RLG00000020649

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
67117144 .. 67119681
2538 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020649

Sequence Viewer

Length: 2100 bp
ATGGTACCTGTTCTGTTTTTACTTCATGTGATCACTCTGTTCTTGTGGTCTATGAGTACTATTGCGGCGCAGCCGGTAGCATCAGAAGCCGTACCTATAGCAAAGCCTAATTGTACATCATATTGCGGAGACGTTCAAATCCCATATCCTTTTGGAATTGAAGCAGGTTGTTACATAGACGACTGGTTCAAAATTTTCTGTTACAAACCCACCGGCAAGTCCGCCGGCCAACCCACAGCTTACTTGAACCCCGCCTATCTGAACCTTGTGGTCTTCAATATTTCTCTTGAAGCAGGAACAATACAGGTAACAACTAACTTCACCTTTTCTAGTCTTGGCTGCGTTGATCAGCGAACTGCCGTCCTACCAGCCAACTTGAGCGGAAGCCCGTTCCTCTACTCCGAGAAAAACAAATTCACTGTAATTGGATGCGGTGGAATCACCTGGATGATGCTCTCCACCGGTTCAAAAGTTGGTGGCTGCCTGGCCACTTGTGACGGCAGTGATCCTGCACAACGTGAATTTCTTGATGGCTGCACAGGTATCAACTCATGCTGCCAGACCAACATTCCTCCGAATCTTACTGCTTTCAACTACAGCTATGAAGCAATAAATACAACTTACCCTGGAAATGACTCTTGCACTAAGGCATTTTTGGTAAACCCGGATTGGGTTGGGTACTCAAGCGGAGGAATGGTATCCATAAAGCAACTTGCCATCCCTATGTTGCTCGATTGGAGATTAAGTAATTACTCAACTCTTCAAATTCGTGGAACAGCTGATTGGGCCGATAACACGGGCACGACATGCACAAATGCTAGTTTGTGTTCCTGTTCCTGCTCATCCGGGTTTCAGGGAAACCCCTACCTTCCCAACGGATGTCAAGATATCAATGAATGTGAAGATTCAGACCCATGTCCTGGTGCCAGCATTTGTATCAACGATCGTGGTTCGTTTAGGTGCCAATCTCCGGATCAAACGGTTAAACTGGCAATTATTGTTGTCGGCAGTGTTCTTGGAGCATTGCTCATACTCATTTGTGCATGGGGGTTACACAATGTCATAAAGAAAAGACAAAACACTAAACGCAAGGAGAAGTTTTTTAAGCAGAATGGTGGTTTGCTGCTGGAGAAACAATCTTCTGGTGACGTTAATGTTGAGAAAATTAAATTGTTCAATTCCGAGGAGTTGGAGAAAGCCACAGATAATTATAATGCAAACAGAATTCTAGGTCAAGGAGGCCATGGAACTGTTTACAAAGGCATGCTCGCAGATGGAAGTATTGTGGCGATAAAGAAGTCTAAAATAGTTGATGAAGGAGAAGTTGAACAATTCATTAATGAAATTGTTATTCTTTCACAAATAATTCATAGGAATGTGGTTAAATTAATGGGTTGTTGTTTAGAGACCGAAGTTCCCGTTCTAGTTTATGAATTCATACCAAATGGAACTCTTTCTCAGTATATTCATCACCAGAATGAGGAGTTTCCTCTTACATGGAGAGTGCGGTTGCGAGTTTCTATTGAAGTGGCAGGAGCTCTTTCCTACTTACACTCAGCAACTTCCTTTCCCATTTACCATCGAGATATCAAGACCTCCAACATACTCTTGGATGATAAATTTAGAGCTAAAGTTGCAGACTTTGGAACTTCCAGAACAGTTGCCATCGACAAAACACATCTTACCATGTCACAAGTTCAAGGAACATTTGGTTATTTAGACCCAGAGTACTTCCAGTCTAGTCAATTTACAGATAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTGTTGAACTTCTAACTGGGCTAAAGCCAGTTTCTCAGACGAGGCCAGAAGAGTGGAGAAGCCTGACAAATTATTTCCTTCTTTCAATGGAGGAGAATCGTCTGCTTGACATTCTTGATGCTCGAGTTATGAATGAAGGTGGCAAGGAAGAAATTATGGCAGTTGCACAGCTTGCAAGGCGTTGCTTGAATATGAAGGGAAAGAAGCGTCCCACTATGAAAGAAGTTGCAGTTCAATTGGAGGGAATATTTCAATTATCAGCAAAAGATTCTGACGTTCATACAAATTCAGCAGATAGGTTGAATATGTCTTAA

Protein Analysis

700

Amino Acids

76.94

Weight (kDa)

5.8

Isoelectric Point (pI)

34.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 38 - 104 9.5e-09 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 404 - 671 2.3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 407 - 675 3.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1212
Acc36I ACCTGC 1 cut(s) 155
Acc65I GGTACC 1 cut(s) 4
AccB1I GGYRCC 3 cut(s) 4, 923, 960
AccB7I CCANNNNNTGG 1 cut(s) 920
AccBSI CCGCTC 1 cut(s) 381
AccIII TCCGGA 1 cut(s) 970
AciI CCGC 8 cut(s) 65, 126, 222, 252, 381, 432, 687, 1507
AclWI GGATC 2 cut(s) 500, 981
AcoI YGGCCR 2 cut(s) 226, 486
AcsI RAATTY 8 cut(s) 192, 413, 521, 765, 1224, 1433, 1619, 2071
AdeI CACNNNGTG 1 cut(s) 518
AfaI GTAC 6 cut(s) 6, 58, 93, 115, 680, 1730
AfiI CCNNNNNNNGG 4 cut(s) 670, 920, 970, 1480
AgeI ACCGGT 1 cut(s) 461
AjnI CCWGG 4 cut(s) 443, 483, 625, 919
AjuI GAANNNNNNNTTGG 2 cut(s) 766, 798
AluBI AGCT 7 cut(s) 239, 600, 779, 1538, 1628, 1773, 1957
AluI AGCT 7 cut(s) 239, 600, 779, 1538, 1628, 1773, 1957
Alw21I GWGCWC 1 cut(s) 1540
Alw26I GTCTC 2 cut(s) 123, 1400
AlwI GGATC 2 cut(s) 500, 981
Ama87I CYCGRG 1 cut(s) 1908
Aor13HI TCCGGA 1 cut(s) 970
AoxI GGCC 5 cut(s) 226, 486, 786, 1240, 1829
ApeKI GCWGC 6 cut(s) 70, 339, 480, 534, 555, 1123
ApoI RAATTY 8 cut(s) 192, 413, 521, 765, 1224, 1433, 1619, 2071
AseI ATTAAT 2 cut(s) 1338, 1388
AsiGI ACCGGT 1 cut(s) 461
Asp700I GAANNNNTTC 1 cut(s) 1453
Asp718I GGTACC 1 cut(s) 4
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 2 cut(s) 786, 1783
AsuC2I CCSGG 2 cut(s) 665, 847
AsuHPI GGTGA 4 cut(s) 313, 433, 1157, 1463
AvaI CYCGRG 1 cut(s) 1908
AvaII GGWCC 1 cut(s) 1783
BaeGI GKGCMC 1 cut(s) 803
BalI TGGCCA 1 cut(s) 488
BanI GGYRCC 3 cut(s) 4, 923, 960
BanII GRGCYC 1 cut(s) 1540
BbsI GAAGAC 1 cut(s) 265
Bbv12I GWGCWC 1 cut(s) 1540
BbvI GCAGC 6 cut(s) 82, 326, 467, 521, 542, 1110
BccI CCATC 5 cut(s) 524, 725, 1268, 1587, 1673
BceAI ACGGC 3 cut(s) 74, 344, 514
BciT130I CCWGG 4 cut(s) 445, 485, 627, 921
BciVI GTATCC 1 cut(s) 709
BclI TGATCA 2 cut(s) 30, 346
BcnI CCSGG 2 cut(s) 665, 847
BcoDI GTCTC 2 cut(s) 123, 1400
BfaI CTAG 5 cut(s) 330, 819, 1229, 1424, 1740
BfmI CTRYAG 2 cut(s) 96, 595
BfuAI ACCTGC 1 cut(s) 155
BfuI GTATCC 1 cut(s) 709
BisI GCNGC 7 cut(s) 66, 71, 340, 481, 535, 556, 1124
BlsI GCNGC 7 cut(s) 67, 72, 341, 482, 536, 557, 1125
BmcAI AGTACT 2 cut(s) 58, 1730
Bme1390I CCNGG 6 cut(s) 445, 485, 627, 665, 847, 921
Bme18I GGWCC 1 cut(s) 1783
BmeT110I CYCGRG 1 cut(s) 1908
BmgT120I GGNCC 2 cut(s) 786, 1783
BmiI GGNNCC 3 cut(s) 6, 925, 962
BmrFI CCNGG 6 cut(s) 445, 485, 627, 665, 847, 921
BmrI ACTGGG 1 cut(s) 1812
BmsI GCATC 4 cut(s) 89, 419, 441, 1894
BmuI ACTGGG 1 cut(s) 1812
BoxI GACNNNNGTC 1 cut(s) 915
BpiI GAAGAC 1 cut(s) 265
BplI GAGNNNNNCTC 2 cut(s) 1011, 1043
BpmI CTGGAG 1 cut(s) 1148
BpuEI CTTGAG 2 cut(s) 397, 667
BpuMI CCSGG 2 cut(s) 665, 847
BsaI GGTCTC 1 cut(s) 1400
BsaJI CCNNGG 3 cut(s) 625, 1182, 1243
BsaWI WCCGGW 2 cut(s) 461, 970
BsaXI ACNNNNNCTCC 4 cut(s) 681, 711, 730, 760
Bsc4I CCNNNNNNNGG 4 cut(s) 670, 920, 970, 1480
Bse118I RCCGGY 4 cut(s) 73, 212, 224, 461
Bse1I ACTGG 5 cut(s) 188, 993, 1735, 1807, 1814
Bse3DI GCAATG 1 cut(s) 1022
BseAI TCCGGA 1 cut(s) 970
BseBI CCWGG 4 cut(s) 445, 485, 627, 921
BseDI CCNNGG 3 cut(s) 625, 1182, 1243
BseGI GGATG 6 cut(s) 434, 453, 717, 842, 884, 1618
BseLI CCNNNNNNNGG 4 cut(s) 670, 920, 970, 1480
BseMI GCAATG 1 cut(s) 1022
BseMII CTCAG 3 cut(s) 1472, 1569, 1835
BseNI ACTGG 5 cut(s) 188, 993, 1735, 1807, 1814
BseRI GAGGAG 3 cut(s) 1199, 1496, 1892
BseSI GKGCMC 1 cut(s) 803
BseXI GCAGC 6 cut(s) 82, 326, 467, 521, 542, 1110
BsgI GTGCAG 2 cut(s) 495, 520
Bsh1285I CGRYCG 1 cut(s) 946
BshFI GGCC 5 cut(s) 228, 488, 788, 1242, 1831
BshNI GGYRCC 3 cut(s) 4, 923, 960
BshTI ACCGGT 1 cut(s) 461
BsiEI CGRYCG 1 cut(s) 946
BsiHKAI GWGCWC 1 cut(s) 1540
BsiHKCI CYCGRG 1 cut(s) 1908
BsiSI CCGG 7 cut(s) 74, 213, 225, 462, 665, 846, 971
BslFI GGGAC 1 cut(s) 1980
BslI CCNNNNNNNGG 4 cut(s) 670, 920, 970, 1480
BsmAI GTCTC 2 cut(s) 123, 1400
BsmBI CGTCTC 1 cut(s) 123
BsmFI GGGAC 1 cut(s) 1980
BsnI GGCC 5 cut(s) 228, 488, 788, 1242, 1831
Bso31I GGTCTC 1 cut(s) 1400
BsoBI CYCGRG 1 cut(s) 1908
Bsp1286I GDGCHC 2 cut(s) 803, 1540
Bsp13I TCCGGA 1 cut(s) 970
Bsp1407I TGTACA 1 cut(s) 113
Bsp143I GATC 5 cut(s) 30, 346, 505, 943, 973
Bsp19I CCATGG 1 cut(s) 1243
BspACI CCGC 8 cut(s) 65, 126, 222, 252, 381, 432, 687, 1507
BspANI GGCC 5 cut(s) 228, 488, 788, 1242, 1831
BspCNI CTCAG 3 cut(s) 1471, 1568, 1834
BspEI TCCGGA 1 cut(s) 970
BspLI GGNNCC 3 cut(s) 6, 925, 962
BspMI ACCTGC 1 cut(s) 155
BspPI GGATC 2 cut(s) 500, 981
BspT107I GGYRCC 3 cut(s) 4, 923, 960
BspTNI GGTCTC 1 cut(s) 1400
BsrBI CCGCTC 1 cut(s) 381
BsrDI GCAATG 1 cut(s) 1022
BsrFI RCCGGY 4 cut(s) 73, 212, 224, 461
BsrGI TGTACA 1 cut(s) 113
BsrI ACTGG 5 cut(s) 188, 993, 1735, 1807, 1814
BssAI RCCGGY 4 cut(s) 73, 212, 224, 461
BssECI CCNNGG 3 cut(s) 625, 1182, 1243
BssMI GATC 5 cut(s) 30, 346, 505, 943, 973
BssT1I CCWWGG 1 cut(s) 1243
Bst2UI CCWGG 4 cut(s) 445, 485, 627, 921
Bst4CI ACNGT 4 cut(s) 421, 982, 1252, 1660
Bst6I CTCTTC 2 cut(s) 765, 1830
BstAPI GCANNNNNTGC 2 cut(s) 807, 1958
BstAUI TGTACA 1 cut(s) 113
BstC8I GCNNGC 5 cut(s) 226, 928, 1265, 1269, 1959
BstDEI CTNAG 4 cut(s) 645, 1458, 1555, 1821
BstDSI CCRYGG 1 cut(s) 1243
BstF5I GGATG 6 cut(s) 434, 453, 717, 842, 884, 1618
BstHHI GCGC 1 cut(s) 70
BstKTI GATC 5 cut(s) 33, 349, 508, 946, 976
BstMAI GTCTC 2 cut(s) 123, 1400
BstMBI GATC 5 cut(s) 30, 346, 505, 943, 973
BstMCI CGRYCG 1 cut(s) 946
BstMWI GCNNNNNNNGC 6 cut(s) 86, 785, 807, 1634, 1958, 1963
BstNI CCWGG 4 cut(s) 445, 485, 627, 921
BstNSI RCATGY 2 cut(s) 810, 1267
BstPAI GACNNNNGTC 1 cut(s) 915
BstSCI CCNGG 6 cut(s) 443, 483, 625, 663, 845, 919
BstSFI CTRYAG 2 cut(s) 96, 595
BstSLI GKGCMC 1 cut(s) 803
BstV1I GCAGC 6 cut(s) 82, 326, 467, 521, 542, 1110
BstV2I GAAGAC 1 cut(s) 265
BstXI CCANNNNNNTGG 1 cut(s) 1839
BsuI GTATCC 1 cut(s) 709
BsuRI GGCC 5 cut(s) 228, 488, 788, 1242, 1831
BtgI CCRYGG 1 cut(s) 1243
BtsCI GGATG 6 cut(s) 434, 453, 717, 842, 884, 1618
BtsI GCAGTG 2 cut(s) 508, 1015
BtsIMutI CAGTG 3 cut(s) 417, 508, 1015
BveI ACCTGC 1 cut(s) 155
Cac8I GCNNGC 5 cut(s) 226, 928, 1265, 1269, 1959
CfoI GCGC 1 cut(s) 70
Cfr10I RCCGGY 4 cut(s) 73, 212, 224, 461
Cfr13I GGNCC 2 cut(s) 786, 1783
CseI GACGC 1 cut(s) 1982
Csp6I GTAC 6 cut(s) 5, 57, 92, 114, 679, 1729
CspAI ACCGGT 1 cut(s) 461
CspCI CAANNNNNGTGG 2 cut(s) 928, 963
CviAII CATG 9 cut(s) 26, 552, 807, 915, 1044, 1244, 1264, 1497, 1687
CviQI GTAC 6 cut(s) 5, 57, 92, 114, 679, 1729
DdeI CTNAG 4 cut(s) 645, 1458, 1555, 1821
DpnI GATC 5 cut(s) 32, 348, 507, 945, 975
DpnII GATC 5 cut(s) 30, 346, 505, 943, 973
DraIII CACNNNGTG 1 cut(s) 518
EaeI YGGCCR 2 cut(s) 226, 486
Eam1104I CTCTTC 2 cut(s) 765, 1830
EarI CTCTTC 2 cut(s) 765, 1830
EciI GGCGGA 1 cut(s) 211
Ecl136II GAGCTC 1 cut(s) 1538
Eco130I CCWWGG 1 cut(s) 1243
Eco24I GRGCYC 1 cut(s) 1540
Eco31I GGTCTC 1 cut(s) 1400
Eco32I GATATC 2 cut(s) 889, 1588
Eco47I GGWCC 1 cut(s) 1783
Eco53kI GAGCTC 1 cut(s) 1538
Eco88I CYCGRG 1 cut(s) 1908
EcoICRI GAGCTC 1 cut(s) 1538
EcoRI GAATTC 2 cut(s) 1224, 1433
EcoRII CCWGG 4 cut(s) 443, 483, 625, 919
EcoRV GATATC 2 cut(s) 889, 1588
EcoT14I CCWWGG 1 cut(s) 1243
EcoT38I GRGCYC 1 cut(s) 1540
ErhI CCWWGG 1 cut(s) 1243
Esp3I CGTCTC 1 cut(s) 123
FaeI CATG 9 cut(s) 29, 555, 810, 918, 1047, 1247, 1267, 1500, 1690
FaqI GGGAC 1 cut(s) 1980
FatI CATG 9 cut(s) 25, 551, 806, 914, 1043, 1243, 1263, 1496, 1686
FauI CCCGC 1 cut(s) 259
FbaI TGATCA 2 cut(s) 30, 346
Fnu4HI GCNGC 7 cut(s) 66, 71, 340, 481, 535, 556, 1124
FokI GGATG 6 cut(s) 441, 460, 704, 829, 891, 1625
FriOI GRGCYC 1 cut(s) 1540
Fsp4HI GCNGC 7 cut(s) 66, 71, 340, 481, 535, 556, 1124
FspBI CTAG 5 cut(s) 330, 819, 1229, 1424, 1740
GlaI GCGC 1 cut(s) 69
GluI GCNGC 7 cut(s) 66, 71, 340, 481, 535, 556, 1124
GsuI CTGGAG 1 cut(s) 1148
HaeIII GGCC 5 cut(s) 228, 488, 788, 1242, 1831
HapII CCGG 7 cut(s) 74, 213, 225, 462, 665, 846, 971
HgaI GACGC 1 cut(s) 1982
HhaI GCGC 1 cut(s) 70
Hin1II CATG 9 cut(s) 29, 555, 810, 918, 1047, 1247, 1267, 1500, 1690
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HinfI GANTC 6 cut(s) 438, 577, 635, 905, 1882, 2054
HpaII CCGG 7 cut(s) 74, 213, 225, 462, 665, 846, 971
HphI GGTGA 4 cut(s) 313, 433, 1157, 1463
Hpy166II GTNNAC 2 cut(s) 661, 1255
Hpy188I TCNGA 8 cut(s) 85, 261, 403, 576, 910, 1183, 1824, 2059
Hpy188III TCNNGA 8 cut(s) 287, 527, 884, 971, 1583, 1591, 1653, 1901
Hpy8I GTNNAC 2 cut(s) 661, 1255
HpyAV CCTTC 5 cut(s) 878, 1310, 1874, 1916, 1975
HpyCH4III ACNGT 4 cut(s) 421, 982, 1252, 1660
HpyCH4IV ACGT 4 cut(s) 132, 517, 1149, 2061
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 785, 807, 1634, 1958, 1963
HpyF3I CTNAG 4 cut(s) 645, 1458, 1555, 1821
HpySE526I ACGT 4 cut(s) 132, 517, 1149, 2061
Hsp92II CATG 9 cut(s) 29, 555, 810, 918, 1047, 1247, 1267, 1500, 1690
HspAI GCGC 1 cut(s) 68
Kpn2I TCCGGA 1 cut(s) 970
KpnI GGTACC 1 cut(s) 8
KroI GCCGGC 1 cut(s) 224
KroNI GCCGGC 1 cut(s) 226
Ksp22I TGATCA 2 cut(s) 30, 346
Kzo9I GATC 5 cut(s) 30, 346, 505, 943, 973
LmnI GCTCC 2 cut(s) 1019, 1535
Lsp1109I GCAGC 6 cut(s) 82, 326, 467, 521, 542, 1110
LweI GCATC 4 cut(s) 89, 419, 441, 1894
MaeI CTAG 5 cut(s) 330, 819, 1229, 1424, 1740
MaeII ACGT 4 cut(s) 132, 517, 1149, 2061
MaeIII GTNAC 7 cut(s) 170, 200, 307, 494, 1050, 1145, 1689
MalI GATC 5 cut(s) 32, 348, 507, 945, 975
MbiI CCGCTC 1 cut(s) 381
MboI GATC 5 cut(s) 30, 346, 505, 943, 973
MboII GAAGA 6 cut(s) 265, 752, 914, 1131, 1847, 1946
MfeI CAATTG 1 cut(s) 2021
MhlI GDGCHC 2 cut(s) 803, 1540
MlsI TGGCCA 1 cut(s) 488
MluNI TGGCCA 1 cut(s) 488
MlyI GAGTC 1 cut(s) 629
MmeI TCCRAC 2 cut(s) 1170, 1623
Mox20I TGGCCA 1 cut(s) 488
MroI TCCGGA 1 cut(s) 970
MroNI GCCGGC 1 cut(s) 224
MroXI GAANNNNTTC 1 cut(s) 1453
MscI TGGCCA 1 cut(s) 488
MseI TTAA 9 cut(s) 743, 984, 1104, 1152, 1167, 1338, 1383, 1388, 2098
MslI CAYNNNNRTG 4 cut(s) 446, 722, 1374, 1476
Msp20I TGGCCA 1 cut(s) 488
MspA1I CMGCKG 1 cut(s) 779
MspI CCGG 7 cut(s) 74, 213, 225, 462, 665, 846, 971
MspR9I CCNGG 6 cut(s) 445, 485, 627, 665, 847, 921
MunI CAATTG 1 cut(s) 2021
MvaI CCWGG 4 cut(s) 445, 485, 627, 921
MwoI GCNNNNNNNGC 6 cut(s) 86, 785, 807, 1634, 1958, 1963
NaeI GCCGGC 1 cut(s) 226
NciI CCSGG 2 cut(s) 665, 847
NcoI CCATGG 1 cut(s) 1243
NdeII GATC 5 cut(s) 30, 346, 505, 943, 973
NgoMIV GCCGGC 1 cut(s) 224
NlaIII CATG 9 cut(s) 29, 555, 810, 918, 1047, 1247, 1267, 1500, 1690
NlaIV GGNNCC 3 cut(s) 6, 925, 962
NmuCI GTSAC 3 cut(s) 494, 1145, 1689
NspI RCATGY 2 cut(s) 810, 1267
PaeI GCATGC 1 cut(s) 1267
PaeR7I CTCGAG 1 cut(s) 1908
PdiI GCCGGC 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 1453
PfeI GAWTC 5 cut(s) 438, 577, 905, 1882, 2054
PflMI CCANNNNNTGG 1 cut(s) 920
PinAI ACCGGT 1 cut(s) 461
PkrI GCNGC 7 cut(s) 67, 72, 341, 482, 536, 557, 1125
Ple19I CGATCG 1 cut(s) 946
PleI GAGTC 1 cut(s) 629
PpsI GAGTC 1 cut(s) 629
PshAI GACNNNNGTC 1 cut(s) 915
PshBI ATTAAT 2 cut(s) 1338, 1388
PsiI TTATAA 1 cut(s) 1212
Psp124BI GAGCTC 1 cut(s) 1540
Psp6I CCWGG 4 cut(s) 443, 483, 625, 919
PspGI CCWGG 4 cut(s) 443, 483, 625, 919
PspN4I GGNNCC 3 cut(s) 6, 925, 962
PspPI GGNCC 2 cut(s) 786, 1783
PspXI VCTCGAGB 1 cut(s) 1908
PvuI CGATCG 1 cut(s) 946
PvuII CAGCTG 1 cut(s) 779
RsaI GTAC 6 cut(s) 6, 58, 93, 115, 680, 1730
RsaNI GTAC 6 cut(s) 5, 57, 92, 114, 679, 1729
RseI CAYNNNNRTG 4 cut(s) 446, 722, 1374, 1476
SacI GAGCTC 1 cut(s) 1540
SaqAI TTAA 9 cut(s) 743, 984, 1104, 1152, 1167, 1338, 1383, 1388, 2098
SatI GCNGC 7 cut(s) 66, 71, 340, 481, 535, 556, 1124
Sau3AI GATC 5 cut(s) 30, 346, 505, 943, 973
Sau96I GGNCC 2 cut(s) 786, 1783
ScaI AGTACT 2 cut(s) 58, 1730
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 6 cut(s) 445, 485, 627, 665, 847, 921
SduI GDGCHC 2 cut(s) 803, 1540
SfaNI GCATC 4 cut(s) 89, 419, 441, 1894
SfcI CTRYAG 2 cut(s) 96, 595
Sfr274I CTCGAG 1 cut(s) 1908
SinI GGWCC 1 cut(s) 1783
SlaI CTCGAG 1 cut(s) 1908
SmiMI CAYNNNNRTG 4 cut(s) 446, 722, 1374, 1476
SmlI CTYRAG 3 cut(s) 376, 682, 1908
SmoI CTYRAG 3 cut(s) 376, 682, 1908
SphI GCATGC 1 cut(s) 1267
SsiI CCGC 8 cut(s) 65, 126, 222, 252, 381, 432, 687, 1507
SspI AATATT 2 cut(s) 280, 2034
SspMI CTAG 5 cut(s) 330, 819, 1229, 1424, 1740
SstI GAGCTC 1 cut(s) 1540
StyD4I CCNGG 6 cut(s) 443, 483, 625, 663, 845, 919
StyI CCWWGG 1 cut(s) 1243
TaaI ACNGT 4 cut(s) 421, 982, 1252, 1660
TaiI ACGT 4 cut(s) 135, 520, 1152, 2064
TaqI TCGA 4 cut(s) 732, 1582, 1668, 1909
TaqII GACCGA 1 cut(s) 1424
TatI WGTACW 3 cut(s) 56, 113, 1728
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 5 cut(s) 438, 577, 905, 1882, 2054
Tru1I TTAA 9 cut(s) 743, 984, 1104, 1152, 1167, 1338, 1383, 1388, 2098
Tru9I TTAA 9 cut(s) 743, 984, 1104, 1152, 1167, 1338, 1383, 1388, 2098
TscAI CASTG 3 cut(s) 424, 508, 1015
TseFI GTSAC 3 cut(s) 494, 1145, 1689
TseI GCWGC 6 cut(s) 70, 339, 480, 534, 555, 1123
Tsp45I GTSAC 3 cut(s) 494, 1145, 1689
TspGWI ACGGA 1 cut(s) 891
TspRI CASTG 3 cut(s) 424, 508, 1015
Van91I CCANNNNNTGG 1 cut(s) 920
VpaK11BI GGWCC 1 cut(s) 1783
VspI ATTAAT 2 cut(s) 1338, 1388
XapI RAATTY 8 cut(s) 192, 413, 521, 765, 1224, 1433, 1619, 2071
XceI RCATGY 2 cut(s) 810, 1267
XcmI CCANNNNNNNNNTGG 1 cut(s) 1606
XhoI CTCGAG 1 cut(s) 1908
XmnI GAANNNNTTC 1 cut(s) 1453
XspI CTAG 5 cut(s) 330, 819, 1229, 1424, 1740
ZrmI AGTACT 2 cut(s) 58, 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.