Rmu_sc0018944.1_g000002

Wall-associated receptor kinase galacturonan-binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018944.1
OG0000052
Physical Location & Seq
Forward (+)
8957 .. 14094
5138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018944.1_g000002.1.cds

Sequence Viewer

Length: 2349 bp
atgcaatggctagttcagcacatgattttcattctattgttatataaatggcgcataagtacagcatcatcatcaccactgaagatagcgaaggagaactgtacatcgcagtgcggaggtgttagcatcccatacccatttgggataggacccaataaccattgttattttgactcatggtacgaaatagaatgcaacctctctgttccagtagcaaagccgttcttgaggcgtctacaactggaggtgctgaatatttctgtttatggtggaaacacaactgttcaggttccaagccctgttacttacttgagttgcaaagggaagcaatctccgctagcgccaaatctgaccggaagcccttttatgtactctgatgaaaacagtttcgttgcagtcagttgtgattcatttgcctcgctgcgcacagacacgcacactcttactgggtgctcgtcaacgtgtcttgatcaagatattctttccgcttctgaaatgtgcaagtatggttttgactgttgccggactgccctttcccaatttatcactactactttcagcatcacacaagaacgagatgaaacaagaagaaataagacggattgcgaggactatgctttcctggttgaccaacagtggtttgatgaacataaatcagacttcagagctatcaaggatagggacgtcgttcctgtgaaattacactggatcttaagcttagaaaaaaataagtccttgatcaagtcatttgaagcattcacagaagtagacggccggaggaacccaaatgacgcaacacccagctgctatgcatataggtttttgaggaattacacacggtctgatttgtatgactgtatgtgtccgccaggctatgaaggaaatccctaccttctcttaccttgtggagatattgatgaatgcaaggatggtaatccgtgccagggtgatgatcttaatacaactactacatggaacattagtaatgccaaatgtcagaacactgacgggggtcatatatgctactcaaatagaacaggggaaacctgcgaattgtttgcctctgacagagttgctaagtgctaccatcaaagtaggcctcactctcagctcaagcctattctctcaggtctcggtgctggtattggactgttgtcattgcttagtggtgcatggtgggtatacaagtttgtaaagaaatggaagaagattaaacgtaaggagatgttttacaaacgaaatggtggtctattgctagaacaacaattatcgtcaggtgatattaacgttgagagaatcaaactgttcaaatgcaaggagttacagaggtctacaaacaatttcaatgctgatagaattattggtcaaggggggcaaggtactgtttataaaggcatgttgatggatggaagaattgtggctgttaaaaagtcaaaaattgtagacgaggcaaagctttcagaattcatcaatgaggttgtcattctttctcaaatcaaccacaggaatatcgttcaactattgggttgttgtctagagacggaagttcctcttttggtatatgagtttatacctaacggaaacttatctcagtacatccatgaccagaccgaagactttccacttacatgggagattcgtttacgaattgctacagaaattgcaggagctctttcctacttacatgcttcagcttcgtttcccatttatcacagagacatcaagtccacaaacatactcttggatgataaatatagagcaaaaattgctgactttggaacttcaagattagttaccattgaccaaacgcacttgaccacaaacgtacatggcacatttggttatttggatcctgaatactaccaatcgagtcaatttactgagaaaagtgacgtctacagctttggagtggtgcttgttgagctcttgacaggaaaaaaaccagtaacaaggtcagccgaaggcgaaacatacaagagtcttgccacatattttattgtttcgttgcaggaagattctctatttgacattcttgatgctcgagtagtgaatgaaggctctaaacatggtattatggtagtcgctaatcttgcaaaacgatgtttaaatttgaatggaagaaagcgccctacgatgagagagatcacagcagagttggaggccatccaattatcggagaaacttgccgacgctcgtcaacgaagttgtgaaaggattgaatctggccaagattatcgaatcgagcagtgggatgacgttgtttctagctccacaatgtcaacttgggaaggtgctccgactccatcatcagttgaactgcttccactagtttctatgaagacatgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

782

Amino Acids

88.29

Weight (kDa)

6.25

Isoelectric Point (pI)

43.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1389
AatII GACGTC 2 cut(s) 687, 1896
Acc16I TGCGCA 1 cut(s) 425
Acc36I ACCTGC 1 cut(s) 1055
AccI GTMKAC 6 cut(s) 235, 768, 1182, 1331, 1443, 1896
AciI CCGC 4 cut(s) 114, 335, 486, 866
AclI AACGTT 1 cut(s) 1287
AclWI GGATC 3 cut(s) 716, 1844, 1857
AcoI YGGCCR 2 cut(s) 772, 2224
AcsI RAATTY 2 cut(s) 1463, 2107
AcuI CTGAAG 3 cut(s) 101, 646, 1674
AcyI GRCGYC 3 cut(s) 232, 684, 1893
AfaI GTAC 7 cut(s) 61, 103, 182, 371, 1381, 1595, 1827
AfiI CCNNNNNNNGG 2 cut(s) 944, 2173
AflII CTTAAG 1 cut(s) 712
AflIII ACRYGT 2 cut(s) 461, 2342
AgsI TTSAA 8 cut(s) 752, 1309, 1345, 1517, 1785, 2113, 2219, 2315
AhdI GACNNNNNGTC 1 cut(s) 1723
AhlI ACTAGT 1 cut(s) 2326
AjnI CCWGG 3 cut(s) 621, 868, 942
Alw21I GWGCWC 4 cut(s) 455, 1672, 1926, 2296
Alw26I GTCTC 3 cut(s) 1136, 1532, 1710
AlwI GGATC 3 cut(s) 716, 1844, 1857
Ama87I CYCGRG 1 cut(s) 2040
AoxI GGCC 4 cut(s) 772, 1097, 2160, 2224
ApeKI GCWGC 2 cut(s) 421, 804
ApoI RAATTY 2 cut(s) 1463, 2107
ArsI GACNNNNNNTTYG 2 cut(s) 1231, 1263
Asp700I GAANNNNTTC 2 cut(s) 1617, 2319
AspLEI GCGC 4 cut(s) 54, 343, 426, 2127
AspS9I GGNCC 1 cut(s) 149
AsuHPI GGTGA 3 cut(s) 66, 959, 1289
AsuNHI GCTAGC 1 cut(s) 337
AvaI CYCGRG 1 cut(s) 2040
AvaII GGWCC 1 cut(s) 149
BalI TGGCCA 1 cut(s) 2226
BamHI GGATCC 1 cut(s) 1849
BanII GRGCYC 2 cut(s) 1672, 1926
BbsI GAAGAC 2 cut(s) 1620, 2345
Bbv12I GWGCWC 4 cut(s) 455, 1672, 1926, 2296
BbvI GCAGC 2 cut(s) 408, 791
BccI CCATC 6 cut(s) 923, 1095, 1396, 1400, 2171, 2311
BceAI ACGGC 2 cut(s) 205, 787
BcgI CGANNNNNNTGC 4 cut(s) 596, 630, 1040, 1074
BciT130I CCWGG 3 cut(s) 623, 870, 944
BclI TGATCA 2 cut(s) 469, 738
BcoDI GTCTC 3 cut(s) 1136, 1532, 1710
BcuI ACTAGT 1 cut(s) 2326
BfaI CTAG 6 cut(s) 11, 338, 1256, 1535, 2265, 2327
BfmI CTRYAG 2 cut(s) 1653, 1897
BfoI RGCGCY 2 cut(s) 344, 2128
BfrI CTTAAG 1 cut(s) 712
BfuAI ACCTGC 1 cut(s) 1055
BisI GCNGC 2 cut(s) 422, 805
BlsI GCNGC 2 cut(s) 423, 806
Bme1390I CCNGG 3 cut(s) 623, 870, 944
Bme18I GGWCC 1 cut(s) 149
BmeRI GACNNNNNGTC 1 cut(s) 1723
BmeT110I CYCGRG 1 cut(s) 2040
BmgT120I GGNCC 1 cut(s) 149
BmiI GGNNCC 4 cut(s) 151, 291, 782, 1851
BmrFI CCNGG 3 cut(s) 623, 870, 944
BmrI ACTGGG 1 cut(s) 456
BmsI GCATC 4 cut(s) 74, 135, 570, 2026
BmtI GCTAGC 1 cut(s) 341
BmuI ACTGGG 1 cut(s) 456
BoxI GACNNNNGTC 3 cut(s) 1011, 1153, 2193
BpiI GAAGAC 2 cut(s) 1620, 2345
BpmI CTGGAG 1 cut(s) 263
BpuEI CTTGAG 3 cut(s) 247, 331, 1097
BsaBI GATNNNNATC 1 cut(s) 933
BsaHI GRCGYC 3 cut(s) 232, 684, 1893
BsaI GGTCTC 1 cut(s) 1136
BsaJI CCNNGG 1 cut(s) 943
BsaWI WCCGGW 1 cut(s) 353
Bsc4I CCNNNNNNNGG 2 cut(s) 944, 2173
Bse1I ACTGG 5 cut(s) 209, 246, 451, 710, 1943
Bse3DI GCAATG 2 cut(s) 11, 1157
Bse8I GATNNNNATC 1 cut(s) 933
BseBI CCWGG 3 cut(s) 623, 870, 944
BseDI CCNNGG 1 cut(s) 943
BseGI GGATG 7 cut(s) 126, 934, 1411, 1596, 1750, 2163, 2257
BseJI GATNNNNATC 1 cut(s) 933
BseLI CCNNNNNNNGG 2 cut(s) 944, 2173
BseMI GCAATG 2 cut(s) 11, 1157
BseMII CTCAG 4 cut(s) 1121, 1140, 1604, 1872
BseNI ACTGG 5 cut(s) 209, 246, 451, 710, 1943
BseX3I CGGCCG 1 cut(s) 772
BseXI GCAGC 2 cut(s) 408, 791
BseYI CCCAGC 1 cut(s) 800
Bsh1285I CGRYCG 1 cut(s) 775
BshFI GGCC 4 cut(s) 774, 1099, 2162, 2226
BsiEI CGRYCG 1 cut(s) 775
BsiHKAI GWGCWC 4 cut(s) 455, 1672, 1926, 2296
BsiHKCI CYCGRG 1 cut(s) 2040
BsiSI CCGG 3 cut(s) 354, 523, 775
BslFI GGGAC 1 cut(s) 695
BslI CCNNNNNNNGG 2 cut(s) 944, 2173
BsmAI GTCTC 3 cut(s) 1136, 1532, 1710
BsmBI CGTCTC 1 cut(s) 1532
BsmFI GGGAC 1 cut(s) 695
BsmI GAATGC 3 cut(s) 197, 755, 926
BsnI GGCC 4 cut(s) 774, 1099, 2162, 2226
Bso31I GGTCTC 1 cut(s) 1136
BsoBI CYCGRG 1 cut(s) 2040
Bsp1286I GDGCHC 4 cut(s) 455, 1672, 1926, 2296
Bsp1407I TGTACA 1 cut(s) 101
Bsp143I GATC 6 cut(s) 469, 708, 738, 952, 1849, 2142
BspACI CCGC 4 cut(s) 114, 335, 486, 866
BspANI GGCC 4 cut(s) 774, 1099, 2162, 2226
BspCNI CTCAG 4 cut(s) 1120, 1139, 1603, 1873
BspLI GGNNCC 4 cut(s) 151, 291, 782, 1851
BspMI ACCTGC 1 cut(s) 1055
BspOI GCTAGC 1 cut(s) 341
BspPI GGATC 3 cut(s) 716, 1844, 1857
BspTI CTTAAG 1 cut(s) 712
BspTNI GGTCTC 1 cut(s) 1136
BsrDI GCAATG 2 cut(s) 11, 1157
BsrGI TGTACA 1 cut(s) 101
BsrI ACTGG 5 cut(s) 209, 246, 451, 710, 1943
BssECI CCNNGG 1 cut(s) 943
BssMI GATC 6 cut(s) 469, 708, 738, 952, 1849, 2142
BssNAI GTATAC 1 cut(s) 1183
BssNI GRCGYC 3 cut(s) 232, 684, 1893
Bst1107I GTATAC 1 cut(s) 1183
Bst2UI CCWGG 3 cut(s) 623, 870, 944
BstACI GRCGYC 3 cut(s) 232, 684, 1893
BstAFI CTTAAG 1 cut(s) 712
BstAPI GCANNNNNTGC 1 cut(s) 1766
BstAUI TGTACA 1 cut(s) 101
BstC8I GCNNGC 1 cut(s) 339
BstDEI CTNAG 7 cut(s) 718, 1077, 1107, 1126, 1163, 1590, 1881
BstF5I GGATG 7 cut(s) 126, 934, 1411, 1596, 1750, 2163, 2257
BstH2I RGCGCY 2 cut(s) 344, 2128
BstHHI GCGC 4 cut(s) 54, 343, 426, 2127
BstKTI GATC 6 cut(s) 472, 711, 741, 955, 1852, 2145
BstMAI GTCTC 3 cut(s) 1136, 1532, 1710
BstMBI GATC 6 cut(s) 469, 708, 738, 952, 1849, 2142
BstMCI CGRYCG 1 cut(s) 775
BstMWI GCNNNNNNNGC 5 cut(s) 16, 334, 1766, 1921, 2090
BstNI CCWGG 3 cut(s) 623, 870, 944
BstNSI RCATGY 3 cut(s) 1399, 1688, 2346
BstPAI GACNNNNGTC 3 cut(s) 1011, 1153, 2193
BstSCI CCNGG 3 cut(s) 621, 868, 942
BstSFI CTRYAG 2 cut(s) 1653, 1897
BstV1I GCAGC 2 cut(s) 408, 791
BstV2I GAAGAC 2 cut(s) 1620, 2345
BstX2I RGATCY 2 cut(s) 708, 1849
BstXI CCANNNNNNTGG 1 cut(s) 1629
BstYI RGATCY 2 cut(s) 708, 1849
BstZ17I GTATAC 1 cut(s) 1183
BstZI CGGCCG 1 cut(s) 772
BsuRI GGCC 4 cut(s) 774, 1099, 2162, 2226
BtgZI GCGATG 1 cut(s) 90
BtsCI GGATG 7 cut(s) 126, 934, 1411, 1596, 1750, 2163, 2257
BtsI GCAGTG 2 cut(s) 116, 2252
BtsIMutI CAGTG 6 cut(s) 77, 116, 641, 703, 1002, 2252
BveI ACCTGC 1 cut(s) 1055
Cac8I GCNNGC 1 cut(s) 339
CfoI GCGC 4 cut(s) 54, 343, 426, 2127
Cfr13I GGNCC 1 cut(s) 149
CseI GACGC 3 cut(s) 221, 800, 2198
Csp6I GTAC 7 cut(s) 60, 102, 181, 370, 1380, 1594, 1826
CviQI GTAC 7 cut(s) 60, 102, 181, 370, 1380, 1594, 1826
DdeI CTNAG 7 cut(s) 718, 1077, 1107, 1126, 1163, 1590, 1881
DpnI GATC 6 cut(s) 471, 710, 740, 954, 1851, 2144
DpnII GATC 6 cut(s) 469, 708, 738, 952, 1849, 2142
DraI TTTAAA 1 cut(s) 2106
DriI GACNNNNNGTC 1 cut(s) 1723
EaeI YGGCCR 2 cut(s) 772, 2224
EagI CGGCCG 1 cut(s) 772
Eam1105I GACNNNNNGTC 1 cut(s) 1723
EciI GGCGGA 1 cut(s) 855
Ecl136II GAGCTC 2 cut(s) 1670, 1924
EclXI CGGCCG 1 cut(s) 772
Eco147I AGGCCT 1 cut(s) 1099
Eco24I GRGCYC 2 cut(s) 1672, 1926
Eco31I GGTCTC 1 cut(s) 1136
Eco47I GGWCC 1 cut(s) 149
Eco52I CGGCCG 1 cut(s) 772
Eco53kI GAGCTC 2 cut(s) 1670, 1924
Eco57I CTGAAG 3 cut(s) 101, 646, 1674
Eco88I CYCGRG 1 cut(s) 2040
EcoICRI GAGCTC 2 cut(s) 1670, 1924
EcoO109I RGGNCCY 1 cut(s) 149
EcoRI GAATTC 1 cut(s) 1463
EcoRII CCWGG 3 cut(s) 621, 868, 942
EcoT22I ATGCAT 1 cut(s) 814
EcoT38I GRGCYC 2 cut(s) 1672, 1926
Esp3I CGTCTC 1 cut(s) 1532
FalI AAGNNNNNCTT 6 cut(s) 209, 241, 465, 497, 1536, 1568
FaqI GGGAC 1 cut(s) 695
FbaI TGATCA 2 cut(s) 469, 738
FblI GTMKAC 6 cut(s) 235, 768, 1182, 1331, 1443, 1896
Fnu4HI GCNGC 2 cut(s) 422, 805
FokI GGATG 7 cut(s) 113, 941, 1418, 1583, 1757, 2150, 2264
FriOI GRGCYC 2 cut(s) 1672, 1926
Fsp4HI GCNGC 2 cut(s) 422, 805
FspBI CTAG 6 cut(s) 11, 338, 1256, 1535, 2265, 2327
FspI TGCGCA 1 cut(s) 425
GlaI GCGC 4 cut(s) 53, 342, 425, 2126
GluI GCNGC 2 cut(s) 422, 805
GsaI CCCAGC 1 cut(s) 804
GsuI CTGGAG 1 cut(s) 263
HaeII RGCGCY 2 cut(s) 344, 2128
HaeIII GGCC 4 cut(s) 774, 1099, 2162, 2226
HapII CCGG 3 cut(s) 354, 523, 775
HgaI GACGC 3 cut(s) 221, 800, 2198
HhaI GCGC 4 cut(s) 54, 343, 426, 2127
Hin1I GRCGYC 3 cut(s) 232, 684, 1893
Hin6I GCGC 4 cut(s) 52, 341, 424, 2125
HinP1I GCGC 4 cut(s) 52, 341, 424, 2125
HincII GTYRAC 4 cut(s) 459, 628, 2198, 2280
HindII GTYRAC 4 cut(s) 459, 628, 2198, 2280
HindIII AAGCTT 2 cut(s) 715, 1454
HpaII CCGG 3 cut(s) 354, 523, 775
HphI GGTGA 3 cut(s) 66, 959, 1289
Hpy188III TCNNGA 8 cut(s) 226, 467, 473, 1535, 1785, 1853, 1927, 2033
Hpy99I CGWCG 2 cut(s) 689, 2192
HpyAV CCTTC 6 cut(s) 85, 872, 902, 1955, 2048, 2282
HpyCH4IV ACGT 7 cut(s) 461, 684, 1216, 1287, 1824, 1893, 2256
HpyF10VI GCNNNNNNNGC 5 cut(s) 16, 334, 1766, 1921, 2090
HpyF3I CTNAG 7 cut(s) 718, 1077, 1107, 1126, 1163, 1590, 1881
HpySE526I ACGT 7 cut(s) 461, 684, 1216, 1287, 1824, 1893, 2256
Hsp92I GRCGYC 3 cut(s) 232, 684, 1893
HspAI GCGC 4 cut(s) 52, 341, 424, 2125
Ksp22I TGATCA 2 cut(s) 469, 738
Kzo9I GATC 6 cut(s) 469, 708, 738, 952, 1849, 2142
LmnI GCTCC 3 cut(s) 1667, 2273, 2299
Lsp1109I GCAGC 2 cut(s) 408, 791
LweI GCATC 4 cut(s) 74, 135, 570, 2026
MaeI CTAG 6 cut(s) 11, 338, 1256, 1535, 2265, 2327
MaeII ACGT 7 cut(s) 461, 684, 1216, 1287, 1824, 1893, 2256
MaeIII GTNAC 5 cut(s) 301, 1320, 1792, 1889, 1945
MalI GATC 6 cut(s) 471, 710, 740, 954, 1851, 2144
MboI GATC 6 cut(s) 469, 708, 738, 952, 1849, 2142
MboII GAAGA 8 cut(s) 94, 600, 1216, 1219, 1422, 1625, 2024, 2130
MflI RGATCY 2 cut(s) 708, 1849
MhlI GDGCHC 4 cut(s) 455, 1672, 1926, 2296
MlsI TGGCCA 1 cut(s) 2226
MluNI TGGCCA 1 cut(s) 2226
MlyI GAGTC 4 cut(s) 167, 1879, 1987, 2293
MmeI TCCRAC 2 cut(s) 2136, 2321
Mox20I TGGCCA 1 cut(s) 2226
Mph1103I ATGCAT 1 cut(s) 814
MroXI GAANNNNTTC 2 cut(s) 1617, 2319
MscI TGGCCA 1 cut(s) 2226
MseI TTAA 6 cut(s) 713, 957, 1212, 1284, 1425, 2105
MslI CAYNNNNRTG 3 cut(s) 109, 1400, 1627
Msp20I TGGCCA 1 cut(s) 2226
MspA1I CMGCKG 1 cut(s) 804
MspCI CTTAAG 1 cut(s) 712
MspI CCGG 3 cut(s) 354, 523, 775
MspR9I CCNGG 3 cut(s) 623, 870, 944
Mva1269I GAATGC 3 cut(s) 197, 755, 926
MvaI CCWGG 3 cut(s) 623, 870, 944
MwoI GCNNNNNNNGC 5 cut(s) 16, 334, 1766, 1921, 2090
NdeII GATC 6 cut(s) 469, 708, 738, 952, 1849, 2142
NheI GCTAGC 1 cut(s) 337
NlaIV GGNNCC 4 cut(s) 151, 291, 782, 1851
NmuCI GTSAC 1 cut(s) 1889
NsbI TGCGCA 1 cut(s) 425
NsiI ATGCAT 1 cut(s) 814
NspI RCATGY 3 cut(s) 1399, 1688, 2346
PaeR7I CTCGAG 1 cut(s) 2040
PceI AGGCCT 1 cut(s) 1099
PciI ACATGT 1 cut(s) 2342
PctI GAATGC 3 cut(s) 197, 755, 926
PdmI GAANNNNTTC 2 cut(s) 1617, 2319
PfeI GAWTC 6 cut(s) 407, 1296, 1636, 2015, 2219, 2238
PkrI GCNGC 2 cut(s) 423, 806
PleI GAGTC 4 cut(s) 167, 1878, 1986, 2293
PpsI GAGTC 4 cut(s) 167, 1878, 1986, 2293
PpuMI RGGWCCY 1 cut(s) 149
PscI ACATGT 1 cut(s) 2342
PshAI GACNNNNGTC 3 cut(s) 1011, 1153, 2193
PsiI TTATAA 1 cut(s) 1389
Psp124BI GAGCTC 2 cut(s) 1672, 1926
Psp1406I AACGTT 1 cut(s) 1287
Psp5II RGGWCCY 1 cut(s) 149
Psp6I CCWGG 3 cut(s) 621, 868, 942
PspFI CCCAGC 1 cut(s) 800
PspGI CCWGG 3 cut(s) 621, 868, 942
PspN4I GGNNCC 4 cut(s) 151, 291, 782, 1851
PspPI GGNCC 1 cut(s) 149
PspPPI RGGWCCY 1 cut(s) 149
PspXI VCTCGAGB 1 cut(s) 2040
PsuI RGATCY 2 cut(s) 708, 1849
PvuII CAGCTG 1 cut(s) 804
RsaI GTAC 7 cut(s) 61, 103, 182, 371, 1381, 1595, 1827
RsaNI GTAC 7 cut(s) 60, 102, 181, 370, 1380, 1594, 1826
RseI CAYNNNNRTG 3 cut(s) 109, 1400, 1627
SacI GAGCTC 2 cut(s) 1672, 1926
SaqAI TTAA 6 cut(s) 713, 957, 1212, 1284, 1425, 2105
SatI GCNGC 2 cut(s) 422, 805
Sau3AI GATC 6 cut(s) 469, 708, 738, 952, 1849, 2142
Sau96I GGNCC 1 cut(s) 149
SchI GAGTC 4 cut(s) 167, 1879, 1987, 2293
ScrFI CCNGG 3 cut(s) 623, 870, 944
SduI GDGCHC 4 cut(s) 455, 1672, 1926, 2296
SfaNI GCATC 4 cut(s) 74, 135, 570, 2026
SfcI CTRYAG 2 cut(s) 1653, 1897
Sfr274I CTCGAG 1 cut(s) 2040
SinI GGWCC 1 cut(s) 149
SlaI CTCGAG 1 cut(s) 2040
SmiMI CAYNNNNRTG 3 cut(s) 109, 1400, 1627
SmlI CTYRAG 5 cut(s) 226, 310, 712, 1112, 2040
SmoI CTYRAG 5 cut(s) 226, 310, 712, 1112, 2040
SpeI ACTAGT 1 cut(s) 2326
SseBI AGGCCT 1 cut(s) 1099
SsiI CCGC 4 cut(s) 114, 335, 486, 866
SspI AATATT 1 cut(s) 256
SspMI CTAG 6 cut(s) 11, 338, 1256, 1535, 2265, 2327
SstI GAGCTC 2 cut(s) 1672, 1926
StuI AGGCCT 1 cut(s) 1099
StyD4I CCNGG 3 cut(s) 621, 868, 942
TaiI ACGT 7 cut(s) 464, 687, 1219, 1290, 1827, 1896, 2259
TaqI TCGA 4 cut(s) 1868, 2041, 2236, 2241
TaqII GACCGA 1 cut(s) 1625
TatI WGTACW 4 cut(s) 59, 101, 369, 1593
TfiI GAWTC 6 cut(s) 407, 1296, 1636, 2015, 2219, 2238
Tru1I TTAA 6 cut(s) 713, 957, 1212, 1284, 1425, 2105
Tru9I TTAA 6 cut(s) 713, 957, 1212, 1284, 1425, 2105
TscAI CASTG 6 cut(s) 84, 116, 641, 710, 1009, 2252
TseFI GTSAC 1 cut(s) 1889
TseI GCWGC 2 cut(s) 421, 804
Tsp45I GTSAC 1 cut(s) 1889
TspDTI ATGAA 9 cut(s) 19, 393, 399, 594, 660, 891, 933, 1456, 2067
TspGWI ACGGA 4 cut(s) 614, 927, 1556, 1593
TspRI CASTG 6 cut(s) 84, 116, 641, 710, 1009, 2252
Vha464I CTTAAG 1 cut(s) 712
VpaK11BI GGWCC 1 cut(s) 149
XapI RAATTY 2 cut(s) 1463, 2107
XbaI TCTAGA 1 cut(s) 1534
XceI RCATGY 3 cut(s) 1399, 1688, 2346
XhoI CTCGAG 1 cut(s) 2040
XmiI GTMKAC 6 cut(s) 235, 768, 1182, 1331, 1443, 1896
XmnI GAANNNNTTC 2 cut(s) 1617, 2319
XspI CTAG 6 cut(s) 11, 338, 1256, 1535, 2265, 2327
ZraI GACGTC 2 cut(s) 685, 1894
Zsp2I ATGCAT 1 cut(s) 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.