Rh2BG340500

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
45394487 .. 45418319
23833 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG340500.1

Sequence Viewer

Length: 2229 bp
ATGTCTAGATCCCAGTTCCAGTTTCTTGTGCTGCACTTTACTAGTCTGTTCATCTTGTGGGCTATGAGCAGCAGGACAACACTAGCTGCAGCCTCACCGGTGCCCCCCACAGACTCGATAGCAAAGCTTCACTGCCCGTCCCATTGTGGACACATTGCAATCCCATACCCTTTTGGAATTGGAGAAGGCTGCTACCTTACCGGCAGCGACACAGGTTTCTACAGCAACTCGTTCCAGATAATATGTAACTACTCAACCAGCCCTCCCAAACCTTTCTTGACCAGCACGAGTCTTGAAGTGCTGGAAATCTCTATTGAAGGCACACTACAGGTCAGAAGCCCCATAACCTTCTCAAATTGCACTGACAAGCCGGGACTGCCGAGCAACCGCCAGACCTACAACCTGGAGCAAACCCCTTTCTGGTACTCCCAGGACAACAGATTCACTTCAATGAGTTGTGGAGGAATTGCCCTAATGACAAAATTTTCTAATGGGTTGACAACAACACTTGGTGGCTGCTTGTCCATTTGTGACTACTCCAGTAACCCTGTATTAAAGAAGAATACCTGCATTGGTATCAACTGCTGCCAATCCACCTTTCCTAAATATCTAAAGAACTTCAATGCTAGCTTTGCAGACGTAATAAACGCTCGCAGTGCTAAGGAATGCAAGTATGCATTCGTTGTAAAGCAAAGTTGGTTTACTAGAACAAATATGTCGGTCATTGGTGATATGGACTACGTCCCTGTGGAGCTGAAATGGAGCGCACGCCCATATTCGGATATCTCGAACAACTGGACTGTCTCTAACAATAGCACATATATCAGCGATGATGGACGTCTACTCTTATGCTCAAAAGGCTATGAAGGAAACCCTTATCTTCTTCATGGATGTCAAGATATCAATGAATGTGAGGGTCGACCATGTGTTAGTTACGGGATCTGTATCAATTATCCTGGAGGCTTTAAGTGTGATCCTCCACCGACAAGCTTAAGGCCGGAAAAGCTGGTTGTTATAGTTACAAGCAGTGTTTTTGGAGTTCTACTCATACTCATTTGTGGATGGTGGTCGCACAAAGTCATAAAAAAACGGAAGAACATCAAACGCAAGAAGAAGTTCTTCAAACAAAATGGTGGCTTCTTGTTGGAGCAACAATTTTCTTCAGGTGAAGTCAATGTTGAGAAAATCAAGCTGTTTAATTCCAAGGAGTTAGAGAAAGCCACAGACCATTTTAATGTGGACAGGATTCTTGGTCAAGGAGGCCAAGGTACTGTTTACAAAGGAATGCTGGCAGATGGAAGAATTGTTGCTGTGAAGAAGTCTAAACTAGTTCATGGTGGAGAAGTTAGACAATTCATCAATGAAATTGTCATTCTTTCCCAAATTATCCACAGAAATGTGGTCAAACTTTTGGGTTGTTGCTTAGAGACAGAAGTTCCTCTTTTGGTTTATGAATTCATTGCCAACGGAACATTGTCTGACTATATTCATCAGCAGAATGAAGAGTTTCCTCTTACATGGGAAATAAGACTACGAGTTGCCATCGAAGTAGCAAGAGCTCTTTCCTATTTACATTCTGCAGCTGCTTTTCCCATTTATCATCGAGATATCAAGTCATCTAACATACTCCTGGATGATAAATACAGAGCAAAAGTAGCAGACTTTGGGACTTCTCGATCTATTTCCATTGACCAAACACACCTTACCACACTAGTATATGGAACATTTGGTTATTTGGACCCAGAGTACTTCCAATCTAGCCAATTTACAGACAAGAGTGATGTTTATAGCTTTGGTGTGGTACTTGCTGAGCTCTTAACTGGACAAAAACCAGTTTCTTTCACAAGATCCCAAGAAGAAAGAAGCCTAGCGACTTATTTCCTTCTTTCTATGGATCAAGATTGTCTGTTTGATGTTCTAGATCCTCAAGTTACGAGATATGGTGGGAAAGAAGAGATTACTGCAGTTGCTAACCTTGCAAAAAGATGCTTAAATTTGAATGGAAGGAGACGACCTACTATGAAAGAAGTAGCAGTTGAGTTGGAGGCAATTCAATCGTCAATTAAGGCCTCTAATCATGTTGATCAAAATTTGGAAGAGGTTGCTTATATCCAAACTCATGAGATAACCGAGGCTTGGGATATTGTTTCTACATCAACAGGGCCTTGTATCGATGGTGGTAGGTCTTCATTCGATGCACAACCACTGTTGACTTTGAAGACTCTGTGA

Protein Analysis

742

Amino Acids

82.87

Weight (kDa)

7.9

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 45 - 110 9.7e-09 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 411 - 677 7.7e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 413 - 680 2.4e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 841
Acc36I ACCTGC 1 cut(s) 575
AccB1I GGYRCC 1 cut(s) 100
AccI GTMKAC 2 cut(s) 841, 919
AciI CCGC 1 cut(s) 388
AclWI GGATC 6 cut(s) 3, 947, 968, 1842, 1902, 1916
AcsI RAATTY 4 cut(s) 482, 1454, 1993, 2089
AcuI CTGAAG 1 cut(s) 1146
AcyI GRCGYC 1 cut(s) 838
AdeI CACNNNGTG 1 cut(s) 512
AfaI GTAC 4 cut(s) 425, 1270, 1748, 1803
AfiI CCNNNNNNNGG 3 cut(s) 420, 778, 2136
AflII CTTAAG 1 cut(s) 991
AgeI ACCGGT 1 cut(s) 97
AgsI TTSAA 8 cut(s) 296, 317, 450, 622, 1123, 1999, 2054, 2218
AhlI ACTAGT 3 cut(s) 41, 1327, 1711
AjnI CCWGG 4 cut(s) 402, 429, 955, 1629
AjuI GAANNNNNNNTTGG 2 cut(s) 582, 614
Alw21I GWGCWC 2 cut(s) 1561, 1815
Alw26I GTCTC 3 cut(s) 808, 1421, 2002
AlwI GGATC 6 cut(s) 3, 947, 968, 1842, 1902, 1916
AoxI GGCC 4 cut(s) 995, 1261, 2067, 2162
ApoI RAATTY 4 cut(s) 482, 1454, 1993, 2089
AsiGI ACCGGT 1 cut(s) 97
Asp700I GAANNNNTTC 3 cut(s) 1115, 1118, 1506
AspLEI GCGC 1 cut(s) 767
AspS9I GGNCC 2 cut(s) 1738, 2162
AsuC2I CCSGG 1 cut(s) 372
AsuHPI GGTGA 3 cut(s) 87, 740, 1178
AsuNHI GCTAGC 1 cut(s) 626
AvaII GGWCC 1 cut(s) 1738
BaeGI GKGCMC 1 cut(s) 105
BanI GGYRCC 1 cut(s) 100
BanII GRGCYC 2 cut(s) 1561, 1815
BarI GAAGNNNNNNTAC 2 cut(s) 309, 341
BauI CACGAG 1 cut(s) 286
BbsI GAAGAC 2 cut(s) 2178, 2225
Bbv12I GWGCWC 2 cut(s) 1561, 1815
BccI CCATC 5 cut(s) 827, 1056, 1289, 1550, 2168
BcgI CGANNNNNNTGC 2 cut(s) 2037, 2071
BciT130I CCWGG 4 cut(s) 404, 431, 957, 1631
BclI TGATCA 1 cut(s) 2083
BcnI CCSGG 1 cut(s) 372
BcoDI GTCTC 3 cut(s) 808, 1421, 2002
BcuI ACTAGT 3 cut(s) 41, 1327, 1711
BfmI CTRYAG 5 cut(s) 87, 220, 326, 1578, 1962
BfrI CTTAAG 1 cut(s) 991
BfuAI ACCTGC 1 cut(s) 575
BlpI GCTNAGC 1 cut(s) 1809
BmcAI AGTACT 1 cut(s) 1748
Bme1390I CCNGG 5 cut(s) 372, 404, 431, 957, 1631
Bme18I GGWCC 1 cut(s) 1738
BmgT120I GGNCC 2 cut(s) 1738, 2162
BmiI GGNNCC 2 cut(s) 102, 1740
BmrFI CCNGG 5 cut(s) 372, 404, 431, 957, 1631
BmrI ACTGGG 1 cut(s) 7
BmsI GCATC 2 cut(s) 1976, 2185
BmtI GCTAGC 1 cut(s) 630
BmuI ACTGGG 1 cut(s) 7
BpiI GAAGAC 2 cut(s) 2178, 2225
BplI GAGNNNNNCTC 2 cut(s) 1029, 1061
BpmI CTGGAG 3 cut(s) 425, 523, 978
Bpu10I CCTNAGC 1 cut(s) 660
Bpu1102I GCTNAGC 1 cut(s) 1809
BpuEI CTTGAG 1 cut(s) 1911
BpuMI CCSGG 1 cut(s) 372
Bsa29I ATCGAT 1 cut(s) 2172
BsaBI GATNNNNATC 1 cut(s) 944
BsaHI GRCGYC 1 cut(s) 838
BsaJI CCNNGG 4 cut(s) 429, 1203, 1264, 2130
BsaWI WCCGGW 1 cut(s) 97
BsaXI ACNNNNNCTCC 2 cut(s) 247, 277
Bsc4I CCNNNNNNNGG 3 cut(s) 420, 778, 2136
Bse118I RCCGGY 2 cut(s) 97, 200
Bse1I ACTGG 6 cut(s) 13, 19, 540, 800, 1825, 1832
Bse3DI GCAATG 2 cut(s) 153, 1458
Bse8I GATNNNNATC 1 cut(s) 944
BseBI CCWGG 4 cut(s) 404, 431, 957, 1631
BseCI ATCGAT 1 cut(s) 2172
BseDI CCNNGG 4 cut(s) 429, 1203, 1264, 2130
BseGI GGATG 3 cut(s) 896, 1067, 1639
BseJI GATNNNNATC 1 cut(s) 944
BseLI CCNNNNNNNGG 3 cut(s) 420, 778, 2136
BseMI GCAATG 2 cut(s) 153, 1458
BseMII CTCAG 1 cut(s) 1800
BseNI ACTGG 6 cut(s) 13, 19, 540, 800, 1825, 1832
BseSI GKGCMC 1 cut(s) 105
BsgI GTGCAG 1 cut(s) 17
BshFI GGCC 4 cut(s) 997, 1263, 2069, 2164
BshNI GGYRCC 1 cut(s) 100
BshTI ACCGGT 1 cut(s) 97
BshVI ATCGAT 1 cut(s) 2172
BsiHKAI GWGCWC 2 cut(s) 1561, 1815
BsiSI CCGG 4 cut(s) 98, 201, 371, 998
BslFI GGGAC 4 cut(s) 124, 387, 728, 1681
BslI CCNNNNNNNGG 3 cut(s) 420, 778, 2136
BsmAI GTCTC 3 cut(s) 808, 1421, 2002
BsmBI CGTCTC 1 cut(s) 2002
BsmFI GGGAC 4 cut(s) 124, 387, 728, 1681
BsmI GAATGC 3 cut(s) 671, 677, 1290
BsnI GGCC 4 cut(s) 997, 1263, 2069, 2164
Bsp1286I GDGCHC 3 cut(s) 105, 1561, 1815
Bsp143I GATC 8 cut(s) 8, 939, 973, 1676, 1847, 1894, 1921, 2083
Bsp1720I GCTNAGC 1 cut(s) 1809
BspACI CCGC 1 cut(s) 388
BspANI GGCC 4 cut(s) 997, 1263, 2069, 2164
BspCNI CTCAG 1 cut(s) 1801
BspDI ATCGAT 1 cut(s) 2172
BspHI TCATGA 1 cut(s) 2119
BspLI GGNNCC 2 cut(s) 102, 1740
BspMAI CTGCAG 3 cut(s) 91, 1582, 1966
BspMI ACCTGC 1 cut(s) 575
BspOI GCTAGC 1 cut(s) 630
BspPI GGATC 6 cut(s) 3, 947, 968, 1842, 1902, 1916
BspT107I GGYRCC 1 cut(s) 100
BspTI CTTAAG 1 cut(s) 991
BsrDI GCAATG 2 cut(s) 153, 1458
BsrFI RCCGGY 2 cut(s) 97, 200
BsrI ACTGG 6 cut(s) 13, 19, 540, 800, 1825, 1832
BssAI RCCGGY 2 cut(s) 97, 200
BssECI CCNNGG 4 cut(s) 429, 1203, 1264, 2130
BssMI GATC 8 cut(s) 8, 939, 973, 1676, 1847, 1894, 1921, 2083
BssNI GRCGYC 1 cut(s) 838
BssSI CACGAG 1 cut(s) 286
BssT1I CCWWGG 2 cut(s) 1203, 1264
Bst2BI CACGAG 1 cut(s) 286
Bst2UI CCWGG 4 cut(s) 404, 431, 957, 1631
Bst4CI ACNGT 3 cut(s) 802, 1273, 2208
Bst6I CTCTTC 3 cut(s) 1497, 1947, 2091
BstACI GRCGYC 1 cut(s) 838
BstAFI CTTAAG 1 cut(s) 991
BstC8I GCNNGC 4 cut(s) 628, 652, 769, 1290
BstDEI CTNAG 3 cut(s) 660, 1423, 1809
BstF5I GGATG 3 cut(s) 896, 1067, 1639
BstHHI GCGC 1 cut(s) 767
BstKTI GATC 8 cut(s) 11, 942, 976, 1679, 1850, 1897, 1924, 2086
BstMAI GTCTC 3 cut(s) 808, 1421, 2002
BstMBI GATC 8 cut(s) 8, 939, 973, 1676, 1847, 1894, 1921, 2083
BstMWI GCNNNNNNNGC 7 cut(s) 376, 632, 656, 858, 1003, 1655, 1976
BstNI CCWGG 4 cut(s) 404, 431, 957, 1631
BstSCI CCNGG 5 cut(s) 370, 402, 429, 955, 1629
BstSFI CTRYAG 5 cut(s) 87, 220, 326, 1578, 1962
BstSLI GKGCMC 1 cut(s) 105
BstV2I GAAGAC 2 cut(s) 2178, 2225
BstX2I RGATCY 4 cut(s) 8, 939, 1847, 1921
BstYI RGATCY 4 cut(s) 8, 939, 1847, 1921
Bsu15I ATCGAT 1 cut(s) 2172
BsuRI GGCC 4 cut(s) 997, 1263, 2069, 2164
BsuTUI ATCGAT 1 cut(s) 2172
BtgZI GCGATG 1 cut(s) 843
BtsCI GGATG 3 cut(s) 896, 1067, 1639
BtsI GCAGTG 3 cut(s) 130, 661, 1033
BtsIMutI CAGTG 5 cut(s) 130, 360, 661, 1033, 2204
BveI ACCTGC 1 cut(s) 575
Cac8I GCNNGC 4 cut(s) 628, 652, 769, 1290
CciI TCATGA 1 cut(s) 2119
CfoI GCGC 1 cut(s) 767
Cfr10I RCCGGY 2 cut(s) 97, 200
Cfr13I GGNCC 2 cut(s) 1738, 2162
ClaI ATCGAT 1 cut(s) 2172
Csp6I GTAC 4 cut(s) 424, 1269, 1747, 1802
CspAI ACCGGT 1 cut(s) 97
CviAII CATG 6 cut(s) 887, 924, 1334, 1518, 2078, 2120
CviQI GTAC 4 cut(s) 424, 1269, 1747, 1802
DdeI CTNAG 3 cut(s) 660, 1423, 1809
DpnI GATC 8 cut(s) 10, 941, 975, 1678, 1849, 1896, 1923, 2085
DpnII GATC 8 cut(s) 8, 939, 973, 1676, 1847, 1894, 1921, 2083
DraIII CACNNNGTG 1 cut(s) 512
Eam1104I CTCTTC 3 cut(s) 1497, 1947, 2091
EarI CTCTTC 3 cut(s) 1497, 1947, 2091
Ecl136II GAGCTC 2 cut(s) 1559, 1813
Eco130I CCWWGG 2 cut(s) 1203, 1264
Eco147I AGGCCT 1 cut(s) 2069
Eco24I GRGCYC 2 cut(s) 1561, 1815
Eco32I GATATC 3 cut(s) 784, 901, 1609
Eco47I GGWCC 1 cut(s) 1738
Eco53kI GAGCTC 2 cut(s) 1559, 1813
Eco57I CTGAAG 1 cut(s) 1146
EcoICRI GAGCTC 2 cut(s) 1559, 1813
EcoO109I RGGNCCY 1 cut(s) 2162
EcoRI GAATTC 1 cut(s) 1454
EcoRII CCWGG 4 cut(s) 402, 429, 955, 1629
EcoRV GATATC 3 cut(s) 784, 901, 1609
EcoT14I CCWWGG 2 cut(s) 1203, 1264
EcoT22I ATGCAT 1 cut(s) 679
EcoT38I GRGCYC 2 cut(s) 1561, 1815
ErhI CCWWGG 2 cut(s) 1203, 1264
Esp3I CGTCTC 1 cut(s) 2002
FaeI CATG 6 cut(s) 890, 927, 1337, 1521, 2081, 2123
FalI AAGNNNNNCTT 4 cut(s) 1103, 1135, 1425, 1457
FaqI GGGAC 4 cut(s) 124, 387, 728, 1681
FatI CATG 6 cut(s) 886, 923, 1333, 1517, 2077, 2119
FbaI TGATCA 1 cut(s) 2083
FblI GTMKAC 2 cut(s) 841, 919
FokI GGATG 3 cut(s) 903, 1074, 1646
FriOI GRGCYC 2 cut(s) 1561, 1815
GlaI GCGC 1 cut(s) 766
GsuI CTGGAG 3 cut(s) 425, 523, 978
HaeIII GGCC 4 cut(s) 997, 1263, 2069, 2164
HapII CCGG 4 cut(s) 98, 201, 371, 998
HhaI GCGC 1 cut(s) 767
Hin1I GRCGYC 1 cut(s) 838
Hin1II CATG 6 cut(s) 890, 927, 1337, 1521, 2081, 2123
Hin6I GCGC 1 cut(s) 765
HinP1I GCGC 1 cut(s) 765
HincII GTYRAC 3 cut(s) 498, 920, 2211
HindII GTYRAC 3 cut(s) 498, 920, 2211
HindIII AAGCTT 2 cut(s) 125, 988
HinfI GANTC 5 cut(s) 113, 289, 441, 1246, 2221
HpaII CCGG 4 cut(s) 98, 201, 371, 998
HphI GGTGA 3 cut(s) 87, 740, 1178
Hpy166II GTNNAC 8 cut(s) 149, 498, 702, 842, 920, 1240, 1276, 2211
Hpy188I TCNGA 3 cut(s) 335, 781, 1480
Hpy8I GTNNAC 8 cut(s) 149, 498, 702, 842, 920, 1240, 1276, 2211
HpyAV CCTTC 6 cut(s) 179, 311, 358, 860, 1892, 1998
HpyCH4III ACNGT 3 cut(s) 802, 1273, 2208
HpyCH4IV ACGT 3 cut(s) 639, 741, 838
HpyF10VI GCNNNNNNNGC 7 cut(s) 376, 632, 656, 858, 1003, 1655, 1976
HpyF3I CTNAG 3 cut(s) 660, 1423, 1809
HpySE526I ACGT 3 cut(s) 639, 741, 838
Hsp92I GRCGYC 1 cut(s) 838
Hsp92II CATG 6 cut(s) 890, 927, 1337, 1521, 2081, 2123
HspAI GCGC 1 cut(s) 765
Ksp22I TGATCA 1 cut(s) 2083
Kzo9I GATC 8 cut(s) 8, 939, 973, 1676, 1847, 1894, 1921, 2083
LmnI GCTCC 4 cut(s) 406, 751, 762, 1147
LweI GCATC 2 cut(s) 1976, 2185
MaeII ACGT 3 cut(s) 639, 741, 838
MaeIII GTNAC 6 cut(s) 245, 530, 542, 932, 1018, 1930
MalI GATC 8 cut(s) 10, 941, 975, 1678, 1849, 1896, 1923, 2085
MboI GATC 8 cut(s) 8, 939, 973, 1676, 1847, 1894, 1921, 2083
MflI RGATCY 4 cut(s) 8, 939, 1847, 1921
MhlI GDGCHC 3 cut(s) 105, 1561, 1815
MlyI GAGTC 3 cut(s) 107, 298, 2215
MmeI TCCRAC 2 cut(s) 1125, 2022
Mph1103I ATGCAT 1 cut(s) 679
MroXI GAANNNNTTC 3 cut(s) 1115, 1118, 1506
MseI TTAA 8 cut(s) 554, 966, 992, 1197, 1233, 1817, 1991, 2064
MslI CAYNNNNRTG 3 cut(s) 449, 1233, 1395
MspA1I CMGCKG 1 cut(s) 1583
MspCI CTTAAG 1 cut(s) 991
MspI CCGG 4 cut(s) 98, 201, 371, 998
MspR9I CCNGG 5 cut(s) 372, 404, 431, 957, 1631
Mva1269I GAATGC 3 cut(s) 671, 677, 1290
MvaI CCWGG 4 cut(s) 404, 431, 957, 1631
MwoI GCNNNNNNNGC 7 cut(s) 376, 632, 656, 858, 1003, 1655, 1976
NciI CCSGG 1 cut(s) 372
NdeII GATC 8 cut(s) 8, 939, 973, 1676, 1847, 1894, 1921, 2083
NheI GCTAGC 1 cut(s) 626
NlaIII CATG 6 cut(s) 890, 927, 1337, 1521, 2081, 2123
NlaIV GGNNCC 2 cut(s) 102, 1740
NmeAIII GCCGAG 1 cut(s) 405
NmuCI GTSAC 1 cut(s) 530
NsiI ATGCAT 1 cut(s) 679
PagI TCATGA 1 cut(s) 2119
PceI AGGCCT 1 cut(s) 2069
PcsI WCGNNNNNNNCGW 1 cut(s) 785
PctI GAATGC 3 cut(s) 671, 677, 1290
PdmI GAANNNNTTC 3 cut(s) 1115, 1118, 1506
PfeI GAWTC 2 cut(s) 441, 1246
PflFI GACNNNGTC 1 cut(s) 740
PfoI TCCNGGA 2 cut(s) 955, 1629
PinAI ACCGGT 1 cut(s) 97
PleI GAGTC 3 cut(s) 107, 297, 2215
PpsI GAGTC 3 cut(s) 107, 297, 2215
Psp124BI GAGCTC 2 cut(s) 1561, 1815
Psp6I CCWGG 4 cut(s) 402, 429, 955, 1629
PspGI CCWGG 4 cut(s) 402, 429, 955, 1629
PspN4I GGNNCC 2 cut(s) 102, 1740
PspPI GGNCC 2 cut(s) 1738, 2162
PstI CTGCAG 3 cut(s) 91, 1582, 1966
PsuI RGATCY 4 cut(s) 8, 939, 1847, 1921
PsyI GACNNNGTC 1 cut(s) 740
PvuII CAGCTG 1 cut(s) 1583
RsaI GTAC 4 cut(s) 425, 1270, 1748, 1803
RsaNI GTAC 4 cut(s) 424, 1269, 1747, 1802
RseI CAYNNNNRTG 3 cut(s) 449, 1233, 1395
SacI GAGCTC 2 cut(s) 1561, 1815
SalI GTCGAC 1 cut(s) 918
SaqAI TTAA 8 cut(s) 554, 966, 992, 1197, 1233, 1817, 1991, 2064
Sau3AI GATC 8 cut(s) 8, 939, 973, 1676, 1847, 1894, 1921, 2083
Sau96I GGNCC 2 cut(s) 1738, 2162
ScaI AGTACT 1 cut(s) 1748
SchI GAGTC 3 cut(s) 107, 298, 2215
ScrFI CCNGG 5 cut(s) 372, 404, 431, 957, 1631
SduI GDGCHC 3 cut(s) 105, 1561, 1815
SfaNI GCATC 2 cut(s) 1976, 2185
SfcI CTRYAG 5 cut(s) 87, 220, 326, 1578, 1962
SgrAI CRCCGGYG 1 cut(s) 97
SinI GGWCC 1 cut(s) 1738
SmiMI CAYNNNNRTG 3 cut(s) 449, 1233, 1395
SmlI CTYRAG 2 cut(s) 991, 1926
SmoI CTYRAG 2 cut(s) 991, 1926
SpeI ACTAGT 3 cut(s) 41, 1327, 1711
SseBI AGGCCT 1 cut(s) 2069
SsiI CCGC 1 cut(s) 388
SstI GAGCTC 2 cut(s) 1561, 1815
StuI AGGCCT 1 cut(s) 2069
StyD4I CCNGG 5 cut(s) 370, 402, 429, 955, 1629
StyI CCWWGG 2 cut(s) 1203, 1264
TaaI ACNGT 3 cut(s) 802, 1273, 2208
TaiI ACGT 3 cut(s) 642, 744, 841
TaqI TCGA 8 cut(s) 116, 788, 919, 1545, 1603, 1675, 2172, 2193
TaqII GACCGA 1 cut(s) 709
TatI WGTACW 1 cut(s) 1746
TfiI GAWTC 2 cut(s) 441, 1246
Tru1I TTAA 8 cut(s) 554, 966, 992, 1197, 1233, 1817, 1991, 2064
Tru9I TTAA 8 cut(s) 554, 966, 992, 1197, 1233, 1817, 1991, 2064
TscAI CASTG 5 cut(s) 137, 367, 661, 1033, 2211
TseFI GTSAC 1 cut(s) 530
Tsp45I GTSAC 1 cut(s) 530
TspGWI ACGGA 2 cut(s) 1105, 1482
TspRI CASTG 5 cut(s) 137, 367, 661, 1033, 2211
Tth111I GACNNNGTC 1 cut(s) 740
Vha464I CTTAAG 1 cut(s) 991
VpaK11BI GGWCC 1 cut(s) 1738
XapI RAATTY 4 cut(s) 482, 1454, 1993, 2089
XbaI TCTAGA 2 cut(s) 5, 1918
XmiI GTMKAC 2 cut(s) 841, 919
XmnI GAANNNNTTC 3 cut(s) 1115, 1118, 1506
ZraI GACGTC 1 cut(s) 839
ZrmI AGTACT 1 cut(s) 1748
Zsp2I ATGCAT 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.