FvH4_6g37660

wall-associated receptor kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000052
Physical Location & Seq
Forward (+)
29648713 .. 29651198
2486 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g37660.t1

Sequence Viewer

Length: 2202 bp
ATGCTCCTACCTCATATTTCTCTTTTAACGTCCTTGTGCTTTTTGAGCTGTAGTGTTATACTTGGCGTAGCATCATCAGTCTCGTTAGCTAACCCTAATTGTCCATCCCATTGTGGAGACATAGAAATCCCATATCCCTTTGGAATTGGAACGGATTGTTTCAAGTCCAACGAATCCGGTAGGTTCCAAATATTGTGTGACACCACGACCAACCCTCCCAAACCGTTCTTGAACCTTACTGATGGTAGTCGACCGGAGGTACTGGAGATATCTCTTGAGGGCACACTAAAAATAAAAAGCCCTATCACCTTCTCTGATTGCCCTAACAAGCCAAACCATCGCCAGCCACCCAACCTGCAGCCAACTCCCGCTTGGTTCTCCGAGAAGAACAAGTTCATTTCAGTGAGTTGCGGGAGGGTTGCGTCGCTAACGTTCCCTGGACCTCGAGGGAATACAACGGCAGCCGTCTGTTTGTCCATTTGCGATAAGTACAGTAGCATATTTGTAAATAATAACAGCTGCGGTGGTATCAGCTGCTGTCAGACAACCATTCCGGCCGGTTCTGATGCCTGGAATACCAGTTTTGGACCCGTTATAATAACGACTGACGACGACGCCGATGAAAGACCTTGTGTGTATGCATTCCTGGTAGATGAAGAATGGTTTACGTCTAAATCAACAAATACTTCTGCCATTGCTGATGAGATGGACGAAGTCCCCGTACTGTTAGATTGGTGGTTCTCTGGAGGAATAGATAATTCTACTGAGGATTATGTGCACACGAATTGTGAATCTGAGTTAGGTCCATGTTCATGCTTAGAGGGCTATGAAGGAAACCCCTATCTTCCTGGTGGGTGTCAAGATATCAACGAATGCGAGGTTCCATATACATGTCCTTCCGGCAATTGTTTCAATATTAATGGGACCTATGAGTGCTACACGTCACGTTCAGATCGGCTCTTAAGGCAGATTAAAGTTGGCATTATAGTTCTTTGCAGTGTTTTCGGATTGTTGTTTCAAATTGTTGGAGCATGGTGGTTACGCAAGGTCATCAAGAAAAGGAAAAACATTAAGCACAAGCAGAAGTTTTTCAGACTGAATGGTGGTTTGTTGTTGGAGCAACAGTTATCTTCCGGCGAAGTGAATGTTGAGAAGATTAAATTGTTCAATGCAAAGGAGTTGGAGAAAGCCACAGACCGGTTTAATCTAGACAGAATTCTCGGTGAAGGGGGCCAAGGTACTGTCTATAAAGGAATGCTTGCAGATGGAAGAATTGTTGCCGTCAAGAAGTCAAAAATTGAAAATGGAGGCGAAGTGAGTCAATTCATTAATGAAATTGTCATTCTTTCACAAATCAACCACAGGAATGTGGTTAAACTCTTGGGATGTTGTTTAGAGAGTGAAGTTCCCCTATTGGTCTATGAATTTCTACCCAACGGAACCCTTTCTCAATACATTCACAGTCGTGATGAGGGGTTTCCTTTCACTTGGGAAATGCGACTACGAGTTGGTATCGAAGTTGCTGGAGCCCTTTCCTACTTGCATTCATCTGCTTCGATGCCAATTTATCATCGAGACATTAAGTCTTCAAACATACTCTTGGATGAGAGGCATAGAGCAAAAGTTGCAGACTTTGGAACCTCAAGATCTGTCTCCATTGACCAAACACATCTTACCATGACACATGTTAATGGAACCTTTGGTTATTTGGACCCTGAGTATTTCCAGTCTAGTCAATTTACAGATAAGAGTGACGTTTATAGCTTCGGAGTAGTCCTTGCCGAGCTATTAACTGGACAAAAACCAGTTTCTGTAACAAGGTCAGAGGAGGGGAGACATGAAGGGAGAAGCCTAGCAACTTATTTTATTGTTTCCATGGAGGAAAATTTCTTGTTTGATATTCTTGATGCTGAAGTTATGAAAGGAGGTAAGAAAGAAGAGATAACGGCGGTTGCTAATCTTGCAAAACGTTGCTTGAATATGAAAGGAAAGAAGCGTCCTTCTATGAAAGAAATAGCGATTGAGTTGGAGGAAATTCTAATGTCAAGTAAATCATCGGATGTCGAACGCATTGCAGAGCTTGAATATCTCCAGAGAGAAATGACCGAGGCTTGGGATGTTGTTCCTACATCAATAGGGTCTCATTTGGACACCAGTTCTTCGTTAGAAGTACAATCACTATTGTCTTTCAAGTCGCACTGA

Protein Analysis

734

Amino Acids

81.26

Weight (kDa)

5.35

Isoelectric Point (pI)

42.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 34 - 98 1.8e-10 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 402 - 672 1.6e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 402 - 675 2.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 596
AbsI CCTCGAGG 1 cut(s) 444
Acc36I ACCTGC 1 cut(s) 363
AccI GTMKAC 1 cut(s) 250
AciI CCGC 4 cut(s) 369, 411, 522, 1949
AclI AACGTT 2 cut(s) 431, 1969
AcoI YGGCCR 1 cut(s) 555
AcsI RAATTY 4 cut(s) 1215, 1424, 1885, 2034
AcuI CTGAAG 1 cut(s) 1932
AcyI GRCGYC 1 cut(s) 615
AfaI GTAC 5 cut(s) 261, 491, 723, 1240, 2172
AfiI CCNNNNNNNGG 2 cut(s) 1197, 2112
AflII CTTAAG 1 cut(s) 961
AflIII ACRYGT 3 cut(s) 890, 939, 1684
AgeI ACCGGT 1 cut(s) 1197
AhdI GACNNNNNGTC 1 cut(s) 1582
AjiI CACGTC 1 cut(s) 942
AjnI CCWGG 4 cut(s) 436, 569, 645, 847
AleI CACNNNNGTG 1 cut(s) 1464
AluBI AGCT 7 cut(s) 48, 89, 519, 534, 1764, 1786, 2080
AluI AGCT 7 cut(s) 48, 89, 519, 534, 1764, 1786, 2080
Alw21I GWGCWC 1 cut(s) 780
Alw26I GTCTC 6 cut(s) 85, 111, 1569, 1657, 1828, 2145
Alw44I GTGCAC 1 cut(s) 776
AlwNI CAGNNNCTG 2 cut(s) 537, 1811
Ama87I CYCGRG 1 cut(s) 444
AoxI GGCC 2 cut(s) 555, 1231
ApaLI GTGCAC 1 cut(s) 776
ApeKI GCWGC 4 cut(s) 358, 461, 519, 534
ApoI RAATTY 4 cut(s) 1215, 1424, 1885, 2034
AseI ATTAAT 2 cut(s) 918, 1329
AsiGI ACCGGT 1 cut(s) 1197
Asp700I GAANNNNTTC 3 cut(s) 392, 1088, 1444
AspS9I GGNCC 6 cut(s) 440, 587, 803, 924, 1231, 1711
AsuHPI GGTGA 2 cut(s) 298, 1235
AvaI CYCGRG 1 cut(s) 444
AvaII GGWCC 5 cut(s) 440, 587, 803, 924, 1711
BaeGI GKGCMC 2 cut(s) 284, 780
BanII GRGCYC 1 cut(s) 1531
BarI GAAGNNNNNNTAC 2 cut(s) 705, 737
BbsI GAAGAC 1 cut(s) 1578
Bbv12I GWGCWC 1 cut(s) 780
BbvI GCAGC 4 cut(s) 370, 473, 506, 521
BccI CCATC 5 cut(s) 112, 236, 345, 700, 1259
BceAI ACGGC 4 cut(s) 449, 474, 1265, 1962
BcgI CGANNNNNNTGC 4 cut(s) 985, 1019, 2054, 2088
BciT130I CCWGG 4 cut(s) 438, 571, 647, 849
BcoDI GTCTC 6 cut(s) 85, 111, 1569, 1657, 1828, 2145
BfaI CTAG 3 cut(s) 1208, 1731, 1853
BfmI CTRYAG 2 cut(s) 49, 356
BfrI CTTAAG 1 cut(s) 961
BfuAI ACCTGC 1 cut(s) 363
BglII AGATCT 1 cut(s) 1646
BisI GCNGC 4 cut(s) 359, 462, 520, 535
BlsI GCNGC 4 cut(s) 360, 463, 521, 536
Bme1390I CCNGG 4 cut(s) 438, 571, 647, 849
Bme18I GGWCC 5 cut(s) 440, 587, 803, 924, 1711
BmeRI GACNNNNNGTC 1 cut(s) 1582
BmeT110I CYCGRG 1 cut(s) 444
BmgBI CACGTC 1 cut(s) 942
BmgT120I GGNCC 6 cut(s) 440, 587, 803, 924, 1231, 1711
BmrFI CCNGG 4 cut(s) 438, 571, 647, 849
BmsI GCATC 4 cut(s) 80, 556, 1548, 1897
BpiI GAAGAC 1 cut(s) 1578
BpmI CTGGAG 4 cut(s) 284, 765, 1545, 2075
BpuEI CTTGAG 2 cut(s) 296, 1627
BsaHI GRCGYC 1 cut(s) 615
BsaI GGTCTC 1 cut(s) 2145
BsaJI CCNNGG 4 cut(s) 436, 1234, 1875, 2106
BsaWI WCCGGW 3 cut(s) 176, 253, 1197
BsaXI ACNNNNNCTCC 6 cut(s) 199, 229, 1109, 1139, 1299, 1329
Bsc4I CCNNNNNNNGG 2 cut(s) 1197, 2112
Bse118I RCCGGY 2 cut(s) 557, 1197
Bse1I ACTGG 6 cut(s) 267, 579, 1726, 1798, 1805, 2154
Bse3DI GCAATG 2 cut(s) 693, 2070
BseBI CCWGG 4 cut(s) 438, 571, 647, 849
BseDI CCNNGG 4 cut(s) 436, 1234, 1875, 2106
BseGI GGATG 5 cut(s) 104, 1391, 1609, 2065, 2122
BseLI CCNNNNNNNGG 2 cut(s) 1197, 2112
BseMI GCAATG 2 cut(s) 693, 2070
BseMII CTCAG 3 cut(s) 756, 786, 1707
BseNI ACTGG 6 cut(s) 267, 579, 1726, 1798, 1805, 2154
BseRI GAGGAG 1 cut(s) 1841
BseSI GKGCMC 2 cut(s) 284, 780
BseX3I CGGCCG 1 cut(s) 555
BseXI GCAGC 4 cut(s) 370, 473, 506, 521
Bsh1285I CGRYCG 2 cut(s) 254, 558
BshFI GGCC 2 cut(s) 557, 1233
BshTI ACCGGT 1 cut(s) 1197
BsiEI CGRYCG 2 cut(s) 254, 558
BsiHKAI GWGCWC 1 cut(s) 780
BsiHKCI CYCGRG 1 cut(s) 444
BsiSI CCGG 7 cut(s) 177, 254, 554, 558, 900, 1134, 1198
BslFI GGGAC 2 cut(s) 701, 937
BslI CCNNNNNNNGG 2 cut(s) 1197, 2112
BsmAI GTCTC 6 cut(s) 85, 111, 1569, 1657, 1828, 2145
BsmFI GGGAC 2 cut(s) 701, 937
BsmI GAATGC 4 cut(s) 641, 878, 1260, 1543
BsnI GGCC 2 cut(s) 557, 1233
Bso31I GGTCTC 1 cut(s) 2145
BsoBI CYCGRG 1 cut(s) 444
Bsp1286I GDGCHC 3 cut(s) 284, 780, 1531
Bsp143I GATC 2 cut(s) 952, 1646
Bsp19I CCATGG 1 cut(s) 1875
BspACI CCGC 4 cut(s) 369, 411, 522, 1949
BspANI GGCC 2 cut(s) 557, 1233
BspCNI CTCAG 3 cut(s) 757, 787, 1708
BspMAI CTGCAG 1 cut(s) 360
BspMI ACCTGC 1 cut(s) 363
BspTI CTTAAG 1 cut(s) 961
BspTNI GGTCTC 1 cut(s) 2145
BsrDI GCAATG 2 cut(s) 693, 2070
BsrFI RCCGGY 2 cut(s) 557, 1197
BsrI ACTGG 6 cut(s) 267, 579, 1726, 1798, 1805, 2154
BssAI RCCGGY 2 cut(s) 557, 1197
BssECI CCNNGG 4 cut(s) 436, 1234, 1875, 2106
BssMI GATC 2 cut(s) 952, 1646
BssNI GRCGYC 1 cut(s) 615
BssT1I CCWWGG 2 cut(s) 1234, 1875
Bst2UI CCWGG 4 cut(s) 438, 571, 647, 849
Bst4CI ACNGT 6 cut(s) 225, 494, 726, 1125, 1243, 1463
Bst6I CTCTTC 1 cut(s) 1932
BstACI GRCGYC 1 cut(s) 615
BstAFI CTTAAG 1 cut(s) 961
BstAPI GCANNNNNTGC 1 cut(s) 1625
BstC8I GCNNGC 2 cut(s) 344, 1260
BstDEI CTNAG 4 cut(s) 765, 795, 817, 1716
BstDSI CCRYGG 1 cut(s) 1875
BstF5I GGATG 5 cut(s) 104, 1391, 1609, 2065, 2122
BstKTI GATC 2 cut(s) 955, 1649
BstMAI GTCTC 6 cut(s) 85, 111, 1569, 1657, 1828, 2145
BstMBI GATC 2 cut(s) 952, 1646
BstMCI CGRYCG 2 cut(s) 254, 558
BstMWI GCNNNNNNNGC 5 cut(s) 45, 822, 964, 1625, 1961
BstNI CCWGG 4 cut(s) 438, 571, 647, 849
BstNSI RCATGY 2 cut(s) 894, 1688
BstSCI CCNGG 4 cut(s) 436, 569, 645, 847
BstSFI CTRYAG 2 cut(s) 49, 356
BstSLI GKGCMC 2 cut(s) 284, 780
BstV1I GCAGC 4 cut(s) 370, 473, 506, 521
BstV2I GAAGAC 1 cut(s) 1578
BstX2I RGATCY 1 cut(s) 1646
BstYI RGATCY 1 cut(s) 1646
BstZI CGGCCG 1 cut(s) 555
BsuRI GGCC 2 cut(s) 557, 1233
BtgI CCRYGG 1 cut(s) 1875
BtgZI GCGATG 1 cut(s) 323
BtrI CACGTC 1 cut(s) 942
BtsCI GGATG 5 cut(s) 104, 1391, 1609, 2065, 2122
BtsI GCAGTG 1 cut(s) 1003
BtsIMutI CAGTG 3 cut(s) 408, 1003, 2197
BveI ACCTGC 1 cut(s) 363
Cac8I GCNNGC 2 cut(s) 344, 1260
CaiI CAGNNNCTG 2 cut(s) 537, 1811
Cfr10I RCCGGY 2 cut(s) 557, 1197
Cfr13I GGNCC 6 cut(s) 440, 587, 803, 924, 1231, 1711
CseI GACGC 3 cut(s) 411, 623, 1985
Csp6I GTAC 5 cut(s) 260, 490, 722, 1239, 2171
CspAI ACCGGT 1 cut(s) 1197
CviAII CATG 8 cut(s) 807, 813, 891, 1032, 1678, 1685, 1838, 1876
CviQI GTAC 5 cut(s) 260, 490, 722, 1239, 2171
DdeI CTNAG 4 cut(s) 765, 795, 817, 1716
DpnI GATC 2 cut(s) 954, 1648
DpnII GATC 2 cut(s) 952, 1646
DriI GACNNNNNGTC 1 cut(s) 1582
EaeI YGGCCR 1 cut(s) 555
EagI CGGCCG 1 cut(s) 555
Eam1104I CTCTTC 1 cut(s) 1932
Eam1105I GACNNNNNGTC 1 cut(s) 1582
EarI CTCTTC 1 cut(s) 1932
EclXI CGGCCG 1 cut(s) 555
Eco130I CCWWGG 2 cut(s) 1234, 1875
Eco24I GRGCYC 1 cut(s) 1531
Eco31I GGTCTC 1 cut(s) 2145
Eco32I GATATC 2 cut(s) 270, 865
Eco47I GGWCC 5 cut(s) 440, 587, 803, 924, 1711
Eco52I CGGCCG 1 cut(s) 555
Eco57I CTGAAG 1 cut(s) 1932
Eco88I CYCGRG 1 cut(s) 444
EcoO109I RGGNCCY 1 cut(s) 924
EcoRI GAATTC 1 cut(s) 1215
EcoRII CCWGG 4 cut(s) 436, 569, 645, 847
EcoRV GATATC 2 cut(s) 270, 865
EcoT14I CCWWGG 2 cut(s) 1234, 1875
EcoT22I ATGCAT 1 cut(s) 643
EcoT38I GRGCYC 1 cut(s) 1531
ErhI CCWWGG 2 cut(s) 1234, 1875
FaeI CATG 8 cut(s) 810, 816, 894, 1035, 1681, 1688, 1841, 1879
FalI AAGNNNNNCTT 2 cut(s) 1242, 1274
FaqI GGGAC 2 cut(s) 701, 937
FatI CATG 8 cut(s) 806, 812, 890, 1031, 1677, 1684, 1837, 1875
FauI CCCGC 2 cut(s) 376, 404
FblI GTMKAC 1 cut(s) 250
Fnu4HI GCNGC 4 cut(s) 359, 462, 520, 535
FokI GGATG 5 cut(s) 91, 1398, 1616, 2072, 2129
FriOI GRGCYC 1 cut(s) 1531
Fsp4HI GCNGC 4 cut(s) 359, 462, 520, 535
FspBI CTAG 3 cut(s) 1208, 1731, 1853
GluI GCNGC 4 cut(s) 359, 462, 520, 535
GsuI CTGGAG 4 cut(s) 284, 765, 1545, 2075
HaeIII GGCC 2 cut(s) 557, 1233
HapII CCGG 7 cut(s) 177, 254, 554, 558, 900, 1134, 1198
HgaI GACGC 3 cut(s) 411, 623, 1985
Hin1I GRCGYC 1 cut(s) 615
Hin1II CATG 8 cut(s) 810, 816, 894, 1035, 1681, 1688, 1841, 1879
HincII GTYRAC 1 cut(s) 251
HindII GTYRAC 1 cut(s) 251
HinfI GANTC 3 cut(s) 173, 791, 1318
HpaII CCGG 7 cut(s) 177, 254, 554, 558, 900, 1134, 1198
HphI GGTGA 2 cut(s) 298, 1235
Hpy166II GTNNAC 3 cut(s) 251, 666, 778
Hpy8I GTNNAC 3 cut(s) 251, 666, 778
Hpy99I CGWCG 3 cut(s) 427, 614, 617
HpyAV CCTTC 6 cut(s) 319, 824, 906, 1220, 1835, 2010
HpyCH4III ACNGT 6 cut(s) 225, 494, 726, 1125, 1243, 1463
HpyCH4IV ACGT 7 cut(s) 29, 431, 668, 941, 946, 1755, 1969
HpyF10VI GCNNNNNNNGC 5 cut(s) 45, 822, 964, 1625, 1961
HpyF3I CTNAG 4 cut(s) 765, 795, 817, 1716
HpySE526I ACGT 7 cut(s) 29, 431, 668, 941, 946, 1755, 1969
Hsp92I GRCGYC 1 cut(s) 615
Hsp92II CATG 8 cut(s) 810, 816, 894, 1035, 1681, 1688, 1841, 1879
Kzo9I GATC 2 cut(s) 952, 1646
LmnI GCTCC 4 cut(s) 9, 1028, 1117, 1526
Lsp1109I GCAGC 4 cut(s) 370, 473, 506, 521
LweI GCATC 4 cut(s) 80, 556, 1548, 1897
MaeI CTAG 3 cut(s) 1208, 1731, 1853
MaeII ACGT 7 cut(s) 29, 431, 668, 941, 946, 1755, 1969
MaeIII GTNAC 5 cut(s) 197, 942, 1038, 1751, 1813
MalI GATC 2 cut(s) 954, 1648
MboI GATC 2 cut(s) 952, 1646
MboII GAAGA 9 cut(s) 397, 668, 836, 1122, 1165, 1281, 1578, 1949, 2151
MfeI CAATTG 1 cut(s) 904
MflI RGATCY 1 cut(s) 1646
MhlI GDGCHC 3 cut(s) 284, 780, 1531
MlyI GAGTC 1 cut(s) 1327
MmeI TCCRAC 5 cut(s) 192, 1006, 1095, 1161, 2007
Mph1103I ATGCAT 1 cut(s) 643
MroXI GAANNNNTTC 3 cut(s) 392, 1088, 1444
MslI CAYNNNNRTG 6 cut(s) 401, 811, 889, 1365, 1464, 1689
MspA1I CMGCKG 2 cut(s) 519, 534
MspCI CTTAAG 1 cut(s) 961
MspI CCGG 7 cut(s) 177, 254, 554, 558, 900, 1134, 1198
MspR9I CCNGG 4 cut(s) 438, 571, 647, 849
MunI CAATTG 1 cut(s) 904
Mva1269I GAATGC 4 cut(s) 641, 878, 1260, 1543
MvaI CCWGG 4 cut(s) 438, 571, 647, 849
MwoI GCNNNNNNNGC 5 cut(s) 45, 822, 964, 1625, 1961
NcoI CCATGG 1 cut(s) 1875
NdeII GATC 2 cut(s) 952, 1646
NlaIII CATG 8 cut(s) 810, 816, 894, 1035, 1681, 1688, 1841, 1879
NmeAIII GCCGAG 1 cut(s) 1807
NmuCI GTSAC 3 cut(s) 197, 942, 1751
NsiI ATGCAT 1 cut(s) 643
NspI RCATGY 2 cut(s) 894, 1688
OliI CACNNNNGTG 1 cut(s) 1464
PaeR7I CTCGAG 1 cut(s) 444
PciI ACATGT 2 cut(s) 890, 1684
PcsI WCGNNNNNNNCGW 2 cut(s) 615, 717
PctI GAATGC 4 cut(s) 641, 878, 1260, 1543
PdmI GAANNNNTTC 3 cut(s) 392, 1088, 1444
PfeI GAWTC 2 cut(s) 173, 791
PflFI GACNNNGTC 1 cut(s) 713
PinAI ACCGGT 1 cut(s) 1197
PkrI GCNGC 4 cut(s) 360, 463, 521, 536
PleI GAGTC 1 cut(s) 1326
PpsI GAGTC 1 cut(s) 1326
PpuMI RGGWCCY 1 cut(s) 924
PscI ACATGT 2 cut(s) 890, 1684
PshBI ATTAAT 2 cut(s) 918, 1329
PsiI TTATAA 1 cut(s) 596
Psp1406I AACGTT 2 cut(s) 431, 1969
Psp5II RGGWCCY 1 cut(s) 924
Psp6I CCWGG 4 cut(s) 436, 569, 645, 847
PspGI CCWGG 4 cut(s) 436, 569, 645, 847
PspPI GGNCC 6 cut(s) 440, 587, 803, 924, 1231, 1711
PspPPI RGGWCCY 1 cut(s) 924
PspXI VCTCGAGB 1 cut(s) 444
PstI CTGCAG 1 cut(s) 360
PstNI CAGNNNCTG 2 cut(s) 537, 1811
PsuI RGATCY 1 cut(s) 1646
PsyI GACNNNGTC 1 cut(s) 713
PvuII CAGCTG 2 cut(s) 519, 534
RsaI GTAC 5 cut(s) 261, 491, 723, 1240, 2172
RsaNI GTAC 5 cut(s) 260, 490, 722, 1239, 2171
RseI CAYNNNNRTG 6 cut(s) 401, 811, 889, 1365, 1464, 1689
SalI GTCGAC 1 cut(s) 249
SatI GCNGC 4 cut(s) 359, 462, 520, 535
Sau3AI GATC 2 cut(s) 952, 1646
Sau96I GGNCC 6 cut(s) 440, 587, 803, 924, 1231, 1711
SchI GAGTC 1 cut(s) 1327
ScrFI CCNGG 4 cut(s) 438, 571, 647, 849
SduI GDGCHC 3 cut(s) 284, 780, 1531
SfaNI GCATC 4 cut(s) 80, 556, 1548, 1897
SfcI CTRYAG 2 cut(s) 49, 356
Sfr274I CTCGAG 1 cut(s) 444
SinI GGWCC 5 cut(s) 440, 587, 803, 924, 1711
SlaI CTCGAG 1 cut(s) 444
SmiMI CAYNNNNRTG 6 cut(s) 401, 811, 889, 1365, 1464, 1689
SmlI CTYRAG 4 cut(s) 275, 444, 961, 1642
SmoI CTYRAG 4 cut(s) 275, 444, 961, 1642
SsiI CCGC 4 cut(s) 369, 411, 522, 1949
SspI AATATT 2 cut(s) 192, 916
SspMI CTAG 3 cut(s) 1208, 1731, 1853
StyD4I CCNGG 4 cut(s) 436, 569, 645, 847
StyI CCWWGG 2 cut(s) 1234, 1875
TaaI ACNGT 6 cut(s) 225, 494, 726, 1125, 1243, 1463
TaiI ACGT 7 cut(s) 32, 434, 671, 944, 949, 1758, 1972
TaqI TCGA 6 cut(s) 250, 445, 1515, 1556, 1573, 2064
TaqII GACCGA 1 cut(s) 2120
TatI WGTACW 2 cut(s) 489, 2170
TfiI GAWTC 2 cut(s) 173, 791
TscAI CASTG 2 cut(s) 408, 1003
TseFI GTSAC 3 cut(s) 197, 942, 1751
TseI GCWGC 4 cut(s) 358, 461, 519, 534
Tsp45I GTSAC 3 cut(s) 197, 942, 1751
TspGWI ACGGA 2 cut(s) 167, 1452
TspRI CASTG 2 cut(s) 408, 1003
Tth111I GACNNNGTC 1 cut(s) 713
Vha464I CTTAAG 1 cut(s) 961
VneI GTGCAC 1 cut(s) 776
VpaK11BI GGWCC 5 cut(s) 440, 587, 803, 924, 1711
VspI ATTAAT 2 cut(s) 918, 1329
XapI RAATTY 4 cut(s) 1215, 1424, 1885, 2034
XbaI TCTAGA 1 cut(s) 1207
XceI RCATGY 2 cut(s) 894, 1688
XcmI CCANNNNNNNNNTGG 1 cut(s) 369
XhoI CTCGAG 1 cut(s) 444
XmiI GTMKAC 1 cut(s) 250
XmnI GAANNNNTTC 3 cut(s) 392, 1088, 1444
XspI CTAG 3 cut(s) 1208, 1731, 1853
Zsp2I ATGCAT 1 cut(s) 643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.