Rw2G040850

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
66509500 .. 66512398
2899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G040850.1

Sequence Viewer

Length: 2055 bp
ATGGATGTTGTGCAGTTTTTACTTCATACTACTCTGTTCTTGTGGTGTGTTAGTATTAATACTACTACAGTAGCAGCACCACCACAACAAATCTTAATAGCAAAGCCTAATTGTCCATCACATTGTGGAAACATTTCAATCCCATATCCTTTTGGAATTGGACCAGGTTGTTACGCAGATAACTGGTTCGAAATACTGTGTAATGAGTCAGTCAGCCCACCCAAACCTTTCTTGAACCGCACCACTCTGAATCCTGAGGTACTGGAAATTTCTATTGCAGGAACACTAAAAGTCAGAAACCCGATTACGGTCTCTAATAATTGCAGTGATAAACCAATTCGGCAAGGAGCCTACTTGTGGGGAAGCCCTTTTGTGTTCTCGCAAAAGAACAGATTCACAGTAGTTGGTTGTGGTGTTATGGCTGGGCTGAATTGTAGCTCAGATGGCTTGACTATCTCGGCTACGTGCTTGTCCCAGTGTGAAATTGCCTCCAATGCAAGCAGTACCTGCAATGGTTTGGATTGCAGCCAGGTCTCTATCCCTTCCTTTCTCTCTGCCTTTGATACCAGTTTCATATCTACAACAAATCCATGCAATTATGCATTCTTGTGCGCCGTGTTGGAATGGGGCTTATATCATTCAATCCTTTCAATCCTCGATGTATTTGGAACCTCTTCAATCGCTTCTGATAGATCTGTTAACTGCCTGGAATACAATGACGCCTCTTCAACATATAGTTCCTCAAGGCTGGAATGTTTCTGTGCAATGGGCTTTGAAGGAAACCCCTATCTCATTGAAGGATGTCAAGATATAAATGAATGCTTGGCTCCAAACCGGCAGTGTCCTGTGGACTATGCTTGTAAGAATCATCCTGGATATGCCGAATGCTACTATCCAAAGAGAAAGTCTGCATGTTGCTGGTGGTTGCACAAAGCCATAAAGAAAAGGAAGAACATAAAGCAGAAGGAGAAGTTTTTTAAACAAAATGGTGGTTTATTGTTGGAGCAACAACTATTATCTGGTGAAGTAAATGTCGACAAAATTAAGTTGTTCAATTCGAAGGAGTTAGACAAAGCTACTGACCACTTTAATGTGGACAGAATTCTTGGCCAAGGAGGCCAAGGTACTGTTTACAAAGGAATGCTGGAAGATGGAAGAATTGTTGCTGTAAAGCAGTCTAAAAAACTTGTTGGAGGTGAAGTTGGAAATTTCATTAATGAAATTGTCATTCTTTCACAAATTAACCATAGGAATGTGGTCAAGTTATTGGGGTGCTGTTTAGAGACGGAAGTTCCTCTTTTGTATATTCATCACCATAATGAGGAGTTTCCTCTCACTTGGGAAATGCGCTTACGGGTGTCGATGGAAATTGCAGGAGCTATTTCGTACTTACATTCATCTGCTTCCATGCCTATATACCACAGAGACATCAAGTCTTCTAACATTCTATTGGATGATAAGTATAGAGCCAAAGTAGCAGACTTTGGAACAGCAAGATCTATTGCCATTGATAAGACACACCTTACTACACGAGTACAAGGAACATTTGGTTATCTAGACCCAGAATATTTCCAATCCAGTCAATTCACTGACAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTGCTGAGCTCTTGACAGGACAAAAACCAATTTCTCTGACAACCTCAGATGAATGGAGAAGCCTAGCAAACCATTTCATTCTTTCAATGGAAGGAAATTGCCTGTTCGATATTCTCGATACTCGAGTTAGAAGTGATGGTCGGGAAGAAGAAATTGTGGCAGTTGCTAACCTTGCAAAAAGATGCTTAAATTTGAACGGGAGAAAACGACCTACTATGAAAGAAGTTGCTGTGGAGTTGGAGGGAATCCAATTGTCGGTTAAAGCTCATTCTGATGCTCAACAAAACTTCTCAGAGATTGGGTATGATCGAACTAATGGAATGACCGAGGCTTGGGATGTTTGTTCTACATCAACAGGGTTATCATGTATGGATAGTACTACAGGTTCTTCATTAGATGCACAACCTCTGCTGTCCTTTAAGTATGAGTGA

Protein Analysis

684

Amino Acids

75.76

Weight (kDa)

5.97

Isoelectric Point (pI)

39.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 38 - 98 6.2e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 363 - 617 6.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 365 - 620 4.4e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 515
AccI GTMKAC 1 cut(s) 1035
AciI CCGC 1 cut(s) 238
AcoI YGGCCR 1 cut(s) 1108
AcsI RAATTY 4 cut(s) 267, 1101, 1207, 1813
AcyI GRCGYC 1 cut(s) 720
AdeI CACNNNGTG 1 cut(s) 125
AfaI GTAC 6 cut(s) 261, 505, 1126, 1388, 1536, 2002
AfiI CCNNNNNNNGG 5 cut(s) 307, 357, 1321, 1879, 1956
AhdI GACNNNNNGTC 1 cut(s) 1432
AjnI CCWGG 4 cut(s) 163, 528, 705, 871
AluBI AGCT 6 cut(s) 438, 1076, 1379, 1611, 1633, 1889
AluI AGCT 6 cut(s) 438, 1076, 1379, 1611, 1633, 1889
Alw21I GWGCWC 1 cut(s) 1635
Alw26I GTCTC 4 cut(s) 316, 538, 1277, 1419
AlwNI CAGNNNCTG 1 cut(s) 507
Ama87I CYCGRG 1 cut(s) 1746
AoxI GGCC 2 cut(s) 1108, 1117
ApeKI GCWGC 2 cut(s) 74, 525
ApoI RAATTY 4 cut(s) 267, 1101, 1207, 1813
ArsI GACNNNNNNTTYG 2 cut(s) 890, 922
AseI ATTAAT 2 cut(s) 57, 1215
Asp700I GAANNNNTTC 3 cut(s) 133, 392, 673
AspLEI GCGC 2 cut(s) 614, 1350
AspS9I GGNCC 2 cut(s) 161, 1621
AsuHPI GGTGA 3 cut(s) 1034, 1208, 1304
AsuII TTCGAA 2 cut(s) 189, 1058
AvaI CYCGRG 1 cut(s) 1746
AvaII GGWCC 2 cut(s) 161, 1621
AxyI CCTNAGG 1 cut(s) 255
BaeI ACNNNNGTAYC 2 cut(s) 1734, 1767
BalI TGGCCA 1 cut(s) 1110
BanII GRGCYC 1 cut(s) 1635
BauI CACGAG 1 cut(s) 1530
BbsI GAAGAC 1 cut(s) 1428
Bbv12I GWGCWC 1 cut(s) 1635
BbvI GCAGC 2 cut(s) 86, 537
BccI CCATC 5 cut(s) 124, 437, 1145, 1357, 1754
BceAI ACGGC 1 cut(s) 599
BciT130I CCWGG 4 cut(s) 165, 530, 707, 873
BcoDI GTCTC 4 cut(s) 316, 538, 1277, 1419
BfaI CTAG 2 cut(s) 1556, 1688
BfmI CTRYAG 2 cut(s) 66, 2004
BfuAI ACCTGC 1 cut(s) 515
BglI GCCNNNNNGGC 1 cut(s) 1116
BglII AGATCT 2 cut(s) 692, 1496
BisI GCNGC 2 cut(s) 75, 526
BlpI GCTNAGC 1 cut(s) 1629
BlsI GCNGC 2 cut(s) 76, 527
BmcAI AGTACT 1 cut(s) 2002
Bme1390I CCNGG 4 cut(s) 165, 530, 707, 873
Bme18I GGWCC 2 cut(s) 161, 1621
BmeRI GACNNNNNGTC 1 cut(s) 1432
BmeT110I CYCGRG 1 cut(s) 1746
BmgT120I GGNCC 2 cut(s) 161, 1621
BmiI GGNNCC 3 cut(s) 349, 670, 828
BmrFI CCNGG 4 cut(s) 165, 530, 707, 873
BmrI ACTGGG 1 cut(s) 469
BmsI GCATC 3 cut(s) 1796, 1888, 2011
BmuI ACTGGG 1 cut(s) 469
BpiI GAAGAC 1 cut(s) 1428
Bpu1102I GCTNAGC 1 cut(s) 1629
Bpu14I TTCGAA 2 cut(s) 189, 1058
BpuEI CTTGAG 1 cut(s) 727
BsaAI YACGTR 1 cut(s) 465
BsaHI GRCGYC 1 cut(s) 720
BsaI GGTCTC 2 cut(s) 316, 538
BsaJI CCNNGG 3 cut(s) 1111, 1120, 1950
BsaXI ACNNNNNCTCC 2 cut(s) 1185, 1215
Bsc4I CCNNNNNNNGG 5 cut(s) 307, 357, 1321, 1879, 1956
Bse118I RCCGGY 1 cut(s) 834
Bse1I ACTGG 5 cut(s) 188, 267, 475, 567, 1578
Bse21I CCTNAGG 1 cut(s) 255
Bse3DI GCAATG 2 cut(s) 517, 771
BseBI CCWGG 4 cut(s) 165, 530, 707, 873
BseDI CCNNGG 3 cut(s) 1111, 1120, 1950
BseGI GGATG 5 cut(s) 10, 806, 868, 1459, 1966
BseLI CCNNNNNNNGG 5 cut(s) 307, 357, 1321, 1879, 1956
BseMI GCAATG 2 cut(s) 517, 771
BseMII CTCAG 5 cut(s) 246, 453, 1620, 1683, 1929
BseNI ACTGG 5 cut(s) 188, 267, 475, 567, 1578
BseRI GAGGAG 1 cut(s) 1337
BseXI GCAGC 2 cut(s) 86, 537
BseYI CCCAGC 1 cut(s) 422
BsgI GTGCAG 1 cut(s) 32
BshFI GGCC 2 cut(s) 1110, 1119
BsiHKAI GWGCWC 1 cut(s) 1635
BsiHKCI CYCGRG 1 cut(s) 1746
BsiSI CCGG 1 cut(s) 835
BslFI GGGAC 1 cut(s) 457
BslI CCNNNNNNNGG 5 cut(s) 307, 357, 1321, 1879, 1956
BsmAI GTCTC 4 cut(s) 316, 538, 1277, 1419
BsmBI CGTCTC 1 cut(s) 1277
BsmFI GGGAC 1 cut(s) 457
BsmI GAATGC 4 cut(s) 602, 824, 890, 1146
BsnI GGCC 2 cut(s) 1110, 1119
Bso31I GGTCTC 2 cut(s) 316, 538
BsoBI CYCGRG 1 cut(s) 1746
Bsp119I TTCGAA 2 cut(s) 189, 1058
Bsp1286I GDGCHC 1 cut(s) 1635
Bsp143I GATC 3 cut(s) 692, 1496, 1930
Bsp1720I GCTNAGC 1 cut(s) 1629
BspACI CCGC 1 cut(s) 238
BspANI GGCC 2 cut(s) 1110, 1119
BspCNI CTCAG 5 cut(s) 247, 452, 1621, 1682, 1928
BspLI GGNNCC 3 cut(s) 349, 670, 828
BspMI ACCTGC 1 cut(s) 515
BspT104I TTCGAA 2 cut(s) 189, 1058
BspTNI GGTCTC 2 cut(s) 316, 538
BsrDI GCAATG 2 cut(s) 517, 771
BsrFI RCCGGY 1 cut(s) 834
BsrI ACTGG 5 cut(s) 188, 267, 475, 567, 1578
BssAI RCCGGY 1 cut(s) 834
BssECI CCNNGG 3 cut(s) 1111, 1120, 1950
BssMI GATC 3 cut(s) 692, 1496, 1930
BssNI GRCGYC 1 cut(s) 720
BssSI CACGAG 1 cut(s) 1530
BssT1I CCWWGG 2 cut(s) 1111, 1120
Bst2BI CACGAG 1 cut(s) 1530
Bst2UI CCWGG 4 cut(s) 165, 530, 707, 873
Bst4CI ACNGT 5 cut(s) 70, 198, 310, 400, 1129
Bst6I CTCTTC 2 cut(s) 679, 730
BstACI GRCGYC 1 cut(s) 720
BstAPI GCANNNNNTGC 1 cut(s) 507
BstBAI YACGTR 1 cut(s) 465
BstBI TTCGAA 2 cut(s) 189, 1058
BstC8I GCNNGC 1 cut(s) 499
BstDEI CTNAG 5 cut(s) 255, 439, 1629, 1669, 1915
BstF5I GGATG 5 cut(s) 10, 806, 868, 1459, 1966
BstHHI GCGC 2 cut(s) 614, 1350
BstKTI GATC 3 cut(s) 695, 1499, 1933
BstMAI GTCTC 4 cut(s) 316, 538, 1277, 1419
BstMBI GATC 3 cut(s) 692, 1496, 1930
BstMWI GCNNNNNNNGC 6 cut(s) 444, 494, 507, 1116, 1475, 1796
BstNI CCWGG 4 cut(s) 165, 530, 707, 873
BstNSI RCATGY 1 cut(s) 915
BstSCI CCNGG 4 cut(s) 163, 528, 705, 871
BstSFI CTRYAG 2 cut(s) 66, 2004
BstV1I GCAGC 2 cut(s) 86, 537
BstV2I GAAGAC 1 cut(s) 1428
BstX2I RGATCY 2 cut(s) 692, 1496
BstYI RGATCY 2 cut(s) 692, 1496
Bsu36I CCTNAGG 1 cut(s) 255
BsuRI GGCC 2 cut(s) 1110, 1119
BtsCI GGATG 5 cut(s) 10, 806, 868, 1459, 1966
BtsI GCAGTG 2 cut(s) 331, 845
BtsIMutI CAGTG 4 cut(s) 331, 482, 845, 1587
BveI ACCTGC 1 cut(s) 515
Cac8I GCNNGC 1 cut(s) 499
CaiI CAGNNNCTG 1 cut(s) 507
CfoI GCGC 2 cut(s) 614, 1350
Cfr10I RCCGGY 1 cut(s) 834
Cfr13I GGNCC 2 cut(s) 161, 1621
CseI GACGC 1 cut(s) 728
CsiI ACCWGGT 1 cut(s) 163
Csp6I GTAC 6 cut(s) 260, 504, 1125, 1387, 1535, 2001
CviAII CATG 4 cut(s) 591, 912, 1408, 1989
CviQI GTAC 6 cut(s) 260, 504, 1125, 1387, 1535, 2001
DdeI CTNAG 5 cut(s) 255, 439, 1629, 1669, 1915
DpnI GATC 3 cut(s) 694, 1498, 1932
DpnII GATC 3 cut(s) 692, 1496, 1930
DraI TTTAAA 1 cut(s) 979
DraIII CACNNNGTG 1 cut(s) 125
DriI GACNNNNNGTC 1 cut(s) 1432
EaeI YGGCCR 1 cut(s) 1108
Eam1104I CTCTTC 2 cut(s) 679, 730
Eam1105I GACNNNNNGTC 1 cut(s) 1432
EarI CTCTTC 2 cut(s) 679, 730
Ecl136II GAGCTC 1 cut(s) 1633
Eco130I CCWWGG 2 cut(s) 1111, 1120
Eco24I GRGCYC 1 cut(s) 1635
Eco31I GGTCTC 2 cut(s) 316, 538
Eco47I GGWCC 2 cut(s) 161, 1621
Eco53kI GAGCTC 1 cut(s) 1633
Eco81I CCTNAGG 1 cut(s) 255
Eco88I CYCGRG 1 cut(s) 1746
EcoICRI GAGCTC 1 cut(s) 1633
EcoRI GAATTC 1 cut(s) 1101
EcoRII CCWGG 4 cut(s) 163, 528, 705, 871
EcoT14I CCWWGG 2 cut(s) 1111, 1120
EcoT22I ATGCAT 1 cut(s) 604
EcoT38I GRGCYC 1 cut(s) 1635
ErhI CCWWGG 2 cut(s) 1111, 1120
Esp3I CGTCTC 1 cut(s) 1277
FaeI CATG 4 cut(s) 594, 915, 1411, 1992
FalI AAGNNNNNCTT 2 cut(s) 1281, 1313
FaqI GGGAC 1 cut(s) 457
FatI CATG 4 cut(s) 590, 911, 1407, 1988
FblI GTMKAC 1 cut(s) 1035
Fnu4HI GCNGC 2 cut(s) 75, 526
FokI GGATG 5 cut(s) 17, 813, 855, 1466, 1973
FriOI GRGCYC 1 cut(s) 1635
Fsp4HI GCNGC 2 cut(s) 75, 526
FspBI CTAG 2 cut(s) 1556, 1688
GlaI GCGC 2 cut(s) 613, 1349
GluI GCNGC 2 cut(s) 75, 526
GsaI CCCAGC 1 cut(s) 426
HaeIII GGCC 2 cut(s) 1110, 1119
HapII CCGG 1 cut(s) 835
HgaI GACGC 1 cut(s) 728
HhaI GCGC 2 cut(s) 614, 1350
Hin1I GRCGYC 1 cut(s) 720
Hin1II CATG 4 cut(s) 594, 915, 1411, 1992
Hin6I GCGC 2 cut(s) 612, 1348
HinP1I GCGC 2 cut(s) 612, 1348
HincII GTYRAC 2 cut(s) 700, 1036
HindII GTYRAC 2 cut(s) 700, 1036
HinfI GANTC 5 cut(s) 206, 250, 393, 865, 1869
HpaI GTTAAC 1 cut(s) 700
HpaII CCGG 1 cut(s) 835
HphI GGTGA 3 cut(s) 1034, 1208, 1304
Hpy166II GTNNAC 5 cut(s) 700, 850, 1036, 1096, 1132
Hpy188I TCNGA 8 cut(s) 249, 296, 442, 688, 1662, 1672, 1897, 1918
Hpy188III TCNNGA 7 cut(s) 232, 254, 806, 1556, 1636, 1739, 1766
Hpy8I GTNNAC 5 cut(s) 700, 850, 1036, 1096, 1132
HpyAV CCTTC 6 cut(s) 552, 770, 791, 958, 1054, 1709
HpyCH4III ACNGT 5 cut(s) 70, 198, 310, 400, 1129
HpyCH4IV ACGT 1 cut(s) 464
HpyF10VI GCNNNNNNNGC 6 cut(s) 444, 494, 507, 1116, 1475, 1796
HpyF3I CTNAG 5 cut(s) 255, 439, 1629, 1669, 1915
HpySE526I ACGT 1 cut(s) 464
Hsp92I GRCGYC 1 cut(s) 720
Hsp92II CATG 4 cut(s) 594, 915, 1411, 1992
HspAI GCGC 2 cut(s) 612, 1348
KspAI GTTAAC 1 cut(s) 700
Kzo9I GATC 3 cut(s) 692, 1496, 1930
LmnI GCTCC 4 cut(s) 347, 832, 1003, 1376
Lsp1109I GCAGC 2 cut(s) 86, 537
LweI GCATC 3 cut(s) 1796, 1888, 2011
MabI ACCWGGT 1 cut(s) 163
MaeI CTAG 2 cut(s) 1556, 1688
MaeII ACGT 1 cut(s) 464
MaeIII GTNAC 1 cut(s) 170
MalI GATC 3 cut(s) 694, 1498, 1932
MboI GATC 3 cut(s) 692, 1496, 1930
MboII GAAGA 9 cut(s) 666, 717, 961, 1160, 1167, 1428, 1781, 1784, 2004
MfeI CAATTG 1 cut(s) 1874
MflI RGATCY 2 cut(s) 692, 1496
MhlI GDGCHC 1 cut(s) 1635
MlsI TGGCCA 1 cut(s) 1110
MluNI TGGCCA 1 cut(s) 1110
MlyI GAGTC 1 cut(s) 215
MmeI TCCRAC 5 cut(s) 600, 981, 1171, 1183, 1842
Mox20I TGGCCA 1 cut(s) 1110
Mph1103I ATGCAT 1 cut(s) 604
MroXI GAANNNNTTC 3 cut(s) 133, 392, 673
MscI TGGCCA 1 cut(s) 1110
MslI CAYNNNNRTG 5 cut(s) 607, 1089, 1251, 1317, 1896
Msp20I TGGCCA 1 cut(s) 1110
MspI CCGG 1 cut(s) 835
MspR9I CCNGG 4 cut(s) 165, 530, 707, 873
MunI CAATTG 1 cut(s) 1874
Mva1269I GAATGC 4 cut(s) 602, 824, 890, 1146
MvaI CCWGG 4 cut(s) 165, 530, 707, 873
MwoI GCNNNNNNNGC 6 cut(s) 444, 494, 507, 1116, 1475, 1796
NdeII GATC 3 cut(s) 692, 1496, 1930
NlaIII CATG 4 cut(s) 594, 915, 1411, 1992
NlaIV GGNNCC 3 cut(s) 349, 670, 828
NmeAIII GCCGAG 1 cut(s) 437
NsiI ATGCAT 1 cut(s) 604
NspI RCATGY 1 cut(s) 915
NspV TTCGAA 2 cut(s) 189, 1058
PaeR7I CTCGAG 1 cut(s) 1746
PcsI WCGNNNNNNNCGW 1 cut(s) 1737
PctI GAATGC 4 cut(s) 602, 824, 890, 1146
PdmI GAANNNNTTC 3 cut(s) 133, 392, 673
PfeI GAWTC 4 cut(s) 250, 393, 865, 1869
PfoI TCCNGGA 1 cut(s) 871
PkrI GCNGC 2 cut(s) 76, 527
PleI GAGTC 1 cut(s) 214
PpsI GAGTC 1 cut(s) 214
Ppu21I YACGTR 1 cut(s) 465
PshBI ATTAAT 2 cut(s) 57, 1215
Psp124BI GAGCTC 1 cut(s) 1635
Psp6I CCWGG 4 cut(s) 163, 528, 705, 871
PspFI CCCAGC 1 cut(s) 422
PspGI CCWGG 4 cut(s) 163, 528, 705, 871
PspN4I GGNNCC 3 cut(s) 349, 670, 828
PspPI GGNCC 2 cut(s) 161, 1621
PspXI VCTCGAGB 1 cut(s) 1746
PsrI GAACNNNNNNTAC 2 cut(s) 1993, 2025
PstNI CAGNNNCTG 1 cut(s) 507
PsuI RGATCY 2 cut(s) 692, 1496
RsaI GTAC 6 cut(s) 261, 505, 1126, 1388, 1536, 2002
RsaNI GTAC 6 cut(s) 260, 504, 1125, 1387, 1535, 2001
RseI CAYNNNNRTG 5 cut(s) 607, 1089, 1251, 1317, 1896
SacI GAGCTC 1 cut(s) 1635
SalI GTCGAC 1 cut(s) 1034
SatI GCNGC 2 cut(s) 75, 526
Sau3AI GATC 3 cut(s) 692, 1496, 1930
Sau96I GGNCC 2 cut(s) 161, 1621
ScaI AGTACT 1 cut(s) 2002
SchI GAGTC 1 cut(s) 215
ScrFI CCNGG 4 cut(s) 165, 530, 707, 873
SduI GDGCHC 1 cut(s) 1635
SexAI ACCWGGT 1 cut(s) 163
SfaNI GCATC 3 cut(s) 1796, 1888, 2011
SfcI CTRYAG 2 cut(s) 66, 2004
SfiI GGCCNNNNNGGCC 1 cut(s) 1116
Sfr274I CTCGAG 1 cut(s) 1746
SfuI TTCGAA 2 cut(s) 189, 1058
SinI GGWCC 2 cut(s) 161, 1621
SlaI CTCGAG 1 cut(s) 1746
SmiMI CAYNNNNRTG 5 cut(s) 607, 1089, 1251, 1317, 1896
SmlI CTYRAG 2 cut(s) 742, 1746
SmoI CTYRAG 2 cut(s) 742, 1746
SsiI CCGC 1 cut(s) 238
SspI AATATT 1 cut(s) 1568
SspMI CTAG 2 cut(s) 1556, 1688
SstI GAGCTC 1 cut(s) 1635
StyD4I CCNGG 4 cut(s) 163, 528, 705, 871
StyI CCWWGG 2 cut(s) 1111, 1120
TaaI ACNGT 5 cut(s) 70, 198, 310, 400, 1129
TaiI ACGT 1 cut(s) 467
TaqI TCGA 9 cut(s) 189, 657, 1035, 1058, 1361, 1731, 1740, 1747, 1933
TaqII GACCGA 1 cut(s) 1964
TatI WGTACW 2 cut(s) 1534, 2000
TfiI GAWTC 4 cut(s) 250, 393, 865, 1869
TscAI CASTG 4 cut(s) 331, 482, 845, 1594
TseI GCWGC 2 cut(s) 74, 525
TspGWI ACGGA 1 cut(s) 1301
TspRI CASTG 4 cut(s) 331, 482, 845, 1594
VpaK11BI GGWCC 2 cut(s) 161, 1621
VspI ATTAAT 2 cut(s) 57, 1215
XapI RAATTY 4 cut(s) 267, 1101, 1207, 1813
XbaI TCTAGA 1 cut(s) 1555
XceI RCATGY 1 cut(s) 915
XhoI CTCGAG 1 cut(s) 1746
XmiI GTMKAC 1 cut(s) 1035
XmnI GAANNNNTTC 3 cut(s) 133, 392, 673
XspI CTAG 2 cut(s) 1556, 1688
ZrmI AGTACT 1 cut(s) 2002
Zsp2I ATGCAT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.