FvH4_6g37670

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
29679927 .. 29682823
2897 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g37670.t1

Sequence Viewer

Length: 2238 bp
ATGGAGATCCAGTTGCTGCCACTTCCTATTTCTCTTTTAACATTGTGCTCTTTGAGCTGTAGTGCAATATTTAGCGTAGCATCATCCCCCTCGTTAGCAAAGCCTAATTGTCCATCCCATTGTGGAAGCATAGAAATCCCTTTTCCTTTTGGAATTGGACCGGGTTGTTACCAAGACAACAGCACATTTGACCGCGGGTTCCAGATATTGTGTGACAGTTCGACCAATCCACCAAAACCTTTCTTGAAACTTCCCAACAATACTCGACCGGAGGTGCTCGAGATATCTCTTAAGGGCACTCTAAGAATTAACAGTCCTATCTTCTTTTCCGATTGCCCTAACAAGCTAAACAACCGCCAGTCACCAAACCTACCCAACCTGCTTTTATATACTCCTTTTCGGGTGTCAGAGGAGAACAAGTTCACTTCGGTGAGTTGCGGGAGGATTGCATCGCTGACGTTCCCGGAGCGTGAAGGGCAAATAATGGCTGTCTGTTTGTCCATTTGTGATGAGTACAGTCCCGTATTGGTAAATAATACCTGCAATGGTATCAACTGTTGTCAGACATCCATTCCTTTTTCCACTTTTGGAGTCCTCAATACTAGTTTTGGACCTTTGATAAATGGTAGCGGCTCTGAAACATCAGCTTGCAAGTATGCGTTCCTGGTAGACCCAGAATGGTTTACTTCACATTCAACAAATACTTCTGCCATTGCTGAGATGGATTACGTTCCCATAGTGCTAGAATGGTGGTTGATGTTCGGAGGAATAGATAATTCTACTTCTACTCAAGATAACATGAACAGGAATTGCAAATCTTGGAGAGGTCCATGTTTCTGCTCAAAGGGCTATCAAGGAAACCCCTATCTTCTTGGTGGATGTCAAGATATCAATGAATGCGAGGATCCAAAACTCCCTAATATATGTGGTTCTGCCGTTTGTTCGAATATTGATGGAACCTTTGAATGCTACACCTACAACCCACAACCTCAGTCGTTGCAGCCGATTAAGCTTGCCATTATAGTTCTCTGCAGTGTTTTGGGACTGGTTTTTGTAATCATTGGCGTGTGGTGCTTGCACAAAGTCTTAAAGAAAAGGAAAAACATTAAGCGCAAGCAAAAGTTCTATACACAGAATGGTGGTTTGTTGTTGGAGAAACTATTATCTTCTGGTGAGATCAATGTTGAGATGATTAAGTTGTTCGATGCAAAAGAATTAGAGAAAGCCACAGATCAGTTTAATGCAGACAGAATTCTCGGTGAAGGAGGCCAAGGTACAGTTTATAAAGGAATGTTGACAGATGGAAGAATTGTTGCTGTCAAGAAGTCAAAAATAGCAGACAAAGGAGAAGTGTGTCAATTCATTAATGAAATTTTCATTCTTTCACAAATTAACCACAGGAATGTGGTTAAACTCTTGGGATGTTGTTTAGAGAGTGAAGTTCCCTTATTAGTTTATGAATTCCTACCTAATGGAACCCTTTCTCAATACATTCGCAGTCGTGATGAGGACTTCCCTCTTACATGGGAAATACGATTACGAGTTGGTACCGAAGTTGCTGGAGCCCTTTCCTACTTGCATTCATCTGCTTCTATGCCCATTTACCATCGAGACATTAAGTCTTCAAACATACTCTTGGATGAGAAGCATAGAGCAAAAGTTGCAGATTTTGGAACCTCAAGATCGGTTTCCATTGACCAAACGCATCTTACCATGACACACGTAAATGGAACTTTTGGTTATCTGGACCCTGAGTACTTCCAGTCTAGCCAATTCACAGATAAAAGTGATGTTTATAGCTTTGGAGTAGTCCTTGCCGAGCTCTTGACTGGACAAAAACCAGTTTCTGTAACAAGGTCAGAGGAGGGGAGACAAGAAGGGAGAAGCCTAGCAACTTATTTCATTGTTTCCATGGAGGAGAATTTCTTGTTTGATATTCTTGATGCTGAAGTTATGAAAGGAGGTAAGAAAGAAGAGATAATGGCGGTTGCTAATCTTGCAAAACGTTGCTTGAATATGAAAGGAAAGAAGCGTCCTACTATGAAAGAAATAGCAGTTGAGTTGGAGGGAATTCTAATGTCAAGTAAATCTTCTGATGTTGAACGCATTACAGAGATTCAATATCTCCAGACGAAAATTGTCAAGGCTTGGGGTGTTGTTTCCACATCAACAGGGTCTCATTTGAACAGTGGTTCACCATTAGATGTGCAACCACTATTGTCTTTCAATTCGCACTGA

Protein Analysis

746

Amino Acids

82.49

Weight (kDa)

6.2

Isoelectric Point (pI)

42.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 37 - 104 6e-11 Wall-associated receptor kinase galacturonan-binding
WAK PF08488 178 - 252 5.3e-09 Wall-associated kinase
Pkinase PF00069 414 - 684 1.8e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 415 - 687 1.8e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1284
Acc36I ACCTGC 2 cut(s) 387, 548
Acc65I GGTACC 1 cut(s) 1547
AccB1I GGYRCC 1 cut(s) 1547
AccI GTMKAC 1 cut(s) 669
AccII CGCG 1 cut(s) 195
AciI CCGC 6 cut(s) 193, 195, 355, 438, 630, 1985
AclI AACGTT 1 cut(s) 2005
AclWI GGATC 2 cut(s) 899, 912
AcsI RAATTY 5 cut(s) 1251, 1371, 1460, 1921, 2070
AcuI CTGAAG 1 cut(s) 1968
AfaI GTAC 4 cut(s) 515, 1276, 1549, 1757
AflII CTTAAG 1 cut(s) 290
AflIII ACRYGT 1 cut(s) 1720
AgsI TTSAA 9 cut(s) 247, 696, 965, 1626, 2014, 2102, 2120, 2185, 2227
AhdI GACNNNNNGTC 1 cut(s) 1618
AhlI ACTAGT 1 cut(s) 602
AjnI CCWGG 1 cut(s) 663
AleI CACNNNNGTG 1 cut(s) 428
AloI GAACNNNNNNTCC 2 cut(s) 404, 436
AluBI AGCT 6 cut(s) 57, 346, 647, 1012, 1800, 1822
AluI AGCT 6 cut(s) 57, 346, 647, 1012, 1800, 1822
Alw21I GWGCWC 3 cut(s) 50, 279, 1824
Alw26I GTCTC 3 cut(s) 1605, 1864, 2181
AlwI GGATC 2 cut(s) 899, 912
AlwNI CAGNNNCTG 2 cut(s) 16, 1847
Ama87I CYCGRG 1 cut(s) 278
AoxI GGCC 1 cut(s) 1267
ApeKI GCWGC 2 cut(s) 16, 1000
ApoI RAATTY 5 cut(s) 1251, 1371, 1460, 1921, 2070
AseI ATTAAT 1 cut(s) 1365
Asp700I GAANNNNTTC 2 cut(s) 419, 1480
Asp718I GGTACC 1 cut(s) 1547
AspLEI GCGC 1 cut(s) 1113
AspS9I GGNCC 4 cut(s) 158, 611, 827, 1747
AsuC2I CCSGG 2 cut(s) 162, 464
AsuHPI GGTGA 5 cut(s) 354, 442, 1184, 1271, 2187
AsuII TTCGAA 1 cut(s) 944
AvaI CYCGRG 1 cut(s) 278
AvaII GGWCC 4 cut(s) 158, 611, 827, 1747
BaeGI GKGCMC 1 cut(s) 299
BaeI ACNNNNGTAYC 2 cut(s) 1539, 1572
BamHI GGATCC 1 cut(s) 904
BanI GGYRCC 1 cut(s) 1547
BanII GRGCYC 2 cut(s) 1567, 1824
BbsI GAAGAC 1 cut(s) 1614
Bbv12I GWGCWC 3 cut(s) 50, 279, 1824
BbvI GCAGC 2 cut(s) 3, 1012
BccI CCATC 5 cut(s) 121, 715, 947, 1295, 1614
BceAI ACGGC 1 cut(s) 920
BciT130I CCWGG 1 cut(s) 665
BcnI CCSGG 2 cut(s) 162, 464
BcoDI GTCTC 3 cut(s) 1605, 1864, 2181
BcuI ACTAGT 1 cut(s) 602
BfaI CTAG 4 cut(s) 603, 743, 1767, 1889
BfmI CTRYAG 2 cut(s) 58, 1030
BfrI CTTAAG 1 cut(s) 290
BfuAI ACCTGC 2 cut(s) 387, 548
BisI GCNGC 3 cut(s) 17, 631, 1001
BlsI GCNGC 3 cut(s) 18, 632, 1002
BmcAI AGTACT 1 cut(s) 1757
Bme1390I CCNGG 3 cut(s) 162, 464, 665
Bme18I GGWCC 4 cut(s) 158, 611, 827, 1747
BmeRI GACNNNNNGTC 1 cut(s) 1618
BmeT110I CYCGRG 1 cut(s) 278
BmgT120I GGNCC 4 cut(s) 158, 611, 827, 1747
BmiI GGNNCC 8 cut(s) 200, 906, 958, 1477, 1549, 1564, 1675, 1749
BmrFI CCNGG 3 cut(s) 162, 464, 665
BmsI GCATC 5 cut(s) 89, 458, 1195, 1714, 1933
BpiI GAAGAC 1 cut(s) 1614
BpmI CTGGAG 2 cut(s) 1581, 2111
Bpu14I TTCGAA 1 cut(s) 944
BpuEI CTTGAG 2 cut(s) 774, 1663
BpuMI CCSGG 2 cut(s) 162, 464
BsaAI YACGTR 1 cut(s) 1723
BsaI GGTCTC 1 cut(s) 2181
BsaJI CCNNGG 3 cut(s) 193, 1270, 1911
BsaWI WCCGGW 1 cut(s) 268
BsaXI ACNNNNNCTCC 3 cut(s) 26, 404, 434
Bse1I ACTGG 6 cut(s) 10, 358, 1050, 1762, 1834, 1841
Bse3DI GCAATG 2 cut(s) 550, 711
BseBI CCWGG 1 cut(s) 665
BseDI CCNNGG 3 cut(s) 193, 1270, 1911
BseGI GGATG 6 cut(s) 83, 113, 566, 884, 1427, 1645
BseMI GCAATG 2 cut(s) 550, 711
BseMII CTCAG 3 cut(s) 708, 1004, 1743
BseNI ACTGG 6 cut(s) 10, 358, 1050, 1762, 1834, 1841
BseRI GAGGAG 3 cut(s) 425, 1877, 1931
BseSI GKGCMC 1 cut(s) 299
BseXI GCAGC 2 cut(s) 3, 1012
Bsh1236I CGCG 1 cut(s) 195
Bsh1285I CGRYCG 1 cut(s) 269
BshFI GGCC 1 cut(s) 1269
BshNI GGYRCC 1 cut(s) 1547
BsiEI CGRYCG 1 cut(s) 269
BsiHKAI GWGCWC 3 cut(s) 50, 279, 1824
BsiHKCI CYCGRG 1 cut(s) 278
BsiSI CCGG 3 cut(s) 161, 269, 464
BslFI GGGAC 2 cut(s) 504, 1056
BsmAI GTCTC 3 cut(s) 1605, 1864, 2181
BsmFI GGGAC 2 cut(s) 504, 1056
BsmI GAATGC 3 cut(s) 902, 971, 1579
BsnI GGCC 1 cut(s) 1269
Bso31I GGTCTC 1 cut(s) 2181
BsoBI CYCGRG 1 cut(s) 278
Bsp119I TTCGAA 1 cut(s) 944
Bsp1286I GDGCHC 5 cut(s) 50, 279, 299, 1567, 1824
Bsp143I GATC 5 cut(s) 6, 904, 1176, 1231, 1682
Bsp19I CCATGG 1 cut(s) 1911
BspACI CCGC 6 cut(s) 193, 195, 355, 438, 630, 1985
BspANI GGCC 1 cut(s) 1269
BspCNI CTCAG 3 cut(s) 709, 1003, 1744
BspFNI CGCG 1 cut(s) 195
BspLI GGNNCC 8 cut(s) 200, 906, 958, 1477, 1549, 1564, 1675, 1749
BspMAI CTGCAG 1 cut(s) 1034
BspMI ACCTGC 2 cut(s) 387, 548
BspPI GGATC 2 cut(s) 899, 912
BspT104I TTCGAA 1 cut(s) 944
BspT107I GGYRCC 1 cut(s) 1547
BspTI CTTAAG 1 cut(s) 290
BspTNI GGTCTC 1 cut(s) 2181
BsrDI GCAATG 2 cut(s) 550, 711
BsrI ACTGG 6 cut(s) 10, 358, 1050, 1762, 1834, 1841
BssECI CCNNGG 3 cut(s) 193, 1270, 1911
BssMI GATC 5 cut(s) 6, 904, 1176, 1231, 1682
BssT1I CCWWGG 2 cut(s) 1270, 1911
Bst2UI CCWGG 1 cut(s) 665
Bst4CI ACNGT 6 cut(s) 218, 314, 518, 557, 1279, 2189
Bst6I CTCTTC 1 cut(s) 1968
BstAFI CTTAAG 1 cut(s) 290
BstAPI GCANNNNNTGC 1 cut(s) 1661
BstBAI YACGTR 1 cut(s) 1723
BstBI TTCGAA 1 cut(s) 944
BstC8I GCNNGC 4 cut(s) 649, 1014, 1076, 1115
BstDEI CTNAG 4 cut(s) 302, 717, 990, 1752
BstDSI CCRYGG 2 cut(s) 193, 1911
BstF5I GGATG 6 cut(s) 83, 113, 566, 884, 1427, 1645
BstFNI CGCG 1 cut(s) 195
BstHHI GCGC 1 cut(s) 1113
BstKTI GATC 5 cut(s) 9, 907, 1179, 1234, 1685
BstMAI GTCTC 3 cut(s) 1605, 1864, 2181
BstMBI GATC 5 cut(s) 6, 904, 1176, 1231, 1682
BstMCI CGRYCG 1 cut(s) 269
BstMWI GCNNNNNNNGC 7 cut(s) 54, 475, 846, 1009, 1071, 1661, 1997
BstNI CCWGG 1 cut(s) 665
BstSCI CCNGG 3 cut(s) 160, 462, 663
BstSFI CTRYAG 2 cut(s) 58, 1030
BstSLI GKGCMC 1 cut(s) 299
BstUI CGCG 1 cut(s) 195
BstV1I GCAGC 2 cut(s) 3, 1012
BstV2I GAAGAC 1 cut(s) 1614
BstX2I RGATCY 2 cut(s) 6, 904
BstYI RGATCY 2 cut(s) 6, 904
BsuRI GGCC 1 cut(s) 1269
BtgI CCRYGG 2 cut(s) 193, 1911
BtgZI GCGATG 1 cut(s) 435
BtsCI GGATG 6 cut(s) 83, 113, 566, 884, 1427, 1645
BtsI GCAGTG 1 cut(s) 1039
BtsIMutI CAGTG 3 cut(s) 1039, 2194, 2233
BveI ACCTGC 2 cut(s) 387, 548
Cac8I GCNNGC 4 cut(s) 649, 1014, 1076, 1115
CaiI CAGNNNCTG 2 cut(s) 16, 1847
CfoI GCGC 1 cut(s) 1113
Cfr13I GGNCC 4 cut(s) 158, 611, 827, 1747
Cfr42I CCGCGG 1 cut(s) 196
CseI GACGC 1 cut(s) 2021
Csp6I GTAC 4 cut(s) 514, 1275, 1548, 1756
CviAII CATG 5 cut(s) 799, 831, 1524, 1714, 1912
CviQI GTAC 4 cut(s) 514, 1275, 1548, 1756
DdeI CTNAG 4 cut(s) 302, 717, 990, 1752
DpnI GATC 5 cut(s) 8, 906, 1178, 1233, 1684
DpnII GATC 5 cut(s) 6, 904, 1176, 1231, 1682
DriI GACNNNNNGTC 1 cut(s) 1618
Eam1104I CTCTTC 1 cut(s) 1968
Eam1105I GACNNNNNGTC 1 cut(s) 1618
EarI CTCTTC 1 cut(s) 1968
Ecl136II GAGCTC 1 cut(s) 1822
Eco130I CCWWGG 2 cut(s) 1270, 1911
Eco24I GRGCYC 2 cut(s) 1567, 1824
Eco31I GGTCTC 1 cut(s) 2181
Eco32I GATATC 2 cut(s) 285, 889
Eco47I GGWCC 4 cut(s) 158, 611, 827, 1747
Eco53kI GAGCTC 1 cut(s) 1822
Eco57I CTGAAG 1 cut(s) 1968
Eco88I CYCGRG 1 cut(s) 278
EcoICRI GAGCTC 1 cut(s) 1822
EcoRI GAATTC 3 cut(s) 1251, 1460, 2070
EcoRII CCWGG 1 cut(s) 663
EcoRV GATATC 2 cut(s) 285, 889
EcoT14I CCWWGG 2 cut(s) 1270, 1911
EcoT38I GRGCYC 2 cut(s) 1567, 1824
ErhI CCWWGG 2 cut(s) 1270, 1911
FaeI CATG 5 cut(s) 802, 834, 1527, 1717, 1915
FalI AAGNNNNNCTT 2 cut(s) 2074, 2106
FaqI GGGAC 2 cut(s) 504, 1056
FatI CATG 5 cut(s) 798, 830, 1523, 1713, 1911
FauI CCCGC 2 cut(s) 188, 431
FblI GTMKAC 1 cut(s) 669
Fnu4HI GCNGC 3 cut(s) 17, 631, 1001
FokI GGATG 6 cut(s) 70, 100, 553, 891, 1434, 1652
FriOI GRGCYC 2 cut(s) 1567, 1824
Fsp4HI GCNGC 3 cut(s) 17, 631, 1001
FspBI CTAG 4 cut(s) 603, 743, 1767, 1889
GlaI GCGC 1 cut(s) 1112
GluI GCNGC 3 cut(s) 17, 631, 1001
GsuI CTGGAG 2 cut(s) 1581, 2111
HaeIII GGCC 1 cut(s) 1269
HapII CCGG 3 cut(s) 161, 269, 464
HgaI GACGC 1 cut(s) 2021
HhaI GCGC 1 cut(s) 1113
Hin1II CATG 5 cut(s) 802, 834, 1527, 1717, 1915
Hin6I GCGC 1 cut(s) 1111
HinP1I GCGC 1 cut(s) 1111
HincII GTYRAC 1 cut(s) 1296
HindII GTYRAC 1 cut(s) 1296
HindIII AAGCTT 1 cut(s) 1010
HinfI GANTC 2 cut(s) 591, 2116
HpaII CCGG 3 cut(s) 161, 269, 464
HphI GGTGA 5 cut(s) 354, 442, 1184, 1271, 2187
Hpy166II GTNNAC 5 cut(s) 423, 670, 684, 1296, 2195
Hpy188I TCNGA 7 cut(s) 331, 409, 564, 637, 764, 1861, 2095
Hpy8I GTNNAC 5 cut(s) 423, 670, 684, 1296, 2195
HpyAV CCTTC 3 cut(s) 467, 1256, 1871
HpyCH4III ACNGT 6 cut(s) 218, 314, 518, 557, 1279, 2189
HpyCH4IV ACGT 4 cut(s) 458, 729, 1722, 2005
HpyF10VI GCNNNNNNNGC 7 cut(s) 54, 475, 846, 1009, 1071, 1661, 1997
HpyF3I CTNAG 4 cut(s) 302, 717, 990, 1752
HpySE526I ACGT 4 cut(s) 458, 729, 1722, 2005
Hsp92II CATG 5 cut(s) 802, 834, 1527, 1717, 1915
HspAI GCGC 1 cut(s) 1111
KpnI GGTACC 1 cut(s) 1551
KspI CCGCGG 1 cut(s) 196
Kzo9I GATC 5 cut(s) 6, 904, 1176, 1231, 1682
LmnI GCTCC 2 cut(s) 466, 1562
Lsp1109I GCAGC 2 cut(s) 3, 1012
LweI GCATC 5 cut(s) 89, 458, 1195, 1714, 1933
MaeI CTAG 4 cut(s) 603, 743, 1767, 1889
MaeII ACGT 4 cut(s) 458, 729, 1722, 2005
MaeIII GTNAC 4 cut(s) 167, 212, 360, 1849
MalI GATC 5 cut(s) 8, 906, 1178, 1233, 1684
MboI GATC 5 cut(s) 6, 904, 1176, 1231, 1682
MboII GAAGA 7 cut(s) 313, 860, 1158, 1317, 1614, 1985, 2082
MflI RGATCY 2 cut(s) 6, 904
MhlI GDGCHC 5 cut(s) 50, 279, 299, 1567, 1824
MlyI GAGTC 1 cut(s) 600
MmeI TCCRAC 2 cut(s) 1131, 2043
MroXI GAANNNNTTC 2 cut(s) 419, 1480
MslI CAYNNNNRTG 4 cut(s) 428, 1064, 1401, 1725
MspA1I CMGCKG 1 cut(s) 195
MspCI CTTAAG 1 cut(s) 290
MspI CCGG 3 cut(s) 161, 269, 464
MspR9I CCNGG 3 cut(s) 162, 464, 665
Mva1269I GAATGC 3 cut(s) 902, 971, 1579
MvaI CCWGG 1 cut(s) 665
MvnI CGCG 1 cut(s) 195
MwoI GCNNNNNNNGC 7 cut(s) 54, 475, 846, 1009, 1071, 1661, 1997
NciI CCSGG 2 cut(s) 162, 464
NcoI CCATGG 1 cut(s) 1911
NdeII GATC 5 cut(s) 6, 904, 1176, 1231, 1682
NlaIII CATG 5 cut(s) 802, 834, 1527, 1717, 1915
NlaIV GGNNCC 8 cut(s) 200, 906, 958, 1477, 1549, 1564, 1675, 1749
NmeAIII GCCGAG 1 cut(s) 1843
NmuCI GTSAC 2 cut(s) 212, 360
NspV TTCGAA 1 cut(s) 944
OliI CACNNNNGTG 1 cut(s) 428
PaeR7I CTCGAG 1 cut(s) 278
PcsI WCGNNNNNNNCGW 1 cut(s) 1001
PctI GAATGC 3 cut(s) 902, 971, 1579
PdmI GAANNNNTTC 2 cut(s) 419, 1480
PfeI GAWTC 1 cut(s) 2116
PfoI TCCNGGA 1 cut(s) 462
PkrI GCNGC 3 cut(s) 18, 632, 1002
PleI GAGTC 1 cut(s) 599
PpsI GAGTC 1 cut(s) 599
Ppu21I YACGTR 1 cut(s) 1723
PshBI ATTAAT 1 cut(s) 1365
PsiI TTATAA 1 cut(s) 1284
Psp124BI GAGCTC 1 cut(s) 1824
Psp1406I AACGTT 1 cut(s) 2005
Psp6I CCWGG 1 cut(s) 663
PspGI CCWGG 1 cut(s) 663
PspN4I GGNNCC 8 cut(s) 200, 906, 958, 1477, 1549, 1564, 1675, 1749
PspPI GGNCC 4 cut(s) 158, 611, 827, 1747
PstI CTGCAG 1 cut(s) 1034
PstNI CAGNNNCTG 2 cut(s) 16, 1847
PsuI RGATCY 2 cut(s) 6, 904
RsaI GTAC 4 cut(s) 515, 1276, 1549, 1757
RsaNI GTAC 4 cut(s) 514, 1275, 1548, 1756
RseI CAYNNNNRTG 4 cut(s) 428, 1064, 1401, 1725
SacI GAGCTC 1 cut(s) 1824
SacII CCGCGG 1 cut(s) 196
SatI GCNGC 3 cut(s) 17, 631, 1001
Sau3AI GATC 5 cut(s) 6, 904, 1176, 1231, 1682
Sau96I GGNCC 4 cut(s) 158, 611, 827, 1747
ScaI AGTACT 1 cut(s) 1757
SchI GAGTC 1 cut(s) 600
ScrFI CCNGG 3 cut(s) 162, 464, 665
SduI GDGCHC 5 cut(s) 50, 279, 299, 1567, 1824
SfaNI GCATC 5 cut(s) 89, 458, 1195, 1714, 1933
SfcI CTRYAG 2 cut(s) 58, 1030
Sfr274I CTCGAG 1 cut(s) 278
Sfr303I CCGCGG 1 cut(s) 196
SfuI TTCGAA 1 cut(s) 944
SgrBI CCGCGG 1 cut(s) 196
SinI GGWCC 4 cut(s) 158, 611, 827, 1747
SlaI CTCGAG 1 cut(s) 278
SmiMI CAYNNNNRTG 4 cut(s) 428, 1064, 1401, 1725
SmlI CTYRAG 4 cut(s) 278, 290, 789, 1678
SmoI CTYRAG 4 cut(s) 278, 290, 789, 1678
SpeI ACTAGT 1 cut(s) 602
SsiI CCGC 6 cut(s) 193, 195, 355, 438, 630, 1985
SspI AATATT 2 cut(s) 69, 949
SspMI CTAG 4 cut(s) 603, 743, 1767, 1889
SstI GAGCTC 1 cut(s) 1824
StyD4I CCNGG 3 cut(s) 160, 462, 663
StyI CCWWGG 2 cut(s) 1270, 1911
TaaI ACNGT 6 cut(s) 218, 314, 518, 557, 1279, 2189
TaiI ACGT 4 cut(s) 461, 732, 1725, 2008
TaqI TCGA 6 cut(s) 221, 265, 279, 944, 1203, 1609
TatI WGTACW 2 cut(s) 513, 1755
TauI GCSGC 1 cut(s) 633
TfiI GAWTC 1 cut(s) 2116
TscAI CASTG 2 cut(s) 1039, 2194
TseFI GTSAC 2 cut(s) 212, 360
TseI GCWGC 2 cut(s) 16, 1000
Tsp45I GTSAC 2 cut(s) 212, 360
TspRI CASTG 2 cut(s) 1039, 2194
Vha464I CTTAAG 1 cut(s) 290
VpaK11BI GGWCC 4 cut(s) 158, 611, 827, 1747
VspI ATTAAT 1 cut(s) 1365
XapI RAATTY 5 cut(s) 1251, 1371, 1460, 1921, 2070
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XhoI CTCGAG 1 cut(s) 278
XmiI GTMKAC 1 cut(s) 669
XmnI GAANNNNTTC 2 cut(s) 419, 1480
XspI CTAG 4 cut(s) 603, 743, 1767, 1889
ZrmI AGTACT 1 cut(s) 1757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.