Prupe.3G180600_v2.0.a1

Wall-associated receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000052
Physical Location & Seq
Reverse (-)
19638420 .. 19642616
4197 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G180600.1

Sequence Viewer

Length: 2283 bp
ATGCTGATTCTAAGGCCACTCAGGTTGGCCGGAACGATATTTGTTTTAGCGACACTTGCAACAGCCACCGCAGCAGCAGCTCAAGCCCTGCCTGGATGCCCTGACTATTGTGGTGATCTGAAAGTTCCATACCCATTTGGGACAGTTGAAGGTTGTTACCTGGGAGAAAACTTTTTTATCAACTGTACTAAAAAGAAAAATACCATGACTAGTAACTTCACTCAAATCCCAACAGCATATCTGATGGGAAGTGATAACATTGTTACTAATATATCCCTTGACGGTGAATTGCAAATATTGCAGCGTGCGTCCCATGATTGTTTTTATAATAATGACAAAACGGGTGCGGTATACATCTCCCCCTACTCGGTCTCGTACCCGCTCCAGGTTTCTCCTTTCACCATCTCGGACACCAGAAACAAGTTGGTTTCCGTTGGTTGTGACACTTTTGCAATACTTGAAGGTTACCGGCAGGACGAAGAAAGGTACGAATCGGGGTGCCTGTCCTTATGTCGTAGGCCTGACAGCGTTACCGAGTCTTGCTCTGGCATTGGGTGCTGCACAGCTTCCATCCCTAGTGGACTGAAAAATCGTACTGTGACAGTGAGTAGATATAAAAATGATTCGTATGGAGACTTACGCTGCAGCTACGCCTTCATTGTGGAAGAGAACTATTTCAAATTCTCCAATGCAAGTTTTCTAAAAATGGCGAACACACTTCAGCTTCCAATGGTTATTAACTGGGAAATCGGAGATCAGCCGTGTGCTGCAGCTGAGAAGAGCCACAATTTTTCATGCAAAGCAAATAGCAAATGTATCAACCGGACCAATTCATCTGGTTACTTCTGCATGTGCTTGCCAGGTTATGGAGGGAATCCATACCACCCAGATGGATGCCAAGATATTGATGAGTGTGAGGTCTCAGATCCCTGCAGTGCAGTGTGCTTAAATCTACCTGGAAATTATTCTTGTCTATGTCCAAAAGGGTACAAAGGTGATGGCCTGAAAACTGGATCAGGTTGCATAAAATACAACTCCAGCCAATCTCCTCTCTTGATTAATATTTCACTCGGTATAGGCATTGGTCTTGGGCTGTTATTAGTAATCATTGGTGCATGGTGGTTGCAGAAAGTCGTCAAGAAAAGAAAAGCCATTAAACGCAAGGAGAACTTCTTTAAACAAAATGGTGGTATTTTGCTGGAGCAACAATTATCTTCCGGTGAAGTTAATGTTCAGAAAGCCAAGTTGTTCAAGTTAGAGGAGCTAGAGAAAGCCACTGACCAGTTTAATGTAGACAGAATTCTTGGCCATGGAGGCCAAGGTACCGTCTACAAAGGAATGTTGGTAGATGGAACCATTGTTGCTGTAAAGAAGTCTAAAAATATAGCTAGTGGAGGCAAAGTCAGACAATTCATCAATGAAATTGTCATTCTTTCTCAAATTAACCACAGAAATGTGGTTAAACTTTTGGGTTGTTGTTTAGAGACTGAAGTTCCTCTTTTGGTTTATGAATACATACCCAATGGAACACTTTATCAATATATTCATGACCAAAATGAGGAATTTCCTCTTACCTGGGAAATGCGCTTGAGGATTGCTGTAGAAATTGCAGGAGCTCTGTCCTACTTGCATTCAGCAGCTTCTTTCCCAATTTACCACCGTGACATCAAGTCTACTAATATACTCTTGGATGGCAAATACAGAGCCAGAATAGCAGATTTCGGGACTTCAAGATCAGTTTCAGTTGACCAAACGCACCTCACAACATTAGTACATGGCACATTTGGTTACTTGGACCCAGAGTACTTCCAATCAAGTAAGTTTACAGATAAGAGTGACGTGTATAGCTTCAGAGTGGTTCTTGTTGAGCTCTTGACAGGACAAAAGGCAGTTTCTCTAACGAGCTCACAAGAAGCCAGAGGCCTAGTTCCATATTTCAATAATTCCATGGAGGAGAATAATGTGCTTGATATTTTTGATGCTCAAGTTAAGGAGGAGGGTGCACCGGAAGAGACTTTGGCAGTGGCTAACCTTGCAAAGAGATGCTTGGATATGAACGGAAAAAGACGCCCCACGATGAAAGAAGTGGCAATGGAGTTGGAGGGGATTCAGAAAGCTTCGAATGTGCAACTCAATCTCGAAGCGGCTGAACATGTCCCAAATGTAGTAATTGGTCCTTGGGATGATGCTTTTACATCAACAGATTCAACAGGGTCAGGTTGGGATAGTGGCGCTGCTTCATCAACAGATGTACTATCAATATTATCAGACGAATCAGGATGA

Protein Analysis

761

Amino Acids

83.44

Weight (kDa)

5.8

Isoelectric Point (pI)

35.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 327
Acc65I GGTACC 1 cut(s) 1322
AccB1I GGYRCC 2 cut(s) 498, 1322
AccB7I CCANNNNNTGG 1 cut(s) 866
AccBSI CCGCTC 1 cut(s) 382
AccI GTMKAC 4 cut(s) 351, 1293, 1329, 1673
AciI CCGC 4 cut(s) 69, 347, 380, 2144
AclWI GGATC 2 cut(s) 920, 1021
AcoI YGGCCR 2 cut(s) 27, 1306
AcsI RAATTY 3 cut(s) 680, 1299, 1562
AcuI CTGAAG 3 cut(s) 704, 1509, 1834
AcyI GRCGYC 1 cut(s) 2068
AfaI GTAC 9 cut(s) 187, 377, 488, 595, 989, 1324, 1773, 1805, 2253
AfiI CCNNNNNNNGG 4 cut(s) 367, 385, 866, 1558
AflIII ACRYGT 2 cut(s) 1839, 2152
AgsI TTSAA 7 cut(s) 149, 461, 679, 1252, 1731, 1939, 2208
AhdI GACNNNNNGTC 1 cut(s) 1669
AhlI ACTAGT 1 cut(s) 209
AjiI CACGTC 1 cut(s) 1840
AjnI CCWGG 6 cut(s) 91, 159, 384, 859, 955, 1574
Alw21I GWGCWC 4 cut(s) 1618, 1872, 1907, 2005
Alw26I GTCTC 5 cut(s) 376, 627, 925, 1478, 2006
Alw44I GTGCAC 1 cut(s) 2001
AlwI GGATC 2 cut(s) 920, 1021
AoxI GGCC 7 cut(s) 14, 27, 518, 1000, 1306, 1315, 1921
ApaLI GTGCAC 1 cut(s) 2001
ApoI RAATTY 3 cut(s) 680, 1299, 1562
AseI ATTAAT 1 cut(s) 1059
Asp700I GAANNNNTTC 2 cut(s) 674, 964
Asp718I GGTACC 1 cut(s) 1322
AspLEI GCGC 2 cut(s) 1587, 2234
AspS9I GGNCC 3 cut(s) 825, 1795, 2174
AsuHPI GGTGA 5 cut(s) 125, 296, 391, 1007, 1232
AsuII TTCGAA 1 cut(s) 2120
AvaII GGWCC 3 cut(s) 825, 1795, 2174
BaeGI GKGCMC 1 cut(s) 2005
BaeI ACNNNNGTAYC 2 cut(s) 979, 1012
BalI TGGCCA 1 cut(s) 1308
BanI GGYRCC 2 cut(s) 498, 1322
BanII GRGCYC 3 cut(s) 1618, 1872, 1907
Bbv12I GWGCWC 4 cut(s) 1618, 1872, 1907, 2005
BccI CCATC 7 cut(s) 238, 410, 578, 884, 992, 1343, 1685
BceAI ACGGC 1 cut(s) 745
BciT130I CCWGG 6 cut(s) 93, 161, 386, 861, 957, 1576
BcoDI GTCTC 5 cut(s) 376, 627, 925, 1478, 2006
BcuI ACTAGT 1 cut(s) 209
BfaI CTAG 5 cut(s) 210, 576, 1265, 1389, 1925
BfmI CTRYAG 4 cut(s) 643, 768, 931, 1599
BfoI RGCGCY 1 cut(s) 2235
BglI GCCNNNNNGGC 1 cut(s) 1314
BmcAI AGTACT 1 cut(s) 1805
Bme1390I CCNGG 6 cut(s) 93, 161, 386, 861, 957, 1576
Bme18I GGWCC 3 cut(s) 825, 1795, 2174
BmeRI GACNNNNNGTC 1 cut(s) 1669
BmgBI CACGTC 1 cut(s) 1840
BmgT120I GGNCC 3 cut(s) 825, 1795, 2174
BmiI GGNNCC 4 cut(s) 500, 1324, 1354, 1797
BmrFI CCNGG 6 cut(s) 93, 161, 386, 861, 957, 1576
BmrI ACTGGG 1 cut(s) 751
BmsI GCATC 5 cut(s) 86, 884, 1969, 2033, 2176
BmuI ACTGGG 1 cut(s) 751
BplI GAGNNNNNCTC 2 cut(s) 527, 559
BpmI CTGGAG 3 cut(s) 368, 1021, 1220
Bpu14I TTCGAA 1 cut(s) 2120
BpuEI CTTGAG 3 cut(s) 66, 1609, 1968
BsaHI GRCGYC 1 cut(s) 2068
BsaI GGTCTC 2 cut(s) 376, 925
BsaJI CCNNGG 6 cut(s) 160, 1309, 1318, 1575, 1947, 2177
BsaWI WCCGGW 3 cut(s) 822, 1217, 2005
BsaXI ACNNNNNCTCC 2 cut(s) 1386, 1416
Bsc4I CCNNNNNNNGG 4 cut(s) 367, 385, 866, 1558
Bse118I RCCGGY 1 cut(s) 468
Bse1I ACTGG 3 cut(s) 746, 1015, 1282
Bse3DI GCAATG 1 cut(s) 2097
BseBI CCWGG 6 cut(s) 93, 161, 386, 861, 957, 1576
BseDI CCNNGG 6 cut(s) 160, 1309, 1318, 1575, 1947, 2177
BseGI GGATG 5 cut(s) 101, 570, 899, 1696, 2188
BseLI CCNNNNNNNGG 4 cut(s) 367, 385, 866, 1558
BseMI GCAATG 1 cut(s) 2097
BseMII CTCAG 3 cut(s) 34, 765, 936
BseNI ACTGG 3 cut(s) 746, 1015, 1282
BseRI GAGGAG 4 cut(s) 1038, 1274, 1967, 2009
BseSI GKGCMC 1 cut(s) 2005
BsgI GTGCAG 2 cut(s) 544, 957
BshFI GGCC 7 cut(s) 16, 29, 520, 1002, 1308, 1317, 1923
BshNI GGYRCC 2 cut(s) 498, 1322
BsiHKAI GWGCWC 4 cut(s) 1618, 1872, 1907, 2005
BsiSI CCGG 5 cut(s) 30, 469, 823, 1218, 2006
BslFI GGGAC 4 cut(s) 154, 295, 1738, 2141
BslI CCNNNNNNNGG 4 cut(s) 367, 385, 866, 1558
BsmAI GTCTC 5 cut(s) 376, 627, 925, 1478, 2006
BsmFI GGGAC 4 cut(s) 154, 295, 1738, 2141
BsmI GAATGC 1 cut(s) 1630
BsnI GGCC 7 cut(s) 16, 29, 520, 1002, 1308, 1317, 1923
Bso31I GGTCTC 2 cut(s) 376, 925
Bsp119I TTCGAA 1 cut(s) 2120
Bsp1286I GDGCHC 4 cut(s) 1618, 1872, 1907, 2005
Bsp143I GATC 5 cut(s) 115, 754, 925, 1013, 1733
Bsp19I CCATGG 2 cut(s) 1309, 1947
BspACI CCGC 4 cut(s) 69, 347, 380, 2144
BspANI GGCC 7 cut(s) 16, 29, 520, 1002, 1308, 1317, 1923
BspCNI CTCAG 3 cut(s) 33, 766, 935
BspHI TCATGA 1 cut(s) 1546
BspLI GGNNCC 4 cut(s) 500, 1324, 1354, 1797
BspMAI CTGCAG 3 cut(s) 647, 772, 935
BspPI GGATC 2 cut(s) 920, 1021
BspQI GCTCTTC 1 cut(s) 773
BspT104I TTCGAA 1 cut(s) 2120
BspT107I GGYRCC 2 cut(s) 498, 1322
BspTNI GGTCTC 2 cut(s) 376, 925
BsrBI CCGCTC 1 cut(s) 382
BsrDI GCAATG 1 cut(s) 2097
BsrFI RCCGGY 1 cut(s) 468
BsrI ACTGG 3 cut(s) 746, 1015, 1282
BssAI RCCGGY 1 cut(s) 468
BssECI CCNNGG 6 cut(s) 160, 1309, 1318, 1575, 1947, 2177
BssMI GATC 5 cut(s) 115, 754, 925, 1013, 1733
BssNAI GTATAC 1 cut(s) 352
BssNI GRCGYC 1 cut(s) 2068
BssT1I CCWWGG 4 cut(s) 1309, 1318, 1947, 2177
Bst1107I GTATAC 1 cut(s) 352
Bst2UI CCWGG 6 cut(s) 93, 161, 386, 861, 957, 1576
Bst4CI ACNGT 7 cut(s) 145, 185, 284, 598, 604, 1327, 1661
Bst6I CTCTTC 3 cut(s) 660, 773, 2004
BstACI GRCGYC 1 cut(s) 2068
BstAPI GCANNNNNTGC 2 cut(s) 298, 555
BstBI TTCGAA 1 cut(s) 2120
BstC8I GCNNGC 2 cut(s) 306, 857
BstDEI CTNAG 4 cut(s) 11, 20, 774, 922
BstDSI CCRYGG 2 cut(s) 1309, 1947
BstEII GGTNACC 1 cut(s) 464
BstF5I GGATG 5 cut(s) 101, 570, 899, 1696, 2188
BstH2I RGCGCY 1 cut(s) 2235
BstHHI GCGC 2 cut(s) 1587, 2234
BstKTI GATC 5 cut(s) 118, 757, 928, 1016, 1736
BstMAI GTCTC 5 cut(s) 376, 627, 925, 1478, 2006
BstMBI GATC 5 cut(s) 115, 754, 925, 1013, 1733
BstMWI GCNNNNNNNGC 9 cut(s) 56, 71, 77, 83, 298, 555, 1314, 1712, 2033
BstNI CCWGG 6 cut(s) 93, 161, 386, 861, 957, 1576
BstNSI RCATGY 2 cut(s) 853, 2156
BstPI GGTNACC 1 cut(s) 464
BstSCI CCNGG 6 cut(s) 91, 159, 384, 859, 955, 1574
BstSFI CTRYAG 4 cut(s) 643, 768, 931, 1599
BstSLI GKGCMC 1 cut(s) 2005
BstX2I RGATCY 1 cut(s) 925
BstXI CCANNNNNNTGG 1 cut(s) 890
BstYI RGATCY 1 cut(s) 925
BstZ17I GTATAC 1 cut(s) 352
BsuRI GGCC 7 cut(s) 16, 29, 520, 1002, 1308, 1317, 1923
BtgI CCRYGG 2 cut(s) 1309, 1947
BtrI CACGTC 1 cut(s) 1840
BtsCI GGATG 5 cut(s) 101, 570, 899, 1696, 2188
BtsI GCAGTG 3 cut(s) 940, 945, 2028
BtsIMutI CAGTG 5 cut(s) 609, 940, 945, 1275, 2028
Cac8I GCNNGC 2 cut(s) 306, 857
CciI TCATGA 1 cut(s) 1546
CfoI GCGC 2 cut(s) 1587, 2234
Cfr10I RCCGGY 1 cut(s) 468
Cfr13I GGNCC 3 cut(s) 825, 1795, 2174
CseI GACGC 2 cut(s) 297, 2076
Csp6I GTAC 9 cut(s) 186, 376, 487, 594, 988, 1323, 1772, 1804, 2252
CspCI CAANNNNNGTGG 2 cut(s) 6, 41
CviQI GTAC 9 cut(s) 186, 376, 487, 594, 988, 1323, 1772, 1804, 2252
DdeI CTNAG 4 cut(s) 11, 20, 774, 922
DpnI GATC 5 cut(s) 117, 756, 927, 1015, 1735
DpnII GATC 5 cut(s) 115, 754, 925, 1013, 1733
DraI TTTAAA 1 cut(s) 1177
DriI GACNNNNNGTC 1 cut(s) 1669
EaeI YGGCCR 2 cut(s) 27, 1306
Eam1104I CTCTTC 3 cut(s) 660, 773, 2004
Eam1105I GACNNNNNGTC 1 cut(s) 1669
EarI CTCTTC 3 cut(s) 660, 773, 2004
Ecl136II GAGCTC 3 cut(s) 1616, 1870, 1905
Eco130I CCWWGG 4 cut(s) 1309, 1318, 1947, 2177
Eco147I AGGCCT 2 cut(s) 520, 1923
Eco24I GRGCYC 3 cut(s) 1618, 1872, 1907
Eco31I GGTCTC 2 cut(s) 376, 925
Eco47I GGWCC 3 cut(s) 825, 1795, 2174
Eco53kI GAGCTC 3 cut(s) 1616, 1870, 1905
Eco57I CTGAAG 3 cut(s) 704, 1509, 1834
Eco91I GGTNACC 1 cut(s) 464
EcoICRI GAGCTC 3 cut(s) 1616, 1870, 1905
EcoO65I GGTNACC 1 cut(s) 464
EcoRI GAATTC 1 cut(s) 1299
EcoRII CCWGG 6 cut(s) 91, 159, 384, 859, 955, 1574
EcoT14I CCWWGG 4 cut(s) 1309, 1318, 1947, 2177
EcoT38I GRGCYC 3 cut(s) 1618, 1872, 1907
ErhI CCWWGG 4 cut(s) 1309, 1318, 1947, 2177
FalI AAGNNNNNCTT 6 cut(s) 1154, 1186, 1482, 1514, 2030, 2062
FaqI GGGAC 4 cut(s) 154, 295, 1738, 2141
FauI CCCGC 1 cut(s) 387
FblI GTMKAC 4 cut(s) 351, 1293, 1329, 1673
FokI GGATG 5 cut(s) 108, 557, 906, 1703, 2195
FriOI GRGCYC 3 cut(s) 1618, 1872, 1907
FspBI CTAG 5 cut(s) 210, 576, 1265, 1389, 1925
GlaI GCGC 2 cut(s) 1586, 2233
GsuI CTGGAG 3 cut(s) 368, 1021, 1220
HaeII RGCGCY 1 cut(s) 2235
HaeIII GGCC 7 cut(s) 16, 29, 520, 1002, 1308, 1317, 1923
HapII CCGG 5 cut(s) 30, 469, 823, 1218, 2006
HgaI GACGC 2 cut(s) 297, 2076
HhaI GCGC 2 cut(s) 1587, 2234
Hin1I GRCGYC 1 cut(s) 2068
Hin6I GCGC 2 cut(s) 1585, 2232
HinP1I GCGC 2 cut(s) 1585, 2232
HincII GTYRAC 1 cut(s) 1747
HindII GTYRAC 1 cut(s) 1747
HindIII AAGCTT 1 cut(s) 2115
HinfI GANTC 8 cut(s) 7, 491, 536, 623, 874, 2107, 2204, 2273
HpaII CCGG 5 cut(s) 30, 469, 823, 1218, 2006
HphI GGTGA 5 cut(s) 125, 296, 391, 1007, 1232
Hpy166II GTNNAC 8 cut(s) 352, 581, 1294, 1330, 1674, 1747, 1824, 2003
Hpy188III TCNNGA 8 cut(s) 1054, 1138, 1547, 1723, 1731, 1873, 2138, 2277
Hpy8I GTNNAC 8 cut(s) 352, 581, 1294, 1330, 1674, 1747, 1824, 2003
HpyAV CCTTC 3 cut(s) 143, 455, 664
HpyCH4III ACNGT 7 cut(s) 145, 185, 284, 598, 604, 1327, 1661
HpyCH4IV ACGT 1 cut(s) 1839
HpyF10VI GCNNNNNNNGC 9 cut(s) 56, 71, 77, 83, 298, 555, 1314, 1712, 2033
HpyF3I CTNAG 4 cut(s) 11, 20, 774, 922
HpySE526I ACGT 1 cut(s) 1839
Hsp92I GRCGYC 1 cut(s) 2068
HspAI GCGC 2 cut(s) 1585, 2232
KpnI GGTACC 1 cut(s) 1326
Kzo9I GATC 5 cut(s) 115, 754, 925, 1013, 1733
LguI GCTCTTC 1 cut(s) 773
LmnI GCTCC 4 cut(s) 387, 1201, 1261, 1613
LweI GCATC 5 cut(s) 86, 884, 1969, 2033, 2176
MaeI CTAG 5 cut(s) 210, 576, 1265, 1389, 1925
MaeII ACGT 1 cut(s) 1839
MalI GATC 5 cut(s) 117, 756, 927, 1015, 1735
MbiI CCGCTC 1 cut(s) 382
MboI GATC 5 cut(s) 115, 754, 925, 1013, 1733
MboII GAAGA 5 cut(s) 491, 677, 790, 1206, 2021
MflI RGATCY 1 cut(s) 925
MhlI GDGCHC 4 cut(s) 1618, 1872, 1907, 2005
MlsI TGGCCA 1 cut(s) 1308
MluNI TGGCCA 1 cut(s) 1308
MlyI GAGTC 1 cut(s) 545
MmeI TCCRAC 1 cut(s) 2079
Mox20I TGGCCA 1 cut(s) 1308
MroXI GAANNNNTTC 2 cut(s) 674, 964
MscI TGGCCA 1 cut(s) 1308
MslI CAYNNNNRTG 2 cut(s) 888, 1452
Msp20I TGGCCA 1 cut(s) 1308
MspA1I CMGCKG 1 cut(s) 773
MspI CCGG 5 cut(s) 30, 469, 823, 1218, 2006
MspR9I CCNGG 6 cut(s) 93, 161, 386, 861, 957, 1576
Mva1269I GAATGC 1 cut(s) 1630
MvaI CCWGG 6 cut(s) 93, 161, 386, 861, 957, 1576
MwoI GCNNNNNNNGC 9 cut(s) 56, 71, 77, 83, 298, 555, 1314, 1712, 2033
NcoI CCATGG 2 cut(s) 1309, 1947
NdeII GATC 5 cut(s) 115, 754, 925, 1013, 1733
NlaIV GGNNCC 4 cut(s) 500, 1324, 1354, 1797
NmuCI GTSAC 4 cut(s) 440, 598, 1661, 1835
NspI RCATGY 2 cut(s) 853, 2156
NspV TTCGAA 1 cut(s) 2120
PagI TCATGA 1 cut(s) 1546
PceI AGGCCT 2 cut(s) 520, 1923
PciI ACATGT 1 cut(s) 2152
PciSI GCTCTTC 1 cut(s) 773
PctI GAATGC 1 cut(s) 1630
PdmI GAANNNNTTC 2 cut(s) 674, 964
PfeI GAWTC 7 cut(s) 7, 491, 623, 874, 2107, 2204, 2273
PflMI CCANNNNNTGG 1 cut(s) 866
PleI GAGTC 1 cut(s) 544
PpsI GAGTC 1 cut(s) 544
PscI ACATGT 1 cut(s) 2152
PshBI ATTAAT 1 cut(s) 1059
PsiI TTATAA 1 cut(s) 327
Psp124BI GAGCTC 3 cut(s) 1618, 1872, 1907
Psp6I CCWGG 6 cut(s) 91, 159, 384, 859, 955, 1574
PspEI GGTNACC 1 cut(s) 464
PspGI CCWGG 6 cut(s) 91, 159, 384, 859, 955, 1574
PspN4I GGNNCC 4 cut(s) 500, 1324, 1354, 1797
PspPI GGNCC 3 cut(s) 825, 1795, 2174
PstI CTGCAG 3 cut(s) 647, 772, 935
PsuI RGATCY 1 cut(s) 925
PvuII CAGCTG 1 cut(s) 773
RsaI GTAC 9 cut(s) 187, 377, 488, 595, 989, 1324, 1773, 1805, 2253
RsaNI GTAC 9 cut(s) 186, 376, 487, 594, 988, 1323, 1772, 1804, 2252
RseI CAYNNNNRTG 2 cut(s) 888, 1452
SacI GAGCTC 3 cut(s) 1618, 1872, 1907
SapI GCTCTTC 1 cut(s) 773
Sau3AI GATC 5 cut(s) 115, 754, 925, 1013, 1733
Sau96I GGNCC 3 cut(s) 825, 1795, 2174
ScaI AGTACT 1 cut(s) 1805
SchI GAGTC 1 cut(s) 545
ScrFI CCNGG 6 cut(s) 93, 161, 386, 861, 957, 1576
SduI GDGCHC 4 cut(s) 1618, 1872, 1907, 2005
SfaNI GCATC 5 cut(s) 86, 884, 1969, 2033, 2176
SfcI CTRYAG 4 cut(s) 643, 768, 931, 1599
SfiI GGCCNNNNNGGCC 1 cut(s) 1314
SfuI TTCGAA 1 cut(s) 2120
SinI GGWCC 3 cut(s) 825, 1795, 2174
SmiMI CAYNNNNRTG 2 cut(s) 888, 1452
SmlI CTYRAG 3 cut(s) 81, 1588, 1983
SmoI CTYRAG 3 cut(s) 81, 1588, 1983
SpeI ACTAGT 1 cut(s) 209
SseBI AGGCCT 2 cut(s) 520, 1923
SsiI CCGC 4 cut(s) 69, 347, 380, 2144
SspI AATATT 3 cut(s) 297, 1063, 2262
SspMI CTAG 5 cut(s) 210, 576, 1265, 1389, 1925
SstI GAGCTC 3 cut(s) 1618, 1872, 1907
StuI AGGCCT 2 cut(s) 520, 1923
StyD4I CCNGG 6 cut(s) 91, 159, 384, 859, 955, 1574
StyI CCWWGG 4 cut(s) 1309, 1318, 1947, 2177
TaaI ACNGT 7 cut(s) 145, 185, 284, 598, 604, 1327, 1661
TaiI ACGT 1 cut(s) 1842
TaqI TCGA 2 cut(s) 2120, 2139
TaqII GACCGA 1 cut(s) 358
TatI WGTACW 4 cut(s) 185, 1771, 1803, 2251
TauI GCSGC 1 cut(s) 2147
TfiI GAWTC 7 cut(s) 7, 491, 623, 874, 2107, 2204, 2273
TscAI CASTG 5 cut(s) 609, 940, 945, 1282, 2028
TseFI GTSAC 4 cut(s) 440, 598, 1661, 1835
Tsp45I GTSAC 4 cut(s) 440, 598, 1661, 1835
TspGWI ACGGA 2 cut(s) 421, 2073
TspRI CASTG 5 cut(s) 609, 940, 945, 1282, 2028
Van91I CCANNNNNTGG 1 cut(s) 866
VneI GTGCAC 1 cut(s) 2001
VpaK11BI GGWCC 3 cut(s) 825, 1795, 2174
VspI ATTAAT 1 cut(s) 1059
XapI RAATTY 3 cut(s) 680, 1299, 1562
XceI RCATGY 2 cut(s) 853, 2156
XcmI CCANNNNNNNNNTGG 1 cut(s) 421
XmiI GTMKAC 4 cut(s) 351, 1293, 1329, 1673
XmnI GAANNNNTTC 2 cut(s) 674, 964
XspI CTAG 5 cut(s) 210, 576, 1265, 1389, 1925
ZrmI AGTACT 1 cut(s) 1805
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.