Rmu_ssc0000480.1_g000061

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000480.1
Physical Location & Seq
Forward (+)
304566 .. 305300
735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000480.1_g000061.1.cds

Sequence Viewer

Length: 735 bp
atgaggattttcctcttacaagggaaatgcgattacgagttggtatggaagttgctggagccctttcctacttacattcatctgcttcaatgcccatttaccatcgagacattaagtcttcaaacattctcttggatgataactatagagcaaaagttgcagactctgggacatcaagaactgtttccattgaccaaacacatcttaattaccatgacacatgtaagcagaacatttggttatttggaccctgagtacttccagtctagccaatttacagacaagagcgacgtttatagcttcggagtagtccttgccgaactcttgactggacataaaccagtttctgtaacaagatcgcaggaagggaaacaagatgggagaagcctagcaacacattttattgtgtcgatggaggagggttgtttgtttgatattcttgatgctgaagttatgaagggaggtaagaaagaagagatagtggcggttgctaatcttgcaaaacgttgcttgaatatgaaaggaaagaagcgtccaactatgaaagatatagcagttgagttggagggaattctaatgttaagtaaatcttctgatgtcgaacacatggcagaggttgaacatgtccagacggaaatagccgaggtttgggatgtttctacatcaacaggatctcatgtggacaccggttcttcgttagatggacaaccactgctgtctttcaagtctcgctga

Protein Analysis

244

Amino Acids

27.55

Weight (kDa)

5.6

Isoelectric Point (pI)

50.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 485
AclI AACGTT 1 cut(s) 505
AclWI GGATC 1 cut(s) 679
AcsI RAATTY 1 cut(s) 570
AcuI CTGAAG 1 cut(s) 468
AfaI GTAC 1 cut(s) 257
AfiI CCNNNNNNNGG 1 cut(s) 648
AflIII ACRYGT 2 cut(s) 220, 622
AgeI ACCGGT 1 cut(s) 686
AgsI TTSAA 5 cut(s) 89, 122, 514, 620, 724
AhdI GACNNNNNGTC 1 cut(s) 114
AluBI AGCT 1 cut(s) 300
AluI AGCT 1 cut(s) 300
Alw26I GTCTC 1 cut(s) 101
AlwI GGATC 1 cut(s) 679
AlwNI CAGNNNCTG 2 cut(s) 166, 347
ApoI RAATTY 1 cut(s) 570
AsiGI ACCGGT 1 cut(s) 686
Asp700I GAANNNNTTC 1 cut(s) 183
AspS9I GGNCC 1 cut(s) 247
AvaII GGWCC 1 cut(s) 247
BanII GRGCYC 1 cut(s) 63
BbsI GAAGAC 1 cut(s) 110
BccI CCATC 4 cut(s) 110, 371, 406, 695
BcoDI GTCTC 1 cut(s) 101
BfaI CTAG 2 cut(s) 267, 389
BfmI CTRYAG 1 cut(s) 144
BmcAI AGTACT 1 cut(s) 257
Bme18I GGWCC 1 cut(s) 247
BmeRI GACNNNNNGTC 1 cut(s) 114
BmgT120I GGNCC 1 cut(s) 247
BmiI GGNNCC 2 cut(s) 60, 249
BmsI GCATC 1 cut(s) 433
BpiI GAAGAC 1 cut(s) 110
BpmI CTGGAG 1 cut(s) 77
BsaJI CCNNGG 1 cut(s) 642
BsaWI WCCGGW 1 cut(s) 686
Bsc4I CCNNNNNNNGG 1 cut(s) 648
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 3 cut(s) 262, 334, 341
BseDI CCNNGG 1 cut(s) 642
BseGI GGATG 2 cut(s) 141, 658
BseLI CCNNNNNNNGG 1 cut(s) 648
BseMII CTCAG 1 cut(s) 243
BseNI ACTGG 3 cut(s) 262, 334, 341
BseRI GAGGAG 1 cut(s) 431
BshTI ACCGGT 1 cut(s) 686
BsiSI CCGG 1 cut(s) 687
BslFI GGGAC 1 cut(s) 183
BslI CCNNNNNNNGG 1 cut(s) 648
BsmAI GTCTC 1 cut(s) 101
BsmFI GGGAC 1 cut(s) 183
Bsp1286I GDGCHC 1 cut(s) 63
Bsp143I GATC 2 cut(s) 356, 671
BspACI CCGC 1 cut(s) 485
BspCNI CTCAG 1 cut(s) 244
BspLI GGNNCC 2 cut(s) 60, 249
BspPI GGATC 1 cut(s) 679
BsrFI RCCGGY 1 cut(s) 686
BsrI ACTGG 3 cut(s) 262, 334, 341
BssAI RCCGGY 1 cut(s) 686
BssECI CCNNGG 1 cut(s) 642
BssMI GATC 2 cut(s) 356, 671
Bst4CI ACNGT 1 cut(s) 183
Bst6I CTCTTC 1 cut(s) 468
BstAPI GCANNNNNTGC 1 cut(s) 157
BstDEI CTNAG 1 cut(s) 252
BstF5I GGATG 2 cut(s) 141, 658
BstKTI GATC 2 cut(s) 359, 674
BstMAI GTCTC 1 cut(s) 101
BstMBI GATC 2 cut(s) 356, 671
BstMWI GCNNNNNNNGC 2 cut(s) 157, 497
BstNSI RCATGY 2 cut(s) 224, 626
BstSFI CTRYAG 1 cut(s) 144
BstV2I GAAGAC 1 cut(s) 110
BstX2I RGATCY 1 cut(s) 671
BstYI RGATCY 1 cut(s) 671
BtsCI GGATG 2 cut(s) 141, 658
BtsI GCAGTG 1 cut(s) 710
BtsIMutI CAGTG 1 cut(s) 710
CaiI CAGNNNCTG 2 cut(s) 166, 347
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 1 cut(s) 247
CseI GACGC 1 cut(s) 521
Csp6I GTAC 1 cut(s) 256
CspAI ACCGGT 1 cut(s) 686
CviAII CATG 5 cut(s) 214, 221, 607, 623, 677
CviJI RGCY 5 cut(s) 61, 270, 300, 387, 641
CviKI_1 RGCY 5 cut(s) 61, 270, 300, 387, 641
CviQI GTAC 1 cut(s) 256
DdeI CTNAG 1 cut(s) 252
DpnI GATC 2 cut(s) 358, 673
DpnII GATC 2 cut(s) 356, 671
DriI GACNNNNNGTC 1 cut(s) 114
Eam1104I CTCTTC 1 cut(s) 468
Eam1105I GACNNNNNGTC 1 cut(s) 114
EarI CTCTTC 1 cut(s) 468
Eco24I GRGCYC 1 cut(s) 63
Eco47I GGWCC 1 cut(s) 247
Eco57I CTGAAG 1 cut(s) 468
EcoRI GAATTC 1 cut(s) 570
EcoT38I GRGCYC 1 cut(s) 63
FaeI CATG 5 cut(s) 217, 224, 610, 626, 680
FalI AAGNNNNNCTT 2 cut(s) 574, 606
FaqI GGGAC 1 cut(s) 183
FatI CATG 5 cut(s) 213, 220, 606, 622, 676
FokI GGATG 2 cut(s) 148, 665
FriOI GRGCYC 1 cut(s) 63
FspBI CTAG 2 cut(s) 267, 389
GsuI CTGGAG 1 cut(s) 77
HapII CCGG 1 cut(s) 687
HgaI GACGC 1 cut(s) 521
Hin1II CATG 5 cut(s) 217, 224, 610, 626, 680
HinfI GANTC 1 cut(s) 163
HpaII CCGG 1 cut(s) 687
Hpy166II GTNNAC 1 cut(s) 682
Hpy188I TCNGA 2 cut(s) 305, 595
Hpy188III TCNNGA 5 cut(s) 106, 176, 325, 440, 628
Hpy8I GTNNAC 1 cut(s) 682
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 2 cut(s) 359, 451
HpyCH4III ACNGT 1 cut(s) 183
HpyCH4IV ACGT 2 cut(s) 291, 505
HpyCH4V TGCA 2 cut(s) 160, 500
HpyF10VI GCNNNNNNNGC 2 cut(s) 157, 497
HpyF3I CTNAG 1 cut(s) 252
HpySE526I ACGT 2 cut(s) 291, 505
Hsp92II CATG 5 cut(s) 217, 224, 610, 626, 680
Kzo9I GATC 2 cut(s) 356, 671
LmnI GCTCC 1 cut(s) 58
LweI GCATC 1 cut(s) 433
MaeI CTAG 2 cut(s) 267, 389
MaeII ACGT 2 cut(s) 291, 505
MaeIII GTNAC 1 cut(s) 349
MalI GATC 2 cut(s) 358, 673
MboI GATC 2 cut(s) 356, 671
MboII GAAGA 4 cut(s) 110, 485, 582, 684
MflI RGATCY 1 cut(s) 671
MhlI GDGCHC 1 cut(s) 63
MluCI AATT 3 cut(s) 207, 272, 570
MlyI GAGTC 1 cut(s) 157
MmeI TCCRAC 2 cut(s) 543, 560
MnlI CCTC 7 cut(s) 23, 409, 412, 455, 559, 607, 637
MroXI GAANNNNTTC 1 cut(s) 183
MseI TTAA 3 cut(s) 113, 206, 581
MspI CCGG 1 cut(s) 687
MwoI GCNNNNNNNGC 2 cut(s) 157, 497
NdeII GATC 2 cut(s) 356, 671
NlaIII CATG 5 cut(s) 217, 224, 610, 626, 680
NlaIV GGNNCC 2 cut(s) 60, 249
NmeAIII GCCGAG 1 cut(s) 667
NspI RCATGY 2 cut(s) 224, 626
PciI ACATGT 2 cut(s) 220, 622
PdmI GAANNNNTTC 1 cut(s) 183
PinAI ACCGGT 1 cut(s) 686
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
PscI ACATGT 2 cut(s) 220, 622
Psp1406I AACGTT 1 cut(s) 505
PspN4I GGNNCC 2 cut(s) 60, 249
PspPI GGNCC 1 cut(s) 247
PstNI CAGNNNCTG 2 cut(s) 166, 347
PsuI RGATCY 1 cut(s) 671
RsaI GTAC 1 cut(s) 257
RsaNI GTAC 1 cut(s) 256
SaqAI TTAA 3 cut(s) 113, 206, 581
Sau3AI GATC 2 cut(s) 356, 671
Sau96I GGNCC 1 cut(s) 247
ScaI AGTACT 1 cut(s) 257
SchI GAGTC 1 cut(s) 157
SduI GDGCHC 1 cut(s) 63
SetI ASST 6 cut(s) 294, 302, 466, 508, 618, 648
SfaNI GCATC 1 cut(s) 433
SfcI CTRYAG 1 cut(s) 144
SinI GGWCC 1 cut(s) 247
Sse9I AATT 3 cut(s) 207, 272, 570
SsiI CCGC 1 cut(s) 485
SspMI CTAG 2 cut(s) 267, 389
TaaI ACNGT 1 cut(s) 183
TaiI ACGT 2 cut(s) 294, 508
TaqI TCGA 3 cut(s) 105, 410, 600
TasI AATT 3 cut(s) 207, 272, 570
TatI WGTACW 1 cut(s) 255
Tru1I TTAA 3 cut(s) 113, 206, 581
Tru9I TTAA 3 cut(s) 113, 206, 581
TscAI CASTG 1 cut(s) 717
TspDTI ATGAA 4 cut(s) 68, 470, 533, 557
TspGWI ACGGA 1 cut(s) 647
TspRI CASTG 1 cut(s) 717
VpaK11BI GGWCC 1 cut(s) 247
XapI RAATTY 1 cut(s) 570
XceI RCATGY 2 cut(s) 224, 626
XmnI GAANNNNTTC 1 cut(s) 183
XspI CTAG 2 cut(s) 267, 389
ZrmI AGTACT 1 cut(s) 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.