Prupe.3G181900_v2.0.a1

wall-associated receptor kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000052
Physical Location & Seq
Reverse (-)
19782303 .. 19785515
3213 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G181900.1

Sequence Viewer

Length: 2346 bp
ATGACAATACTGTTAGATCAACACATGATTTTCAGTCTTCTCTTTTGCCTCTGGCACATAAGTATTGCACAAGCAGCATCAAGAGCAGAAGCCCCGCCCATAGCAATGCCTAATTGCACAATGCTATGCGGAGGTGTGAGCATCCCTTACCCTTTTGGCATTGGTCCAAGCACCAATTGTTTCTTAAACGAGTGGTTTCAAATAGACTGCAACAAGTCTACTGGGCACAAGCCGTTCTTGCGGCGTGCCCAACTGGAGGTGCTCAACATTTCTATCAATGGCACGCTTCGCGTTAACAGCCCCGTCACTTTTCTGTGCAACACCAAGAAGGGAAATTCAAGTCACCAACTGCTGGCAAATTTGACGGGAAGCTTCTTTGTGTTCTCTCAGAGGCACAACATATTCACTGCAGTGAGTTGCGGCTTGCTTGCCGTTGTGACAAGCTCAAATGACGATGAAATGGTTGCTGTTACCGATAAAATCATCGGTGGGTGCAGGTCCATTTGTGATAGCTTTCAAAAGGGTAGGTCAAACTATGATGGCTGCGATGGTATTAACTGTTGCCAAACTACAATTCCACCAAACCTCACTTCCGTCACCACTCACATTCTATATGCAAACGCATCGGCTATAGATTGTACGAACTACCCTCCAACGGACTATATCTATGAGAAAAATAATAACTATGCGTTCCTGGTTGACCGGGAATGGTTTGACAACACTTCATCAAGAGCCGTCCAGGCGATGGAGAAGGTCCCTGTGGTGCTAGAATGGGCCTTACAGTATGATAATAATGTAACCGATCTACTGTTCACTAGCTTCATTCATGGTGAAAGAAATCGTTCCAGGCGGCATGATCCAACACCTTATTGTGAGGTCGATGAAACTTCCACTTATTCTTTTTCACCACGGCATATGGCCGCATCGTTTTACTGTCACTGCCCGGAAGGCTTCGAAGGAAATCCCTATCTTCGACAATCTTGCCATGACATTGATGAATGCTCGTACAACCCTACTATATGCTTGGCCGGAAGCAAGTGTGTGAACGACTATGGGGAGTACCATTGCTCCGTGAATAAAATGCGTACTCTCAAGTGGGCCCTTAAAGGTCTTGGCTCGGGTCTTGGACTAATATTGCTACTTATTGGTCTATGGCTGGGATACAGACTCATAAAGAAAAGGAATGACATTAAAAAAAAAAAGAAGTTTTTCAAACGAAATGGCGGTTTGTTGTTAGAACAACAATTATCGTCTGGTGAAGTTAACGTTGAGAGAATCAAGTTGTTCAAATCCACAGAGTTAGAGAAATCTACTGACAATTTTAATGTCAATAGAATTCTAGGTCAAGGAGGACAAGGTACTGTTTACAAAGGAATGTTGACGGATGGTAGGATCGTTGCTGTAAAAAAGTCTAAAGTAGTTGATGAAGGCCAACTTTCAGAGTTCATCAATGAAGTTGTGATTCTTTCACAAATCAACCACAGGAATGTGGTTAAAATACTGGGTTGCTGCTTAGAGACTGAAGTTCCTCTTTTGGTTTATGAATTCATACCCAATGGAACTCTTTATCAGTATATCCAAGGACAGATTGAAGAGTTTCAACTTACATGGCAAATGCGCTTACGCATTGCCTTGGAAATTTCAGGTGCTCTTTCGTACTTACACTCTGCAGCTTCCTTTCCCATATATCACAGAGACATTAAGTCTACCAACATACTCTTGGACGAAAGGTACAGAGCAAAAGTTGCTGACTTTGGAACTTCGAGATCAATTGTCATAGGCCAAACTCACCTGACCACAGTTATACATGGAACATTTGGTTATTTGGACCCGGAATACTTTCGGTCAAGCCAATTTACTGAGAAAAGTGATGTCTATAGCTTTGGAGTGGTACTTGTTGAGCTCTTGACTGGAGAAAAACACATTTCTTTAGTAACAAGCTCAGCGAAAGAAAAAGAATACAGAAGTCTTGCTGCATATTTCATTACATCGATGGAGGAAGATCGTCTGTTAGACATTGTTGATGCTCTGGTTTTGAAGGAGGGCTCTGAAATAGAGATTAGGGTAGTTGCTAACCTTGCAAGAAGATGTTTGAATTTGAATGGAAGGAATCGACCTACAATGAGAGAGGTCACAGCGGAGTTGGAGGCACTTCAAATGGCAGAAAAATCCTCTAATACTCAACAAAATTATGAAGATGTGGAATTTGTCGAACATAAATCTATTGAGCAATGGGGTGCTGTTTCAAGTTCAACAGGAACAGGATGGTCAGCTTGGGATCGTGATGGTGATGATCCAACTTCGTCATTACTCGAACTTCCACAATTATCTGTGCAAACATGGTGA

Protein Analysis

782

Amino Acids

87.82

Weight (kDa)

6.06

Isoelectric Point (pI)

40.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 486
AccB7I CCANNNNNTGG 2 cut(s) 352, 745
AccI GTMKAC 2 cut(s) 218, 1706
AccII CGCG 1 cut(s) 291
AciI CCGC 8 cut(s) 95, 129, 241, 420, 850, 921, 1224, 2138
AclI AACGTT 1 cut(s) 1266
AclWI GGATC 4 cut(s) 851, 1400, 2286, 2288
AcoI YGGCCR 2 cut(s) 918, 1026
AcsI RAATTY 7 cut(s) 334, 358, 1335, 1544, 1638, 2095, 2204
AcuI CTGAAG 1 cut(s) 1542
AfaI GTAC 8 cut(s) 640, 1007, 1061, 1087, 1360, 1658, 1733, 1893
AfiI CCNNNNNNNGG 4 cut(s) 256, 352, 655, 745
AhdI GACNNNNNGTC 1 cut(s) 1702
AjnI CCWGG 3 cut(s) 693, 738, 845
AjuI GAANNNNNNNTTGG 4 cut(s) 558, 574, 590, 606
AleI CACNNNNGTG 1 cut(s) 410
AluBI AGCT 9 cut(s) 372, 444, 513, 819, 1673, 1881, 1903, 1941, 2273
AluI AGCT 9 cut(s) 372, 444, 513, 819, 1673, 1881, 1903, 1941, 2273
Alw21I GWGCWC 3 cut(s) 264, 1651, 1905
Alw26I GTCTC 2 cut(s) 1511, 1689
AlwI GGATC 4 cut(s) 851, 1400, 2286, 2288
Ama87I CYCGRG 1 cut(s) 1117
AoxI GGCC 6 cut(s) 774, 918, 1026, 1098, 1429, 1780
ApaI GGGCCC 1 cut(s) 1102
ApeKI GCWGC 5 cut(s) 74, 543, 1509, 1670, 1973
ApoI RAATTY 7 cut(s) 334, 358, 1335, 1544, 1638, 2095, 2204
Asp700I GAANNNNTTC 4 cut(s) 841, 1208, 1596, 1839
AspLEI GCGC 1 cut(s) 1620
AspS9I GGNCC 7 cut(s) 164, 498, 754, 774, 1098, 1099, 1828
AsuC2I CCSGG 3 cut(s) 704, 944, 1832
AsuHPI GGTGA 7 cut(s) 335, 589, 842, 897, 1268, 1781, 2300
AsuII TTCGAA 1 cut(s) 954
AvaI CYCGRG 1 cut(s) 1117
AvaII GGWCC 4 cut(s) 164, 498, 754, 1828
BaeGI GKGCMC 3 cut(s) 228, 250, 1102
BanII GRGCYC 3 cut(s) 1102, 1905, 2048
BbsI GAAGAC 1 cut(s) 29
Bbv12I GWGCWC 3 cut(s) 264, 1651, 1905
BbvI GCAGC 5 cut(s) 86, 530, 1496, 1682, 1960
BccI CCATC 7 cut(s) 533, 542, 739, 1379, 1987, 2259, 2279
BceAI ACGGC 4 cut(s) 217, 416, 719, 926
BcgI CGANNNNNNTGC 4 cut(s) 606, 640, 963, 997
BciT130I CCWGG 3 cut(s) 695, 740, 847
BciVI GTATCC 1 cut(s) 1154
BcnI CCSGG 3 cut(s) 704, 944, 1832
BcoDI GTCTC 2 cut(s) 1511, 1689
BfaI CTAG 3 cut(s) 767, 816, 1340
BfmI CTRYAG 4 cut(s) 408, 630, 1668, 1876
BfuAI ACCTGC 1 cut(s) 486
BfuI GTATCC 1 cut(s) 1154
BglI GCCNNNNNGGC 2 cut(s) 740, 948
BisI GCNGC 9 cut(s) 75, 242, 421, 544, 851, 921, 1510, 1671, 1974
BlpI GCTNAGC 1 cut(s) 1942
BlsI GCNGC 9 cut(s) 76, 243, 422, 545, 852, 922, 1511, 1672, 1975
Bme1390I CCNGG 6 cut(s) 695, 704, 740, 847, 944, 1832
Bme18I GGWCC 4 cut(s) 164, 498, 754, 1828
BmeRI GACNNNNNGTC 1 cut(s) 1702
BmeT110I CYCGRG 1 cut(s) 1117
BmgT120I GGNCC 7 cut(s) 164, 498, 754, 774, 1098, 1099, 1828
BmiI GGNNCC 3 cut(s) 756, 1100, 1830
BmrFI CCNGG 6 cut(s) 695, 704, 740, 847, 944, 1832
BmrI ACTGGG 2 cut(s) 231, 1511
BmsI GCATC 5 cut(s) 86, 150, 632, 932, 2014
BmuI ACTGGG 2 cut(s) 231, 1511
BpiI GAAGAC 1 cut(s) 29
BpmI CTGGAG 2 cut(s) 275, 1932
Bpu1102I GCTNAGC 1 cut(s) 1942
Bpu14I TTCGAA 1 cut(s) 954
BpuEI CTTGAG 1 cut(s) 1076
BpuMI CCSGG 3 cut(s) 704, 944, 1832
Bsa29I ATCGAT 1 cut(s) 1991
BsaJI CCNNGG 3 cut(s) 908, 1579, 1632
BsaXI ACNNNNNCTCC 2 cut(s) 1052, 1082
Bsc4I CCNNNNNNNGG 4 cut(s) 256, 352, 655, 745
Bse1I ACTGG 4 cut(s) 226, 258, 1506, 1915
Bse3DI GCAATG 4 cut(s) 111, 1063, 1626, 2237
BseBI CCWGG 3 cut(s) 695, 740, 847
BseCI ATCGAT 1 cut(s) 1991
BseDI CCNNGG 3 cut(s) 908, 1579, 1632
BseGI GGATG 3 cut(s) 141, 1390, 2270
BseLI CCNNNNNNNGG 4 cut(s) 256, 352, 655, 745
BseMI GCAATG 4 cut(s) 111, 1063, 1626, 2237
BseMII CTCAG 3 cut(s) 401, 1851, 1956
BseNI ACTGG 4 cut(s) 226, 258, 1506, 1915
BseSI GKGCMC 3 cut(s) 228, 250, 1102
BseXI GCAGC 5 cut(s) 86, 530, 1496, 1682, 1960
BseYI CCCAGC 1 cut(s) 1156
BsgI GTGCAG 1 cut(s) 514
Bsh1236I CGCG 1 cut(s) 291
BshFI GGCC 6 cut(s) 776, 920, 1028, 1100, 1431, 1782
BshVI ATCGAT 1 cut(s) 1991
BsiHKAI GWGCWC 3 cut(s) 264, 1651, 1905
BsiHKCI CYCGRG 1 cut(s) 1117
BsiSI CCGG 4 cut(s) 703, 944, 1029, 1832
BslFI GGGAC 1 cut(s) 740
BslI CCNNNNNNNGG 4 cut(s) 256, 352, 655, 745
BsmAI GTCTC 2 cut(s) 1511, 1689
BsmFI GGGAC 1 cut(s) 740
BsmI GAATGC 1 cut(s) 1004
BsnI GGCC 6 cut(s) 776, 920, 1028, 1100, 1431, 1782
BsoBI CYCGRG 1 cut(s) 1117
Bsp119I TTCGAA 1 cut(s) 954
Bsp120I GGGCCC 1 cut(s) 1098
Bsp1286I GDGCHC 7 cut(s) 228, 250, 264, 1102, 1651, 1905, 2048
Bsp143I GATC 8 cut(s) 16, 802, 856, 1392, 1766, 2002, 2278, 2293
Bsp1720I GCTNAGC 1 cut(s) 1942
BspACI CCGC 8 cut(s) 95, 129, 241, 420, 850, 921, 1224, 2138
BspANI GGCC 6 cut(s) 776, 920, 1028, 1100, 1431, 1782
BspCNI CTCAG 3 cut(s) 400, 1852, 1955
BspDI ATCGAT 1 cut(s) 1991
BspFNI CGCG 1 cut(s) 291
BspLI GGNNCC 3 cut(s) 756, 1100, 1830
BspMAI CTGCAG 2 cut(s) 412, 1672
BspMI ACCTGC 1 cut(s) 486
BspPI GGATC 4 cut(s) 851, 1400, 2286, 2288
BspT104I TTCGAA 1 cut(s) 954
BsrDI GCAATG 4 cut(s) 111, 1063, 1626, 2237
BsrI ACTGG 4 cut(s) 226, 258, 1506, 1915
BssECI CCNNGG 3 cut(s) 908, 1579, 1632
BssMI GATC 8 cut(s) 16, 802, 856, 1392, 1766, 2002, 2278, 2293
BssT1I CCWWGG 2 cut(s) 1579, 1632
Bst2UI CCWGG 3 cut(s) 695, 740, 847
Bst4CI ACNGT 7 cut(s) 12, 560, 783, 810, 935, 1363, 1801
Bst6I CTCTTC 1 cut(s) 1587
BstAPI GCANNNNNTGC 1 cut(s) 1745
BstBI TTCGAA 1 cut(s) 954
BstC8I GCNNGC 5 cut(s) 246, 284, 354, 425, 429
BstDEI CTNAG 4 cut(s) 387, 1513, 1860, 1942
BstDSI CCRYGG 1 cut(s) 908
BstF5I GGATG 3 cut(s) 141, 1390, 2270
BstFNI CGCG 1 cut(s) 291
BstHHI GCGC 1 cut(s) 1620
BstKTI GATC 8 cut(s) 19, 805, 859, 1395, 1769, 2005, 2281, 2296
BstMAI GTCTC 2 cut(s) 1511, 1689
BstMBI GATC 8 cut(s) 16, 802, 856, 1392, 1766, 2002, 2278, 2293
BstMWI GCNNNNNNNGC 9 cut(s) 74, 83, 238, 288, 297, 740, 948, 1745, 2078
BstNI CCWGG 3 cut(s) 695, 740, 847
BstSCI CCNGG 6 cut(s) 693, 702, 738, 845, 942, 1830
BstSFI CTRYAG 4 cut(s) 408, 630, 1668, 1876
BstSLI GKGCMC 3 cut(s) 228, 250, 1102
BstUI CGCG 1 cut(s) 291
BstV1I GCAGC 5 cut(s) 86, 530, 1496, 1682, 1960
BstV2I GAAGAC 1 cut(s) 29
Bsu15I ATCGAT 1 cut(s) 1991
BsuI GTATCC 1 cut(s) 1154
BsuRI GGCC 6 cut(s) 776, 920, 1028, 1100, 1431, 1782
BsuTUI ATCGAT 1 cut(s) 1991
BtgI CCRYGG 1 cut(s) 908
BtgZI GCGATG 2 cut(s) 561, 758
BtsCI GGATG 3 cut(s) 141, 1390, 2270
BtsI GCAGTG 3 cut(s) 405, 417, 937
BtsIMutI CAGTG 3 cut(s) 405, 417, 937
BveI ACCTGC 1 cut(s) 486
Cac8I GCNNGC 5 cut(s) 246, 284, 354, 425, 429
CfoI GCGC 1 cut(s) 1620
Cfr13I GGNCC 7 cut(s) 164, 498, 754, 774, 1098, 1099, 1828
ClaI ATCGAT 1 cut(s) 1991
Csp6I GTAC 8 cut(s) 639, 1006, 1060, 1086, 1359, 1657, 1732, 1892
CviAII CATG 7 cut(s) 25, 827, 854, 986, 1608, 1808, 2340
CviQI GTAC 8 cut(s) 639, 1006, 1060, 1086, 1359, 1657, 1732, 1892
DdeI CTNAG 4 cut(s) 387, 1513, 1860, 1942
DpnI GATC 8 cut(s) 18, 804, 858, 1394, 1768, 2004, 2280, 2295
DpnII GATC 8 cut(s) 16, 802, 856, 1392, 1766, 2002, 2278, 2293
DriI GACNNNNNGTC 1 cut(s) 1702
EaeI YGGCCR 2 cut(s) 918, 1026
Eam1104I CTCTTC 1 cut(s) 1587
Eam1105I GACNNNNNGTC 1 cut(s) 1702
EarI CTCTTC 1 cut(s) 1587
Ecl136II GAGCTC 1 cut(s) 1903
Eco130I CCWWGG 2 cut(s) 1579, 1632
Eco24I GRGCYC 3 cut(s) 1102, 1905, 2048
Eco47I GGWCC 4 cut(s) 164, 498, 754, 1828
Eco53kI GAGCTC 1 cut(s) 1903
Eco57I CTGAAG 1 cut(s) 1542
Eco88I CYCGRG 1 cut(s) 1117
EcoICRI GAGCTC 1 cut(s) 1903
EcoO109I RGGNCCY 2 cut(s) 754, 1099
EcoRI GAATTC 2 cut(s) 1335, 1544
EcoRII CCWGG 3 cut(s) 693, 738, 845
EcoT14I CCWWGG 2 cut(s) 1579, 1632
EcoT38I GRGCYC 3 cut(s) 1102, 1905, 2048
ErhI CCWWGG 2 cut(s) 1579, 1632
FaeI CATG 7 cut(s) 28, 830, 857, 989, 1611, 1811, 2343
FalI AAGNNNNNCTT 6 cut(s) 221, 253, 1419, 1451, 1515, 1547
FaqI GGGAC 1 cut(s) 740
FatI CATG 7 cut(s) 24, 826, 853, 985, 1607, 1807, 2339
FauI CCCGC 1 cut(s) 102
FauNDI CATATG 1 cut(s) 915
FblI GTMKAC 2 cut(s) 218, 1706
Fnu4HI GCNGC 9 cut(s) 75, 242, 421, 544, 851, 921, 1510, 1671, 1974
FokI GGATG 3 cut(s) 128, 1397, 2277
FriOI GRGCYC 3 cut(s) 1102, 1905, 2048
Fsp4HI GCNGC 9 cut(s) 75, 242, 421, 544, 851, 921, 1510, 1671, 1974
FspBI CTAG 3 cut(s) 767, 816, 1340
GlaI GCGC 1 cut(s) 1619
GluI GCNGC 9 cut(s) 75, 242, 421, 544, 851, 921, 1510, 1671, 1974
GsaI CCCAGC 1 cut(s) 1160
GsuI CTGGAG 2 cut(s) 275, 1932
HaeIII GGCC 6 cut(s) 776, 920, 1028, 1100, 1431, 1782
HapII CCGG 4 cut(s) 703, 944, 1029, 1832
HhaI GCGC 1 cut(s) 1620
Hin1II CATG 7 cut(s) 28, 830, 857, 989, 1611, 1811, 2343
Hin6I GCGC 1 cut(s) 1618
HinP1I GCGC 1 cut(s) 1618
HincII GTYRAC 4 cut(s) 295, 700, 1264, 1380
HindII GTYRAC 4 cut(s) 295, 700, 1264, 1380
HindIII AAGCTT 1 cut(s) 370
HinfI GANTC 4 cut(s) 1167, 1275, 1462, 2110
HpaI GTTAAC 2 cut(s) 295, 1264
HpaII CCGG 4 cut(s) 703, 944, 1029, 1832
HphI GGTGA 7 cut(s) 335, 589, 842, 897, 1268, 1781, 2300
Hpy166II GTNNAC 9 cut(s) 219, 295, 700, 813, 1045, 1264, 1366, 1380, 1707
Hpy188I TCNGA 3 cut(s) 390, 1441, 2050
Hpy188III TCNNGA 5 cut(s) 81, 729, 1764, 1906, 2282
Hpy8I GTNNAC 9 cut(s) 219, 295, 700, 813, 1045, 1264, 1366, 1380, 1707
HpyAV CCTTC 7 cut(s) 322, 745, 941, 950, 1421, 2032, 2100
HpyCH4III ACNGT 7 cut(s) 12, 560, 783, 810, 935, 1363, 1801
HpyCH4IV ACGT 1 cut(s) 1266
HpyF10VI GCNNNNNNNGC 9 cut(s) 74, 83, 238, 288, 297, 740, 948, 1745, 2078
HpyF3I CTNAG 4 cut(s) 387, 1513, 1860, 1942
HpySE526I ACGT 1 cut(s) 1266
Hsp92II CATG 7 cut(s) 28, 830, 857, 989, 1611, 1811, 2343
HspAI GCGC 1 cut(s) 1618
KspAI GTTAAC 2 cut(s) 295, 1264
Kzo9I GATC 8 cut(s) 16, 802, 856, 1392, 1766, 2002, 2278, 2293
LmnI GCTCC 1 cut(s) 1073
Lsp1109I GCAGC 5 cut(s) 86, 530, 1496, 1682, 1960
LweI GCATC 5 cut(s) 86, 150, 632, 932, 2014
MaeI CTAG 3 cut(s) 767, 816, 1340
MaeII ACGT 1 cut(s) 1266
MaeIII GTNAC 9 cut(s) 304, 341, 436, 469, 595, 796, 935, 1933, 2131
MalI GATC 8 cut(s) 18, 804, 858, 1394, 1768, 2004, 2280, 2295
MboI GATC 8 cut(s) 16, 802, 856, 1392, 1766, 2002, 2278, 2293
MboII GAAGA 6 cut(s) 29, 962, 1604, 2012, 2097, 2207
MfeI CAATTG 2 cut(s) 175, 1770
MhlI GDGCHC 7 cut(s) 228, 250, 264, 1102, 1651, 1905, 2048
MlyI GAGTC 1 cut(s) 1161
MmeI TCCRAC 4 cut(s) 677, 884, 2124, 2321
MroXI GAANNNNTTC 4 cut(s) 841, 1208, 1596, 1839
MseI TTAA 9 cut(s) 185, 294, 555, 1104, 1191, 1263, 1323, 1494, 1701
MslI CAYNNNNRTG 3 cut(s) 104, 410, 1485
MspA1I CMGCKG 1 cut(s) 2138
MspI CCGG 4 cut(s) 703, 944, 1029, 1832
MspR9I CCNGG 6 cut(s) 695, 704, 740, 847, 944, 1832
MunI CAATTG 2 cut(s) 175, 1770
Mva1269I GAATGC 1 cut(s) 1004
MvaI CCWGG 3 cut(s) 695, 740, 847
MvnI CGCG 1 cut(s) 291
MwoI GCNNNNNNNGC 9 cut(s) 74, 83, 238, 288, 297, 740, 948, 1745, 2078
NciI CCSGG 3 cut(s) 704, 944, 1832
NdeI CATATG 1 cut(s) 915
NdeII GATC 8 cut(s) 16, 802, 856, 1392, 1766, 2002, 2278, 2293
NlaIII CATG 7 cut(s) 28, 830, 857, 989, 1611, 1811, 2343
NlaIV GGNNCC 3 cut(s) 756, 1100, 1830
NmuCI GTSAC 6 cut(s) 304, 341, 436, 595, 935, 2131
NspV TTCGAA 1 cut(s) 954
OliI CACNNNNGTG 1 cut(s) 410
PctI GAATGC 1 cut(s) 1004
PdmI GAANNNNTTC 4 cut(s) 841, 1208, 1596, 1839
PfeI GAWTC 3 cut(s) 1275, 1462, 2110
PflMI CCANNNNNTGG 2 cut(s) 352, 745
PkrI GCNGC 9 cut(s) 76, 243, 422, 545, 852, 922, 1511, 1672, 1975
PleI GAGTC 1 cut(s) 1161
PpsI GAGTC 1 cut(s) 1161
PpuMI RGGWCCY 1 cut(s) 754
Psp124BI GAGCTC 1 cut(s) 1905
Psp1406I AACGTT 1 cut(s) 1266
Psp5II RGGWCCY 1 cut(s) 754
Psp6I CCWGG 3 cut(s) 693, 738, 845
PspFI CCCAGC 1 cut(s) 1156
PspGI CCWGG 3 cut(s) 693, 738, 845
PspN4I GGNNCC 3 cut(s) 756, 1100, 1830
PspOMI GGGCCC 1 cut(s) 1098
PspPI GGNCC 7 cut(s) 164, 498, 754, 774, 1098, 1099, 1828
PspPPI RGGWCCY 1 cut(s) 754
PstI CTGCAG 2 cut(s) 412, 1672
RsaI GTAC 8 cut(s) 640, 1007, 1061, 1087, 1360, 1658, 1733, 1893
RsaNI GTAC 8 cut(s) 639, 1006, 1060, 1086, 1359, 1657, 1732, 1892
RseI CAYNNNNRTG 3 cut(s) 104, 410, 1485
SacI GAGCTC 1 cut(s) 1905
SaqAI TTAA 9 cut(s) 185, 294, 555, 1104, 1191, 1263, 1323, 1494, 1701
SatI GCNGC 9 cut(s) 75, 242, 421, 544, 851, 921, 1510, 1671, 1974
Sau3AI GATC 8 cut(s) 16, 802, 856, 1392, 1766, 2002, 2278, 2293
Sau96I GGNCC 7 cut(s) 164, 498, 754, 774, 1098, 1099, 1828
SchI GAGTC 1 cut(s) 1161
ScrFI CCNGG 6 cut(s) 695, 704, 740, 847, 944, 1832
SduI GDGCHC 7 cut(s) 228, 250, 264, 1102, 1651, 1905, 2048
SfaNI GCATC 5 cut(s) 86, 150, 632, 932, 2014
SfcI CTRYAG 4 cut(s) 408, 630, 1668, 1876
SfuI TTCGAA 1 cut(s) 954
SinI GGWCC 4 cut(s) 164, 498, 754, 1828
SmiMI CAYNNNNRTG 3 cut(s) 104, 410, 1485
SmlI CTYRAG 1 cut(s) 1091
SmoI CTYRAG 1 cut(s) 1091
SsiI CCGC 8 cut(s) 95, 129, 241, 420, 850, 921, 1224, 2138
SspI AATATT 1 cut(s) 1134
SspMI CTAG 3 cut(s) 767, 816, 1340
SstI GAGCTC 1 cut(s) 1905
StyD4I CCNGG 6 cut(s) 693, 702, 738, 845, 942, 1830
StyI CCWWGG 2 cut(s) 1579, 1632
TaaI ACNGT 7 cut(s) 12, 560, 783, 810, 935, 1363, 1801
TaiI ACGT 1 cut(s) 1269
TaqI TCGA 8 cut(s) 879, 954, 973, 1763, 1991, 2113, 2211, 2313
TaqII GACCGA 1 cut(s) 1833
TauI GCSGC 4 cut(s) 244, 423, 853, 923
TfiI GAWTC 3 cut(s) 1275, 1462, 2110
Tru1I TTAA 9 cut(s) 185, 294, 555, 1104, 1191, 1263, 1323, 1494, 1701
Tru9I TTAA 9 cut(s) 185, 294, 555, 1104, 1191, 1263, 1323, 1494, 1701
TscAI CASTG 3 cut(s) 412, 417, 944
TseFI GTSAC 6 cut(s) 304, 341, 436, 595, 935, 2131
TseI GCWGC 5 cut(s) 74, 543, 1509, 1670, 1973
Tsp45I GTSAC 6 cut(s) 304, 341, 436, 595, 935, 2131
TspGWI ACGGA 4 cut(s) 583, 671, 1060, 1397
TspRI CASTG 3 cut(s) 412, 417, 944
Van91I CCANNNNNTGG 2 cut(s) 352, 745
VpaK11BI GGWCC 4 cut(s) 164, 498, 754, 1828
XapI RAATTY 7 cut(s) 334, 358, 1335, 1544, 1638, 2095, 2204
XcmI CCANNNNNNNNNTGG 1 cut(s) 1717
XmiI GTMKAC 2 cut(s) 218, 1706
XmnI GAANNNNTTC 4 cut(s) 841, 1208, 1596, 1839
XspI CTAG 3 cut(s) 767, 816, 1340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.