FvH4_6g39020

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
30843950 .. 30848394
4445 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39020.t3

Sequence Viewer

Length: 2223 bp
ATGGATGTTGTGCAGTTTTTACTTCATATTACTCTGTTCTTGTGGTGTATTATTACTGCTATAGAAGCACAACAACCCTTAATAGCAAAGCCTAATTGTCCATCACAGTGTGGAAACGTTTTAATCCCTTATCCTTTTGGAATTGGAGAAGGTTGTTATGTAGACAACTGGTTCAAAATACTTTGTAATCAATCAACTAGCCCACCCAAACCTTACTTGAACTACACCAGTCTGCATCTTGAGGTATTGGAAATTTCTGTTGCAGGAACTCTAAAAGTCAGACACCCGATAACGGTCTCTGATAATTGCAGTGACAAGCCAATTCGGCAAGCAGCCTACTTGTCGCAAAGCCCTTTTGTGTTCTCACAAAAGAACAGATTTACAGTAGTTGGTTGTGGTGTTGTGGCTAGGCTGAATTCTAGCTCAGATGGCTTGATCATCTCGGCTACATGCTCGTCCCAGTGTGGATTTGCCTCCAATGCAACCATCAGCAGCAGTACCTGCAATGGTTCGGATTGCAGCCAGACCTCTGTCCCTTCCTTTCTCTCTACCTTCGACACCAGTTTCGTGTCTACAACAAATCCATGCAATTATGCATTCTTGGCAGACCAGGAATGGTTTCAGTCATTTGCTGACAATTCAAATAATATATCTGCTAGAATAAGTGATATGGATGATGTGCCTGCCATGTTAGACTGGAGCTTATATCATTCGATCCCTGATGTATTTGGAACCTCCTCAATTGCTTCTGATAGATTTGTTAATTGCCGGGAATACAGTGACTACTACTCTCCAACATTTAATTCCTCAAGGCTGGAATGTTTCTGTGCAACTGGCTTTGAAGGAAACCCCTATCTCCTTCATGGATGTCAAGACATAAATGAATGCTTGGCTTCAAACCGGCAGTGTCCCGTGACCTATGCATGCAAGAATCATCCTGGTTACGCAGAATGTTACTCTCCGAAGAGAAAGTCCCCAGTTAAACTGGCTTTTATAGTTATCGGCAGCGTTCTTGGACTACTGTTTCTACTCGGTGTTGCTTGGTGGTTGCACAAAGCCATCAAGAAAAGGAAGAACATAAAGCAAAAGGAGAAGTTTTTTCAACAAAATGGTGGTTTATTGTTGGAGCAACAACTGTTATCTGGTGAAGTAAATGTCGAAAAAATTAAGTTGTTCAATGCGAAGGAGTTGGAGAAAGCTACTGACCGCTTTAATGTGGACAGAATTCTTGGCCAAGGAGGCCAAGGTACTGTTTACAAAGGAATGCTGGACGACGGAAGAATCGTTGCTGTGAAACAGTCTACAAAACTTGAAGGAGGTGAAGTAGGAAACTTCATTAATGAAATTGTCATTCTTTCACAGATTAACCATAGGAATGTGGTTAAGTTATTGGGGTGCTGTTTAGAGACGGAAGTTCCTCTTTTGGTTTATGAATTCATACTTAATGGAACACTTTCTGAGTATATTCATCACCACAATGAAGAGTTTCCTCTCACTTGGGAAATGCGCCTACGAGTGTCGATGGAAATTGCAGGAGCTATTTCATACTTACATTCATCTGCCTCCATGCCTATATACCACAGAGACATCAAGTCTTCTAACATATTGTTGGATAATAAGTATAGAGCCAAAGTAGCAGACTTTGGAACATCAAGATCTATTGCCATAGATAAGACACACCTTACGACACGAGTACAAGGAACATTTGGTTATTTAGACCCAGAATATTTCCAATCCAGTCAATTTACCGACAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTGCTGAGCTCTTGACAGGACAAAAGCCAATTTCTCCAACATCTTCAGAAGAATGGAGAAGCCTAGCAAATCATTTCATTCTTTCAATGGAAGGAAATTGCCTGTTCGATATTCTCGATAGTCGAGTTAGAAGGGATGGTCGGGAAGAAGAAATTGTGGCAGTTGCTAACCTTGCAAAAAGATGCTTAAATTTGAATGGGAGAAAACGACCTACTATGAAAGAAGTTGCGGTGGAGTTGGAGGGAATCCAATTGTCGGTTAAAGCTCATTCTGATGTTCAACAAAACTTCTCAGAGATTGCATATGGTCGAACGAATGGAATGACCAAGGCTTGGGATGCTTGTTCTTCATCAACAGTGTCATCATATATGGATAGTGGTACTGGTACAGGTTCTTCAATATTAGATGCACAACCTTTATTGTCCTTCAAGTATGAGTGA

Protein Analysis

741

Amino Acids

82.23

Weight (kDa)

6.1

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 92 7.2e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 404 - 670 5.3e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 406 - 673 2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 509
AccB7I CCANNNNNTGG 1 cut(s) 2115
AccI GTMKAC 3 cut(s) 162, 572, 1301
AciI CCGC 2 cut(s) 1207, 2012
AclI AACGTT 1 cut(s) 117
AclWI GGATC 1 cut(s) 709
AcoI YGGCCR 1 cut(s) 1231
AcsI RAATTY 5 cut(s) 252, 415, 1224, 1433, 1972
AcuI CTGAAG 1 cut(s) 1812
AdeI CACNNNGTG 1 cut(s) 110
AfaI GTAC 5 cut(s) 499, 1249, 1695, 2164, 2170
AfiI CCNNNNNNNGG 3 cut(s) 292, 2038, 2115
AhdI GACNNNNNGTC 1 cut(s) 1591
AjnI CCWGG 2 cut(s) 609, 937
AjuI GAANNNNNNNTTGG 2 cut(s) 787, 819
AluBI AGCT 7 cut(s) 423, 702, 1199, 1538, 1770, 1792, 2048
AluI AGCT 7 cut(s) 423, 702, 1199, 1538, 1770, 1792, 2048
Alw21I GWGCWC 1 cut(s) 1794
Alw26I GTCTC 3 cut(s) 301, 1400, 1578
AlwI GGATC 1 cut(s) 709
AlwNI CAGNNNCTG 1 cut(s) 501
AoxI GGCC 2 cut(s) 1231, 1240
ApeKI GCWGC 4 cut(s) 332, 492, 519, 1005
ApoI RAATTY 5 cut(s) 252, 415, 1224, 1433, 1972
ArsI GACNNNNNNTTYG 4 cut(s) 548, 580, 956, 988
AseI ATTAAT 1 cut(s) 1338
Asp700I GAANNNNTTC 3 cut(s) 618, 1453, 1485
AspLEI GCGC 1 cut(s) 1509
AspS9I GGNCC 1 cut(s) 1780
AsuC2I CCSGG 1 cut(s) 770
AsuHPI GGTGA 3 cut(s) 1157, 1331, 1463
AvaII GGWCC 1 cut(s) 1780
BalI TGGCCA 1 cut(s) 1233
BanII GRGCYC 1 cut(s) 1794
BarI GAAGNNNNNNTAC 2 cut(s) 2161, 2193
BauI CACGAG 1 cut(s) 1689
BbsI GAAGAC 1 cut(s) 1587
Bbv12I GWGCWC 1 cut(s) 1794
BbvI GCAGC 4 cut(s) 344, 504, 531, 1017
BccI CCATC 6 cut(s) 109, 422, 494, 1067, 1516, 1913
BciT130I CCWGG 2 cut(s) 611, 939
BclI TGATCA 1 cut(s) 435
BcnI CCSGG 1 cut(s) 770
BcoDI GTCTC 3 cut(s) 301, 1400, 1578
BfaI CTAG 5 cut(s) 198, 408, 420, 657, 1847
BfmI CTRYAG 1 cut(s) 60
BfuAI ACCTGC 1 cut(s) 509
BglI GCCNNNNNGGC 2 cut(s) 325, 1239
BglII AGATCT 1 cut(s) 1655
BisI GCNGC 4 cut(s) 333, 493, 520, 1006
BlpI GCTNAGC 1 cut(s) 1788
BlsI GCNGC 4 cut(s) 334, 494, 521, 1007
Bme1390I CCNGG 3 cut(s) 611, 770, 939
Bme18I GGWCC 1 cut(s) 1780
BmeRI GACNNNNNGTC 1 cut(s) 1591
BmgT120I GGNCC 1 cut(s) 1780
BmiI GGNNCC 1 cut(s) 733
BmrFI CCNGG 3 cut(s) 611, 770, 939
BmrI ACTGGG 2 cut(s) 454, 971
BmsI GCATC 4 cut(s) 244, 1955, 2110, 2179
BmuI ACTGGG 2 cut(s) 454, 971
BoxI GACNNNNGTC 1 cut(s) 530
BpiI GAAGAC 1 cut(s) 1587
BpmI CTGGAG 1 cut(s) 718
Bpu1102I GCTNAGC 1 cut(s) 1788
BpuEI CTTGAG 2 cut(s) 260, 793
BpuMI CCSGG 1 cut(s) 770
BsaI GGTCTC 1 cut(s) 301
BsaJI CCNNGG 3 cut(s) 1234, 1243, 2109
BsaXI ACNNNNNCTCC 2 cut(s) 1308, 1338
Bsc4I CCNNNNNNNGG 3 cut(s) 292, 2038, 2115
Bse118I RCCGGY 1 cut(s) 900
Bse3DI GCAATG 1 cut(s) 511
BseBI CCWGG 2 cut(s) 611, 939
BseDI CCNNGG 3 cut(s) 1234, 1243, 2109
BseGI GGATG 6 cut(s) 10, 679, 872, 934, 1924, 2125
BseLI CCNNNNNNNGG 3 cut(s) 292, 2038, 2115
BseMI GCAATG 1 cut(s) 511
BseMII CTCAG 4 cut(s) 438, 1449, 1779, 2088
BseRI GAGGAG 1 cut(s) 727
BseXI GCAGC 4 cut(s) 344, 504, 531, 1017
BsgI GTGCAG 1 cut(s) 32
BshFI GGCC 2 cut(s) 1233, 1242
BsiHKAI GWGCWC 1 cut(s) 1794
BsiSI CCGG 2 cut(s) 769, 901
BslFI GGGAC 4 cut(s) 442, 518, 894, 958
BslI CCNNNNNNNGG 3 cut(s) 292, 2038, 2115
BsmAI GTCTC 3 cut(s) 301, 1400, 1578
BsmBI CGTCTC 1 cut(s) 1400
BsmFI GGGAC 4 cut(s) 442, 518, 894, 958
BsmI GAATGC 3 cut(s) 596, 890, 1269
BsnI GGCC 2 cut(s) 1233, 1242
Bso31I GGTCTC 1 cut(s) 301
Bsp1286I GDGCHC 1 cut(s) 1794
Bsp143I GATC 3 cut(s) 435, 714, 1655
Bsp1720I GCTNAGC 1 cut(s) 1788
BspACI CCGC 2 cut(s) 1207, 2012
BspANI GGCC 2 cut(s) 1233, 1242
BspCNI CTCAG 4 cut(s) 437, 1450, 1780, 2087
BspLI GGNNCC 1 cut(s) 733
BspMI ACCTGC 1 cut(s) 509
BspPI GGATC 1 cut(s) 709
BspTNI GGTCTC 1 cut(s) 301
BsrDI GCAATG 1 cut(s) 511
BsrFI RCCGGY 1 cut(s) 900
BssAI RCCGGY 1 cut(s) 900
BssECI CCNNGG 3 cut(s) 1234, 1243, 2109
BssMI GATC 3 cut(s) 435, 714, 1655
BssSI CACGAG 1 cut(s) 1689
BssT1I CCWWGG 3 cut(s) 1234, 1243, 2109
Bst2BI CACGAG 1 cut(s) 1689
Bst2UI CCWGG 2 cut(s) 611, 939
Bst4CI ACNGT 9 cut(s) 108, 295, 385, 779, 1023, 1137, 1252, 1299, 2140
Bst6I CTCTTC 2 cut(s) 959, 1476
BstAPI GCANNNNNTGC 1 cut(s) 501
BstC8I GCNNGC 3 cut(s) 330, 684, 925
BstDEI CTNAG 4 cut(s) 424, 1458, 1788, 2074
BstF5I GGATG 6 cut(s) 10, 679, 872, 934, 1924, 2125
BstHHI GCGC 1 cut(s) 1509
BstKTI GATC 3 cut(s) 438, 717, 1658
BstMAI GTCTC 3 cut(s) 301, 1400, 1578
BstMBI GATC 3 cut(s) 435, 714, 1655
BstNI CCWGG 2 cut(s) 611, 939
BstNSI RCATGY 2 cut(s) 453, 927
BstPAI GACNNNNGTC 1 cut(s) 530
BstSCI CCNGG 3 cut(s) 609, 768, 937
BstSFI CTRYAG 1 cut(s) 60
BstV1I GCAGC 4 cut(s) 344, 504, 531, 1017
BstV2I GAAGAC 1 cut(s) 1587
BstX2I RGATCY 1 cut(s) 1655
BstYI RGATCY 1 cut(s) 1655
BsuRI GGCC 2 cut(s) 1233, 1242
BtsCI GGATG 6 cut(s) 10, 679, 872, 934, 1924, 2125
BtsI GCAGTG 2 cut(s) 316, 911
BtsIMutI CAGTG 6 cut(s) 113, 316, 467, 784, 911, 2145
BveI ACCTGC 1 cut(s) 509
Cac8I GCNNGC 3 cut(s) 330, 684, 925
CaiI CAGNNNCTG 1 cut(s) 501
CfoI GCGC 1 cut(s) 1509
Cfr10I RCCGGY 1 cut(s) 900
Cfr13I GGNCC 1 cut(s) 1780
Csp6I GTAC 5 cut(s) 498, 1248, 1694, 2163, 2169
CviAII CATG 6 cut(s) 450, 585, 688, 863, 924, 1567
CviQI GTAC 5 cut(s) 498, 1248, 1694, 2163, 2169
DdeI CTNAG 4 cut(s) 424, 1458, 1788, 2074
DpnI GATC 3 cut(s) 437, 716, 1657
DpnII GATC 3 cut(s) 435, 714, 1655
DraIII CACNNNGTG 1 cut(s) 110
DriI GACNNNNNGTC 1 cut(s) 1591
EaeI YGGCCR 1 cut(s) 1231
Eam1104I CTCTTC 2 cut(s) 959, 1476
Eam1105I GACNNNNNGTC 1 cut(s) 1591
EarI CTCTTC 2 cut(s) 959, 1476
Ecl136II GAGCTC 1 cut(s) 1792
Eco130I CCWWGG 3 cut(s) 1234, 1243, 2109
Eco24I GRGCYC 1 cut(s) 1794
Eco31I GGTCTC 1 cut(s) 301
Eco47I GGWCC 1 cut(s) 1780
Eco53kI GAGCTC 1 cut(s) 1792
Eco57I CTGAAG 1 cut(s) 1812
EcoICRI GAGCTC 1 cut(s) 1792
EcoRI GAATTC 3 cut(s) 415, 1224, 1433
EcoRII CCWGG 2 cut(s) 609, 937
EcoT14I CCWWGG 3 cut(s) 1234, 1243, 2109
EcoT22I ATGCAT 2 cut(s) 598, 925
EcoT38I GRGCYC 1 cut(s) 1794
ErhI CCWWGG 3 cut(s) 1234, 1243, 2109
Esp3I CGTCTC 1 cut(s) 1400
FaeI CATG 6 cut(s) 453, 588, 691, 866, 927, 1570
FalI AAGNNNNNCTT 2 cut(s) 1404, 1436
FaqI GGGAC 4 cut(s) 442, 518, 894, 958
FatI CATG 6 cut(s) 449, 584, 687, 862, 923, 1566
FauNDI CATATG 1 cut(s) 2086
FbaI TGATCA 1 cut(s) 435
FblI GTMKAC 3 cut(s) 162, 572, 1301
Fnu4HI GCNGC 4 cut(s) 333, 493, 520, 1006
FokI GGATG 6 cut(s) 17, 686, 879, 921, 1931, 2132
FriOI GRGCYC 1 cut(s) 1794
Fsp4HI GCNGC 4 cut(s) 333, 493, 520, 1006
FspBI CTAG 5 cut(s) 198, 408, 420, 657, 1847
GlaI GCGC 1 cut(s) 1508
GluI GCNGC 4 cut(s) 333, 493, 520, 1006
GsuI CTGGAG 1 cut(s) 718
HaeIII GGCC 2 cut(s) 1233, 1242
HapII CCGG 2 cut(s) 769, 901
HhaI GCGC 1 cut(s) 1509
Hin1II CATG 6 cut(s) 453, 588, 691, 866, 927, 1570
Hin6I GCGC 1 cut(s) 1507
HinP1I GCGC 1 cut(s) 1507
HinfI GANTC 3 cut(s) 931, 1281, 2028
HpaII CCGG 2 cut(s) 769, 901
HphI GGTGA 3 cut(s) 1157, 1331, 1463
Hpy166II GTNNAC 5 cut(s) 163, 573, 1219, 1255, 1302
Hpy188III TCNNGA 7 cut(s) 239, 872, 1063, 1653, 1795, 1898, 1925
Hpy8I GTNNAC 5 cut(s) 163, 573, 1219, 1255, 1302
Hpy99I CGWCG 1 cut(s) 1277
HpyCH4III ACNGT 9 cut(s) 108, 295, 385, 779, 1023, 1137, 1252, 1299, 2140
HpyCH4IV ACGT 1 cut(s) 117
HpyF3I CTNAG 4 cut(s) 424, 1458, 1788, 2074
HpySE526I ACGT 1 cut(s) 117
Hsp92II CATG 6 cut(s) 453, 588, 691, 866, 927, 1570
HspAI GCGC 1 cut(s) 1507
Ksp22I TGATCA 1 cut(s) 435
Kzo9I GATC 3 cut(s) 435, 714, 1655
LmnI GCTCC 3 cut(s) 699, 1126, 1535
Lsp1109I GCAGC 4 cut(s) 344, 504, 531, 1017
LweI GCATC 4 cut(s) 244, 1955, 2110, 2179
MaeI CTAG 5 cut(s) 198, 408, 420, 657, 1847
MaeII ACGT 1 cut(s) 117
MaeIII GTNAC 5 cut(s) 311, 779, 913, 941, 953
MalI GATC 3 cut(s) 437, 716, 1657
MboI GATC 3 cut(s) 435, 714, 1655
MfeI CAATTG 2 cut(s) 741, 2033
MflI RGATCY 1 cut(s) 1655
MhlI GDGCHC 1 cut(s) 1794
MlsI TGGCCA 1 cut(s) 1233
MluNI TGGCCA 1 cut(s) 1233
MmeI TCCRAC 6 cut(s) 818, 1104, 1170, 1590, 1844, 2001
Mox20I TGGCCA 1 cut(s) 1233
Mph1103I ATGCAT 2 cut(s) 598, 925
MroXI GAANNNNTTC 3 cut(s) 618, 1453, 1485
MscI TGGCCA 1 cut(s) 1233
MslI CAYNNNNRTG 4 cut(s) 106, 1374, 1476, 2055
Msp20I TGGCCA 1 cut(s) 1233
MspI CCGG 2 cut(s) 769, 901
MspR9I CCNGG 3 cut(s) 611, 770, 939
MunI CAATTG 2 cut(s) 741, 2033
Mva1269I GAATGC 3 cut(s) 596, 890, 1269
MvaI CCWGG 2 cut(s) 611, 939
NciI CCSGG 1 cut(s) 770
NdeI CATATG 1 cut(s) 2086
NdeII GATC 3 cut(s) 435, 714, 1655
NlaIII CATG 6 cut(s) 453, 588, 691, 866, 927, 1570
NlaIV GGNNCC 1 cut(s) 733
NmeAIII GCCGAG 1 cut(s) 422
NmuCI GTSAC 3 cut(s) 311, 779, 913
NsiI ATGCAT 2 cut(s) 598, 925
NspI RCATGY 2 cut(s) 453, 927
PaeI GCATGC 1 cut(s) 927
PcsI WCGNNNNNNNCGW 2 cut(s) 1281, 1896
PctI GAATGC 3 cut(s) 596, 890, 1269
PdmI GAANNNNTTC 3 cut(s) 618, 1453, 1485
PfeI GAWTC 3 cut(s) 931, 1281, 2028
PflMI CCANNNNNTGG 1 cut(s) 2115
PkrI GCNGC 4 cut(s) 334, 494, 521, 1007
PshAI GACNNNNGTC 1 cut(s) 530
PshBI ATTAAT 1 cut(s) 1338
Psp124BI GAGCTC 1 cut(s) 1794
Psp1406I AACGTT 1 cut(s) 117
Psp6I CCWGG 2 cut(s) 609, 937
PspGI CCWGG 2 cut(s) 609, 937
PspN4I GGNNCC 1 cut(s) 733
PspPI GGNCC 1 cut(s) 1780
PstNI CAGNNNCTG 1 cut(s) 501
PsuI RGATCY 1 cut(s) 1655
RsaI GTAC 5 cut(s) 499, 1249, 1695, 2164, 2170
RsaNI GTAC 5 cut(s) 498, 1248, 1694, 2163, 2169
RseI CAYNNNNRTG 4 cut(s) 106, 1374, 1476, 2055
SacI GAGCTC 1 cut(s) 1794
SatI GCNGC 4 cut(s) 333, 493, 520, 1006
Sau3AI GATC 3 cut(s) 435, 714, 1655
Sau96I GGNCC 1 cut(s) 1780
ScrFI CCNGG 3 cut(s) 611, 770, 939
SduI GDGCHC 1 cut(s) 1794
SfaNI GCATC 4 cut(s) 244, 1955, 2110, 2179
SfcI CTRYAG 1 cut(s) 60
SfiI GGCCNNNNNGGCC 1 cut(s) 1239
SinI GGWCC 1 cut(s) 1780
SmiMI CAYNNNNRTG 4 cut(s) 106, 1374, 1476, 2055
SmlI CTYRAG 2 cut(s) 239, 808
SmoI CTYRAG 2 cut(s) 239, 808
SphI GCATGC 1 cut(s) 927
SsiI CCGC 2 cut(s) 1207, 2012
SspI AATATT 2 cut(s) 1727, 2184
SspMI CTAG 5 cut(s) 198, 408, 420, 657, 1847
SstI GAGCTC 1 cut(s) 1794
StyD4I CCNGG 3 cut(s) 609, 768, 937
StyI CCWWGG 3 cut(s) 1234, 1243, 2109
TaaI ACNGT 9 cut(s) 108, 295, 385, 779, 1023, 1137, 1252, 1299, 2140
TaiI ACGT 1 cut(s) 120
TaqI TCGA 8 cut(s) 555, 713, 1158, 1520, 1890, 1899, 1906, 2092
TatI WGTACW 1 cut(s) 1693
TfiI GAWTC 3 cut(s) 931, 1281, 2028
TscAI CASTG 6 cut(s) 113, 316, 467, 784, 911, 2145
TseFI GTSAC 3 cut(s) 311, 779, 913
TseI GCWGC 4 cut(s) 332, 492, 519, 1005
Tsp45I GTSAC 3 cut(s) 311, 779, 913
TspGWI ACGGA 2 cut(s) 1290, 1424
TspRI CASTG 6 cut(s) 113, 316, 467, 784, 911, 2145
Van91I CCANNNNNTGG 1 cut(s) 2115
VpaK11BI GGWCC 1 cut(s) 1780
VspI ATTAAT 1 cut(s) 1338
XapI RAATTY 5 cut(s) 252, 415, 1224, 1433, 1972
XceI RCATGY 2 cut(s) 453, 927
XmiI GTMKAC 3 cut(s) 162, 572, 1301
XmnI GAANNNNTTC 3 cut(s) 618, 1453, 1485
XspI CTAG 5 cut(s) 198, 408, 420, 657, 1847
Zsp2I ATGCAT 2 cut(s) 598, 925
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.