Rw2G040860

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
66526434 .. 66532133
5700 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G040860.1

Sequence Viewer

Length: 2253 bp
ATGATGATGCAAATGCTAGTTCATCAAATGGTCTTCATTTTGCTGTTATCCATATGCCGCTCAAGCACTGCTGCACCACAGATGGCAAAGCGTGGTTGCACAGATAAGTGTGGAAATGTTACCATCCCGTACCCTTTCGGGATTGGACCTGATGAAAATTGTTACTATGACGAATGGTTTCAAATCGACTGCCAAAAATCTGGTCAATCTACCGTGGAGAAGCCTTTCTTGAGGCTTACCAAATTGGAGGTAAAGAATATATCTACCGAAGGAAGGCTTCAGGTGTACAACCCTGTCACATTCTTCTGCGAGGAAAACAATAGTAGCCAAGCTGCAAATTTAAGCGGCAGCCCTTTCATCTACTCCCAGAGCTACAACATATTCACTGCAGTGAGTTGCAATTCCTTTGCCTCGTTGAGTTCCGCAGACTTTGTTGTTGGCGGATGCAGGTCAGTGTGTGATCAAGAAGATCCTGACTACCTGGGTTGCGATTTCGGTTTTAACTGTTGTCAGACTAGTATTCCTCCATACCTCACTGTTAATAATGCTACCTTACCTAAGAATACTACAAATTGCAAAATGTTTGCCTTCCTGGTAGACAAATATTGGTTTGAGTACATAACCAATTCATCACCAACAATTTCTGACTTTACAGCTGACATGAAGAGATTGCGCATGGTTCCTGTGACACTAAACTGGCGCATAAACAACAACACTGGGCCATTTGATTTATTTAACGGGTCCATTGTTGATTTAGATCAGTATTTTGATAACGTGTATGGTTTCTCAAGGGATTCGGATCCCAATCCGTGTTGCTATATTAGCACTTCTCCTGCATTCAATTGGTCGATAATTTATTGCTCCTGCCGCCGGGGCTTCAAGGGAAATCCGTATCTCGGGCTATATTGTGAAGACAATAATGAATGCCAGGATGGTCCCCGCCGATGCTTTGGCAACGACAAGTGCGTGAACGAGTATGGTTCGTACCGATGTGAGGACGACAGGAGAAAGGCTAAATTGATCCTTGCCGCAGGTTTGAGCTCGAGCCTTGGACTCTTATTATTGCTTATTGGTTTGTGGTTTGGATACAAATTCCTGAAGAAAAAGAATGAGATCAAACGAAAAAAGATGTTCTTCAAGCGAAATGGTGGTTTATTATTAGAACAACAATTATCGTCAGGCGAAGTTAATGTTGAGAAAATCAAATTGTTCAAATCACAGGAGTTAGAAAAGTCTACCGATAATTTTAATGTGGATAGAATTCTTGGCCAAGGAGGTCAAGGTACTGTATACAAAGGCATGTTGGAGGACGGGAGAATTGTTGCTGTGAAGAAGTCTAAAATAGTTGATGAAAGCCAACTTTCAGAATTCATCAATGAGGTTGTCATTCTTTCCCAAATTAACCATAGAAATGTGGTTCAACTATTGGGTTGTTGTTTAGAGACAGAAGTTCCTCTTTTGGTTTATGAATTTATACCAAATGGAACCCTTTCCAAGTATATCATAGAGCAAGTTGAAGACTTCACACTCACATGGAAAATGCGCTTACGAATTGCCACAGAAATTGCAGGGGGTCTCTCGTACTTACACTATGCAGCTTCCTTTCCAATTTATCATAGAGATATCAAGTCTACAAACATACTCTTAGATGATAAATATAGAGCAAAAATTGCTGACTTTGGAACTTCGAGATCAATTGCTATTGACCAAACTCACCTGACCACATCACTTGTACATGGCACATTTGGTTACTTGGACCCTGAATATTTTCAGTCAAGCCAATTTACAGAGAAAAGTGATGTGTATAGCTTTGGGGTTGTTCTTGTTGAGCTCTTAACAGGACAAAAACCAATTTCTTTCCTAAGGTCAGAGAATGAAGGCAGAAGTCTTGCCACATATTTCATTATTTCCATGCACAAAGATCGTCTATTTGAAATTGTTGAAGCTCAAGTTTTGAAGGAAGGATCAAAAGCAGATATTGTAAGAGTGGCAAATCTTGCAAGAAGATGTCTGAATTTGAATGGAAGGAAGCGCCCTACAATGAGAGAGGTCACATCAGAGCTAGAAGGGATTCAAATGACAGAAAAGACTTCTAATGGCGAACAAAACTATGAAGAGGTTGAATTTGTCAGAACTGAATTAATTGAGCCATGGGATATTGGTTCAAGTTCAACGGGAACAGGATCAGCTTTGGATGTTGGTCGGGTTTCATCATTTCATGAAATTCCCCTATTATCTTTCAAGTCAAGGTGA

Protein Analysis

750

Amino Acids

84.84

Weight (kDa)

5.95

Isoelectric Point (pI)

38.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 94 1.3e-12 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 416 - 685 7.6e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 418 - 688 7.9e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 674
Acc36I ACCTGC 2 cut(s) 438, 1022
AccBSI CCGCTC 1 cut(s) 60
AccI GTMKAC 4 cut(s) 597, 1235, 1290, 1631
AciI CCGC 7 cut(s) 58, 345, 423, 441, 868, 940, 1029
AclWI GGATC 6 cut(s) 464, 794, 807, 1015, 1972, 2191
AcoI YGGCCR 1 cut(s) 1267
AcsI RAATTY 8 cut(s) 337, 1091, 1260, 1367, 1469, 2014, 2123, 2223
AcuI CTGAAG 2 cut(s) 263, 1118
AfaI GTAC 7 cut(s) 131, 287, 617, 986, 1285, 1583, 1734
AfiI CCNNNNNNNGG 4 cut(s) 273, 870, 896, 994
AflIII ACRYGT 1 cut(s) 774
AhlI ACTAGT 1 cut(s) 515
AjnI CCWGG 3 cut(s) 480, 591, 927
AleI CACNNNNGTG 1 cut(s) 389
Alw21I GWGCWC 2 cut(s) 1043, 1833
Alw26I GTCTC 2 cut(s) 1436, 1580
AlwI GGATC 6 cut(s) 464, 794, 807, 1015, 1972, 2191
Ama87I CYCGRG 2 cut(s) 896, 1042
AoxI GGCC 2 cut(s) 719, 1267
ApeKI GCWGC 4 cut(s) 71, 332, 348, 1595
ApoI RAATTY 8 cut(s) 337, 1091, 1260, 1367, 1469, 2014, 2123, 2223
ArsI GACNNNNNNTTYG 2 cut(s) 187, 219
AseI ATTAAT 1 cut(s) 2141
Asp700I GAANNNNTTC 5 cut(s) 177, 224, 1489, 1767, 2070
AspLEI GCGC 4 cut(s) 675, 702, 1545, 2034
AspS9I GGNCC 5 cut(s) 146, 719, 741, 935, 1756
AsuC2I CCSGG 1 cut(s) 872
AsuHPI GGTGA 2 cut(s) 624, 1706
AvaI CYCGRG 2 cut(s) 896, 1042
AvaII GGWCC 4 cut(s) 146, 741, 935, 1756
AxyI CCTNAGG 1 cut(s) 1862
BalI TGGCCA 1 cut(s) 1269
BamHI GGATCC 1 cut(s) 799
BanII GRGCYC 2 cut(s) 1043, 1833
BbsI GAAGAC 3 cut(s) 25, 918, 1524
Bbv12I GWGCWC 2 cut(s) 1043, 1833
BbvI GCAGC 4 cut(s) 58, 319, 360, 1607
BccI CCATC 3 cut(s) 76, 131, 926
BcgI CGANNNNNNTGC 2 cut(s) 1904, 1938
BciT130I CCWGG 3 cut(s) 482, 593, 929
BciVI GTATCC 1 cut(s) 1079
BclI TGATCA 1 cut(s) 460
BcnI CCSGG 1 cut(s) 872
BcoDI GTCTC 2 cut(s) 1436, 1580
BcuI ACTAGT 1 cut(s) 515
BfaI CTAG 3 cut(s) 17, 516, 2063
BfmI CTRYAG 1 cut(s) 387
BfoI RGCGCY 1 cut(s) 2035
BfuAI ACCTGC 2 cut(s) 438, 1022
BfuI GTATCC 1 cut(s) 1079
BglI GCCNNNNNGGC 1 cut(s) 873
BisI GCNGC 8 cut(s) 58, 72, 333, 346, 349, 868, 1029, 1596
BlsI GCNGC 8 cut(s) 59, 73, 334, 347, 350, 869, 1030, 1597
Bme1390I CCNGG 4 cut(s) 482, 593, 872, 929
Bme18I GGWCC 4 cut(s) 146, 741, 935, 1756
BmeT110I CYCGRG 2 cut(s) 896, 1042
BmgT120I GGNCC 5 cut(s) 146, 719, 741, 935, 1756
BmiI GGNNCC 6 cut(s) 681, 742, 801, 937, 1486, 1758
BmrFI CCNGG 4 cut(s) 482, 593, 872, 929
BmrI ACTGGG 1 cut(s) 726
BmsI GCATC 2 cut(s) 434, 935
BmuI ACTGGG 1 cut(s) 726
BpiI GAAGAC 3 cut(s) 25, 918, 1524
BpuEI CTTGAG 4 cut(s) 46, 250, 772, 1932
BpuMI CCSGG 1 cut(s) 872
BsaBI GATNNNNATC 3 cut(s) 756, 798, 804
BsaI GGTCTC 1 cut(s) 1580
BsaJI CCNNGG 6 cut(s) 213, 481, 871, 1048, 1270, 2150
Bsc4I CCNNNNNNNGG 4 cut(s) 273, 870, 896, 994
Bse1I ACTGG 2 cut(s) 701, 721
Bse21I CCTNAGG 1 cut(s) 1862
Bse8I GATNNNNATC 3 cut(s) 756, 798, 804
BseBI CCWGG 3 cut(s) 482, 593, 929
BseDI CCNNGG 6 cut(s) 213, 481, 871, 1048, 1270, 2150
BseGI GGATG 4 cut(s) 123, 449, 937, 2200
BseJI GATNNNNATC 3 cut(s) 756, 798, 804
BseLI CCNNNNNNNGG 4 cut(s) 273, 870, 896, 994
BseNI ACTGG 2 cut(s) 701, 721
BseXI GCAGC 4 cut(s) 58, 319, 360, 1607
BsgI GTGCAG 1 cut(s) 57
BshFI GGCC 2 cut(s) 721, 1269
BsiHKAI GWGCWC 2 cut(s) 1043, 1833
BsiHKCI CYCGRG 2 cut(s) 896, 1042
BsiSI CCGG 1 cut(s) 871
BslFI GGGAC 1 cut(s) 921
BslI CCNNNNNNNGG 4 cut(s) 273, 870, 896, 994
BsmAI GTCTC 2 cut(s) 1436, 1580
BsmFI GGGAC 1 cut(s) 921
BsmI GAATGC 2 cut(s) 836, 929
BsnI GGCC 2 cut(s) 721, 1269
Bso31I GGTCTC 1 cut(s) 1580
BsoBI CYCGRG 2 cut(s) 896, 1042
Bsp1286I GDGCHC 2 cut(s) 1043, 1833
Bsp1407I TGTACA 2 cut(s) 285, 1732
Bsp19I CCATGG 1 cut(s) 2150
BspACI CCGC 7 cut(s) 58, 345, 423, 441, 868, 940, 1029
BspANI GGCC 2 cut(s) 721, 1269
BspHI TCATGA 1 cut(s) 2218
BspLI GGNNCC 6 cut(s) 681, 742, 801, 937, 1486, 1758
BspMAI CTGCAG 1 cut(s) 391
BspMI ACCTGC 2 cut(s) 438, 1022
BspPI GGATC 6 cut(s) 464, 794, 807, 1015, 1972, 2191
BspTNI GGTCTC 1 cut(s) 1580
BsrBI CCGCTC 1 cut(s) 60
BsrGI TGTACA 2 cut(s) 285, 1732
BsrI ACTGG 2 cut(s) 701, 721
BssECI CCNNGG 6 cut(s) 213, 481, 871, 1048, 1270, 2150
BssNAI GTATAC 1 cut(s) 1291
BssT1I CCWWGG 3 cut(s) 1048, 1270, 2150
Bst1107I GTATAC 1 cut(s) 1291
Bst2UI CCWGG 3 cut(s) 482, 593, 929
Bst4CI ACNGT 4 cut(s) 214, 506, 538, 1288
Bst6I CTCTTC 2 cut(s) 659, 2109
BstAPI GCANNNNNTGC 2 cut(s) 1670, 1997
BstAUI TGTACA 2 cut(s) 285, 1732
BstDEI CTNAG 3 cut(s) 558, 1645, 1862
BstDSI CCRYGG 2 cut(s) 213, 2150
BstF5I GGATG 4 cut(s) 123, 449, 937, 2200
BstH2I RGCGCY 1 cut(s) 2035
BstHHI GCGC 4 cut(s) 675, 702, 1545, 2034
BstMAI GTCTC 2 cut(s) 1436, 1580
BstMWI GCNNNNNNNGC 6 cut(s) 63, 822, 867, 873, 1670, 1997
BstNI CCWGG 3 cut(s) 482, 593, 929
BstNSI RCATGY 1 cut(s) 1303
BstSCI CCNGG 4 cut(s) 480, 591, 870, 927
BstSFI CTRYAG 1 cut(s) 387
BstV1I GCAGC 4 cut(s) 58, 319, 360, 1607
BstV2I GAAGAC 3 cut(s) 25, 918, 1524
BstX2I RGATCY 2 cut(s) 469, 799
BstXI CCANNNNNNTGG 1 cut(s) 200
BstYI RGATCY 2 cut(s) 469, 799
BstZ17I GTATAC 1 cut(s) 1291
Bsu36I CCTNAGG 1 cut(s) 1862
BsuI GTATCC 1 cut(s) 1079
BsuRI GGCC 2 cut(s) 721, 1269
BtgI CCRYGG 2 cut(s) 213, 2150
BtsCI GGATG 4 cut(s) 123, 449, 937, 2200
BtsI GCAGTG 3 cut(s) 66, 384, 396
BtsIMutI CAGTG 6 cut(s) 66, 384, 396, 459, 534, 714
BveI ACCTGC 2 cut(s) 438, 1022
CciI TCATGA 1 cut(s) 2218
CfoI GCGC 4 cut(s) 675, 702, 1545, 2034
Cfr13I GGNCC 5 cut(s) 146, 719, 741, 935, 1756
Csp6I GTAC 7 cut(s) 130, 286, 616, 985, 1284, 1582, 1733
CspCI CAANNNNNGTGG 4 cut(s) 1546, 1581, 1711, 1746
CviAII CATG 8 cut(s) 661, 676, 1300, 1533, 1736, 1912, 2151, 2219
CviQI GTAC 7 cut(s) 130, 286, 616, 985, 1284, 1582, 1733
DdeI CTNAG 3 cut(s) 558, 1645, 1862
EaeI YGGCCR 1 cut(s) 1267
Eam1104I CTCTTC 2 cut(s) 659, 2109
EarI CTCTTC 2 cut(s) 659, 2109
EciI GGCGGA 1 cut(s) 456
Ecl136II GAGCTC 2 cut(s) 1041, 1831
Eco130I CCWWGG 3 cut(s) 1048, 1270, 2150
Eco24I GRGCYC 2 cut(s) 1043, 1833
Eco31I GGTCTC 1 cut(s) 1580
Eco32I GATATC 1 cut(s) 1624
Eco47I GGWCC 4 cut(s) 146, 741, 935, 1756
Eco53kI GAGCTC 2 cut(s) 1041, 1831
Eco57I CTGAAG 2 cut(s) 263, 1118
Eco81I CCTNAGG 1 cut(s) 1862
Eco88I CYCGRG 2 cut(s) 896, 1042
EcoICRI GAGCTC 2 cut(s) 1041, 1831
EcoRI GAATTC 2 cut(s) 1260, 1367
EcoRII CCWGG 3 cut(s) 480, 591, 927
EcoRV GATATC 1 cut(s) 1624
EcoT14I CCWWGG 3 cut(s) 1048, 1270, 2150
EcoT38I GRGCYC 2 cut(s) 1043, 1833
ErhI CCWWGG 3 cut(s) 1048, 1270, 2150
FaeI CATG 8 cut(s) 664, 679, 1303, 1536, 1739, 1915, 2154, 2222
FalI AAGNNNNNCTT 8 cut(s) 212, 244, 261, 293, 1118, 1150, 1440, 1472
FaqI GGGAC 1 cut(s) 921
FatI CATG 8 cut(s) 660, 675, 1299, 1532, 1735, 1911, 2150, 2218
FauI CCCGC 1 cut(s) 947
FauNDI CATATG 1 cut(s) 53
FbaI TGATCA 1 cut(s) 460
FblI GTMKAC 4 cut(s) 597, 1235, 1290, 1631
Fnu4HI GCNGC 8 cut(s) 58, 72, 333, 346, 349, 868, 1029, 1596
FokI GGATG 4 cut(s) 110, 456, 944, 2207
FriOI GRGCYC 2 cut(s) 1043, 1833
Fsp4HI GCNGC 8 cut(s) 58, 72, 333, 346, 349, 868, 1029, 1596
FspBI CTAG 3 cut(s) 17, 516, 2063
FspI TGCGCA 1 cut(s) 674
GlaI GCGC 4 cut(s) 674, 701, 1544, 2033
GluI GCNGC 8 cut(s) 58, 72, 333, 346, 349, 868, 1029, 1596
HaeII RGCGCY 1 cut(s) 2035
HaeIII GGCC 2 cut(s) 721, 1269
HapII CCGG 1 cut(s) 871
HhaI GCGC 4 cut(s) 675, 702, 1545, 2034
Hin1II CATG 8 cut(s) 664, 679, 1303, 1536, 1739, 1915, 2154, 2222
Hin6I GCGC 4 cut(s) 673, 700, 1543, 2032
HinP1I GCGC 4 cut(s) 673, 700, 1543, 2032
HinfI GANTC 3 cut(s) 794, 1053, 2071
HpaII CCGG 1 cut(s) 871
HphI GGTGA 2 cut(s) 624, 1706
Hpy166II GTNNAC 6 cut(s) 286, 598, 970, 1236, 1291, 1632
Hpy188I TCNGA 8 cut(s) 513, 646, 799, 1366, 1870, 2013, 2059, 2132
Hpy188III TCNNGA 7 cut(s) 139, 229, 464, 473, 1096, 1689, 2219
Hpy8I GTNNAC 6 cut(s) 286, 598, 970, 1236, 1291, 1632
HpyAV CCTTC 8 cut(s) 263, 267, 598, 1871, 1951, 1955, 2019, 2060
HpyCH4III ACNGT 4 cut(s) 214, 506, 538, 1288
HpyCH4IV ACGT 1 cut(s) 774
HpyF10VI GCNNNNNNNGC 6 cut(s) 63, 822, 867, 873, 1670, 1997
HpyF3I CTNAG 3 cut(s) 558, 1645, 1862
HpySE526I ACGT 1 cut(s) 774
Hsp92II CATG 8 cut(s) 664, 679, 1303, 1536, 1739, 1915, 2154, 2222
HspAI GCGC 4 cut(s) 673, 700, 1543, 2032
Ksp22I TGATCA 1 cut(s) 460
LmnI GCTCC 1 cut(s) 866
Lsp1109I GCAGC 4 cut(s) 58, 319, 360, 1607
LweI GCATC 2 cut(s) 434, 935
MaeI CTAG 3 cut(s) 17, 516, 2063
MaeII ACGT 1 cut(s) 774
MaeIII GTNAC 6 cut(s) 118, 161, 295, 685, 1748, 2050
MbiI CCGCTC 1 cut(s) 60
MfeI CAATTG 2 cut(s) 841, 1695
MflI RGATCY 2 cut(s) 469, 799
MhlI GDGCHC 2 cut(s) 1043, 1833
MlsI TGGCCA 1 cut(s) 1269
MluNI TGGCCA 1 cut(s) 1269
MlyI GAGTC 1 cut(s) 1047
MmeI TCCRAC 1 cut(s) 1284
Mox20I TGGCCA 1 cut(s) 1269
MroXI GAANNNNTTC 5 cut(s) 177, 224, 1489, 1767, 2070
MscI TGGCCA 1 cut(s) 1269
MseI TTAA 9 cut(s) 341, 501, 540, 735, 1188, 1248, 1401, 1835, 2141
MslI CAYNNNNRTG 3 cut(s) 389, 1410, 1531
Msp20I TGGCCA 1 cut(s) 1269
MspA1I CMGCKG 1 cut(s) 656
MspI CCGG 1 cut(s) 871
MspR9I CCNGG 4 cut(s) 482, 593, 872, 929
MunI CAATTG 2 cut(s) 841, 1695
Mva1269I GAATGC 2 cut(s) 836, 929
MvaI CCWGG 3 cut(s) 482, 593, 929
MwoI GCNNNNNNNGC 6 cut(s) 63, 822, 867, 873, 1670, 1997
NciI CCSGG 1 cut(s) 872
NcoI CCATGG 1 cut(s) 2150
NdeI CATATG 1 cut(s) 53
NlaIII CATG 8 cut(s) 664, 679, 1303, 1536, 1739, 1915, 2154, 2222
NlaIV GGNNCC 6 cut(s) 681, 742, 801, 937, 1486, 1758
NmuCI GTSAC 3 cut(s) 295, 685, 2050
NsbI TGCGCA 1 cut(s) 674
NspI RCATGY 1 cut(s) 1303
OliI CACNNNNGTG 1 cut(s) 389
PaeR7I CTCGAG 1 cut(s) 1042
PagI TCATGA 1 cut(s) 2218
PcsI WCGNNNNNNNCGW 1 cut(s) 963
PctI GAATGC 2 cut(s) 836, 929
PdmI GAANNNNTTC 5 cut(s) 177, 224, 1489, 1767, 2070
PfeI GAWTC 2 cut(s) 794, 2071
PkrI GCNGC 8 cut(s) 59, 73, 334, 347, 350, 869, 1030, 1597
PleI GAGTC 1 cut(s) 1047
PpsI GAGTC 1 cut(s) 1047
PshBI ATTAAT 1 cut(s) 2141
Psp124BI GAGCTC 2 cut(s) 1043, 1833
Psp6I CCWGG 3 cut(s) 480, 591, 927
PspGI CCWGG 3 cut(s) 480, 591, 927
PspN4I GGNNCC 6 cut(s) 681, 742, 801, 937, 1486, 1758
PspPI GGNCC 5 cut(s) 146, 719, 741, 935, 1756
PspXI VCTCGAGB 1 cut(s) 1042
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 2 cut(s) 469, 799
PvuII CAGCTG 1 cut(s) 656
RsaI GTAC 7 cut(s) 131, 287, 617, 986, 1285, 1583, 1734
RsaNI GTAC 7 cut(s) 130, 286, 616, 985, 1284, 1582, 1733
RseI CAYNNNNRTG 3 cut(s) 389, 1410, 1531
SacI GAGCTC 2 cut(s) 1043, 1833
SaqAI TTAA 9 cut(s) 341, 501, 540, 735, 1188, 1248, 1401, 1835, 2141
SatI GCNGC 8 cut(s) 58, 72, 333, 346, 349, 868, 1029, 1596
Sau96I GGNCC 5 cut(s) 146, 719, 741, 935, 1756
SchI GAGTC 1 cut(s) 1047
ScrFI CCNGG 4 cut(s) 482, 593, 872, 929
SduI GDGCHC 2 cut(s) 1043, 1833
SfaNI GCATC 2 cut(s) 434, 935
SfcI CTRYAG 1 cut(s) 387
Sfr274I CTCGAG 1 cut(s) 1042
SinI GGWCC 4 cut(s) 146, 741, 935, 1756
SlaI CTCGAG 1 cut(s) 1042
SmiMI CAYNNNNRTG 3 cut(s) 389, 1410, 1531
SmlI CTYRAG 5 cut(s) 61, 229, 787, 1042, 1947
SmoI CTYRAG 5 cut(s) 61, 229, 787, 1042, 1947
SpeI ACTAGT 1 cut(s) 515
SsiI CCGC 7 cut(s) 58, 345, 423, 441, 868, 940, 1029
SspI AATATT 2 cut(s) 605, 1766
SspMI CTAG 3 cut(s) 17, 516, 2063
SstI GAGCTC 2 cut(s) 1043, 1833
StyD4I CCNGG 4 cut(s) 480, 591, 870, 927
StyI CCWWGG 3 cut(s) 1048, 1270, 2150
TaaI ACNGT 4 cut(s) 214, 506, 538, 1288
TaiI ACGT 1 cut(s) 777
TaqI TCGA 4 cut(s) 186, 848, 1043, 1688
TatI WGTACW 3 cut(s) 285, 615, 1732
TauI GCSGC 4 cut(s) 60, 348, 870, 1031
TfiI GAWTC 2 cut(s) 794, 2071
Tru1I TTAA 9 cut(s) 341, 501, 540, 735, 1188, 1248, 1401, 1835, 2141
Tru9I TTAA 9 cut(s) 341, 501, 540, 735, 1188, 1248, 1401, 1835, 2141
TscAI CASTG 6 cut(s) 73, 391, 396, 459, 541, 721
TseFI GTSAC 3 cut(s) 295, 685, 2050
TseI GCWGC 4 cut(s) 71, 332, 348, 1595
Tsp45I GTSAC 3 cut(s) 295, 685, 2050
TspGWI ACGGA 2 cut(s) 798, 879
TspRI CASTG 6 cut(s) 73, 391, 396, 459, 541, 721
VpaK11BI GGWCC 4 cut(s) 146, 741, 935, 1756
VspI ATTAAT 1 cut(s) 2141
XapI RAATTY 8 cut(s) 337, 1091, 1260, 1367, 1469, 2014, 2123, 2223
XceI RCATGY 1 cut(s) 1303
XhoI CTCGAG 1 cut(s) 1042
XmiI GTMKAC 4 cut(s) 597, 1235, 1290, 1631
XmnI GAANNNNTTC 5 cut(s) 177, 224, 1489, 1767, 2070
XspI CTAG 3 cut(s) 17, 516, 2063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.