FvH4_3g10284

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000052
Physical Location & Seq
Reverse (-)
6004181 .. 6007797
3617 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10284.t2

Sequence Viewer

Length: 1377 bp
ATGCTAAGATCATGCGTCAATGGAGCGTGCGTTAATATGCCAGGAAATTACTCCTGTGTATGTCATAAGGGATACAGAAACTACACCACCCTTGACGGACGCTTCTGCATTGAAGATGATCCCGGCACTAAACAAGCTCCTCTCTTGCTTATTTATATGTTTGCCGCCGGCATTCCGGGAATCTTGTTTCTAGTAATCGGTACATGGTGGTTTTACAAAGCCATTAAGAAGAGGAAAAGCAATAAGCGGAAGAAGATGTTCTATAAGCAAAACGGTGGTTTGTTACTAGAGCAGCAATTATCTTCTGGTGAGGTTAATGTTGAAAAAATTAAGCTGTTCAGTTCAAACGAGCTAGAGAAAGCCACAGATCATTTCAATGCAAACAGGATTCTGGGAGAGGGAGGCCAAGGTACTGTTTACAAAGGAATGTTAACAGACGGAAGAATTGTTGCGGTAAAGAAGTCTAAGATAGTTGATGGAAGTGAAATTGCAGACTTCATCAATGAAATTGTGATCCTTTCACAAATTAACCACAGACATGTTGTCCAACTATTGGGGTGTTGTTTAGAGACTGAAATTCCTCTTTTGGTCTATGAATACCTACCAAACGGCACACTTTCTCACTACATTCATAACCAAGATCAAGAGTTTCCTCTTACATGGGAAACACGCTTACGAATTTCGATCGAAGTTGCAGGAGCTCTCTCCTACTTGCACTCATCAGCTTCTTGTCCTATTTACCATCGAGACATCAAGGCTGCAAACATACTATTAGATGACAAGGATAGAGCAAAAGTTGCAGATTTTGGAACCTCAAGATCTGTTTCCATTGACCACACACATCTTACCACCCTAGTACATGGAACATTTGGTTATTTGGATCCAGAGTACTTCCACTCTAGCCAATTTACAGACAAGAGTGATGTGTATAGTTTTGGTGTAGTCCTTGCTGAACTTTTAACTGGACAAAAACCAGTTTCTGTGACGCGGTCGCAGGAAAGCAGAAGCCTAGCAGCTTATTTCCTTCTTTCCATGGAGCAGAATCTTCTGTTTCATATTCTTGATGATCAAGTTATAAATGACGGTGGGAAAGAAGTGATTACAGCAGTCGCAAACCTTGCACGACGATGCTTAAATATGAAAGGAAAAAAACGTCCTACTATGAAAGAAGTAGCAGTGGAATTGGAGCGAATCCGATTGTCAACTAAAGGTTTCGATCATGTTCAAGAATATCTGACAGATAATGGAGACGTTCCAACCCAGGGAATAACCACCGAGGCTCATTGGGATGCTGTTTCTACATCAACCGATTTTTTTACAGAAGGTGGTACAGGTTCTTCATGGGATGTACAACCACTATTGTTTGACACCCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

459

Amino Acids

51.27

Weight (kDa)

6.32

Isoelectric Point (pI)

39.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 126 - 391 1.5e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 127 - 394 2.1e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1076
AccB7I CCANNNNNTGG 1 cut(s) 553
AccII CGCG 1 cut(s) 988
AciI CCGC 4 cut(s) 165, 247, 452, 988
AclWI GGATC 4 cut(s) 113, 508, 875, 888
AcsI RAATTY 2 cut(s) 576, 678
AfaI GTAC 6 cut(s) 202, 412, 858, 890, 1330, 1350
AfiI CCNNNNNNNGG 2 cut(s) 553, 1262
AflIII ACRYGT 1 cut(s) 538
AgsI TTSAA 5 cut(s) 113, 323, 345, 376, 1226
AhdI GACNNNNNGTC 1 cut(s) 542
AjnI CCWGG 2 cut(s) 40, 1260
AluBI AGCT 6 cut(s) 137, 334, 352, 701, 725, 1016
AluI AGCT 6 cut(s) 137, 334, 352, 701, 725, 1016
Alw21I GWGCWC 1 cut(s) 703
Alw26I GTCTC 3 cut(s) 563, 741, 1242
AlwI GGATC 4 cut(s) 113, 508, 875, 888
AlwNI CAGNNNCTG 1 cut(s) 980
AoxI GGCC 1 cut(s) 403
ApeKI GCWGC 3 cut(s) 292, 758, 1013
ApoI RAATTY 2 cut(s) 576, 678
Asp700I GAANNNNTTC 1 cut(s) 257
AsuC2I CCSGG 2 cut(s) 123, 177
AsuHPI GGTGA 1 cut(s) 320
BamHI GGATCC 1 cut(s) 880
BanII GRGCYC 1 cut(s) 703
BarI GAAGNNNNNNTAC 2 cut(s) 1321, 1353
Bbv12I GWGCWC 1 cut(s) 703
BbvI GCAGC 3 cut(s) 304, 745, 1025
BccI CCATC 2 cut(s) 470, 750
BceAI ACGGC 1 cut(s) 625
BciT130I CCWGG 2 cut(s) 42, 1262
BciVI GTATCC 1 cut(s) 65
BclI TGATCA 1 cut(s) 1066
BcnI CCSGG 2 cut(s) 123, 177
BcoDI GTCTC 3 cut(s) 563, 741, 1242
BfaI CTAG 6 cut(s) 191, 287, 353, 854, 900, 1010
BfmI CTRYAG 1 cut(s) 1373
BfuI GTATCC 1 cut(s) 65
BglII AGATCT 1 cut(s) 818
BisI GCNGC 4 cut(s) 165, 293, 759, 1014
BlsI GCNGC 4 cut(s) 166, 294, 760, 1015
BmcAI AGTACT 1 cut(s) 890
Bme1390I CCNGG 4 cut(s) 42, 123, 177, 1262
BmeRI GACNNNNNGTC 1 cut(s) 542
BmiI GGNNCC 2 cut(s) 811, 882
BmrFI CCNGG 4 cut(s) 42, 123, 177, 1262
BmsI GCATC 2 cut(s) 1118, 1279
BpuEI CTTGAG 1 cut(s) 799
BpuMI CCSGG 2 cut(s) 123, 177
BsaJI CCNNGG 5 cut(s) 406, 1032, 1260, 1261, 1275
BsaXI ACNNNNNCTCC 2 cut(s) 15, 45
Bsc4I CCNNNNNNNGG 2 cut(s) 553, 1262
Bse118I RCCGGY 1 cut(s) 167
Bse1I ACTGG 2 cut(s) 967, 974
BseBI CCWGG 2 cut(s) 42, 1262
BseDI CCNNGG 5 cut(s) 406, 1032, 1260, 1261, 1275
BseGI GGATG 2 cut(s) 1294, 1351
BseLI CCNNNNNNNGG 2 cut(s) 553, 1262
BseNI ACTGG 2 cut(s) 967, 974
BseRI GAGGAG 1 cut(s) 129
BseXI GCAGC 3 cut(s) 304, 745, 1025
Bsh1236I CGCG 1 cut(s) 988
Bsh1285I CGRYCG 2 cut(s) 687, 992
BshFI GGCC 1 cut(s) 405
BsiEI CGRYCG 2 cut(s) 687, 992
BsiHKAI GWGCWC 1 cut(s) 703
BsiSI CCGG 3 cut(s) 123, 168, 176
BslI CCNNNNNNNGG 2 cut(s) 553, 1262
BsmAI GTCTC 3 cut(s) 563, 741, 1242
BsmBI CGTCTC 1 cut(s) 1242
BsmI GAATGC 1 cut(s) 171
BsnI GGCC 1 cut(s) 405
Bsp1286I GDGCHC 1 cut(s) 703
Bsp1407I TGTACA 1 cut(s) 1348
Bsp19I CCATGG 1 cut(s) 1032
BspACI CCGC 4 cut(s) 165, 247, 452, 988
BspANI GGCC 1 cut(s) 405
BspFNI CGCG 1 cut(s) 988
BspLI GGNNCC 2 cut(s) 811, 882
BspPI GGATC 4 cut(s) 113, 508, 875, 888
BsrFI RCCGGY 1 cut(s) 167
BsrGI TGTACA 1 cut(s) 1348
BsrI ACTGG 2 cut(s) 967, 974
BssAI RCCGGY 1 cut(s) 167
BssECI CCNNGG 5 cut(s) 406, 1032, 1260, 1261, 1275
BssT1I CCWWGG 2 cut(s) 406, 1032
Bst2UI CCWGG 2 cut(s) 42, 1262
Bst4CI ACNGT 3 cut(s) 275, 415, 1085
Bst6I CTCTTC 1 cut(s) 224
BstAPI GCANNNNNTGC 2 cut(s) 797, 1118
BstAUI TGTACA 1 cut(s) 1348
BstC8I GCNNGC 2 cut(s) 28, 169
BstDEI CTNAG 2 cut(s) 5, 465
BstDSI CCRYGG 1 cut(s) 1032
BstF5I GGATG 2 cut(s) 1294, 1351
BstFNI CGCG 1 cut(s) 988
BstMAI GTCTC 3 cut(s) 563, 741, 1242
BstMCI CGRYCG 2 cut(s) 687, 992
BstMWI GCNNNNNNNGC 2 cut(s) 797, 1118
BstNI CCWGG 2 cut(s) 42, 1262
BstNSI RCATGY 1 cut(s) 542
BstSCI CCNGG 4 cut(s) 40, 121, 175, 1260
BstSFI CTRYAG 1 cut(s) 1373
BstUI CGCG 1 cut(s) 988
BstV1I GCAGC 3 cut(s) 304, 745, 1025
BstX2I RGATCY 2 cut(s) 818, 880
BstYI RGATCY 2 cut(s) 818, 880
BsuI GTATCC 1 cut(s) 65
BsuRI GGCC 1 cut(s) 405
BtgI CCRYGG 1 cut(s) 1032
BtsCI GGATG 2 cut(s) 1294, 1351
BtsI GCAGTG 1 cut(s) 1182
BtsIMutI CAGTG 1 cut(s) 1182
Cac8I GCNNGC 2 cut(s) 28, 169
CaiI CAGNNNCTG 1 cut(s) 980
Cfr10I RCCGGY 1 cut(s) 167
CseI GACGC 3 cut(s) 4, 108, 994
Csp6I GTAC 6 cut(s) 201, 411, 857, 889, 1329, 1349
CviAII CATG 8 cut(s) 12, 204, 539, 660, 860, 1033, 1220, 1341
CviQI GTAC 6 cut(s) 201, 411, 857, 889, 1329, 1349
DdeI CTNAG 2 cut(s) 5, 465
DriI GACNNNNNGTC 1 cut(s) 542
Eam1104I CTCTTC 1 cut(s) 224
Eam1105I GACNNNNNGTC 1 cut(s) 542
EarI CTCTTC 1 cut(s) 224
Ecl136II GAGCTC 1 cut(s) 701
Eco130I CCWWGG 2 cut(s) 406, 1032
Eco24I GRGCYC 1 cut(s) 703
Eco53kI GAGCTC 1 cut(s) 701
EcoICRI GAGCTC 1 cut(s) 701
EcoRII CCWGG 2 cut(s) 40, 1260
EcoT14I CCWWGG 2 cut(s) 406, 1032
EcoT38I GRGCYC 1 cut(s) 703
ErhI CCWWGG 2 cut(s) 406, 1032
Esp3I CGTCTC 1 cut(s) 1242
FaeI CATG 8 cut(s) 15, 207, 542, 663, 863, 1036, 1223, 1344
FatI CATG 8 cut(s) 11, 203, 538, 659, 859, 1032, 1219, 1340
FbaI TGATCA 1 cut(s) 1066
Fnu4HI GCNGC 4 cut(s) 165, 293, 759, 1014
FokI GGATG 2 cut(s) 1301, 1358
FriOI GRGCYC 1 cut(s) 703
Fsp4HI GCNGC 4 cut(s) 165, 293, 759, 1014
FspBI CTAG 6 cut(s) 191, 287, 353, 854, 900, 1010
GluI GCNGC 4 cut(s) 165, 293, 759, 1014
HaeIII GGCC 1 cut(s) 405
HapII CCGG 3 cut(s) 123, 168, 176
HgaI GACGC 3 cut(s) 4, 108, 994
Hin1II CATG 8 cut(s) 15, 207, 542, 663, 863, 1036, 1223, 1344
HincII GTYRAC 2 cut(s) 432, 1203
HindII GTYRAC 2 cut(s) 432, 1203
HinfI GANTC 4 cut(s) 180, 388, 1042, 1191
HpaI GTTAAC 1 cut(s) 432
HpaII CCGG 3 cut(s) 123, 168, 176
HphI GGTGA 1 cut(s) 320
Hpy166II GTNNAC 3 cut(s) 418, 432, 1203
Hpy188I TCNGA 2 cut(s) 1196, 1236
Hpy188III TCNNGA 6 cut(s) 644, 746, 816, 884, 1061, 1226
Hpy8I GTNNAC 3 cut(s) 418, 432, 1203
Hpy99I CGWCG 1 cut(s) 1128
HpyAV CCTTC 2 cut(s) 1034, 1316
HpyCH4III ACNGT 3 cut(s) 275, 415, 1085
HpyCH4IV ACGT 2 cut(s) 1153, 1251
HpyCH4V TGCA 8 cut(s) 108, 380, 491, 695, 715, 761, 800, 1121
HpyF10VI GCNNNNNNNGC 2 cut(s) 797, 1118
HpyF3I CTNAG 2 cut(s) 5, 465
HpySE526I ACGT 2 cut(s) 1153, 1251
Hsp92II CATG 8 cut(s) 15, 207, 542, 663, 863, 1036, 1223, 1344
KroI GCCGGC 1 cut(s) 167
KroNI GCCGGC 1 cut(s) 169
Ksp22I TGATCA 1 cut(s) 1066
KspAI GTTAAC 1 cut(s) 432
LmnI GCTCC 5 cut(s) 23, 142, 698, 1036, 1186
Lsp1109I GCAGC 3 cut(s) 304, 745, 1025
LweI GCATC 2 cut(s) 1118, 1279
MaeI CTAG 6 cut(s) 191, 287, 353, 854, 900, 1010
MaeII ACGT 2 cut(s) 1153, 1251
MaeIII GTNAC 2 cut(s) 282, 982
MboII GAAGA 8 cut(s) 125, 241, 262, 265, 294, 453, 1037, 1329
MflI RGATCY 2 cut(s) 818, 880
MhlI GDGCHC 1 cut(s) 703
MmeI TCCRAC 2 cut(s) 571, 1280
MnlI CCTC 9 cut(s) 150, 225, 304, 391, 395, 591, 663, 823, 1270
MroNI GCCGGC 1 cut(s) 167
MroXI GAANNNNTTC 1 cut(s) 257
MseI TTAA 8 cut(s) 33, 225, 315, 330, 431, 528, 959, 1133
MslI CAYNNNNRTG 4 cut(s) 375, 537, 1126, 1287
MspI CCGG 3 cut(s) 123, 168, 176
MspR9I CCNGG 4 cut(s) 42, 123, 177, 1262
Mva1269I GAATGC 1 cut(s) 171
MvaI CCWGG 2 cut(s) 42, 1262
MvnI CGCG 1 cut(s) 988
MwoI GCNNNNNNNGC 2 cut(s) 797, 1118
NaeI GCCGGC 1 cut(s) 169
NciI CCSGG 2 cut(s) 123, 177
NcoI CCATGG 1 cut(s) 1032
NgoMIV GCCGGC 1 cut(s) 167
NlaIII CATG 8 cut(s) 15, 207, 542, 663, 863, 1036, 1223, 1344
NlaIV GGNNCC 2 cut(s) 811, 882
NmuCI GTSAC 1 cut(s) 982
NspI RCATGY 1 cut(s) 542
PasI CCCWGGG 1 cut(s) 1261
PciI ACATGT 1 cut(s) 538
PctI GAATGC 1 cut(s) 171
PdiI GCCGGC 1 cut(s) 169
PdmI GAANNNNTTC 1 cut(s) 257
PfeI GAWTC 4 cut(s) 180, 388, 1042, 1191
PflFI GACNNNGTC 1 cut(s) 988
PflMI CCANNNNNTGG 1 cut(s) 553
PfoI TCCNGGA 1 cut(s) 175
PkrI GCNGC 4 cut(s) 166, 294, 760, 1015
Ple19I CGATCG 1 cut(s) 687
PscI ACATGT 1 cut(s) 538
PsiI TTATAA 1 cut(s) 1076
Psp124BI GAGCTC 1 cut(s) 703
Psp6I CCWGG 2 cut(s) 40, 1260
PspGI CCWGG 2 cut(s) 40, 1260
PspN4I GGNNCC 2 cut(s) 811, 882
PstNI CAGNNNCTG 1 cut(s) 980
PsuI RGATCY 2 cut(s) 818, 880
PsyI GACNNNGTC 1 cut(s) 988
PvuI CGATCG 1 cut(s) 687
RsaI GTAC 6 cut(s) 202, 412, 858, 890, 1330, 1350
RsaNI GTAC 6 cut(s) 201, 411, 857, 889, 1329, 1349
RseI CAYNNNNRTG 4 cut(s) 375, 537, 1126, 1287
SacI GAGCTC 1 cut(s) 703
SaqAI TTAA 8 cut(s) 33, 225, 315, 330, 431, 528, 959, 1133
SatI GCNGC 4 cut(s) 165, 293, 759, 1014
ScaI AGTACT 1 cut(s) 890
ScrFI CCNGG 4 cut(s) 42, 123, 177, 1262
SduI GDGCHC 1 cut(s) 703
SfaNI GCATC 2 cut(s) 1118, 1279
SfcI CTRYAG 1 cut(s) 1373
SmiMI CAYNNNNRTG 4 cut(s) 375, 537, 1126, 1287
SmlI CTYRAG 1 cut(s) 814
SmoI CTYRAG 1 cut(s) 814
SsiI CCGC 4 cut(s) 165, 247, 452, 988
SspMI CTAG 6 cut(s) 191, 287, 353, 854, 900, 1010
SstI GAGCTC 1 cut(s) 703
StyD4I CCNGG 4 cut(s) 40, 121, 175, 1260
StyI CCWWGG 2 cut(s) 406, 1032
TaaI ACNGT 3 cut(s) 275, 415, 1085
TaiI ACGT 2 cut(s) 1156, 1254
TaqI TCGA 4 cut(s) 683, 687, 745, 1215
TatI WGTACW 3 cut(s) 856, 888, 1348
TauI GCSGC 1 cut(s) 167
TfiI GAWTC 4 cut(s) 180, 388, 1042, 1191
Tru1I TTAA 8 cut(s) 33, 225, 315, 330, 431, 528, 959, 1133
Tru9I TTAA 8 cut(s) 33, 225, 315, 330, 431, 528, 959, 1133
TscAI CASTG 1 cut(s) 1182
TseFI GTSAC 1 cut(s) 982
TseI GCWGC 3 cut(s) 292, 758, 1013
Tsp45I GTSAC 1 cut(s) 982
TspDTI ATGAA 8 cut(s) 487, 519, 609, 620, 1043, 1154, 1178, 1329
TspGWI ACGGA 2 cut(s) 111, 453
TspRI CASTG 1 cut(s) 1182
Tth111I GACNNNGTC 1 cut(s) 988
Van91I CCANNNNNTGG 1 cut(s) 553
XapI RAATTY 2 cut(s) 576, 678
XceI RCATGY 1 cut(s) 542
XmnI GAANNNNTTC 1 cut(s) 257
XspI CTAG 6 cut(s) 191, 287, 353, 854, 900, 1010
ZrmI AGTACT 1 cut(s) 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.