Rh2DG504900

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
72850540 .. 72853063
2524 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG504900.1

Sequence Viewer

Length: 1848 bp
ATGGCTGCCTGTTTGTCTCTTTGCGGAGGCAACAGTAGCATATTAGTAGATAGTACCTGCCGAGGTATCAACTGTTGTCAGACACCCCTTCCTTCTCGCATTCGTGCAGCCTTCAGTAGTTTTGCACCGTTGATGATAACACCCGGTAACAGTTTAGCGGTACCATCCTGTACCGCCGTTGAACCGGTACGACCCAGTGAACCGGTATCGGATCCGCTAAAACCCATTAACAATTGTACCATACCCTATCCCGGCACACTGGTAGTGGGTAGAAATTGTACGTATGCATTCCTCGTAGATCCTGAGTGGTTTATGTCAAATTCAACAAATATTTCTGCCATTGCTGAGATGGACGACGTCCCCATAGTGTTAGATTGGTCGATGGATGGAAGTATAGATAATTCCACTGAGGATAACGTGAACAGAAATTGCGAATCTGATGATGGTCCATGTTCCTGCTTAGAGGGCTATCAAGGAAACCCCTATCTTCGTGATGGATGTCAAGATATCGATGAATGCGTGGATCCAAAACGCTGTGGTTCCAATATTTGTTCCAATTTTAATGGGTCCTTTTATTGCTACGAGCCGCTGTCCCAACAACCTCGGCCATTGCAGCCGATTAAACTGGGCATTATAGTTCTCTGCAGTGTTTTTGGACTGTTGTTTCATATCATTGGCGCATGGTGGTTGCACAAAATCATAAAGAAGAGGAAAAACATTAAGCTCGAGCAGAAGTTTTTTAGACTGAATGGTGGTTTGTTGTTGGAGCAACAGTTATCTTCTGGCGAAGTCAATGTTGAGAAGATTAAGCTGTTCAATGCAAAGGAGTTAGAGAAAGCCACAGACCGGTTTAATGTAGACAGAATTCTCGGTGAAGGAGGCCAAGGTACTGTTTATAAAGGAATGTTGACAGATGGAAAAATTGTTGCTGTCAAGAGGTCAAAAATAGTAGATGGAGGAGAAGTGAATCAATTCATTAATGAAATTGTCATTCTTTCACAAATTAACCACAGGAATGTGGTTAAACTCTTGGGATGTTGTTTAGAGAGCGAAGTTCCCCTATTGGTCTATGAATTTTTACCCAACGGAACCCTTTCTCAATACATTCACAGCCGTGATGAGGATTTTCCTCCAACTTGGGAAATGCGATTACGAGTTGGTATGGAAGTTGCTGGAGCCCTTTCCTACTTACATTCATCTGCTTCAATGCCCATTTACCATCGAGACATTAAGTCTTCAAACATACTCTTGGATGATAAATATAGAGCAAAAGTTGCAGACTTTGGGACATCAAGAACTGTTTCCATTGACAAAACACATCTTACCATGACACATGTAAACGGAACATTTGGTTATTTGGACCCTGAGTACTTCCAGTCTAGCCAATTTACAGACAAGAGCGACGTTTATAGCTTCGGAGTAGTCCTTGCCGAACTCTTGACTGGACAAAAACCAGTTAATGTAACAAGATCGCAGGAAGGGAAACAAGATGGGAGAAGCCTAGCAACACATTTTATTGTGTCCATGGAGAAGAGTTGTTTGTTTGATATTCTTGATGCTGAAGTTATGAAGGGAGGTAAGAAAGAAGAGATAGTGGCGGTTGCTAATCTTGCAAAACGTTGCTTGAATATGAAAGGAAAGAAGCGTCCAACTATGAAAGAAATAGCAGTTGAGTTGGAGGGAATTCTAATGTCAAGTAAATCTTCTGATGTCGAACACATTGCAGAGGTTGAACATGTCCAGACGGAAATAGCCGAGGTTTGGGATGTTTCTACATCAGCAGGCTCTCATATGGACACCGGTTCTTCATTAGATGTACAACCATTACTGTCTTTCAAGTCTTGCTGA

Protein Analysis

615

Amino Acids

67.88

Weight (kDa)

5.46

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 284 - 555 7.9e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 286 - 558 9.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 897
AatII GACGTC 1 cut(s) 360
Acc36I ACCTGC 1 cut(s) 65
Acc65I GGTACC 1 cut(s) 160
AccB1I GGYRCC 1 cut(s) 160
AccI GTMKAC 1 cut(s) 858
AciI CCGC 6 cut(s) 24, 158, 174, 215, 587, 1598
AclI AACGTT 1 cut(s) 1618
AclWI GGATC 5 cut(s) 206, 219, 293, 518, 531
AcoI YGGCCR 1 cut(s) 605
AcsI RAATTY 4 cut(s) 319, 864, 1073, 1683
AcuI CTGAAG 2 cut(s) 97, 1581
AcyI GRCGYC 1 cut(s) 357
AfaI GTAC 9 cut(s) 55, 162, 172, 189, 238, 280, 889, 1370, 1818
AfiI CCNNNNNNNGG 4 cut(s) 251, 846, 1120, 1761
AflIII ACRYGT 2 cut(s) 1333, 1735
AgeI ACCGGT 4 cut(s) 184, 202, 846, 1799
AgsI TTSAA 8 cut(s) 182, 324, 817, 1206, 1239, 1627, 1733, 1837
AhdI GACNNNNNGTC 1 cut(s) 1231
AleI CACNNNNGTG 1 cut(s) 1113
AluBI AGCT 3 cut(s) 724, 811, 1413
AluI AGCT 3 cut(s) 724, 811, 1413
Alw26I GTCTC 2 cut(s) 21, 1218
AlwI GGATC 5 cut(s) 206, 219, 293, 518, 531
Ama87I CYCGRG 1 cut(s) 725
AoxI GGCC 2 cut(s) 605, 880
ApeKI GCWGC 3 cut(s) 5, 107, 613
ApoI RAATTY 4 cut(s) 319, 864, 1073, 1683
AseI ATTAAT 1 cut(s) 978
AsiGI ACCGGT 4 cut(s) 184, 202, 846, 1799
Asp700I GAANNNNTTC 3 cut(s) 971, 1093, 1300
Asp718I GGTACC 1 cut(s) 160
AspLEI GCGC 1 cut(s) 680
AspS9I GGNCC 3 cut(s) 446, 567, 1360
AsuC2I CCSGG 2 cut(s) 144, 252
AsuHPI GGTGA 1 cut(s) 884
AvaI CYCGRG 1 cut(s) 725
AvaII GGWCC 3 cut(s) 446, 567, 1360
BaeI ACNNNNGTAYC 2 cut(s) 220, 253
BamHI GGATCC 2 cut(s) 211, 523
BanI GGYRCC 1 cut(s) 160
BanII GRGCYC 1 cut(s) 1180
BbsI GAAGAC 1 cut(s) 1227
BbvI GCAGC 2 cut(s) 119, 625
BceAI ACGGC 2 cut(s) 161, 1098
BcgI CGANNNNNNTGC 2 cut(s) 1703, 1737
BcnI CCSGG 2 cut(s) 144, 252
BcoDI GTCTC 2 cut(s) 21, 1218
BfaI CTAG 2 cut(s) 1380, 1502
BfmI CTRYAG 1 cut(s) 643
BfuAI ACCTGC 1 cut(s) 65
BisI GCNGC 4 cut(s) 6, 108, 587, 614
BlsI GCNGC 4 cut(s) 7, 109, 588, 615
BmcAI AGTACT 1 cut(s) 1370
Bme1390I CCNGG 2 cut(s) 144, 252
Bme18I GGWCC 3 cut(s) 446, 567, 1360
BmeRI GACNNNNNGTC 1 cut(s) 1231
BmeT110I CYCGRG 1 cut(s) 725
BmgT120I GGNCC 3 cut(s) 446, 567, 1360
BmiI GGNNCC 8 cut(s) 162, 213, 525, 541, 568, 1090, 1177, 1362
BmrFI CCNGG 2 cut(s) 144, 252
BmrI ACTGGG 2 cut(s) 189, 635
BmsI GCATC 1 cut(s) 1546
BmuI ACTGGG 2 cut(s) 189, 635
BpiI GAAGAC 1 cut(s) 1227
BpmI CTGGAG 1 cut(s) 1194
BpuMI CCSGG 2 cut(s) 144, 252
Bsa29I ATCGAT 1 cut(s) 510
BsaAI YACGTR 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 357
BsaJI CCNNGG 5 cut(s) 61, 602, 883, 1524, 1755
BsaWI WCCGGW 4 cut(s) 184, 202, 846, 1799
BsaXI ACNNNNNCTCC 4 cut(s) 758, 788, 948, 978
Bsc4I CCNNNNNNNGG 4 cut(s) 251, 846, 1120, 1761
Bse118I RCCGGY 4 cut(s) 184, 202, 846, 1799
Bse1I ACTGG 6 cut(s) 195, 264, 630, 1375, 1447, 1454
Bse3DI GCAATG 3 cut(s) 339, 608, 1719
BseCI ATCGAT 1 cut(s) 510
BseDI CCNNGG 5 cut(s) 61, 602, 883, 1524, 1755
BseGI GGATG 6 cut(s) 164, 391, 503, 1040, 1258, 1771
BseLI CCNNNNNNNGG 4 cut(s) 251, 846, 1120, 1761
BseMI GCAATG 3 cut(s) 339, 608, 1719
BseMII CTCAG 4 cut(s) 294, 336, 399, 1356
BseNI ACTGG 6 cut(s) 195, 264, 630, 1375, 1447, 1454
BseRI GAGGAG 1 cut(s) 972
BseXI GCAGC 2 cut(s) 119, 625
BsgI GTGCAG 1 cut(s) 126
BshFI GGCC 2 cut(s) 607, 882
BshNI GGYRCC 1 cut(s) 160
BshTI ACCGGT 4 cut(s) 184, 202, 846, 1799
BshVI ATCGAT 1 cut(s) 510
BsiHKCI CYCGRG 1 cut(s) 725
BsiSI CCGG 6 cut(s) 144, 185, 203, 252, 847, 1800
BslFI GGGAC 3 cut(s) 344, 577, 1300
BslI CCNNNNNNNGG 4 cut(s) 251, 846, 1120, 1761
BsmAI GTCTC 2 cut(s) 21, 1218
BsmFI GGGAC 3 cut(s) 344, 577, 1300
BsmI GAATGC 3 cut(s) 99, 287, 521
BsnI GGCC 2 cut(s) 607, 882
BsoBI CYCGRG 1 cut(s) 725
Bsp1286I GDGCHC 1 cut(s) 1180
Bsp1407I TGTACA 1 cut(s) 1816
Bsp143I GATC 4 cut(s) 211, 298, 523, 1469
Bsp19I CCATGG 1 cut(s) 1524
BspACI CCGC 6 cut(s) 24, 158, 174, 215, 587, 1598
BspANI GGCC 2 cut(s) 607, 882
BspCNI CTCAG 4 cut(s) 295, 337, 400, 1357
BspDI ATCGAT 1 cut(s) 510
BspLI GGNNCC 8 cut(s) 162, 213, 525, 541, 568, 1090, 1177, 1362
BspMAI CTGCAG 1 cut(s) 647
BspMI ACCTGC 1 cut(s) 65
BspPI GGATC 5 cut(s) 206, 219, 293, 518, 531
BspT107I GGYRCC 1 cut(s) 160
BsrDI GCAATG 3 cut(s) 339, 608, 1719
BsrFI RCCGGY 4 cut(s) 184, 202, 846, 1799
BsrGI TGTACA 1 cut(s) 1816
BsrI ACTGG 6 cut(s) 195, 264, 630, 1375, 1447, 1454
BssAI RCCGGY 4 cut(s) 184, 202, 846, 1799
BssECI CCNNGG 5 cut(s) 61, 602, 883, 1524, 1755
BssMI GATC 4 cut(s) 211, 298, 523, 1469
BssNI GRCGYC 1 cut(s) 357
BssT1I CCWWGG 2 cut(s) 883, 1524
Bst4CI ACNGT 9 cut(s) 35, 74, 129, 152, 660, 774, 892, 1300, 1830
Bst6I CTCTTC 3 cut(s) 701, 1526, 1581
BstACI GRCGYC 1 cut(s) 357
BstAPI GCANNNNNTGC 1 cut(s) 1274
BstAUI TGTACA 1 cut(s) 1816
BstBAI YACGTR 1 cut(s) 282
BstC8I GCNNGC 1 cut(s) 1783
BstDEI CTNAG 5 cut(s) 303, 345, 408, 460, 1365
BstDSI CCRYGG 1 cut(s) 1524
BstF5I GGATG 6 cut(s) 164, 391, 503, 1040, 1258, 1771
BstHHI GCGC 1 cut(s) 680
BstKTI GATC 4 cut(s) 214, 301, 526, 1472
BstMAI GTCTC 2 cut(s) 21, 1218
BstMBI GATC 4 cut(s) 211, 298, 523, 1469
BstMWI GCNNNNNNNGC 5 cut(s) 36, 465, 613, 1274, 1610
BstNSI RCATGY 2 cut(s) 1337, 1739
BstSCI CCNGG 2 cut(s) 142, 250
BstSFI CTRYAG 1 cut(s) 643
BstSNI TACGTA 1 cut(s) 282
BstV1I GCAGC 2 cut(s) 119, 625
BstV2I GAAGAC 1 cut(s) 1227
BstX2I RGATCY 3 cut(s) 211, 298, 523
BstYI RGATCY 3 cut(s) 211, 298, 523
Bsu15I ATCGAT 1 cut(s) 510
BsuRI GGCC 2 cut(s) 607, 882
BsuTUI ATCGAT 1 cut(s) 510
BtgI CCRYGG 1 cut(s) 1524
BtsCI GGATG 6 cut(s) 164, 391, 503, 1040, 1258, 1771
BtsI GCAGTG 1 cut(s) 652
BtsIMutI CAGTG 4 cut(s) 202, 257, 405, 652
BveI ACCTGC 1 cut(s) 65
Cac8I GCNNGC 1 cut(s) 1783
CfoI GCGC 1 cut(s) 680
Cfr10I RCCGGY 4 cut(s) 184, 202, 846, 1799
Cfr13I GGNCC 3 cut(s) 446, 567, 1360
ClaI ATCGAT 1 cut(s) 510
CseI GACGC 1 cut(s) 1634
Csp6I GTAC 9 cut(s) 54, 161, 171, 188, 237, 279, 888, 1369, 1817
CspAI ACCGGT 4 cut(s) 184, 202, 846, 1799
CviAII CATG 6 cut(s) 450, 681, 1327, 1334, 1525, 1736
CviQI GTAC 9 cut(s) 54, 161, 171, 188, 237, 279, 888, 1369, 1817
DdeI CTNAG 5 cut(s) 303, 345, 408, 460, 1365
DpnI GATC 4 cut(s) 213, 300, 525, 1471
DpnII GATC 4 cut(s) 211, 298, 523, 1469
DriI GACNNNNNGTC 1 cut(s) 1231
EaeI YGGCCR 1 cut(s) 605
Eam1104I CTCTTC 3 cut(s) 701, 1526, 1581
Eam1105I GACNNNNNGTC 1 cut(s) 1231
EarI CTCTTC 3 cut(s) 701, 1526, 1581
Eco105I TACGTA 1 cut(s) 282
Eco130I CCWWGG 2 cut(s) 883, 1524
Eco24I GRGCYC 1 cut(s) 1180
Eco32I GATATC 1 cut(s) 508
Eco47I GGWCC 3 cut(s) 446, 567, 1360
Eco57I CTGAAG 2 cut(s) 97, 1581
Eco88I CYCGRG 1 cut(s) 725
EcoO109I RGGNCCY 1 cut(s) 567
EcoRI GAATTC 2 cut(s) 864, 1683
EcoRV GATATC 1 cut(s) 508
EcoT14I CCWWGG 2 cut(s) 883, 1524
EcoT22I ATGCAT 1 cut(s) 289
EcoT38I GRGCYC 1 cut(s) 1180
ErhI CCWWGG 2 cut(s) 883, 1524
FaeI CATG 6 cut(s) 453, 684, 1330, 1337, 1528, 1739
FalI AAGNNNNNCTT 2 cut(s) 1687, 1719
FaqI GGGAC 3 cut(s) 344, 577, 1300
FatI CATG 6 cut(s) 449, 680, 1326, 1333, 1524, 1735
FauNDI CATATG 1 cut(s) 1791
FblI GTMKAC 1 cut(s) 858
Fnu4HI GCNGC 4 cut(s) 6, 108, 587, 614
FokI GGATG 6 cut(s) 151, 398, 510, 1047, 1265, 1778
FriOI GRGCYC 1 cut(s) 1180
Fsp4HI GCNGC 4 cut(s) 6, 108, 587, 614
FspBI CTAG 2 cut(s) 1380, 1502
GlaI GCGC 1 cut(s) 679
GluI GCNGC 4 cut(s) 6, 108, 587, 614
GsuI CTGGAG 1 cut(s) 1194
HaeIII GGCC 2 cut(s) 607, 882
HapII CCGG 6 cut(s) 144, 185, 203, 252, 847, 1800
HgaI GACGC 1 cut(s) 1634
HhaI GCGC 1 cut(s) 680
Hin1I GRCGYC 1 cut(s) 357
Hin1II CATG 6 cut(s) 453, 684, 1330, 1337, 1528, 1739
Hin6I GCGC 1 cut(s) 678
HinP1I GCGC 1 cut(s) 678
HincII GTYRAC 1 cut(s) 909
HindII GTYRAC 1 cut(s) 909
HinfI GANTC 2 cut(s) 434, 967
HpaII CCGG 6 cut(s) 144, 185, 203, 252, 847, 1800
HphI GGTGA 1 cut(s) 884
Hpy166II GTNNAC 5 cut(s) 200, 421, 859, 909, 1339
Hpy188I TCNGA 5 cut(s) 81, 211, 439, 1418, 1708
Hpy188III TCNNGA 9 cut(s) 302, 491, 503, 934, 1223, 1293, 1438, 1553, 1741
Hpy8I GTNNAC 5 cut(s) 200, 421, 859, 909, 1339
Hpy99I CGWCG 2 cut(s) 359, 1406
HpyAV CCTTC 6 cut(s) 98, 102, 121, 869, 1472, 1564
HpyCH4III ACNGT 9 cut(s) 35, 74, 129, 152, 660, 774, 892, 1300, 1830
HpyCH4IV ACGT 5 cut(s) 281, 357, 417, 1404, 1618
HpyF10VI GCNNNNNNNGC 5 cut(s) 36, 465, 613, 1274, 1610
HpyF3I CTNAG 5 cut(s) 303, 345, 408, 460, 1365
HpySE526I ACGT 5 cut(s) 281, 357, 417, 1404, 1618
Hsp92I GRCGYC 1 cut(s) 357
Hsp92II CATG 6 cut(s) 453, 684, 1330, 1337, 1528, 1739
HspAI GCGC 1 cut(s) 678
KpnI GGTACC 1 cut(s) 164
Kzo9I GATC 4 cut(s) 211, 298, 523, 1469
LmnI GCTCC 2 cut(s) 766, 1175
Lsp1109I GCAGC 2 cut(s) 119, 625
LweI GCATC 1 cut(s) 1546
MaeI CTAG 2 cut(s) 1380, 1502
MaeII ACGT 5 cut(s) 281, 357, 417, 1404, 1618
MaeIII GTNAC 2 cut(s) 146, 1462
MalI GATC 4 cut(s) 213, 300, 525, 1471
MboI GATC 4 cut(s) 211, 298, 523, 1469
MboII GAAGA 9 cut(s) 479, 718, 771, 814, 1227, 1543, 1598, 1695, 1797
MfeI CAATTG 1 cut(s) 232
MflI RGATCY 3 cut(s) 211, 298, 523
MhlI GDGCHC 1 cut(s) 1180
MmeI TCCRAC 4 cut(s) 744, 1157, 1656, 1673
Mph1103I ATGCAT 1 cut(s) 289
MroXI GAANNNNTTC 3 cut(s) 971, 1093, 1300
MslI CAYNNNNRTG 2 cut(s) 1014, 1113
MspA1I CMGCKG 1 cut(s) 589
MspI CCGG 6 cut(s) 144, 185, 203, 252, 847, 1800
MspR9I CCNGG 2 cut(s) 144, 252
MunI CAATTG 1 cut(s) 232
Mva1269I GAATGC 3 cut(s) 99, 287, 521
MwoI GCNNNNNNNGC 5 cut(s) 36, 465, 613, 1274, 1610
NciI CCSGG 2 cut(s) 144, 252
NcoI CCATGG 1 cut(s) 1524
NdeI CATATG 1 cut(s) 1791
NdeII GATC 4 cut(s) 211, 298, 523, 1469
NlaIII CATG 6 cut(s) 453, 684, 1330, 1337, 1528, 1739
NlaIV GGNNCC 8 cut(s) 162, 213, 525, 541, 568, 1090, 1177, 1362
NmeAIII GCCGAG 3 cut(s) 86, 583, 1780
NsiI ATGCAT 1 cut(s) 289
NspI RCATGY 2 cut(s) 1337, 1739
OliI CACNNNNGTG 1 cut(s) 1113
PaeR7I CTCGAG 1 cut(s) 725
PciI ACATGT 2 cut(s) 1333, 1735
PcsI WCGNNNNNNNCGW 1 cut(s) 516
PctI GAATGC 3 cut(s) 99, 287, 521
PdmI GAANNNNTTC 3 cut(s) 971, 1093, 1300
PfeI GAWTC 2 cut(s) 434, 967
PflFI GACNNNGTC 1 cut(s) 356
PinAI ACCGGT 4 cut(s) 184, 202, 846, 1799
PkrI GCNGC 4 cut(s) 7, 109, 588, 615
Ppu21I YACGTR 1 cut(s) 282
PpuMI RGGWCCY 1 cut(s) 567
PscI ACATGT 2 cut(s) 1333, 1735
PshBI ATTAAT 1 cut(s) 978
PsiI TTATAA 1 cut(s) 897
Psp1406I AACGTT 1 cut(s) 1618
Psp5II RGGWCCY 1 cut(s) 567
PspN4I GGNNCC 8 cut(s) 162, 213, 525, 541, 568, 1090, 1177, 1362
PspPI GGNCC 3 cut(s) 446, 567, 1360
PspPPI RGGWCCY 1 cut(s) 567
PspXI VCTCGAGB 1 cut(s) 725
PstI CTGCAG 1 cut(s) 647
PsuI RGATCY 3 cut(s) 211, 298, 523
PsyI GACNNNGTC 1 cut(s) 356
RsaI GTAC 9 cut(s) 55, 162, 172, 189, 238, 280, 889, 1370, 1818
RsaNI GTAC 9 cut(s) 54, 161, 171, 188, 237, 279, 888, 1369, 1817
RseI CAYNNNNRTG 2 cut(s) 1014, 1113
SatI GCNGC 4 cut(s) 6, 108, 587, 614
Sau3AI GATC 4 cut(s) 211, 298, 523, 1469
Sau96I GGNCC 3 cut(s) 446, 567, 1360
ScaI AGTACT 1 cut(s) 1370
ScrFI CCNGG 2 cut(s) 144, 252
SduI GDGCHC 1 cut(s) 1180
SfaNI GCATC 1 cut(s) 1546
SfcI CTRYAG 1 cut(s) 643
Sfr274I CTCGAG 1 cut(s) 725
SinI GGWCC 3 cut(s) 446, 567, 1360
SlaI CTCGAG 1 cut(s) 725
SmiMI CAYNNNNRTG 2 cut(s) 1014, 1113
SmlI CTYRAG 1 cut(s) 725
SmoI CTYRAG 1 cut(s) 725
SnaBI TACGTA 1 cut(s) 282
SsiI CCGC 6 cut(s) 24, 158, 174, 215, 587, 1598
SspI AATATT 2 cut(s) 331, 547
SspMI CTAG 2 cut(s) 1380, 1502
StyD4I CCNGG 2 cut(s) 142, 250
StyI CCWWGG 2 cut(s) 883, 1524
TaaI ACNGT 9 cut(s) 35, 74, 129, 152, 660, 774, 892, 1300, 1830
TaiI ACGT 5 cut(s) 284, 360, 420, 1407, 1621
TaqI TCGA 5 cut(s) 380, 510, 726, 1222, 1713
TatI WGTACW 2 cut(s) 1368, 1816
TauI GCSGC 1 cut(s) 589
TfiI GAWTC 2 cut(s) 434, 967
TscAI CASTG 4 cut(s) 202, 264, 412, 652
TseI GCWGC 3 cut(s) 5, 107, 613
TspGWI ACGGA 3 cut(s) 1101, 1356, 1760
TspRI CASTG 4 cut(s) 202, 264, 412, 652
Tth111I GACNNNGTC 1 cut(s) 356
VpaK11BI GGWCC 3 cut(s) 446, 567, 1360
VspI ATTAAT 1 cut(s) 978
XapI RAATTY 4 cut(s) 319, 864, 1073, 1683
XceI RCATGY 2 cut(s) 1337, 1739
XcmI CCANNNNNNNNNTGG 1 cut(s) 346
XhoI CTCGAG 1 cut(s) 725
XmiI GTMKAC 1 cut(s) 858
XmnI GAANNNNTTC 3 cut(s) 971, 1093, 1300
XspI CTAG 2 cut(s) 1380, 1502
ZraI GACGTC 1 cut(s) 358
ZrmI AGTACT 1 cut(s) 1370
Zsp2I ATGCAT 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.