Rroxscaffold_2G00095560

wall-associated receptor kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000052
Physical Location & Seq
Forward (+)
16935479 .. 16938109
2631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00095560.1

Sequence Viewer

Length: 1527 bp
ATGGTACCTGTTCTGTTTTTACTTCATGTGATCACTCTGTTCTTGTGGTCTATGAGTACTATTGCGGCGCAGCCGGTAACAACTAACTTCACCTTTTCTAGTCTTGGCTGCGTTGATCAGCGAACTGCCGTCCTACCAGCCAACTTGAGCGAAAGCCCGTTCCTCTACTCCGAGAAAAACAAATTCACTGTAATTGGATGCGGTGGAATCACCTGGATGATGCTCTCCAACGGTTCAAAAGTTGGTGGCTGCCTGGCCACTTGTGACGGCAGTGATCCTGCACAACGTGAATTCCTTGATGGCTGCACAGATATCAATGAATGTGAAGATTCAGACCCATGTCCTGGTGCCAGCATTTGTATCAACGTTCGTGGTTCGTTTAGGTGCCAATCTCCGGATCAAACGGTTAAACTGGCAATTATTGGAGAAGTTTTTAAGCAGAATGGTGGTTTGCTGCTGGAGAAACAATCTTCTGGTGACGTTAATGTTGACAAAATTAAATTGTTCAATTCCGAGGAGTTGGAGAAAGCCACAGATAATTATAATGCAAACAGAATTCTAGGTCAAGGAGGCCATGGAACTGTTTACAAAGGCATGCTCGCAGATGGAAGCATTGTGGCGATAAAGAAGTCTAAAATAGTTGATGAAGGAGAAGTTGAACAATTCATTAATGAAATTGTTATTCTTTCACAAATAATTCATAGGAATGTGGTTAAATTAATGGGTTGTTGTTTAGAGACCGAAGTTCCCCTTCTAGTTTATGAATTCATACCAAATGGAACTCTTTCTCAGTATATTCATCACCAGAATGAGGAGTTTCCTCTTACATGGAGAGTGCGGTTGCGAGTTTCTATTGAAGTGGCAGGAGCTCTTTCCTACTTACACTCAGCAACTTCCTTTCCCATTTACCATCGAGATATCAAGACCTCCAACATACTCTTGGATGATAAATTTAGAGCTAAAGTTGCAGACTTTGGAACTTCCAGAACAGTTGCCATCGACAAAACACATCTTACCATGTCACAAGTTCAAGGAACATTTGGTTATTTAGACCCAGAGTACTTCCAGTCTAGCCAATTTACAGATAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTGTTGAACTTCTAACTGGGCAAAAGCCAGTTTCTCAGACGAGGCCAGAAGAGTGGAGAAGCCTGACAAATTATTTCCTTCTTTCAATGGAGGAGAATCGTCTGCTTGACATTCTTGATGCTCGAGTTATGAATGAAGGTGGCAAGGAAGAAATTATGGCAGTTGCACAGCTTGCAAGGCGTTGCTTGAATATGAAGGGAAAGAAGCGTCCTACTATGAAAGAAGTTGCAGTTCAATTGGAGGGAATATTTCAATTATCAGCAAAAGATTCTGACGTTCATACAAATTCAGCAGAGGTTGAATATGTCCTAAATGGATGGCATGTTGGTTCTACTTCAGCACGATATAACACAATCCATATTGGTAGTGGTTCTCCATCGGATGTAGAACCACTTATATATGTTTCTTGA

Protein Analysis

508

Amino Acids

56.22

Weight (kDa)

5.35

Isoelectric Point (pI)

37.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EGF_CA PF07645 104 - 130 5e-06 Calcium-binding EGF domain
Pkinase PF00069 181 - 448 2.9e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 184 - 452 3.1e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
Acc65I GGTACC 1 cut(s) 4
AccB1I GGYRCC 3 cut(s) 4, 347, 384
AccB7I CCANNNNNTGG 1 cut(s) 344
AccIII TCCGGA 1 cut(s) 394
AciI CCGC 3 cut(s) 65, 201, 838
AclI AACGTT 1 cut(s) 366
AclWI GGATC 2 cut(s) 269, 405
AcoI YGGCCR 1 cut(s) 255
AcsI RAATTY 6 cut(s) 182, 290, 555, 764, 950, 1402
AcuI CTGAAG 1 cut(s) 1437
AdeI CACNNNGTG 1 cut(s) 287
AfaI GTAC 3 cut(s) 6, 58, 1061
AfiI CCNNNNNNNGG 3 cut(s) 344, 394, 811
AjnI CCWGG 3 cut(s) 212, 252, 343
AluBI AGCT 4 cut(s) 869, 959, 1104, 1288
AluI AGCT 4 cut(s) 869, 959, 1104, 1288
Alw21I GWGCWC 1 cut(s) 871
Alw26I GTCTC 1 cut(s) 731
AlwI GGATC 2 cut(s) 269, 405
Ama87I CYCGRG 1 cut(s) 1239
Aor13HI TCCGGA 1 cut(s) 394
AoxI GGCC 3 cut(s) 255, 571, 1160
ApeKI GCWGC 5 cut(s) 70, 108, 249, 303, 454
ApoI RAATTY 6 cut(s) 182, 290, 555, 764, 950, 1402
AseI ATTAAT 2 cut(s) 669, 719
Asp700I GAANNNNTTC 1 cut(s) 784
Asp718I GGTACC 1 cut(s) 4
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 1 cut(s) 1114
AsuHPI GGTGA 4 cut(s) 82, 202, 488, 794
AvaI CYCGRG 1 cut(s) 1239
AvaII GGWCC 1 cut(s) 1114
BalI TGGCCA 1 cut(s) 257
BanI GGYRCC 3 cut(s) 4, 347, 384
BanII GRGCYC 1 cut(s) 871
Bbv12I GWGCWC 1 cut(s) 871
BbvI GCAGC 5 cut(s) 82, 95, 236, 290, 441
BccI CCATC 6 cut(s) 293, 599, 918, 1004, 1428, 1501
BceAI ACGGC 2 cut(s) 113, 283
BciT130I CCWGG 3 cut(s) 214, 254, 345
BclI TGATCA 2 cut(s) 30, 115
BcoDI GTCTC 1 cut(s) 731
BfaI CTAG 4 cut(s) 99, 560, 755, 1071
BisI GCNGC 6 cut(s) 66, 71, 109, 250, 304, 455
BlsI GCNGC 6 cut(s) 67, 72, 110, 251, 305, 456
BmcAI AGTACT 2 cut(s) 58, 1061
Bme1390I CCNGG 3 cut(s) 214, 254, 345
Bme18I GGWCC 1 cut(s) 1114
BmeT110I CYCGRG 1 cut(s) 1239
BmgT120I GGNCC 1 cut(s) 1114
BmiI GGNNCC 3 cut(s) 6, 349, 386
BmrFI CCNGG 3 cut(s) 214, 254, 345
BmrI ACTGGG 1 cut(s) 1143
BmsI GCATC 3 cut(s) 188, 210, 1225
BmuI ACTGGG 1 cut(s) 1143
BoxI GACNNNNGTC 1 cut(s) 339
BpmI CTGGAG 1 cut(s) 479
BpuEI CTTGAG 1 cut(s) 166
BsaI GGTCTC 1 cut(s) 731
BsaJI CCNNGG 2 cut(s) 513, 574
BsaWI WCCGGW 1 cut(s) 394
Bsc4I CCNNNNNNNGG 3 cut(s) 344, 394, 811
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 4 cut(s) 417, 1066, 1138, 1145
BseAI TCCGGA 1 cut(s) 394
BseBI CCWGG 3 cut(s) 214, 254, 345
BseDI CCNNGG 2 cut(s) 513, 574
BseGI GGATG 5 cut(s) 203, 222, 949, 1439, 1504
BseLI CCNNNNNNNGG 3 cut(s) 344, 394, 811
BseMII CTCAG 3 cut(s) 803, 900, 1166
BseNI ACTGG 4 cut(s) 417, 1066, 1138, 1145
BseRI GAGGAG 3 cut(s) 530, 827, 1223
BseXI GCAGC 5 cut(s) 82, 95, 236, 290, 441
BsgI GTGCAG 2 cut(s) 264, 289
BshFI GGCC 3 cut(s) 257, 573, 1162
BshNI GGYRCC 3 cut(s) 4, 347, 384
BsiHKAI GWGCWC 1 cut(s) 871
BsiHKCI CYCGRG 1 cut(s) 1239
BsiSI CCGG 2 cut(s) 74, 395
BslI CCNNNNNNNGG 3 cut(s) 344, 394, 811
BsmAI GTCTC 1 cut(s) 731
BsnI GGCC 3 cut(s) 257, 573, 1162
Bso31I GGTCTC 1 cut(s) 731
BsoBI CYCGRG 1 cut(s) 1239
Bsp1286I GDGCHC 1 cut(s) 871
Bsp13I TCCGGA 1 cut(s) 394
Bsp143I GATC 4 cut(s) 30, 115, 274, 397
Bsp19I CCATGG 1 cut(s) 574
BspACI CCGC 3 cut(s) 65, 201, 838
BspANI GGCC 3 cut(s) 257, 573, 1162
BspCNI CTCAG 3 cut(s) 802, 899, 1165
BspEI TCCGGA 1 cut(s) 394
BspLI GGNNCC 3 cut(s) 6, 349, 386
BspPI GGATC 2 cut(s) 269, 405
BspT107I GGYRCC 3 cut(s) 4, 347, 384
BspTNI GGTCTC 1 cut(s) 731
BsrFI RCCGGY 1 cut(s) 73
BsrI ACTGG 4 cut(s) 417, 1066, 1138, 1145
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 2 cut(s) 513, 574
BssMI GATC 4 cut(s) 30, 115, 274, 397
BssT1I CCWWGG 1 cut(s) 574
Bst2UI CCWGG 3 cut(s) 214, 254, 345
Bst4CI ACNGT 5 cut(s) 190, 233, 406, 583, 991
Bst6I CTCTTC 1 cut(s) 1161
BstAPI GCANNNNNTGC 1 cut(s) 1289
BstC8I GCNNGC 4 cut(s) 352, 596, 600, 1290
BstDEI CTNAG 3 cut(s) 789, 886, 1152
BstDSI CCRYGG 1 cut(s) 574
BstF5I GGATG 5 cut(s) 203, 222, 949, 1439, 1504
BstHHI GCGC 1 cut(s) 70
BstKTI GATC 4 cut(s) 33, 118, 277, 400
BstMAI GTCTC 1 cut(s) 731
BstMBI GATC 4 cut(s) 30, 115, 274, 397
BstMWI GCNNNNNNNGC 3 cut(s) 965, 1289, 1294
BstNI CCWGG 3 cut(s) 214, 254, 345
BstNSI RCATGY 2 cut(s) 598, 1442
BstPAI GACNNNNGTC 1 cut(s) 339
BstSCI CCNGG 3 cut(s) 212, 252, 343
BstV1I GCAGC 5 cut(s) 82, 95, 236, 290, 441
BstXI CCANNNNNNTGG 1 cut(s) 1170
BsuRI GGCC 3 cut(s) 257, 573, 1162
BtgI CCRYGG 1 cut(s) 574
BtsCI GGATG 5 cut(s) 203, 222, 949, 1439, 1504
BtsI GCAGTG 1 cut(s) 277
BtsIMutI CAGTG 2 cut(s) 186, 277
Cac8I GCNNGC 4 cut(s) 352, 596, 600, 1290
CfoI GCGC 1 cut(s) 70
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 1 cut(s) 1114
CseI GACGC 1 cut(s) 1313
Csp6I GTAC 3 cut(s) 5, 57, 1060
CspCI CAANNNNNGTGG 2 cut(s) 352, 387
CviAII CATG 7 cut(s) 26, 339, 575, 595, 828, 1018, 1439
CviQI GTAC 3 cut(s) 5, 57, 1060
DdeI CTNAG 3 cut(s) 789, 886, 1152
DpnI GATC 4 cut(s) 32, 117, 276, 399
DpnII GATC 4 cut(s) 30, 115, 274, 397
DraIII CACNNNGTG 1 cut(s) 287
EaeI YGGCCR 1 cut(s) 255
Eam1104I CTCTTC 1 cut(s) 1161
EarI CTCTTC 1 cut(s) 1161
Ecl136II GAGCTC 1 cut(s) 869
Eco130I CCWWGG 1 cut(s) 574
Eco24I GRGCYC 1 cut(s) 871
Eco31I GGTCTC 1 cut(s) 731
Eco32I GATATC 2 cut(s) 313, 919
Eco47I GGWCC 1 cut(s) 1114
Eco53kI GAGCTC 1 cut(s) 869
Eco57I CTGAAG 1 cut(s) 1437
Eco88I CYCGRG 1 cut(s) 1239
EcoICRI GAGCTC 1 cut(s) 869
EcoRI GAATTC 3 cut(s) 290, 555, 764
EcoRII CCWGG 3 cut(s) 212, 252, 343
EcoRV GATATC 2 cut(s) 313, 919
EcoT14I CCWWGG 1 cut(s) 574
EcoT38I GRGCYC 1 cut(s) 871
ErhI CCWWGG 1 cut(s) 574
FaeI CATG 7 cut(s) 29, 342, 578, 598, 831, 1021, 1442
FalI AAGNNNNNCTT 2 cut(s) 735, 767
FatI CATG 7 cut(s) 25, 338, 574, 594, 827, 1017, 1438
FbaI TGATCA 2 cut(s) 30, 115
Fnu4HI GCNGC 6 cut(s) 66, 71, 109, 250, 304, 455
FokI GGATG 5 cut(s) 210, 229, 956, 1446, 1511
FriOI GRGCYC 1 cut(s) 871
Fsp4HI GCNGC 6 cut(s) 66, 71, 109, 250, 304, 455
FspBI CTAG 4 cut(s) 99, 560, 755, 1071
GlaI GCGC 1 cut(s) 69
GluI GCNGC 6 cut(s) 66, 71, 109, 250, 304, 455
GsuI CTGGAG 1 cut(s) 479
HaeIII GGCC 3 cut(s) 257, 573, 1162
HapII CCGG 2 cut(s) 74, 395
HgaI GACGC 1 cut(s) 1313
HhaI GCGC 1 cut(s) 70
Hin1II CATG 7 cut(s) 29, 342, 578, 598, 831, 1021, 1442
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HinfI GANTC 4 cut(s) 207, 329, 1213, 1385
HpaII CCGG 2 cut(s) 74, 395
HphI GGTGA 4 cut(s) 82, 202, 488, 794
Hpy166II GTNNAC 2 cut(s) 490, 586
Hpy188I TCNGA 6 cut(s) 172, 334, 514, 1155, 1390, 1498
Hpy188III TCNNGA 6 cut(s) 395, 914, 922, 984, 1232, 1524
Hpy8I GTNNAC 2 cut(s) 490, 586
HpyAV CCTTC 5 cut(s) 641, 761, 1205, 1247, 1306
HpyCH4III ACNGT 5 cut(s) 190, 233, 406, 583, 991
HpyCH4IV ACGT 4 cut(s) 286, 366, 480, 1392
HpyCH4V TGCA 7 cut(s) 281, 306, 548, 968, 1283, 1292, 1346
HpyF10VI GCNNNNNNNGC 3 cut(s) 965, 1289, 1294
HpyF3I CTNAG 3 cut(s) 789, 886, 1152
HpySE526I ACGT 4 cut(s) 286, 366, 480, 1392
Hsp92II CATG 7 cut(s) 29, 342, 578, 598, 831, 1021, 1442
HspAI GCGC 1 cut(s) 68
Kpn2I TCCGGA 1 cut(s) 394
KpnI GGTACC 1 cut(s) 8
Ksp22I TGATCA 2 cut(s) 30, 115
Kzo9I GATC 4 cut(s) 30, 115, 274, 397
LmnI GCTCC 1 cut(s) 866
Lsp1109I GCAGC 5 cut(s) 82, 95, 236, 290, 441
LweI GCATC 3 cut(s) 188, 210, 1225
MaeI CTAG 4 cut(s) 99, 560, 755, 1071
MaeII ACGT 4 cut(s) 286, 366, 480, 1392
MaeIII GTNAC 4 cut(s) 76, 263, 476, 1020
MalI GATC 4 cut(s) 32, 117, 276, 399
MboI GATC 4 cut(s) 30, 115, 274, 397
MboII GAAGA 4 cut(s) 338, 462, 1178, 1277
MfeI CAATTG 1 cut(s) 1352
MhlI GDGCHC 1 cut(s) 871
MlsI TGGCCA 1 cut(s) 257
MluNI TGGCCA 1 cut(s) 257
MmeI TCCRAC 3 cut(s) 252, 501, 954
Mox20I TGGCCA 1 cut(s) 257
MroI TCCGGA 1 cut(s) 394
MroXI GAANNNNTTC 1 cut(s) 784
MscI TGGCCA 1 cut(s) 257
MseI TTAA 7 cut(s) 408, 435, 483, 498, 669, 714, 719
MslI CAYNNNNRTG 3 cut(s) 215, 705, 807
Msp20I TGGCCA 1 cut(s) 257
MspI CCGG 2 cut(s) 74, 395
MspR9I CCNGG 3 cut(s) 214, 254, 345
MunI CAATTG 1 cut(s) 1352
MvaI CCWGG 3 cut(s) 214, 254, 345
MwoI GCNNNNNNNGC 3 cut(s) 965, 1289, 1294
NcoI CCATGG 1 cut(s) 574
NdeII GATC 4 cut(s) 30, 115, 274, 397
NlaIII CATG 7 cut(s) 29, 342, 578, 598, 831, 1021, 1442
NlaIV GGNNCC 3 cut(s) 6, 349, 386
NmuCI GTSAC 3 cut(s) 263, 476, 1020
NspI RCATGY 2 cut(s) 598, 1442
PaeI GCATGC 1 cut(s) 598
PaeR7I CTCGAG 1 cut(s) 1239
PdmI GAANNNNTTC 1 cut(s) 784
PfeI GAWTC 4 cut(s) 207, 329, 1213, 1385
PflMI CCANNNNNTGG 1 cut(s) 344
PkrI GCNGC 6 cut(s) 67, 72, 110, 251, 305, 456
PshAI GACNNNNGTC 1 cut(s) 339
PshBI ATTAAT 2 cut(s) 669, 719
PsiI TTATAA 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 871
Psp1406I AACGTT 1 cut(s) 366
Psp6I CCWGG 3 cut(s) 212, 252, 343
PspGI CCWGG 3 cut(s) 212, 252, 343
PspN4I GGNNCC 3 cut(s) 6, 349, 386
PspPI GGNCC 1 cut(s) 1114
PspXI VCTCGAGB 1 cut(s) 1239
RsaI GTAC 3 cut(s) 6, 58, 1061
RsaNI GTAC 3 cut(s) 5, 57, 1060
RseI CAYNNNNRTG 3 cut(s) 215, 705, 807
SacI GAGCTC 1 cut(s) 871
SaqAI TTAA 7 cut(s) 408, 435, 483, 498, 669, 714, 719
SatI GCNGC 6 cut(s) 66, 71, 109, 250, 304, 455
Sau3AI GATC 4 cut(s) 30, 115, 274, 397
Sau96I GGNCC 1 cut(s) 1114
ScaI AGTACT 2 cut(s) 58, 1061
ScrFI CCNGG 3 cut(s) 214, 254, 345
SduI GDGCHC 1 cut(s) 871
SfaNI GCATC 3 cut(s) 188, 210, 1225
Sfr274I CTCGAG 1 cut(s) 1239
SinI GGWCC 1 cut(s) 1114
SlaI CTCGAG 1 cut(s) 1239
SmiMI CAYNNNNRTG 3 cut(s) 215, 705, 807
SmlI CTYRAG 2 cut(s) 145, 1239
SmoI CTYRAG 2 cut(s) 145, 1239
SphI GCATGC 1 cut(s) 598
SsiI CCGC 3 cut(s) 65, 201, 838
SspI AATATT 1 cut(s) 1365
SspMI CTAG 4 cut(s) 99, 560, 755, 1071
SstI GAGCTC 1 cut(s) 871
StyD4I CCNGG 3 cut(s) 212, 252, 343
StyI CCWWGG 1 cut(s) 574
TaaI ACNGT 5 cut(s) 190, 233, 406, 583, 991
TaiI ACGT 4 cut(s) 289, 369, 483, 1395
TaqI TCGA 3 cut(s) 913, 999, 1240
TaqII GACCGA 1 cut(s) 755
TatI WGTACW 2 cut(s) 56, 1059
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 4 cut(s) 207, 329, 1213, 1385
Tru1I TTAA 7 cut(s) 408, 435, 483, 498, 669, 714, 719
Tru9I TTAA 7 cut(s) 408, 435, 483, 498, 669, 714, 719
TscAI CASTG 2 cut(s) 193, 277
TseFI GTSAC 3 cut(s) 263, 476, 1020
TseI GCWGC 5 cut(s) 70, 108, 249, 303, 454
Tsp45I GTSAC 3 cut(s) 263, 476, 1020
TspRI CASTG 2 cut(s) 193, 277
Van91I CCANNNNNTGG 1 cut(s) 344
VpaK11BI GGWCC 1 cut(s) 1114
VspI ATTAAT 2 cut(s) 669, 719
XapI RAATTY 6 cut(s) 182, 290, 555, 764, 950, 1402
XceI RCATGY 2 cut(s) 598, 1442
XcmI CCANNNNNNNNNTGG 2 cut(s) 937, 1481
XhoI CTCGAG 1 cut(s) 1239
XmnI GAANNNNTTC 1 cut(s) 784
XspI CTAG 4 cut(s) 99, 560, 755, 1071
ZrmI AGTACT 2 cut(s) 58, 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.