MD17G1132000.v1.1

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
11745634 .. 11748260
2627 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1132000.v1.1.491

Sequence Viewer

Length: 2292 bp
ATGGGGAACTCGGATTTTTTCCGTCACGTTCAAGGGCAGAGAGAGAGAGAGAGAGAGATGAAAATGGTGGTACAAATTTTTCAGATGGTTTTGTTGTTGTGGCAAATGAGTAGTGCATTGGCACAATCACAGTCTTTAGCATTGCCTGTAGCATTGCCTGATTGCCAAGCACAGTGTGGGAGTGTTACGATTCCATACCCTTTTGGAATTGGACCCAACTGCTACCTTGATGAATGGTTTTCGATATCCTGCAATGATACTTATAATCCTTCCAAGCCTTTCTTAAATAGCACCAAACTCGAAGTTCTGAATGTATCGATGGAACTAGGCACAGTTCGTGTCAACTATCCTGCAAAGTCAACGTGTGGTGATATGAGCAGTGCCTATGTGATGAGCTTGGAAGGAGGCCCTTTTGTTTTCTCCCAATCCAAAAATAGATTCACTGCTGTCGGATGCAACAACTTGGCTCTGATGACAATGGTCAACGGTTCGACCATTGGCGGGTGCTTATCTTTCTGCCGAAGTGGTTTAACTGCAAGTAGTAGTACCTGCAATGGGATTGACTGCTGCCAGACAACAATCCCTTCGGATCTTCAGGTGTTCAATACAACTATAGAGAGCGTGGAAACCGGGGAACCCACAGAGGGATGCAAGTATGCATTCTTAGTAGACCGACAATGGTTTGAGAACGAAGGACTAAGAAAAGCCTCAGACATACAAAACATGGACTCCCTTCCTGTGGTGCTGGAGTGGAGGATAGATAGACGGACATATGACTCGCTTGCAACGAATAAATCAATAGCTTTCAACAATTCAACTGTGTGTGAAAGTGGAAGTTTCGTCAATTCCACCTCTTTTAGTAACAAGAACTCCATGGTTCGATGTTCTTGCAAAAGGGGATACGAAGGAAATCCGTATCTTCCTGATGGATGCCAAGATATCGATGAATGTGTGGATCCACAGAGCCCTTGTTTGCTAGAAAATCTTGGATATACTTTTATCTGTAATAATACTATTGGGAGTTATGAATGTTACTTTTTCGGTCCTCCTGAAAAGAAGAAATCTGCAGTGAAACCAGTGGTTATAGGTATTGGTGCAAGCTTGGGGCTATTACTTCTTCTTGCTACTGCGTGGTGGTTATACAAGGTGGTGAAGAAAAGAAATGACACTAAACGCCGAGAGAAGTTCTTCAAACAAAACGGTGGCTTTTTTATCAAAGAACAATTGAGCTCCGGTGAAGTCAATGTTGAGAAAATAAAAATATTTGATCCAAAGGAGCTAGAGAAGGCCACAGATCATTTTAATGTGAACAGAATACTTGGTCAGGGAGGCCAAGGTACCGTTTACAAAGGAATGTTGACAGATGGAAGACTTGTTGCAGTGAAAAAGTCGAAGGTGATTGATGAAGGGAAACTCAGGCCTTTCATTAACGAGATTGTCATTCTTTCACAACTTAACCACAGGAATGTGGTTAAGCTATTCGGGTGTTGTTTGGAGACAAATGTTCCTCTACTGGTGTATGAATATGTTCCCAATGGTACCCTTTTCGAGTATATCCACGAAGATAATGAAGAGTTTCCTCTTCTGTGGGATATGCGCTTGAGAATTGCCATTGAGGTCGCCGGAGCTCTTTTCTACCTGCACTCATCAGCTTCCATTCCCATTTATCATCGTGATATTAAATCCACAAACATACTTTTAGATGACAAGTACAGAGCAAAAGTAGCTGATTTTGGAACTTCAAGATCAATTTCCATTGATCAAACTCATGTAACAACACTAGTACAAGGCACTTTTGGATACTTGGATCCGGAGTACTTCCAGTCAAGCCAATTCACTGAAAAGAGCGATGTTTATAGCTTCGGAGTAGTCCTCATTGAGCTCTTGACGAGTCAAAAACCAATTTCATTCACAAGATCGGAAGAAGGCAGAAGTCTAGCCACATACTTCATTCTTAAAATGGAAGAGAAACGTCTATTTGATATCGTTGATGTTCGGATTACGGAGGGAAGTAAAGAACAGATTGAGGCAGTTGCTTGCCTTGCAAGAAGATGCTTGGACTTGAATGGAAAGAGACGTCCCACGATGAAAGAAGTTGCAATGGAGCTGGAAGGGATTAAAAAATCAGTTAAAGGTTCTAATGTGCAGCAAAATCATGAAGAAGTTGAATATGTTCCAAATGAAGTGACTGATCCTTGGGATGTTGTTTCTACATCATCAAGTTCAGTTGTGGACAGTAGTACTGCTTCATCAACTGATCGGCTTCTGCTATCGTCGTCCAAATTACGATGA

Protein Analysis

764

Amino Acids

85.35

Weight (kDa)

5.77

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 55 - 115 2.5e-11 Wall-associated receptor kinase galacturonan-binding
WAK PF08488 182 - 254 1.8e-09 Wall-associated kinase
Pkinase PF00069 434 - 699 4.1e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 436 - 703 1.2e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 264
AatII GACGTC 1 cut(s) 2080
Acc36I ACCTGC 2 cut(s) 557, 1647
Acc65I GGTACC 2 cut(s) 1337, 1538
AccB1I GGYRCC 2 cut(s) 1337, 1538
AccI GTMKAC 1 cut(s) 669
AccIII TCCGGA 1 cut(s) 1810
AciI CCGC 1 cut(s) 501
AclWI GGATC 7 cut(s) 597, 950, 963, 1262, 1802, 1815, 2186
AcsI RAATTY 1 cut(s) 75
AcuI CTGAAG 1 cut(s) 578
AcyI GRCGYC 1 cut(s) 2077
AdeI CACNNNGTG 1 cut(s) 176
AfaI GTAC 8 cut(s) 72, 547, 1339, 1540, 1712, 1785, 1817, 2242
AfiI CCNNNNNNNGG 4 cut(s) 501, 555, 644, 739
AflIII ACRYGT 1 cut(s) 362
AgsI TTSAA 8 cut(s) 32, 604, 808, 816, 1192, 1743, 2065, 2168
AhlI ACTAGT 1 cut(s) 1780
AjuI GAANNNNNNNTTGG 2 cut(s) 422, 454
Alw21I GWGCWC 3 cut(s) 1232, 1630, 1884
Alw26I GTCTC 2 cut(s) 1490, 2068
AlwI GGATC 7 cut(s) 597, 950, 963, 1262, 1802, 1815, 2186
Aor13HI TCCGGA 1 cut(s) 1810
AoxI GGCC 4 cut(s) 406, 1287, 1330, 1418
ApeKI GCWGC 2 cut(s) 567, 2146
ApoI RAATTY 1 cut(s) 75
Asp700I GAANNNNTTC 4 cut(s) 1187, 1527, 1575, 2172
Asp718I GGTACC 2 cut(s) 1337, 1538
AspLEI GCGC 1 cut(s) 1599
AspS9I GGNCC 3 cut(s) 212, 407, 1043
AsuC2I CCSGG 1 cut(s) 631
AsuHPI GGTGA 4 cut(s) 380, 1162, 1247, 1408
AvaII GGWCC 2 cut(s) 212, 1043
BamHI GGATCC 2 cut(s) 955, 1807
BanI GGYRCC 2 cut(s) 1337, 1538
BanII GRGCYC 4 cut(s) 968, 1232, 1630, 1884
BarI GAAGNNNNNNTAC 2 cut(s) 2230, 2262
BbsI GAAGAC 1 cut(s) 1375
Bbv12I GWGCWC 3 cut(s) 1232, 1630, 1884
BbvI GCAGC 2 cut(s) 554, 2158
BccI CCATC 4 cut(s) 79, 313, 920, 1358
BcgI CGANNNNNNTGC 4 cut(s) 280, 314, 870, 904
BciVI GTATCC 2 cut(s) 893, 1793
BclI TGATCA 1 cut(s) 1759
BcnI CCSGG 1 cut(s) 631
BcoDI GTCTC 2 cut(s) 1490, 2068
BcuI ACTAGT 1 cut(s) 1780
BfaI CTAG 5 cut(s) 326, 977, 1280, 1781, 1937
BfmI CTRYAG 3 cut(s) 147, 612, 1065
BfuAI ACCTGC 2 cut(s) 557, 1647
BfuI GTATCC 2 cut(s) 893, 1793
BisI GCNGC 2 cut(s) 568, 2147
BlsI GCNGC 2 cut(s) 569, 2148
BmcAI AGTACT 2 cut(s) 1817, 2242
Bme1390I CCNGG 1 cut(s) 631
Bme18I GGWCC 2 cut(s) 212, 1043
BmgT120I GGNCC 3 cut(s) 212, 407, 1043
BmiI GGNNCC 6 cut(s) 214, 636, 957, 1339, 1540, 1809
BmrFI CCNGG 1 cut(s) 631
BmsI GCATC 4 cut(s) 443, 638, 920, 2042
BoxI GACNNNNGTC 1 cut(s) 479
BpiI GAAGAC 1 cut(s) 1375
BplI GAGNNNNNCTC 2 cut(s) 1857, 1889
BpmI CTGGAG 1 cut(s) 767
BpuEI CTTGAG 1 cut(s) 1621
BpuMI CCSGG 1 cut(s) 631
Bsa29I ATCGAT 2 cut(s) 317, 942
BsaHI GRCGYC 1 cut(s) 2077
BsaJI CCNNGG 4 cut(s) 630, 873, 1333, 2195
BsaWI WCCGGW 2 cut(s) 1232, 1810
BsaXI ACNNNNNCTCC 4 cut(s) 713, 743, 854, 884
Bsc4I CCNNNNNNNGG 4 cut(s) 501, 555, 644, 739
Bse1I ACTGG 3 cut(s) 1076, 1518, 1822
Bse3DI GCAATG 5 cut(s) 140, 152, 259, 559, 2106
BseAI TCCGGA 1 cut(s) 1810
BseCI ATCGAT 2 cut(s) 317, 942
BseDI CCNNGG 4 cut(s) 630, 873, 1333, 2195
BseGI GGATG 4 cut(s) 458, 653, 935, 2206
BseLI CCNNNNNNNGG 4 cut(s) 501, 555, 644, 739
BseMI GCAATG 5 cut(s) 140, 152, 259, 559, 2106
BseMII CTCAG 2 cut(s) 723, 1429
BseNI ACTGG 3 cut(s) 1076, 1518, 1822
BseXI GCAGC 2 cut(s) 554, 2158
BsgI GTGCAG 2 cut(s) 1625, 2165
BshFI GGCC 4 cut(s) 408, 1289, 1332, 1420
BshNI GGYRCC 2 cut(s) 1337, 1538
BshVI ATCGAT 2 cut(s) 317, 942
BsiHKAI GWGCWC 3 cut(s) 1232, 1630, 1884
BsiSI CCGG 4 cut(s) 630, 1233, 1623, 1811
BslFI GGGAC 1 cut(s) 2064
BslI CCNNNNNNNGG 4 cut(s) 501, 555, 644, 739
BsmAI GTCTC 2 cut(s) 1490, 2068
BsmBI CGTCTC 1 cut(s) 2068
BsmFI GGGAC 1 cut(s) 2064
BsmI GAATGC 1 cut(s) 659
BsnI GGCC 4 cut(s) 408, 1289, 1332, 1420
Bsp1286I GDGCHC 4 cut(s) 968, 1232, 1630, 1884
Bsp13I TCCGGA 1 cut(s) 1810
Bsp19I CCATGG 1 cut(s) 873
BspACI CCGC 1 cut(s) 501
BspANI GGCC 4 cut(s) 408, 1289, 1332, 1420
BspCNI CTCAG 2 cut(s) 722, 1428
BspDI ATCGAT 2 cut(s) 317, 942
BspEI TCCGGA 1 cut(s) 1810
BspHI TCATGA 1 cut(s) 2155
BspLI GGNNCC 6 cut(s) 214, 636, 957, 1339, 1540, 1809
BspMAI CTGCAG 1 cut(s) 1069
BspMI ACCTGC 2 cut(s) 557, 1647
BspPI GGATC 7 cut(s) 597, 950, 963, 1262, 1802, 1815, 2186
BspT107I GGYRCC 2 cut(s) 1337, 1538
BsrDI GCAATG 5 cut(s) 140, 152, 259, 559, 2106
BsrI ACTGG 3 cut(s) 1076, 1518, 1822
BssECI CCNNGG 4 cut(s) 630, 873, 1333, 2195
BssNI GRCGYC 1 cut(s) 2077
BssT1I CCWWGG 3 cut(s) 873, 1333, 2195
Bst4CI ACNGT 8 cut(s) 132, 174, 334, 488, 820, 1202, 1342, 2237
Bst6I CTCTTC 3 cut(s) 1566, 1587, 1959
BstACI GRCGYC 1 cut(s) 2077
BstC8I GCNNGC 3 cut(s) 783, 1099, 2038
BstDEI CTNAG 4 cut(s) 664, 698, 709, 1415
BstDSI CCRYGG 1 cut(s) 873
BstF5I GGATG 4 cut(s) 458, 653, 935, 2206
BstHHI GCGC 1 cut(s) 1599
BstMAI GTCTC 2 cut(s) 1490, 2068
BstMWI GCNNNNNNNGC 2 cut(s) 1724, 2042
BstPAI GACNNNNGTC 1 cut(s) 479
BstSCI CCNGG 1 cut(s) 629
BstSFI CTRYAG 3 cut(s) 147, 612, 1065
BstV1I GCAGC 2 cut(s) 554, 2158
BstV2I GAAGAC 1 cut(s) 1375
BstX2I RGATCY 3 cut(s) 589, 955, 1807
BstYI RGATCY 3 cut(s) 589, 955, 1807
Bsu15I ATCGAT 2 cut(s) 317, 942
BsuI GTATCC 2 cut(s) 893, 1793
BsuRI GGCC 4 cut(s) 408, 1289, 1332, 1420
BsuTUI ATCGAT 2 cut(s) 317, 942
BtgI CCRYGG 1 cut(s) 873
BtgZI GCGATG 1 cut(s) 1863
BtsCI GGATG 4 cut(s) 458, 653, 935, 2206
BtsI GCAGTG 4 cut(s) 385, 441, 1074, 1386
BtsIMutI CAGTG 7 cut(s) 179, 385, 441, 1074, 1083, 1386, 1836
BveI ACCTGC 2 cut(s) 557, 1647
Cac8I GCNNGC 3 cut(s) 783, 1099, 2038
CciI TCATGA 1 cut(s) 2155
CfoI GCGC 1 cut(s) 1599
Cfr13I GGNCC 3 cut(s) 212, 407, 1043
ClaI ATCGAT 2 cut(s) 317, 942
Csp6I GTAC 8 cut(s) 71, 546, 1338, 1539, 1711, 1784, 1816, 2241
CviAII CATG 4 cut(s) 724, 874, 1769, 2156
CviQI GTAC 8 cut(s) 71, 546, 1338, 1539, 1711, 1784, 1816, 2241
DdeI CTNAG 4 cut(s) 664, 698, 709, 1415
DraIII CACNNNGTG 1 cut(s) 176
Eam1104I CTCTTC 3 cut(s) 1566, 1587, 1959
EarI CTCTTC 3 cut(s) 1566, 1587, 1959
Ecl136II GAGCTC 3 cut(s) 1230, 1628, 1882
Eco130I CCWWGG 3 cut(s) 873, 1333, 2195
Eco147I AGGCCT 1 cut(s) 1420
Eco24I GRGCYC 4 cut(s) 968, 1232, 1630, 1884
Eco32I GATATC 3 cut(s) 246, 940, 1984
Eco47I GGWCC 2 cut(s) 212, 1043
Eco53kI GAGCTC 3 cut(s) 1230, 1628, 1882
Eco57I CTGAAG 1 cut(s) 578
EcoICRI GAGCTC 3 cut(s) 1230, 1628, 1882
EcoO109I RGGNCCY 1 cut(s) 407
EcoRV GATATC 3 cut(s) 246, 940, 1984
EcoT14I CCWWGG 3 cut(s) 873, 1333, 2195
EcoT22I ATGCAT 1 cut(s) 661
EcoT38I GRGCYC 4 cut(s) 968, 1232, 1630, 1884
ErhI CCWWGG 3 cut(s) 873, 1333, 2195
Esp3I CGTCTC 1 cut(s) 2068
FaeI CATG 4 cut(s) 727, 877, 1772, 2159
FalI AAGNNNNNCTT 2 cut(s) 266, 298
FaqI GGGAC 1 cut(s) 2064
FatI CATG 4 cut(s) 723, 873, 1768, 2155
FauI CCCGC 1 cut(s) 494
FauNDI CATATG 1 cut(s) 772
FbaI TGATCA 1 cut(s) 1759
FblI GTMKAC 1 cut(s) 669
Fnu4HI GCNGC 2 cut(s) 568, 2147
FokI GGATG 4 cut(s) 465, 660, 942, 2213
FriOI GRGCYC 4 cut(s) 968, 1232, 1630, 1884
Fsp4HI GCNGC 2 cut(s) 568, 2147
FspBI CTAG 5 cut(s) 326, 977, 1280, 1781, 1937
GlaI GCGC 1 cut(s) 1598
GluI GCNGC 2 cut(s) 568, 2147
GsuI CTGGAG 1 cut(s) 767
HaeIII GGCC 4 cut(s) 408, 1289, 1332, 1420
HapII CCGG 4 cut(s) 630, 1233, 1623, 1811
HhaI GCGC 1 cut(s) 1599
Hin1I GRCGYC 1 cut(s) 2077
Hin1II CATG 4 cut(s) 727, 877, 1772, 2159
Hin6I GCGC 1 cut(s) 1597
HinP1I GCGC 1 cut(s) 1597
HincII GTYRAC 4 cut(s) 343, 360, 484, 1359
HindII GTYRAC 4 cut(s) 343, 360, 484, 1359
HindIII AAGCTT 1 cut(s) 1099
HinfI GANTC 5 cut(s) 190, 438, 728, 776, 1891
HpaII CCGG 4 cut(s) 630, 1233, 1623, 1811
HphI GGTGA 4 cut(s) 380, 1162, 1247, 1408
Hpy166II GTNNAC 8 cut(s) 343, 360, 484, 670, 1309, 1345, 1359, 2233
Hpy188III TCNNGA 7 cut(s) 923, 1049, 1673, 1743, 1811, 1885, 2156
Hpy8I GTNNAC 8 cut(s) 343, 360, 484, 670, 1309, 1345, 1359, 2233
Hpy99I CGWCG 1 cut(s) 2278
HpyCH4III ACNGT 8 cut(s) 132, 174, 334, 488, 820, 1202, 1342, 2237
HpyCH4IV ACGT 4 cut(s) 27, 362, 1972, 2077
HpyF10VI GCNNNNNNNGC 2 cut(s) 1724, 2042
HpyF3I CTNAG 4 cut(s) 664, 698, 709, 1415
HpySE526I ACGT 4 cut(s) 27, 362, 1972, 2077
Hsp92I GRCGYC 1 cut(s) 2077
Hsp92II CATG 4 cut(s) 727, 877, 1772, 2159
HspAI GCGC 1 cut(s) 1597
Kpn2I TCCGGA 1 cut(s) 1810
KpnI GGTACC 2 cut(s) 1341, 1542
Ksp22I TGATCA 1 cut(s) 1759
LmnI GCTCC 4 cut(s) 1235, 1276, 1625, 2104
Lsp1109I GCAGC 2 cut(s) 554, 2158
LweI GCATC 4 cut(s) 443, 638, 920, 2042
MaeI CTAG 5 cut(s) 326, 977, 1280, 1781, 1937
MaeII ACGT 4 cut(s) 27, 362, 1972, 2077
MaeIII GTNAC 6 cut(s) 23, 184, 860, 1031, 1771, 2185
MfeI CAATTG 1 cut(s) 1223
MflI RGATCY 3 cut(s) 589, 955, 1807
MhlI GDGCHC 4 cut(s) 968, 1232, 1630, 1884
MlyI GAGTC 3 cut(s) 722, 770, 1900
MmeI TCCRAC 1 cut(s) 430
Mph1103I ATGCAT 1 cut(s) 661
MroI TCCGGA 1 cut(s) 1810
MroXI GAANNNNTTC 4 cut(s) 1187, 1527, 1575, 2172
MslI CAYNNNNRTG 2 cut(s) 1302, 1464
MspI CCGG 4 cut(s) 630, 1233, 1623, 1811
MspR9I CCNGG 1 cut(s) 631
MunI CAATTG 1 cut(s) 1223
Mva1269I GAATGC 1 cut(s) 659
MwoI GCNNNNNNNGC 2 cut(s) 1724, 2042
NciI CCSGG 1 cut(s) 631
NcoI CCATGG 1 cut(s) 873
NdeI CATATG 1 cut(s) 772
NlaIII CATG 4 cut(s) 727, 877, 1772, 2159
NlaIV GGNNCC 6 cut(s) 214, 636, 957, 1339, 1540, 1809
NmeAIII GCCGAG 1 cut(s) 1202
NmuCI GTSAC 2 cut(s) 23, 2185
NsiI ATGCAT 1 cut(s) 661
PagI TCATGA 1 cut(s) 2155
PceI AGGCCT 1 cut(s) 1420
PcsI WCGNNNNNNNCGW 1 cut(s) 785
PctI GAATGC 1 cut(s) 659
PdmI GAANNNNTTC 4 cut(s) 1187, 1527, 1575, 2172
PfeI GAWTC 2 cut(s) 190, 438
PkrI GCNGC 2 cut(s) 569, 2148
PleI GAGTC 3 cut(s) 722, 770, 1899
PpsI GAGTC 3 cut(s) 722, 770, 1899
PshAI GACNNNNGTC 1 cut(s) 479
PsiI TTATAA 1 cut(s) 264
Psp124BI GAGCTC 3 cut(s) 1232, 1630, 1884
PspN4I GGNNCC 6 cut(s) 214, 636, 957, 1339, 1540, 1809
PspPI GGNCC 3 cut(s) 212, 407, 1043
PstI CTGCAG 1 cut(s) 1069
PsuI RGATCY 3 cut(s) 589, 955, 1807
RsaI GTAC 8 cut(s) 72, 547, 1339, 1540, 1712, 1785, 1817, 2242
RsaNI GTAC 8 cut(s) 71, 546, 1338, 1539, 1711, 1784, 1816, 2241
RseI CAYNNNNRTG 2 cut(s) 1302, 1464
SacI GAGCTC 3 cut(s) 1232, 1630, 1884
SatI GCNGC 2 cut(s) 568, 2147
Sau96I GGNCC 3 cut(s) 212, 407, 1043
ScaI AGTACT 2 cut(s) 1817, 2242
SchI GAGTC 3 cut(s) 722, 770, 1900
ScrFI CCNGG 1 cut(s) 631
SduI GDGCHC 4 cut(s) 968, 1232, 1630, 1884
SfaNI GCATC 4 cut(s) 443, 638, 920, 2042
SfcI CTRYAG 3 cut(s) 147, 612, 1065
SinI GGWCC 2 cut(s) 212, 1043
SmiMI CAYNNNNRTG 2 cut(s) 1302, 1464
SmlI CTYRAG 1 cut(s) 1600
SmoI CTYRAG 1 cut(s) 1600
SpeI ACTAGT 1 cut(s) 1780
SseBI AGGCCT 1 cut(s) 1420
SsiI CCGC 1 cut(s) 501
SspI AATATT 1 cut(s) 1263
SspMI CTAG 5 cut(s) 326, 977, 1280, 1781, 1937
SstI GAGCTC 3 cut(s) 1232, 1630, 1884
StuI AGGCCT 1 cut(s) 1420
StyD4I CCNGG 1 cut(s) 629
StyI CCWWGG 3 cut(s) 873, 1333, 2195
TaaI ACNGT 8 cut(s) 132, 174, 334, 488, 820, 1202, 1342, 2237
TaiI ACGT 4 cut(s) 30, 365, 1975, 2080
TaqI TCGA 8 cut(s) 242, 300, 317, 491, 880, 942, 1391, 1548
TaqII GACCGA 2 cut(s) 687, 1031
TatI WGTACW 4 cut(s) 1710, 1783, 1815, 2240
TfiI GAWTC 2 cut(s) 190, 438
TscAI CASTG 7 cut(s) 179, 385, 448, 1074, 1083, 1386, 1843
TseFI GTSAC 2 cut(s) 23, 2185
TseI GCWGC 2 cut(s) 567, 2146
Tsp45I GTSAC 2 cut(s) 23, 2185
TspGWI ACGGA 4 cut(s) 11, 781, 903, 2018
TspRI CASTG 7 cut(s) 179, 385, 448, 1074, 1083, 1386, 1843
VpaK11BI GGWCC 2 cut(s) 212, 1043
XapI RAATTY 1 cut(s) 75
XcmI CCANNNNNNNNNTGG 1 cut(s) 173
XmiI GTMKAC 1 cut(s) 669
XmnI GAANNNNTTC 4 cut(s) 1187, 1527, 1575, 2172
XspI CTAG 5 cut(s) 326, 977, 1280, 1781, 1937
ZraI GACGTC 1 cut(s) 2078
ZrmI AGTACT 2 cut(s) 1817, 2242
Zsp2I ATGCAT 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.