RCCGGY 3 cut(s) 97, 275, 1030
BsrI ACTGG 6 cut(s) 13, 19, 220, 730, 1858, 1865
BssAI RCCGGY 3 cut(s) 97, 275, 1030
BssECI CCNNGG 3 cut(s) 1236, 1297, 2163
BssMI GATC 8 cut(s) 8, 494, 788, 943, 966, 1012, 1709, 1954
BssSI CACGAG 1 cut(s) 304
BssT1I CCWWGG 2 cut(s) 1236, 1297
Bst2BI CACGAG 1 cut(s) 304
Bst2UI CCWGG 2 cut(s) 347, 984
Bst4CI ACNGT 3 cut(s) 633, 668, 1306
Bst6I CTCTTC 2 cut(s) 1530, 1980
BstAPI GCANNNNNTGC 1 cut(s) 2135
BstBAI YACGTR 1 cut(s) 996
BstC8I GCNNGC 1 cut(s) 1323
BstDEI CTNAG 4 cut(s) 413, 678, 1456, 2247
BstF5I GGATG 2 cut(s) 923, 1100
BstKTI GATC 8 cut(s) 11, 497, 791, 946, 969, 1015, 1712, 1957
BstMAI GTCTC 2 cut(s) 1454, 2035
BstMBI GATC 8 cut(s) 8, 494, 788, 943, 966, 1012, 1709, 1954
BstMCI CGRYCG 1 cut(s) 946
BstMWI GCNNNNNNNGC 7 cut(s) 83, 276, 885, 1036, 1688, 2009, 2135
BstNI CCWGG 2 cut(s) 347, 984
BstSCI CCNGG 2 cut(s) 345, 982
BstSFI CTRYAG 2 cut(s) 1611, 1995
BstV1I GCAGC 8 cut(s) 18, 101, 515, 572, 587, 590, 1603, 1625
BstX2I RGATCY 4 cut(s) 8, 788, 966, 1709
BstYI RGATCY 4 cut(s) 8, 788, 966, 1709
Bsu36I CCTNAGG 1 cut(s) 413
BsuRI GGCC 5 cut(s) 279, 1030, 1296, 2102, 2197
BtsCI GGATG 2 cut(s) 923, 1100
BtsI GCAGTG 4 cut(s) 79, 104, 145, 1066
BtsIMutI CAGTG 4 cut(s) 79, 104, 145, 1066
Cac8I GCNNGC 1 cut(s) 1323
CaiI CAGNNNCTG 1 cut(s) 603
CciI TCATGA 1 cut(s) 2152
Cfr10I RCCGGY 3 cut(s) 97, 275, 1030
Cfr13I GGNCC 6 cut(s) 278, 816, 1771, 1881, 1927, 2195
CseI GACGC 1 cut(s) 879
Csp6I GTAC 7 cut(s) 433, 550, 634, 1302, 1748, 1780, 1835
CspAI ACCGGT 1 cut(s) 97
CviAII CATG 8 cut(s) 914, 923, 951, 1367, 1551, 1751, 2111, 2153
CviQI GTAC 7 cut(s) 433, 550, 634, 1302, 1748, 1780, 1835
DdeI CTNAG 4 cut(s) 413, 678, 1456, 2247
DpnI GATC 8 cut(s) 10, 496, 790, 945, 968, 1014, 1711, 1956
DpnII GATC 8 cut(s) 8, 494, 788, 943, 966, 1012, 1709, 1954
Eam1104I CTCTTC 2 cut(s) 1530, 1980
EarI CTCTTC 2 cut(s) 1530, 1980
Ecl136II GAGCTC 2 cut(s) 1592, 1846
Eco130I CCWWGG 2 cut(s) 1236, 1297
Eco147I AGGCCT 1 cut(s) 2102
Eco24I GRGCYC 2 cut(s) 1594, 1848
Eco32I GATATC 2 cut(s) 928, 1642
Eco47I GGWCC 4 cut(s) 816, 1771, 1881, 1927
Eco53kI GAGCTC 2 cut(s) 1592, 1846
Eco81I CCTNAGG 1 cut(s) 413
EcoICRI GAGCTC 2 cut(s) 1592, 1846
EcoO109I RGGNCCY 2 cut(s) 1881, 2195
EcoRI GAATTC 1 cut(s) 1487
EcoRII CCWGG 2 cut(s) 345, 982
EcoRV GATATC 2 cut(s) 928, 1642
EcoT14I CCWWGG 2 cut(s) 1236, 1297
EcoT22I ATGCAT 1 cut(s) 697
EcoT38I GRGCYC 2 cut(s) 1594, 1848
ErhI CCWWGG 2 cut(s) 1236, 1297
Esp3I CGTCTC 1 cut(s) 2035
FaeI CATG 8 cut(s) 917, 926, 954, 1370, 1554, 1754, 2114, 2156
FalI AAGNNNNNCTT 4 cut(s) 1136, 1168, 1458, 1490
FaqI GGGAC 4 cut(s) 746, 829, 1714, 1867
FatI CATG 8 cut(s) 913, 922, 950, 1366, 1550, 1750, 2110, 2152
FauI CCCGC 1 cut(s) 121
FblI GTMKAC 4 cut(s) 512, 705, 1002, 1272
Fnu4HI GCNGC 9 cut(s) 32, 87, 90, 529, 586, 601, 604, 1614, 1617
FokI GGATG 2 cut(s) 930, 1107
FriOI GRGCYC 2 cut(s) 1594, 1848
Fsp4HI GCNGC 9 cut(s) 32, 87, 90, 529, 586, 601, 604, 1614, 1617
FspBI CTAG 9 cut(s) 6, 42, 645, 1244, 1664, 1707, 1745, 1791, 1901
GluI GCNGC 9 cut(s) 32, 87, 90, 529, 586, 601, 604, 1614, 1617
GsaI CCCAGC 2 cut(s) 1043, 1980
GsuI CTGGAG 1 cut(s) 1005
HaeIII GGCC 5 cut(s) 279, 1030, 1296, 2102, 2197
HapII CCGG 3 cut(s) 98, 276, 1031
HgaI GACGC 1 cut(s) 879
Hin1II CATG 8 cut(s) 917, 926, 954, 1370, 1554, 1754, 2114, 2156
HincII GTYRAC 3 cut(s) 513, 1003, 2244
HindII GTYRAC 3 cut(s) 513, 1003, 2244
HinfI GANTC 4 cut(s) 124, 307, 833, 1279
HpaII CCGG 3 cut(s) 98, 276, 1031
HphI GGTGA 3 cut(s) 87, 355, 1211
Hpy166II GTNNAC 9 cut(s) 67, 453, 513, 706, 720, 1003, 1273, 1309, 2244
Hpy188I TCNGA 3 cut(s) 353, 1513, 2147
Hpy8I GTNNAC 9 cut(s) 67, 453, 513, 706, 720, 1003, 1273, 1309, 2244
Hpy99I CGWCG 2 cut(s) 157, 873
HpyAV CCTTC 8 cut(s) 194, 329, 376, 626, 1020, 1883, 1925, 1975
HpyCH4III ACNGT 3 cut(s) 633, 668, 1306
HpyCH4IV ACGT 2 cut(s) 759, 995
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 276, 885, 1036, 1688, 2009, 2135
HpyF3I CTNAG 4 cut(s) 413, 678, 1456, 2247
HpySE526I ACGT 2 cut(s) 759, 995
Hsp92II CATG 8 cut(s) 917, 926, 954, 1370, 1554, 1754, 2114, 2156
Kzo9I GATC 8 cut(s) 8, 494, 788, 943, 966, 1012, 1709, 1954
LmnI GCTCC 4 cut(s) 769, 1180, 1240, 1589
Lsp1109I GCAGC 8 cut(s) 18, 101, 515, 572, 587, 590, 1603, 1625
LweI GCATC 4 cut(s) 101, 908, 2009, 2218
MaeI CTAG 9 cut(s) 6, 42, 645, 1244, 1664, 1707, 1745, 1791, 1901
MaeII ACGT 2 cut(s) 759, 995
MaeIII GTNAC 9 cut(s) 206, 263, 542, 560, 938, 959, 1051, 1963, 2201
MalI GATC 8 cut(s) 10, 496, 790, 945, 968, 1014, 1711, 1956
MboI GATC 8 cut(s) 8, 494, 788, 943, 966, 1012, 1709, 1954
MfeI CAATTG 2 cut(s) 823, 2087
MflI RGATCY 4 cut(s) 8, 788, 966, 1709
MhlI GDGCHC 2 cut(s) 1594, 1848
MlyI GAGTC 2 cut(s) 316, 827
MmeI TCCRAC 2 cut(s) 1158, 2055
Mph1103I ATGCAT 1 cut(s) 697
MroXI GAANNNNTTC 6 cut(s) 449, 1148, 1151, 1507, 1518, 1539
MslI CAYNNNNRTG 2 cut(s) 1266, 1428
MspA1I CMGCKG 3 cut(s) 86, 600, 1616
MspI CCGG 3 cut(s) 98, 276, 1031
MspR9I CCNGG 2 cut(s) 347, 984
MunI CAATTG 2 cut(s) 823, 2087
Mva1269I GAATGC 3 cut(s) 695, 1323, 1606
MvaI CCWGG 2 cut(s) 347, 984
MwoI GCNNNNNNNGC 7 cut(s) 83, 276, 885, 1036, 1688, 2009, 2135
NdeII GATC 8 cut(s) 8, 494, 788, 943, 966, 1012, 1709, 1954
NlaIII CATG 8 cut(s) 917, 926, 954, 1370, 1554, 1754, 2114, 2156
NlaIV GGNNCC 5 cut(s) 102, 421, 817, 1773, 1883
NmuCI GTSAC 3 cut(s) 263, 542, 938
NsiI ATGCAT 1 cut(s) 697
PagI TCATGA 1 cut(s) 2152
PceI AGGCCT 1 cut(s) 2102
PctI GAATGC 3 cut(s) 695, 1323, 1606
PdmI GAANNNNTTC 6 cut(s) 449, 1148, 1151, 1507, 1518, 1539
PfeI GAWTC 2 cut(s) 124, 1279
PflFI GACNNNGTC 1 cut(s) 758
PflMI CCANNNNNTGG 1 cut(s) 429
PfoI TCCNGGA 1 cut(s) 982
PinAI ACCGGT 1 cut(s) 97
PkrI GCNGC 9 cut(s) 33, 88, 91, 530, 587, 602, 605, 1615, 1618
Ple19I CGATCG 1 cut(s) 946
PleI GAGTC 2 cut(s) 315, 827
PpsI GAGTC 2 cut(s) 315, 827
Ppu21I YACGTR 1 cut(s) 996
PpuMI RGGWCCY 1 cut(s) 1881
PshBI ATTAAT 1 cut(s) 1944
Psp124BI GAGCTC 2 cut(s) 1594, 1848
Psp5II RGGWCCY 1 cut(s) 1881
Psp6I CCWGG 2 cut(s) 345, 982
PspFI CCCAGC 2 cut(s) 1039, 1976
PspGI CCWGG 2 cut(s) 345, 982
PspN4I GGNNCC 5 cut(s) 102, 421, 817, 1773, 1883
PspPI GGNCC 6 cut(s) 278, 816, 1771, 1881, 1927, 2195
PspPPI RGGWCCY 1 cut(s) 1881
PstI CTGCAG 2 cut(s) 1615, 1999
PstNI CAGNNNCTG 1 cut(s) 603
PsuI RGATCY 4 cut(s) 8, 788, 966, 1709
PsyI GACNNNGTC 1 cut(s) 758
PvuI CGATCG 1 cut(s) 946
PvuII CAGCTG 2 cut(s) 600, 1616
RsaI GTAC 7 cut(s) 434, 551, 635, 1303, 1749, 1781, 1836
RsaNI GTAC 7 cut(s) 433, 550, 634, 1302, 1748, 1780, 1835
RseI CAYNNNNRTG 2 cut(s) 1266, 1428
SacI GAGCTC 2 cut(s) 1594, 1848
SalI GTCGAC 2 cut(s) 511, 1001
SatI GCNGC 9 cut(s) 32, 87, 90, 529, 586, 601, 604, 1614, 1617
Sau3AI GATC 8 cut(s) 8, 494, 788, 943, 966, 1012, 1709, 1954
Sau96I GGNCC 6 cut(s) 278, 816, 1771, 1881, 1927, 2195
ScaI AGTACT 2 cut(s) 551, 1781
SchI GAGTC 2 cut(s) 316, 827
ScrFI CCNGG 2 cut(s) 347, 984
SduI GDGCHC 2 cut(s) 1594, 1848
SfaNI GCATC 4 cut(s) 101, 908, 2009, 2218
SfcI CTRYAG 2 cut(s) 1611, 1995
SgrAI CRCCGGYG 1 cut(s) 97
SinI GGWCC 4 cut(s) 816, 1771, 1881, 1927
SmiMI CAYNNNNRTG 2 cut(s) 1266, 1428
SmlI CTYRAG 2 cut(s) 311, 1959
SmoI CTYRAG 2 cut(s) 311, 1959
SpeI ACTAGT 2 cut(s) 41, 1744
SseBI AGGCCT 1 cut(s) 2102
SsiI CCGC 4 cut(s) 86, 114, 397, 588
SspMI CTAG 9 cut(s) 6, 42, 645, 1244, 1664, 1707, 1745, 1791, 1901
SstI GAGCTC 2 cut(s) 1594, 1848
StuI AGGCCT 1 cut(s) 2102
StyD4I CCNGG 2 cut(s) 345, 982
StyI CCWWGG 2 cut(s) 1236, 1297
TaaI ACNGT 3 cut(s) 633, 668, 1306
TaiI ACGT 2 cut(s) 762, 998
TaqI TCGA 9 cut(s) 131, 512, 806, 946, 1002, 1578, 1636, 1718, 1953
TaqII GACCGA 1 cut(s) 833
TatI WGTACW 3 cut(s) 549, 1747, 1779
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 2 cut(s) 124, 1279
TscAI CASTG 4 cut(s) 79, 111, 152, 1066
TseFI GTSAC 3 cut(s) 263, 542, 938
TseI GCWGC 8 cut(s) 31, 89, 528, 585, 600, 603, 1613, 1616
Tsp45I GTSAC 3 cut(s) 263, 542, 938
TspRI CASTG 4 cut(s) 79, 111, 152, 1066
Tth111I GACNNNGTC 1 cut(s) 758
Van91I CCANNNNNTGG 1 cut(s) 429
VpaK11BI GGWCC 4 cut(s) 816, 1771, 1881, 1927
VspI ATTAAT 1 cut(s) 1944
XapI RAATTY 3 cut(s) 1487, 2026, 2122
XbaI TCTAGA 2 cut(s) 5, 1706
XmiI GTMKAC 4 cut(s) 512, 705, 1002, 1272
XmnI GAANNNNTTC 6 cut(s) 449, 1148, 1151, 1507, 1518, 1539
XspI CTAG 9 cut(s) 6, 42, 645, 1244, 1664, 1707, 1745, 1791, 1901
ZrmI AGTACT 2 cut(s) 551, 1781
Zsp2I ATGCAT 1 cut(s) 697
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.