Rh6AG247500

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
43629317 .. 43637293
7977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG247500.1

Sequence Viewer

Length: 2262 bp
ATGATGATGCAAATGCTAGTTCATCAAATGATCTTCATTTTGCTGTTATCCATATGCCGCGCAAGTGCTGCTGCACCACAGATGGCAAAGCGTGATTGCCCAAAGAAGTGTGGAAATGTTACCATCCCGTATCCTTTCGGGATTGGACCTGATGAAAGTTGTTACTATGACGAATGGTTTCAAATCGACTGCAACGAATCTAGTCAATCTACCGAGGGGATGCCTTTCTTGAGGCTTACCAAATTGGAGGTGCTGAATATAACCGATGGATGGATGCTGGTGAACAGCCCCGTTACATTCTTCTGCGAGGGAGATAATAGTAGCCAACTGGCGGATTTAAGGGACAGCCCTTTCGTCTACTCTCGAAGCTACAACATATTCACTGCAGTGAGTTGCAATACCTTTGCCTTGTTGAGTTCCGCAGACTTTGTTGCTGGCGGATGCAGGTCAGTGTGTGATCAAGATTCTGAATACCTGAATTGCGATATCGGTATGAACTGTTGTCAGACTAGTATTCCTCCATACCTCAGTGTTATTAAAACTACCTTATATGAGAATACTACAAATTGCACCAAGTTTGCCTTCCTGATTGACAAAGATTGGGTTGAGAGAAACCGCAGTTTATTATCAACAATTTCGGGCCTTGCAGCTCTCTTGAAGAAAATGGGCAAGGTTCCTGTGACACTAAGATGGCGCATTATCAACGACACTAAGTCATTTGAATTATTTAACCAGTTCATTGACGACGGTAAATTCTCAAGGGTCAATTTGTCCCAAAGCGTTGACCCATTTTGCTATATTGACACTCCCGTAGTCAATCGGTCAGAAATTAATTGTTACTGCCAAGAGGGGTTCGAAGGAAATCCGTATCTCGGGGGAAATTTTTGTTATGACATTGATGAATGCCAGGTTCCTGACCGATGCATTGGCCTCAACAAATGCGTGAACGAGTATGGTTCGTACCGATGTAAGGACGACAGGAGTATGGACGACAGGAGTAAGGACGACGGGAGTAAGGCTAAATTGATCCTTGCCGCAGGTTTGAGCTCGAGCCTTGGACTCTTATTGTTTCTTATTGGTGTATGGTTTGGATACAAACTCTTGAAGAAAAAGAATGAGATCAAACGAAAAAAGATGTTCTTCAAGCGAAATGGTGGTTTATTATTAGAACAACAATTATCGTCAGGTGAAGTTAATGTCGAGAAAATTAAATTGTTCAAATCAAATGAGTTAGAGAAGTCTACCGATAATTTTAATGTGGATAGAATTCTTGGCCAAGGAGGTCAAGGTACTGTATACAAAGGCATGTTGGAGGACGGGAGAATTGTTGCTGTGAAGAAGTCTAAAATAGTTGATGAAAGCCAACTTTCAGAATTCATCAATGAGATTGTCATTCTTTCCCAAATTAACCATAGAAATGTGGTTCAACTATTGGGTTGTTGTTTAGAGACAGAAGTTCCTCTTTTGGTTTATGAATTTATACCAAATGGTACCCTTTCCAAATATATCACAGAGCAGGTTGAAGACTTTCCACTTACATGGAAAATGCGCTTACGAATTGCCACAGAAATTGCAGGAGCTCTCTCGTACTTACACTATACAGCTTCCTTTCCAATTTATCATAGAGATATCAAGTCGACAAACATACTCTTAGATGATAAATACAGAGCAAAAGTTGCTGACTTTGGAACTTCGAGATCAATTGCTATTGACCAAACTCACCTGACCACATCACTTGTACATGGCACATTCGGTTACTTAGACCCTGAATACTTTCAGTCAAGTCAATTTACAGAGAAAAGTGATGTTTATAGCTTTGGGGTTGTTCTTGTTGAGCTCTTAACAGGACAAAAACCAATTTCTTTTAAAAGGTCTGAGGATGATGAAGGCAGAAGTCTTGCCACATATTTTATTATTTCCATGCACAAAGATCGTCTATTTGAAATTGTTGATGCTCAAGTTTTGAAGGAAGGATCGAAAGCAGATATCATAATAGTGGCAAACCTTGCAAGAAGATGCCTAAATTTAAAAGGAAGGAAGCGCCCTACAATGAGAGAGGTCACAGCTGAGCTAGAAGTGATTCAAATGACAGAAAACACTTCTATTGGAGAACAAAACTATGAAGAGGTTGAATTTGTCAGAACTGAATCAGTCGAGCCATGGGATATTGCTTCAAGTTCAACGGGAACAGGATCAGCTTCGGATGTTAGTCAGGTTTCATCATTTCATAAAATCCCCCTATTATCTTTCAAGTCAAGGTGA

Protein Analysis

753

Amino Acids

84.97

Weight (kDa)

5.53

Isoelectric Point (pI)

40.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 88 1.3e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 418 - 688 1.7e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 420 - 691 5.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 435, 1028, 1507
Acc65I GGTACC 1 cut(s) 1490
AccB1I GGYRCC 1 cut(s) 1490
AccI GTMKAC 4 cut(s) 357, 1241, 1296, 1637
AccII CGCG 1 cut(s) 60
AciI CCGC 6 cut(s) 58, 332, 420, 438, 616, 1035
AclWI GGATC 3 cut(s) 1021, 1981, 2200
AcoI YGGCCR 1 cut(s) 1273
AcsI RAATTY 7 cut(s) 752, 880, 1266, 1373, 1475, 2023, 2132
AfaI GTAC 5 cut(s) 962, 1291, 1492, 1589, 1740
AfiI CCNNNNNNNGG 4 cut(s) 270, 331, 872, 970
AhdI GACNNNNNGTC 1 cut(s) 712
AhlI ACTAGT 1 cut(s) 509
AjnI CCWGG 1 cut(s) 906
AjuI GAANNNNNNNTTGG 2 cut(s) 566, 598
AleI CACNNNNGTG 1 cut(s) 386
Alw21I GWGCWC 3 cut(s) 1049, 1582, 1839
Alw26I GTCTC 1 cut(s) 1442
AlwI GGATC 3 cut(s) 1021, 1981, 2200
Ama87I CYCGRG 2 cut(s) 872, 1048
AoxI GGCC 3 cut(s) 640, 928, 1273
ApeKI GCWGC 3 cut(s) 68, 71, 647
ApoI RAATTY 7 cut(s) 752, 880, 1266, 1373, 1475, 2023, 2132
ArsI GACNNNNNNTTYG 2 cut(s) 335, 367
AseI ATTAAT 1 cut(s) 831
Asp700I GAANNNNTTC 4 cut(s) 177, 1527, 1773, 2079
Asp718I GGTACC 1 cut(s) 1490
AspLEI GCGC 4 cut(s) 62, 696, 1551, 2043
AspS9I GGNCC 2 cut(s) 146, 640
AsuHPI GGTGA 3 cut(s) 292, 1199, 1712
AsuII TTCGAA 1 cut(s) 855
AvaI CYCGRG 2 cut(s) 872, 1048
AvaII GGWCC 1 cut(s) 146
BalI TGGCCA 1 cut(s) 1275
BanI GGYRCC 1 cut(s) 1490
BanII GRGCYC 3 cut(s) 1049, 1582, 1839
BbsI GAAGAC 1 cut(s) 1530
Bbv12I GWGCWC 3 cut(s) 1049, 1582, 1839
BbvI GCAGC 3 cut(s) 55, 58, 659
BccI CCATC 5 cut(s) 76, 131, 260, 264, 684
BcgI CGANNNNNNTGC 2 cut(s) 1913, 1947
BciT130I CCWGG 1 cut(s) 908
BciVI GTATCC 2 cut(s) 141, 1085
BclI TGATCA 1 cut(s) 457
BcoDI GTCTC 1 cut(s) 1442
BcuI ACTAGT 1 cut(s) 509
BfaI CTAG 4 cut(s) 17, 201, 510, 2072
BfmI CTRYAG 1 cut(s) 384
BfoI RGCGCY 1 cut(s) 2044
BfuAI ACCTGC 3 cut(s) 435, 1028, 1507
BfuI GTATCC 2 cut(s) 141, 1085
BisI GCNGC 5 cut(s) 58, 69, 72, 648, 1035
BlpI GCTNAGC 1 cut(s) 2067
BlsI GCNGC 5 cut(s) 59, 70, 73, 649, 1036
Bme1390I CCNGG 1 cut(s) 908
Bme18I GGWCC 1 cut(s) 146
BmeRI GACNNNNNGTC 1 cut(s) 712
BmeT110I CYCGRG 2 cut(s) 872, 1048
BmgT120I GGNCC 2 cut(s) 146, 640
BmiI GGNNCC 3 cut(s) 675, 912, 1492
BmrFI CCNGG 1 cut(s) 908
BmsI GCATC 6 cut(s) 210, 264, 431, 911, 1942, 2006
BpiI GAAGAC 1 cut(s) 1530
Bpu1102I GCTNAGC 1 cut(s) 2067
Bpu14I TTCGAA 1 cut(s) 855
BpuEI CTTGAG 3 cut(s) 250, 742, 1941
BsaJI CCNNGG 4 cut(s) 213, 1054, 1276, 2159
Bsc4I CCNNNNNNNGG 4 cut(s) 270, 331, 872, 970
Bse1I ACTGG 2 cut(s) 333, 733
BseBI CCWGG 1 cut(s) 908
BseDI CCNNGG 4 cut(s) 213, 1054, 1276, 2159
BseGI GGATG 7 cut(s) 123, 225, 275, 279, 446, 1885, 2209
BseLI CCNNNNNNNGG 4 cut(s) 270, 331, 872, 970
BseMII CTCAG 3 cut(s) 541, 1866, 2058
BseNI ACTGG 2 cut(s) 333, 733
BseXI GCAGC 3 cut(s) 55, 58, 659
BsgI GTGCAG 1 cut(s) 57
Bsh1236I CGCG 1 cut(s) 60
BshFI GGCC 3 cut(s) 642, 930, 1275
BshNI GGYRCC 1 cut(s) 1490
BsiHKAI GWGCWC 3 cut(s) 1049, 1582, 1839
BsiHKCI CYCGRG 2 cut(s) 872, 1048
BslFI GGGAC 2 cut(s) 356, 757
BslI CCNNNNNNNGG 4 cut(s) 270, 331, 872, 970
BsmAI GTCTC 1 cut(s) 1442
BsmFI GGGAC 2 cut(s) 356, 757
BsmI GAATGC 1 cut(s) 908
BsnI GGCC 3 cut(s) 642, 930, 1275
BsoBI CYCGRG 2 cut(s) 872, 1048
Bsp119I TTCGAA 1 cut(s) 855
Bsp1286I GDGCHC 3 cut(s) 1049, 1582, 1839
Bsp1407I TGTACA 1 cut(s) 1738
Bsp143I GATC 8 cut(s) 30, 457, 1026, 1119, 1697, 1930, 1973, 2192
Bsp1720I GCTNAGC 1 cut(s) 2067
Bsp19I CCATGG 1 cut(s) 2159
BspACI CCGC 6 cut(s) 58, 332, 420, 438, 616, 1035
BspANI GGCC 3 cut(s) 642, 930, 1275
BspCNI CTCAG 3 cut(s) 540, 1867, 2059
BspFNI CGCG 1 cut(s) 60
BspLI GGNNCC 3 cut(s) 675, 912, 1492
BspMAI CTGCAG 1 cut(s) 388
BspMI ACCTGC 3 cut(s) 435, 1028, 1507
BspPI GGATC 3 cut(s) 1021, 1981, 2200
BspT104I TTCGAA 1 cut(s) 855
BspT107I GGYRCC 1 cut(s) 1490
BsrGI TGTACA 1 cut(s) 1738
BsrI ACTGG 2 cut(s) 333, 733
BssECI CCNNGG 4 cut(s) 213, 1054, 1276, 2159
BssMI GATC 8 cut(s) 30, 457, 1026, 1119, 1697, 1930, 1973, 2192
BssNAI GTATAC 1 cut(s) 1297
BssT1I CCWWGG 3 cut(s) 1054, 1276, 2159
Bst1107I GTATAC 1 cut(s) 1297
Bst2UI CCWGG 1 cut(s) 908
Bst4CI ACNGT 3 cut(s) 500, 749, 1294
Bst6I CTCTTC 1 cut(s) 2118
BstAPI GCANNNNNTGC 3 cut(s) 68, 1676, 2006
BstAUI TGTACA 1 cut(s) 1738
BstBI TTCGAA 1 cut(s) 855
BstC8I GCNNGC 1 cut(s) 436
BstDEI CTNAG 7 cut(s) 527, 686, 711, 1651, 1759, 1875, 2067
BstDSI CCRYGG 1 cut(s) 2159
BstF5I GGATG 7 cut(s) 123, 225, 275, 279, 446, 1885, 2209
BstFNI CGCG 1 cut(s) 60
BstH2I RGCGCY 1 cut(s) 2044
BstHHI GCGC 4 cut(s) 62, 696, 1551, 2043
BstKTI GATC 8 cut(s) 33, 460, 1029, 1122, 1700, 1933, 1976, 2195
BstMAI GTCTC 1 cut(s) 1442
BstMBI GATC 8 cut(s) 30, 457, 1026, 1119, 1697, 1930, 1973, 2192
BstMWI GCNNNNNNNGC 3 cut(s) 68, 1676, 2006
BstNI CCWGG 1 cut(s) 908
BstNSI RCATGY 1 cut(s) 1309
BstSCI CCNGG 1 cut(s) 906
BstSFI CTRYAG 1 cut(s) 384
BstUI CGCG 1 cut(s) 60
BstV1I GCAGC 3 cut(s) 55, 58, 659
BstV2I GAAGAC 1 cut(s) 1530
BstXI CCANNNNNNTGG 1 cut(s) 1539
BstZ17I GTATAC 1 cut(s) 1297
BsuI GTATCC 2 cut(s) 141, 1085
BsuRI GGCC 3 cut(s) 642, 930, 1275
BtgI CCRYGG 1 cut(s) 2159
BtsCI GGATG 7 cut(s) 123, 225, 275, 279, 446, 1885, 2209
BtsI GCAGTG 2 cut(s) 381, 393
BtsIMutI CAGTG 4 cut(s) 381, 393, 456, 535
BveI ACCTGC 3 cut(s) 435, 1028, 1507
Cac8I GCNNGC 1 cut(s) 436
CfoI GCGC 4 cut(s) 62, 696, 1551, 2043
Cfr13I GGNCC 2 cut(s) 146, 640
Csp6I GTAC 5 cut(s) 961, 1290, 1491, 1588, 1739
CspCI CAANNNNNGTGG 4 cut(s) 1552, 1587, 1717, 1752
CviAII CATG 5 cut(s) 1306, 1539, 1742, 1921, 2160
CviQI GTAC 5 cut(s) 961, 1290, 1491, 1588, 1739
DdeI CTNAG 7 cut(s) 527, 686, 711, 1651, 1759, 1875, 2067
DpnI GATC 8 cut(s) 32, 459, 1028, 1121, 1699, 1932, 1975, 2194
DpnII GATC 8 cut(s) 30, 457, 1026, 1119, 1697, 1930, 1973, 2192
DraI TTTAAA 2 cut(s) 1867, 2028
DriI GACNNNNNGTC 1 cut(s) 712
EaeI YGGCCR 1 cut(s) 1273
Eam1104I CTCTTC 1 cut(s) 2118
Eam1105I GACNNNNNGTC 1 cut(s) 712
EarI CTCTTC 1 cut(s) 2118
EciI GGCGGA 2 cut(s) 347, 453
Ecl136II GAGCTC 3 cut(s) 1047, 1580, 1837
Eco130I CCWWGG 3 cut(s) 1054, 1276, 2159
Eco24I GRGCYC 3 cut(s) 1049, 1582, 1839
Eco32I GATATC 3 cut(s) 487, 1630, 1987
Eco47I GGWCC 1 cut(s) 146
Eco53kI GAGCTC 3 cut(s) 1047, 1580, 1837
Eco88I CYCGRG 2 cut(s) 872, 1048
EcoICRI GAGCTC 3 cut(s) 1047, 1580, 1837
EcoRI GAATTC 2 cut(s) 1266, 1373
EcoRII CCWGG 1 cut(s) 906
EcoRV GATATC 3 cut(s) 487, 1630, 1987
EcoT14I CCWWGG 3 cut(s) 1054, 1276, 2159
EcoT22I ATGCAT 1 cut(s) 926
EcoT38I GRGCYC 3 cut(s) 1049, 1582, 1839
ErhI CCWWGG 3 cut(s) 1054, 1276, 2159
FaeI CATG 5 cut(s) 1309, 1542, 1745, 1924, 2163
FalI AAGNNNNNCTT 6 cut(s) 566, 598, 1124, 1156, 1446, 1478
FaqI GGGAC 2 cut(s) 356, 757
FatI CATG 5 cut(s) 1305, 1538, 1741, 1920, 2159
FauNDI CATATG 1 cut(s) 53
FbaI TGATCA 1 cut(s) 457
FblI GTMKAC 4 cut(s) 357, 1241, 1296, 1637
Fnu4HI GCNGC 5 cut(s) 58, 69, 72, 648, 1035
FokI GGATG 7 cut(s) 110, 232, 282, 286, 453, 1892, 2216
FriOI GRGCYC 3 cut(s) 1049, 1582, 1839
Fsp4HI GCNGC 5 cut(s) 58, 69, 72, 648, 1035
FspBI CTAG 4 cut(s) 17, 201, 510, 2072
GlaI GCGC 4 cut(s) 61, 695, 1550, 2042
GluI GCNGC 5 cut(s) 58, 69, 72, 648, 1035
HaeII RGCGCY 1 cut(s) 2044
HaeIII GGCC 3 cut(s) 642, 930, 1275
HhaI GCGC 4 cut(s) 62, 696, 1551, 2043
Hin1II CATG 5 cut(s) 1309, 1542, 1745, 1924, 2163
Hin6I GCGC 4 cut(s) 60, 694, 1549, 2041
HinP1I GCGC 4 cut(s) 60, 694, 1549, 2041
HincII GTYRAC 2 cut(s) 784, 1638
HindII GTYRAC 2 cut(s) 784, 1638
HinfI GANTC 5 cut(s) 197, 464, 1059, 2080, 2147
HphI GGTGA 3 cut(s) 292, 1199, 1712
Hpy166II GTNNAC 7 cut(s) 283, 358, 784, 946, 1242, 1297, 1638
Hpy188I TCNGA 7 cut(s) 469, 507, 826, 1372, 1876, 2141, 2203
Hpy8I GTNNAC 7 cut(s) 283, 358, 784, 946, 1242, 1297, 1638
Hpy99I CGWCG 2 cut(s) 749, 1010
HpyAV CCTTC 6 cut(s) 592, 851, 1880, 1960, 1964, 2028
HpyCH4III ACNGT 3 cut(s) 500, 749, 1294
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 1676, 2006
HpyF3I CTNAG 7 cut(s) 527, 686, 711, 1651, 1759, 1875, 2067
Hsp92II CATG 5 cut(s) 1309, 1542, 1745, 1924, 2163
HspAI GCGC 4 cut(s) 60, 694, 1549, 2041
KpnI GGTACC 1 cut(s) 1494
Ksp22I TGATCA 1 cut(s) 457
Kzo9I GATC 8 cut(s) 30, 457, 1026, 1119, 1697, 1930, 1973, 2192
LmnI GCTCC 1 cut(s) 1577
Lsp1109I GCAGC 3 cut(s) 55, 58, 659
LweI GCATC 6 cut(s) 210, 264, 431, 911, 1942, 2006
MaeI CTAG 4 cut(s) 17, 201, 510, 2072
MaeIII GTNAC 7 cut(s) 118, 161, 292, 679, 836, 1754, 2059
MalI GATC 8 cut(s) 32, 459, 1028, 1121, 1699, 1932, 1975, 2194
MboI GATC 8 cut(s) 30, 457, 1026, 1119, 1697, 1930, 1973, 2192
MboII GAAGA 9 cut(s) 25, 292, 670, 1117, 1132, 1348, 1535, 2025, 2135
MfeI CAATTG 1 cut(s) 1701
MhlI GDGCHC 3 cut(s) 1049, 1582, 1839
MlsI TGGCCA 1 cut(s) 1275
MluNI TGGCCA 1 cut(s) 1275
MlyI GAGTC 1 cut(s) 1053
MmeI TCCRAC 1 cut(s) 1290
Mox20I TGGCCA 1 cut(s) 1275
Mph1103I ATGCAT 1 cut(s) 926
MroXI GAANNNNTTC 4 cut(s) 177, 1527, 1773, 2079
MscI TGGCCA 1 cut(s) 1275
MslI CAYNNNNRTG 5 cut(s) 386, 688, 1416, 1537, 1994
Msp20I TGGCCA 1 cut(s) 1275
MspA1I CMGCKG 1 cut(s) 2066
MspR9I CCNGG 1 cut(s) 908
MunI CAATTG 1 cut(s) 1701
Mva1269I GAATGC 1 cut(s) 908
MvaI CCWGG 1 cut(s) 908
MvnI CGCG 1 cut(s) 60
MwoI GCNNNNNNNGC 3 cut(s) 68, 1676, 2006
NcoI CCATGG 1 cut(s) 2159
NdeI CATATG 1 cut(s) 53
NdeII GATC 8 cut(s) 30, 457, 1026, 1119, 1697, 1930, 1973, 2192
NlaIII CATG 5 cut(s) 1309, 1542, 1745, 1924, 2163
NlaIV GGNNCC 3 cut(s) 675, 912, 1492
NmuCI GTSAC 2 cut(s) 679, 2059
NsiI ATGCAT 1 cut(s) 926
NspI RCATGY 1 cut(s) 1309
NspV TTCGAA 1 cut(s) 855
OliI CACNNNNGTG 1 cut(s) 386
PaeR7I CTCGAG 1 cut(s) 1048
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PctI GAATGC 1 cut(s) 908
PdmI GAANNNNTTC 4 cut(s) 177, 1527, 1773, 2079
PfeI GAWTC 4 cut(s) 197, 464, 2080, 2147
PkrI GCNGC 5 cut(s) 59, 70, 73, 649, 1036
PleI GAGTC 1 cut(s) 1053
PpsI GAGTC 1 cut(s) 1053
PshBI ATTAAT 1 cut(s) 831
Psp124BI GAGCTC 3 cut(s) 1049, 1582, 1839
Psp6I CCWGG 1 cut(s) 906
PspGI CCWGG 1 cut(s) 906
PspN4I GGNNCC 3 cut(s) 675, 912, 1492
PspPI GGNCC 2 cut(s) 146, 640
PspXI VCTCGAGB 1 cut(s) 1048
PstI CTGCAG 1 cut(s) 388
PvuII CAGCTG 1 cut(s) 2066
RsaI GTAC 5 cut(s) 962, 1291, 1492, 1589, 1740
RsaNI GTAC 5 cut(s) 961, 1290, 1491, 1588, 1739
RseI CAYNNNNRTG 5 cut(s) 386, 688, 1416, 1537, 1994
SacI GAGCTC 3 cut(s) 1049, 1582, 1839
SalI GTCGAC 1 cut(s) 1636
SatI GCNGC 5 cut(s) 58, 69, 72, 648, 1035
Sau3AI GATC 8 cut(s) 30, 457, 1026, 1119, 1697, 1930, 1973, 2192
Sau96I GGNCC 2 cut(s) 146, 640
SchI GAGTC 1 cut(s) 1053
ScrFI CCNGG 1 cut(s) 908
SduI GDGCHC 3 cut(s) 1049, 1582, 1839
SfaNI GCATC 6 cut(s) 210, 264, 431, 911, 1942, 2006
SfcI CTRYAG 1 cut(s) 384
Sfr274I CTCGAG 1 cut(s) 1048
SfuI TTCGAA 1 cut(s) 855
SinI GGWCC 1 cut(s) 146
SlaI CTCGAG 1 cut(s) 1048
SmiMI CAYNNNNRTG 5 cut(s) 386, 688, 1416, 1537, 1994
SmlI CTYRAG 4 cut(s) 229, 757, 1048, 1956
SmoI CTYRAG 4 cut(s) 229, 757, 1048, 1956
SpeI ACTAGT 1 cut(s) 509
SsiI CCGC 6 cut(s) 58, 332, 420, 438, 616, 1035
SspMI CTAG 4 cut(s) 17, 201, 510, 2072
SstI GAGCTC 3 cut(s) 1049, 1582, 1839
StyD4I CCNGG 1 cut(s) 906
StyI CCWWGG 3 cut(s) 1054, 1276, 2159
TaaI ACNGT 3 cut(s) 500, 749, 1294
TaqI TCGA 9 cut(s) 186, 364, 855, 1049, 1200, 1637, 1694, 1976, 2154
TaqII GACCGA 2 cut(s) 810, 933
TatI WGTACW 1 cut(s) 1738
TauI GCSGC 2 cut(s) 60, 1037
TfiI GAWTC 4 cut(s) 197, 464, 2080, 2147
TscAI CASTG 4 cut(s) 388, 393, 456, 535
TseFI GTSAC 2 cut(s) 679, 2059
TseI GCWGC 3 cut(s) 68, 71, 647
Tsp45I GTSAC 2 cut(s) 679, 2059
TspGWI ACGGA 1 cut(s) 855
TspRI CASTG 4 cut(s) 388, 393, 456, 535
VpaK11BI GGWCC 1 cut(s) 146
VspI ATTAAT 1 cut(s) 831
XapI RAATTY 7 cut(s) 752, 880, 1266, 1373, 1475, 2023, 2132
XceI RCATGY 1 cut(s) 1309
XhoI CTCGAG 1 cut(s) 1048
XmiI GTMKAC 4 cut(s) 357, 1241, 1296, 1637
XmnI GAANNNNTTC 4 cut(s) 177, 1527, 1773, 2079
XspI CTAG 4 cut(s) 17, 201, 510, 2072
Zsp2I ATGCAT 1 cut(s) 926
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.