Rmu_sc0001552.1_g000008

Wall-associated receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001552.1
OG0000052
Physical Location & Seq
Forward (+)
25079 .. 30224
5146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001552.1_g000008.1.cds

Sequence Viewer

Length: 2580 bp
atggctgtgcacgggaggatgctagttatgcaactgatcatagcggtggccatagcagcagcagcagctgatcgaaccccacctcctcaagcgcaacctaactgccccgaccactgtggtaatctcacaatcccatatcctttcggcatcgggcagggttgttcccagcgaggatggttcaacctcacttgtaacgaatccaccgaacccccaacaacacactggggcgatggtagtttcacggttactaacatatcgctcgctgaaggtgagttgcaggttatgaatcatagagcctatgattgttatgatcggcagggtaatcaaacagaaggcatgtacaatatcccttctgtccagttggtacctcctttcaccatctcctggaccagaaacaagcttattgctgttggctgcgacacttgggcaattttcgaagggtaccgcccttacccccatgacgaagaaaggtacatcacaggatgcatgtctgtatgtgacagtcttgacagtgcagttaacgattcgtgctccggcattgggtgttgccaaatttccatccctagtggattcgaaaatctcacagtgagattggatagctactttgaccataaggacgtatggaaattcaacccatgcagctacgccttcattgtggaagaagaaaagttcacattcaaccctaaaacaagttttgaagaactcaacgacactgaaaaacttcccatgattattaactggaatattaatgaagggtcatgtgctctagctcaaaacagccctggttatgcttgcaaagcaaaaagcagctgtgtcaatcggaccatcgataaccagactgaaccaattggttattattgccagtgcttgccaggcttcgaagggaacccatatctcccagatggttgccaagatattgacgagtgcatggctccatcaagtccctgcaacaatggaatatgccaaaattcacctggaggttacagctgtttatgtaacaaaggtttcaaaaaccaggacccaaagagttgcataaaaaacactcccgtgtcaaagaacaagcccttgaaaatttcgttgggtttgagcttgagccttggactcttattgttgcttgttggtgtatggtttggatacaaactcctaaagaaaaagaatgagataaaacgaaaaaagatgttcttcaagcgaaatggtggtttattattagaacaacaattatcgtcaggtgaagttaatgttgagaaaattaaattgttcaaatcacaagagttagagaagtctactgataattttaatgtggatagaattcttggccaaggaggtcaaggtactgtatacaaaggcatgttggaggacgggagaattgttgctgtgaagaagtctaaaatagttgatgaaagccaactttcagaattcatcaatgaggttgtcattctttcccaaattaaccatagaaatgtggttcaactattgggttgttgtttagagacagaagttcctcttttggtttatgaatttataccaaatggaactctttccaagtatatcacagaccaggttgaagactttccactcacatggaaaatgcgcttacgaattgccacagaaattgcaggagctctctcgtacttacattgtacagcttcctttccaatttatcatagagatatcaagtctacaaacatactcttagatgataaatacagagcaaaagttgctgactttggaacttcaaggtcaattgctattgaccaaactcacctaaccacatcacttgtacatggcacattcggttacttggaccctgaatactttcagtcaagtcaatttacagagaaaagtgatgtgtatagctttggggttgttcttgttgagctcttaacaggacaaaaaccaatttcttttctaaggtcggaggatgaaggcagaagtcttgccacatatttcattaattccatgtacaaagatcgtctatttgaaattatttctgctcaagttttgaaggaaggatcgagagcagatatcataatagtggcaaaccttgcaagaagatgtctgaatttgaacggaaggaagcgccctacaatgagagagatcacagctgagctagaagtgattcaaatgacagaaaagacttcaaatggtgaacaaaactatgaagaggttgaatttgtcagaactgaattagtcgagccattggatattgcttcaagttcaagttcaatgggaacaggatcagctttggatgttggtcgggtttcatcattccatgaaatccccctattatctttcaagtcaagtaaggcacgcaagcaacatggcccaggcggggaggacaatgaaggttcttctcgcggtgtaggtgatgagggttcttcttgctgtggtccaagtggtgctgggcctcccggagaaaatgtgggtcacaaggattttggtgctgaagaatacgagttactagagattccccaatcacagcatgggcgattgctagtggcgcccgacgatatgcctattgaccaatcggggtcgagtatgaccgaggagcagattgttgagaggtggggagttctttag

Protein Analysis

859

Amino Acids

95.14

Weight (kDa)

5.21

Isoelectric Point (pI)

41.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 268
Acc65I GGTACC 2 cut(s) 364, 441
AccB1I GGYRCC 3 cut(s) 364, 441, 2500
AccB7I CCANNNNNTGG 1 cut(s) 384
AccI GTMKAC 3 cut(s) 1283, 1338, 1679
AccII CGCG 1 cut(s) 2358
AciI CCGC 4 cut(s) 44, 445, 2331, 2358
AclWI GGATC 2 cut(s) 2020, 2245
AcoI YGGCCR 2 cut(s) 48, 1315
AcsI RAATTY 9 cut(s) 552, 626, 967, 1071, 1308, 1415, 1517, 2062, 2171
AcuI CTGAAG 2 cut(s) 285, 2466
AcyI GRCGYC 1 cut(s) 2501
AfaI GTAC 9 cut(s) 341, 366, 443, 473, 1333, 1631, 1642, 1782, 1964
AfiI CCNNNNNNNGG 3 cut(s) 384, 540, 2332
AjnI CCWGG 7 cut(s) 383, 781, 871, 973, 1014, 1557, 2326
AjuI GAANNNNNNNTTGG 2 cut(s) 1061, 1093
AleI CACNNNNGTG 1 cut(s) 1046
AloI GAACNNNNNNTCC 2 cut(s) 67, 99
Alw21I GWGCWC 5 cut(s) 12, 533, 766, 1624, 1881
Alw26I GTCTC 1 cut(s) 1484
Alw44I GTGCAC 1 cut(s) 8
AlwI GGATC 2 cut(s) 2020, 2245
AlwNI CAGNNNCTG 1 cut(s) 68
AoxI GGCC 4 cut(s) 48, 1315, 2323, 2405
ApaLI GTGCAC 1 cut(s) 8
ApeKI GCWGC 7 cut(s) 56, 59, 62, 65, 414, 639, 807
ApoI RAATTY 9 cut(s) 552, 626, 967, 1071, 1308, 1415, 1517, 2062, 2171
AseI ATTAAT 2 cut(s) 747, 1953
Asp700I GAANNNNTTC 5 cut(s) 720, 1537, 1569, 1815, 2118
Asp718I GGTACC 2 cut(s) 364, 441
AspLEI GCGC 4 cut(s) 94, 1593, 2082, 2503
AspS9I GGNCC 7 cut(s) 387, 822, 1018, 1804, 2324, 2390, 2405
AsuC2I CCSGG 1 cut(s) 2412
AsuHPI GGTGA 7 cut(s) 281, 367, 963, 1241, 1754, 2159, 2378
AsuII TTCGAA 3 cut(s) 435, 573, 879
AvaII GGWCC 5 cut(s) 387, 822, 1018, 1804, 2390
BaeGI GKGCMC 1 cut(s) 12
BalI TGGCCA 2 cut(s) 50, 1317
BanI GGYRCC 3 cut(s) 364, 441, 2500
BanII GRGCYC 2 cut(s) 1624, 1881
BbsI GAAGAC 1 cut(s) 1572
Bbv12I GWGCWC 5 cut(s) 12, 533, 766, 1624, 1881
BbvI GCAGC 7 cut(s) 68, 71, 74, 77, 401, 651, 819
BccI CCATC 7 cut(s) 168, 224, 386, 566, 833, 896, 943
BciT130I CCWGG 7 cut(s) 385, 783, 873, 975, 1016, 1559, 2328
BciVI GTATCC 1 cut(s) 1127
BclI TGATCA 1 cut(s) 36
BcnI CCSGG 1 cut(s) 2412
BcoDI GTCTC 1 cut(s) 1484
BfaI CTAG 6 cut(s) 23, 564, 767, 2111, 2462, 2495
BfoI RGCGCY 2 cut(s) 2083, 2504
BfuAI ACCTGC 1 cut(s) 268
BfuI GTATCC 1 cut(s) 1127
BisI GCNGC 7 cut(s) 57, 60, 63, 66, 415, 640, 808
BlpI GCTNAGC 1 cut(s) 2106
BlsI GCNGC 7 cut(s) 58, 61, 64, 67, 416, 641, 809
Bme1390I CCNGG 8 cut(s) 385, 783, 873, 975, 1016, 1559, 2328, 2412
Bme18I GGWCC 5 cut(s) 387, 822, 1018, 1804, 2390
BmgT120I GGNCC 7 cut(s) 387, 822, 1018, 1804, 2324, 2390, 2405
BmiI GGNNCC 7 cut(s) 366, 443, 887, 933, 1020, 1806, 2502
BmrFI CCNGG 8 cut(s) 385, 783, 873, 975, 1016, 1559, 2328, 2412
BmrI ACTGGG 1 cut(s) 232
BmsI GCATC 3 cut(s) 9, 156, 473
BmuI ACTGGG 1 cut(s) 232
BpiI GAAGAC 1 cut(s) 1572
BpmI CTGGAG 1 cut(s) 996
Bpu1102I GCTNAGC 1 cut(s) 2106
Bpu14I TTCGAA 3 cut(s) 435, 573, 879
BpuEI CTTGAG 3 cut(s) 72, 1111, 1980
BpuMI CCSGG 1 cut(s) 2412
Bsa29I ATCGAT 1 cut(s) 828
BsaHI GRCGYC 1 cut(s) 2501
BsaJI CCNNGG 5 cut(s) 781, 1096, 1318, 2326, 2544
BsaXI ACNNNNNCTCC 4 cut(s) 67, 97, 2406, 2436
Bsc4I CCNNNNNNNGG 3 cut(s) 384, 540, 2332
Bse1I ACTGG 4 cut(s) 227, 358, 743, 862
BseBI CCWGG 7 cut(s) 385, 783, 873, 975, 1016, 1559, 2328
BseCI ATCGAT 1 cut(s) 828
BseDI CCNNGG 5 cut(s) 781, 1096, 1318, 2326, 2544
BseGI GGATG 6 cut(s) 24, 179, 488, 558, 1927, 2254
BseLI CCNNNNNNNGG 3 cut(s) 384, 540, 2332
BseMII CTCAG 1 cut(s) 2097
BseNI ACTGG 4 cut(s) 227, 358, 743, 862
BseRI GAGGAG 2 cut(s) 75, 2561
BseSI GKGCMC 1 cut(s) 12
BseXI GCAGC 7 cut(s) 68, 71, 74, 77, 401, 651, 819
BseYI CCCAGC 2 cut(s) 165, 2402
BsgI GTGCAG 1 cut(s) 534
Bsh1236I CGCG 1 cut(s) 2358
BshFI GGCC 4 cut(s) 50, 1317, 2325, 2407
BshNI GGYRCC 3 cut(s) 364, 441, 2500
BshVI ATCGAT 1 cut(s) 828
BsiHKAI GWGCWC 5 cut(s) 12, 533, 766, 1624, 1881
BsiSI CCGG 2 cut(s) 534, 2412
BslFI GGGAC 1 cut(s) 927
BslI CCNNNNNNNGG 3 cut(s) 384, 540, 2332
BsmAI GTCTC 1 cut(s) 1484
BsmFI GGGAC 1 cut(s) 927
BsnI GGCC 4 cut(s) 50, 1317, 2325, 2407
Bsp119I TTCGAA 3 cut(s) 435, 573, 879
Bsp1286I GDGCHC 5 cut(s) 12, 533, 766, 1624, 1881
Bsp1407I TGTACA 4 cut(s) 339, 1640, 1780, 1962
Bsp143I GATC 7 cut(s) 36, 70, 310, 1969, 2012, 2097, 2237
Bsp1720I GCTNAGC 1 cut(s) 2106
BspACI CCGC 4 cut(s) 44, 445, 2331, 2358
BspANI GGCC 4 cut(s) 50, 1317, 2325, 2407
BspCNI CTCAG 1 cut(s) 2098
BspDI ATCGAT 1 cut(s) 828
BspFNI CGCG 1 cut(s) 2358
BspLI GGNNCC 7 cut(s) 366, 443, 887, 933, 1020, 1806, 2502
BspMI ACCTGC 1 cut(s) 268
BspPI GGATC 2 cut(s) 2020, 2245
BspT104I TTCGAA 3 cut(s) 435, 573, 879
BspT107I GGYRCC 3 cut(s) 364, 441, 2500
BsrGI TGTACA 4 cut(s) 339, 1640, 1780, 1962
BsrI ACTGG 4 cut(s) 227, 358, 743, 862
BssECI CCNNGG 5 cut(s) 781, 1096, 1318, 2326, 2544
BssMI GATC 7 cut(s) 36, 70, 310, 1969, 2012, 2097, 2237
BssNAI GTATAC 1 cut(s) 1339
BssNI GRCGYC 1 cut(s) 2501
BssT1I CCWWGG 2 cut(s) 1096, 1318
Bst1107I GTATAC 1 cut(s) 1339
Bst2UI CCWGG 7 cut(s) 385, 783, 873, 975, 1016, 1559, 2328
Bst4CI ACNGT 6 cut(s) 116, 244, 503, 512, 586, 1336
Bst6I CTCTTC 1 cut(s) 2157
BstACI GRCGYC 1 cut(s) 2501
BstAPI GCANNNNNTGC 2 cut(s) 1718, 2045
BstAUI TGTACA 4 cut(s) 339, 1640, 1780, 1962
BstBI TTCGAA 3 cut(s) 435, 573, 879
BstC8I GCNNGC 5 cut(s) 261, 793, 869, 2311, 2315
BstDEI CTNAG 3 cut(s) 1693, 1910, 2106
BstF5I GGATG 6 cut(s) 24, 179, 488, 558, 1927, 2254
BstFNI CGCG 1 cut(s) 2358
BstH2I RGCGCY 2 cut(s) 2083, 2504
BstHHI GCGC 4 cut(s) 94, 1593, 2082, 2503
BstKTI GATC 7 cut(s) 39, 73, 313, 1972, 2015, 2100, 2240
BstMAI GTCTC 1 cut(s) 1484
BstMBI GATC 7 cut(s) 36, 70, 310, 1969, 2012, 2097, 2237
BstMWI GCNNNNNNNGC 9 cut(s) 28, 56, 62, 65, 797, 873, 1718, 2045, 2500
BstNI CCWGG 7 cut(s) 385, 783, 873, 975, 1016, 1559, 2328
BstNSI RCATGY 3 cut(s) 340, 490, 1351
BstSCI CCNGG 8 cut(s) 383, 781, 871, 973, 1014, 1557, 2326, 2410
BstSLI GKGCMC 1 cut(s) 12
BstUI CGCG 1 cut(s) 2358
BstV1I GCAGC 7 cut(s) 68, 71, 74, 77, 401, 651, 819
BstV2I GAAGAC 1 cut(s) 1572
BstXI CCANNNNNNTGG 1 cut(s) 1581
BstZ17I GTATAC 1 cut(s) 1339
Bsu15I ATCGAT 1 cut(s) 828
BsuI GTATCC 1 cut(s) 1127
BsuRI GGCC 4 cut(s) 50, 1317, 2325, 2407
BsuTUI ATCGAT 1 cut(s) 828
BtgZI GCGATG 1 cut(s) 243
BtsCI GGATG 6 cut(s) 24, 179, 488, 558, 1927, 2254
BtsIMutI CAGTG 6 cut(s) 112, 220, 517, 591, 711, 869
BveI ACCTGC 1 cut(s) 268
Cac8I GCNNGC 5 cut(s) 261, 793, 869, 2311, 2315
CaiI CAGNNNCTG 1 cut(s) 68
CfoI GCGC 4 cut(s) 94, 1593, 2082, 2503
Cfr13I GGNCC 7 cut(s) 387, 822, 1018, 1804, 2324, 2390, 2405
ClaI ATCGAT 1 cut(s) 828
CsiI ACCWGGT 1 cut(s) 1557
Csp6I GTAC 9 cut(s) 340, 365, 442, 472, 1332, 1630, 1641, 1781, 1963
CspCI CAANNNNNGTGG 4 cut(s) 1594, 1629, 1759, 1794
CviQI GTAC 9 cut(s) 340, 365, 442, 472, 1332, 1630, 1641, 1781, 1963
DdeI CTNAG 3 cut(s) 1693, 1910, 2106
DinI GGCGCC 1 cut(s) 2502
DpnI GATC 7 cut(s) 38, 72, 312, 1971, 2014, 2099, 2239
DpnII GATC 7 cut(s) 36, 70, 310, 1969, 2012, 2097, 2237
EaeI YGGCCR 2 cut(s) 48, 1315
Eam1104I CTCTTC 1 cut(s) 2157
EarI CTCTTC 1 cut(s) 2157
Ecl136II GAGCTC 2 cut(s) 1622, 1879
Eco130I CCWWGG 2 cut(s) 1096, 1318
Eco24I GRGCYC 2 cut(s) 1624, 1881
Eco32I GATATC 2 cut(s) 1672, 2026
Eco47I GGWCC 5 cut(s) 387, 822, 1018, 1804, 2390
Eco53kI GAGCTC 2 cut(s) 1622, 1879
Eco57I CTGAAG 2 cut(s) 285, 2466
EcoICRI GAGCTC 2 cut(s) 1622, 1879
EcoO109I RGGNCCY 1 cut(s) 1018
EcoRI GAATTC 2 cut(s) 1308, 1415
EcoRII CCWGG 7 cut(s) 383, 781, 871, 973, 1014, 1557, 2326
EcoRV GATATC 2 cut(s) 1672, 2026
EcoT14I CCWWGG 2 cut(s) 1096, 1318
EcoT22I ATGCAT 1 cut(s) 488
EcoT38I GRGCYC 2 cut(s) 1624, 1881
EgeI GGCGCC 1 cut(s) 2502
EheI GGCGCC 1 cut(s) 2502
ErhI CCWWGG 2 cut(s) 1096, 1318
FalI AAGNNNNNCTT 4 cut(s) 1166, 1198, 1488, 1520
FaqI GGGAC 1 cut(s) 927
FauI CCCGC 1 cut(s) 2324
FbaI TGATCA 1 cut(s) 36
FblI GTMKAC 3 cut(s) 1283, 1338, 1679
Fnu4HI GCNGC 7 cut(s) 57, 60, 63, 66, 415, 640, 808
FokI GGATG 6 cut(s) 31, 186, 495, 545, 1934, 2261
FriOI GRGCYC 2 cut(s) 1624, 1881
Fsp4HI GCNGC 7 cut(s) 57, 60, 63, 66, 415, 640, 808
FspBI CTAG 6 cut(s) 23, 564, 767, 2111, 2462, 2495
GlaI GCGC 4 cut(s) 93, 1592, 2081, 2502
GluI GCNGC 7 cut(s) 57, 60, 63, 66, 415, 640, 808
GsaI CCCAGC 2 cut(s) 169, 2406
GsuI CTGGAG 1 cut(s) 996
HaeII RGCGCY 2 cut(s) 2083, 2504
HaeIII GGCC 4 cut(s) 50, 1317, 2325, 2407
HapII CCGG 2 cut(s) 534, 2412
HhaI GCGC 4 cut(s) 94, 1593, 2082, 2503
Hin1I GRCGYC 1 cut(s) 2501
Hin6I GCGC 4 cut(s) 92, 1591, 2080, 2501
HinP1I GCGC 4 cut(s) 92, 1591, 2080, 2501
HincII GTYRAC 1 cut(s) 520
HindII GTYRAC 1 cut(s) 520
HindIII AAGCTT 1 cut(s) 398
HinfI GANTC 7 cut(s) 197, 286, 524, 570, 1101, 2119, 2467
HpaI GTTAAC 1 cut(s) 520
HpaII CCGG 2 cut(s) 534, 2412
HphI GGTGA 7 cut(s) 281, 367, 963, 1241, 1754, 2159, 2378
Hpy166II GTNNAC 7 cut(s) 10, 520, 672, 1284, 1339, 1680, 2150
Hpy188I TCNGA 5 cut(s) 822, 1414, 1918, 2061, 2180
Hpy188III TCNNGA 2 cut(s) 506, 2016
Hpy8I GTNNAC 7 cut(s) 10, 520, 672, 1284, 1339, 1680, 2150
Hpy99I CGWCG 1 cut(s) 2510
HpyCH4III ACNGT 6 cut(s) 116, 244, 503, 512, 586, 1336
HpyCH4IV ACGT 1 cut(s) 618
HpyF10VI GCNNNNNNNGC 9 cut(s) 28, 56, 62, 65, 797, 873, 1718, 2045, 2500
HpyF3I CTNAG 3 cut(s) 1693, 1910, 2106
HpySE526I ACGT 1 cut(s) 618
Hsp92I GRCGYC 1 cut(s) 2501
HspAI GCGC 4 cut(s) 92, 1591, 2080, 2501
KasI GGCGCC 1 cut(s) 2500
KpnI GGTACC 2 cut(s) 368, 445
Ksp22I TGATCA 1 cut(s) 36
KspAI GTTAAC 1 cut(s) 520
Kzo9I GATC 7 cut(s) 36, 70, 310, 1969, 2012, 2097, 2237
LmnI GCTCC 4 cut(s) 536, 937, 1619, 2548
Lsp1109I GCAGC 7 cut(s) 68, 71, 74, 77, 401, 651, 819
LweI GCATC 3 cut(s) 9, 156, 473
MabI ACCWGGT 1 cut(s) 1557
MaeI CTAG 6 cut(s) 23, 564, 767, 2111, 2462, 2495
MaeII ACGT 1 cut(s) 618
MaeIII GTNAC 8 cut(s) 191, 244, 497, 980, 995, 1796, 2426, 2457
MalI GATC 7 cut(s) 38, 72, 312, 1971, 2014, 2099, 2239
MboI GATC 7 cut(s) 36, 70, 310, 1969, 2012, 2097, 2237
MfeI CAATTG 2 cut(s) 846, 1743
MhlI GDGCHC 5 cut(s) 12, 533, 766, 1624, 1881
MlsI TGGCCA 2 cut(s) 50, 1317
MluNI TGGCCA 2 cut(s) 50, 1317
Mly113I GGCGCC 1 cut(s) 2501
MlyI GAGTC 1 cut(s) 1095
MmeI TCCRAC 2 cut(s) 1332, 1896
Mox20I TGGCCA 2 cut(s) 50, 1317
Mph1103I ATGCAT 1 cut(s) 488
MroXI GAANNNNTTC 5 cut(s) 720, 1537, 1569, 1815, 2118
MscI TGGCCA 2 cut(s) 50, 1317
MseI TTAA 9 cut(s) 519, 735, 747, 1236, 1251, 1296, 1449, 1883, 1953
MslI CAYNNNNRTG 5 cut(s) 44, 1046, 1458, 1579, 2033
Msp20I TGGCCA 2 cut(s) 50, 1317
MspA1I CMGCKG 4 cut(s) 68, 810, 987, 2105
MspI CCGG 2 cut(s) 534, 2412
MspR9I CCNGG 8 cut(s) 385, 783, 873, 975, 1016, 1559, 2328, 2412
MunI CAATTG 2 cut(s) 846, 1743
MvaI CCWGG 7 cut(s) 385, 783, 873, 975, 1016, 1559, 2328
MvnI CGCG 1 cut(s) 2358
MwoI GCNNNNNNNGC 9 cut(s) 28, 56, 62, 65, 797, 873, 1718, 2045, 2500
NarI GGCGCC 1 cut(s) 2501
NciI CCSGG 1 cut(s) 2412
NdeII GATC 7 cut(s) 36, 70, 310, 1969, 2012, 2097, 2237
NlaIV GGNNCC 7 cut(s) 366, 443, 887, 933, 1020, 1806, 2502
NmuCI GTSAC 2 cut(s) 497, 2426
NsiI ATGCAT 1 cut(s) 488
NspI RCATGY 3 cut(s) 340, 490, 1351
NspV TTCGAA 3 cut(s) 435, 573, 879
OliI CACNNNNGTG 1 cut(s) 1046
PcsI WCGNNNNNNNCGW 1 cut(s) 201
PdmI GAANNNNTTC 5 cut(s) 720, 1537, 1569, 1815, 2118
PfeI GAWTC 6 cut(s) 197, 286, 524, 570, 2119, 2467
PflMI CCANNNNNTGG 1 cut(s) 384
PfoI TCCNGGA 2 cut(s) 383, 2410
PkrI GCNGC 7 cut(s) 58, 61, 64, 67, 416, 641, 809
PleI GAGTC 1 cut(s) 1095
PluTI GGCGCC 1 cut(s) 2504
PpsI GAGTC 1 cut(s) 1095
PpuMI RGGWCCY 1 cut(s) 1018
PshBI ATTAAT 2 cut(s) 747, 1953
Psp124BI GAGCTC 2 cut(s) 1624, 1881
Psp5II RGGWCCY 1 cut(s) 1018
Psp6I CCWGG 7 cut(s) 383, 781, 871, 973, 1014, 1557, 2326
PspFI CCCAGC 2 cut(s) 165, 2402
PspGI CCWGG 7 cut(s) 383, 781, 871, 973, 1014, 1557, 2326
PspN4I GGNNCC 7 cut(s) 366, 443, 887, 933, 1020, 1806, 2502
PspPI GGNCC 7 cut(s) 387, 822, 1018, 1804, 2324, 2390, 2405
PspPPI RGGWCCY 1 cut(s) 1018
PstNI CAGNNNCTG 1 cut(s) 68
PvuII CAGCTG 4 cut(s) 68, 810, 987, 2105
RsaI GTAC 9 cut(s) 341, 366, 443, 473, 1333, 1631, 1642, 1782, 1964
RsaNI GTAC 9 cut(s) 340, 365, 442, 472, 1332, 1630, 1641, 1781, 1963
RseI CAYNNNNRTG 5 cut(s) 44, 1046, 1458, 1579, 2033
SacI GAGCTC 2 cut(s) 1624, 1881
SaqAI TTAA 9 cut(s) 519, 735, 747, 1236, 1251, 1296, 1449, 1883, 1953
SatI GCNGC 7 cut(s) 57, 60, 63, 66, 415, 640, 808
Sau3AI GATC 7 cut(s) 36, 70, 310, 1969, 2012, 2097, 2237
Sau96I GGNCC 7 cut(s) 387, 822, 1018, 1804, 2324, 2390, 2405
SchI GAGTC 1 cut(s) 1095
ScrFI CCNGG 8 cut(s) 385, 783, 873, 975, 1016, 1559, 2328, 2412
SduI GDGCHC 5 cut(s) 12, 533, 766, 1624, 1881
SexAI ACCWGGT 1 cut(s) 1557
SfaNI GCATC 3 cut(s) 9, 156, 473
SfoI GGCGCC 1 cut(s) 2502
SfuI TTCGAA 3 cut(s) 435, 573, 879
SinI GGWCC 5 cut(s) 387, 822, 1018, 1804, 2390
SmiMI CAYNNNNRTG 5 cut(s) 44, 1046, 1458, 1579, 2033
SmlI CTYRAG 3 cut(s) 87, 1090, 1995
SmoI CTYRAG 3 cut(s) 87, 1090, 1995
SsiI CCGC 4 cut(s) 44, 445, 2331, 2358
SspDI GGCGCC 1 cut(s) 2500
SspI AATATT 1 cut(s) 745
SspMI CTAG 6 cut(s) 23, 564, 767, 2111, 2462, 2495
SstI GAGCTC 2 cut(s) 1624, 1881
StyD4I CCNGG 8 cut(s) 383, 781, 871, 973, 1014, 1557, 2326, 2410
StyI CCWWGG 2 cut(s) 1096, 1318
TaaI ACNGT 6 cut(s) 116, 244, 503, 512, 586, 1336
TaiI ACGT 1 cut(s) 621
TaqI TCGA 8 cut(s) 73, 435, 573, 828, 879, 2015, 2193, 2534
TaqII GACCGA 1 cut(s) 2558
TatI WGTACW 4 cut(s) 339, 1640, 1780, 1962
TfiI GAWTC 6 cut(s) 197, 286, 524, 570, 2119, 2467
Tru1I TTAA 9 cut(s) 519, 735, 747, 1236, 1251, 1296, 1449, 1883, 1953
Tru9I TTAA 9 cut(s) 519, 735, 747, 1236, 1251, 1296, 1449, 1883, 1953
TscAI CASTG 6 cut(s) 119, 227, 517, 591, 718, 869
TseFI GTSAC 2 cut(s) 497, 2426
TseI GCWGC 7 cut(s) 56, 59, 62, 65, 414, 639, 807
Tsp45I GTSAC 2 cut(s) 497, 2426
TspGWI ACGGA 1 cut(s) 2085
TspRI CASTG 6 cut(s) 119, 227, 517, 591, 718, 869
Van91I CCANNNNNTGG 1 cut(s) 384
VneI GTGCAC 1 cut(s) 8
VpaK11BI GGWCC 5 cut(s) 387, 822, 1018, 1804, 2390
VspI ATTAAT 2 cut(s) 747, 1953
XapI RAATTY 9 cut(s) 552, 626, 967, 1071, 1308, 1415, 1517, 2062, 2171
XceI RCATGY 3 cut(s) 340, 490, 1351
XcmI CCANNNNNNNNNTGG 3 cut(s) 219, 971, 2480
XmiI GTMKAC 3 cut(s) 1283, 1338, 1679
XmnI GAANNNNTTC 5 cut(s) 720, 1537, 1569, 1815, 2118
XspI CTAG 6 cut(s) 23, 564, 767, 2111, 2462, 2495
Zsp2I ATGCAT 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.