Rw1G013520

Wall-associated receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000052
Physical Location & Seq
Reverse (-)
30266404 .. 30267693
1290 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G013520.1

Sequence Viewer

Length: 1290 bp
ATGGTCCTCATTAAAAGGGCTTCCCAAGTTCAAAAGCCTCTCTTAATTTCATTGAGGTATTCAGGTACTGGCAGCAGTCTTGGACTAATACTTCTAGCCATTGCTGCATGGTGGTTGGTCCAAGTCATAAAGAAAAGGAAAAACAAAAAACGAAAGGAGAAGTTTTTTAAACAAAATGGTGGTTTAGTATTGGAGCAACAATTATCTTCTGGTGATCAAGCTAATGTTGAAAAAATTAAGTTGTTCAATTCAAGGGAGCTGGAGAAAGCCACGGACCAGTTTAGCATAGATAGAATTCTTGGCCAGGGTGGCCAAGGTACTGTTTACAAAGGAATGTTGATGGATGGACAAACTGTTGCTGTCAAAAAGTCTAAAATAGTTAACGGAGGCGAAGTTCAACAGTTCATTAATGAAATTGTGATTCTTTCACAAATTAACCACAGAAATGTGGTTAAACTATTGGGTTGTTGTTTGGAGACCGAAATTCCCCTCTTGGTCTATGAATTTCTACCAAATGGAACACTTTCTCAGTACATTCATGACCAAGATGAGGAGTTTCCTCTTACATGGGGAACGCGATTGCGAGTGTCTACAGAAGTTGCTGGAGCTCTTTCATATTTACACTCGGCCGCTTCTATTCCTATTTACCATCGGGACATCAAGTCCACAAACATACTCTTGGATGCCAAGTATAGAGCAAAAATTGCAGATTTTGGGACTTCCAGATCCATTTCCATTGACCAGACACACCTCACCACACTGGTACATGGAACATTTGGTTATTTGGACCCAGAGTACTTTCAATCAGGCCAATTTACAGAAAAGAGTGATGTTTACAGCTTCGGTGTGGTCCTTGCTGAGCTCTTGACTGGACAAAAACCAGTTTTCATGATGAGGTCGCAAGAAAGTAGAAGCCTAGCAACTCATTTTCTCCTTTCCATGGAGCAGAATCGTTTGTTTGATATTCTTGACTCTCAAGTTATGAAAGATGGTGGCAAAGAAGACATTATAGCAGTTGCTAACCTTGCACAAAATTGCTTAAACTTGGATGGAAGGAAACGTCCTACTATGAAAGAACTAGCGGCGGAATTGGAGGGAATTCGATTGGCAGTCAAAGATGTTGATCATGTTCAACAAAATTTGGTAGAGGAAGGAGATGTCAGAACTCATGAAATAACCACCGAGACTTATTGCAATGTTATTTCGACATCACCTGGTCCTTTTACAAATGGTAGTACTGCAGGTTCTTCATTTGATGTACAGCCACTAATGTTTTATAATACACAGTAG

Protein Analysis

429

Amino Acids

47.9

Weight (kDa)

7.12

Isoelectric Point (pI)

32.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 95 - 361 5.4e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 96 - 364 2.4e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1278
Acc36I ACCTGC 1 cut(s) 1232
AccI GTMKAC 1 cut(s) 590
AccII CGCG 1 cut(s) 577
AciI CCGC 3 cut(s) 630, 1082, 1085
AclWI GGATC 1 cut(s) 720
AcoI YGGCCR 3 cut(s) 301, 310, 627
AcsI RAATTY 5 cut(s) 294, 483, 503, 1098, 1138
AfaI GTAC 7 cut(s) 67, 319, 533, 765, 797, 1237, 1260
AfiI CCNNNNNNNGG 2 cut(s) 550, 940
AgsI TTSAA 7 cut(s) 32, 230, 247, 252, 398, 803, 1133
AhdI GACNNNNNGTC 1 cut(s) 661
AjnI CCWGG 2 cut(s) 303, 1213
AloI GAACNNNNNNTCC 2 cut(s) 378, 410
AluBI AGCT 5 cut(s) 221, 259, 608, 840, 862
AluI AGCT 5 cut(s) 221, 259, 608, 840, 862
Alw21I GWGCWC 2 cut(s) 610, 864
Alw26I GTCTC 2 cut(s) 470, 1178
AlwI GGATC 1 cut(s) 720
AlwNI CAGNNNCTG 1 cut(s) 68
AoxI GGCC 4 cut(s) 301, 310, 627, 808
ApeKI GCWGC 2 cut(s) 72, 104
ApoI RAATTY 5 cut(s) 294, 483, 503, 1098, 1138
AseI ATTAAT 1 cut(s) 408
Asp700I GAANNNNTTC 1 cut(s) 523
AspS9I GGNCC 6 cut(s) 4, 118, 274, 787, 850, 1217
AsuHPI GGTGA 3 cut(s) 224, 745, 1203
AvaII GGWCC 6 cut(s) 4, 118, 274, 787, 850, 1217
BalI TGGCCA 2 cut(s) 303, 312
BanII GRGCYC 2 cut(s) 610, 864
BbsI GAAGAC 1 cut(s) 1008
Bbv12I GWGCWC 2 cut(s) 610, 864
BbvI GCAGC 2 cut(s) 84, 91
BccI CCATC 5 cut(s) 334, 338, 657, 983, 1043
BciT130I CCWGG 2 cut(s) 305, 1215
BclI TGATCA 2 cut(s) 214, 1123
BcoDI GTCTC 2 cut(s) 470, 1178
BfaI CTAG 3 cut(s) 95, 917, 1079
BfmI CTRYAG 2 cut(s) 591, 1239
BfuAI ACCTGC 1 cut(s) 1232
BglI GCCNNNNNGGC 1 cut(s) 309
BisI GCNGC 4 cut(s) 73, 105, 630, 1083
BlpI GCTNAGC 1 cut(s) 858
BlsI GCNGC 4 cut(s) 74, 106, 631, 1084
BmcAI AGTACT 2 cut(s) 797, 1237
Bme1390I CCNGG 2 cut(s) 305, 1215
Bme18I GGWCC 6 cut(s) 4, 118, 274, 787, 850, 1217
BmeRI GACNNNNNGTC 1 cut(s) 661
BmgT120I GGNCC 6 cut(s) 4, 118, 274, 787, 850, 1217
BmiI GGNNCC 1 cut(s) 789
BmrFI CCNGG 2 cut(s) 305, 1215
BmsI GCATC 1 cut(s) 673
BpiI GAAGAC 1 cut(s) 1008
BpmI CTGGAG 2 cut(s) 281, 624
Bpu1102I GCTNAGC 1 cut(s) 858
BpuEI CTTGAG 1 cut(s) 960
BsaBI GATNNNNATC 1 cut(s) 1122
BsaI GGTCTC 1 cut(s) 470
BsaJI CCNNGG 4 cut(s) 270, 304, 313, 939
BsaXI ACNNNNNCTCC 2 cut(s) 378, 408
Bsc4I CCNNNNNNNGG 2 cut(s) 550, 940
Bse1I ACTGG 5 cut(s) 73, 277, 765, 874, 881
Bse3DI GCAATG 2 cut(s) 99, 1201
Bse8I GATNNNNATC 1 cut(s) 1122
BseBI CCWGG 2 cut(s) 305, 1215
BseDI CCNNGG 4 cut(s) 270, 304, 313, 939
BseGI GGATG 3 cut(s) 349, 688, 1054
BseJI GATNNNNATC 1 cut(s) 1122
BseLI CCNNNNNNNGG 2 cut(s) 550, 940
BseMI GCAATG 2 cut(s) 99, 1201
BseMII CTCAG 2 cut(s) 542, 849
BseNI ACTGG 5 cut(s) 73, 277, 765, 874, 881
BseRI GAGGAG 1 cut(s) 566
BseX3I CGGCCG 1 cut(s) 627
BseXI GCAGC 2 cut(s) 84, 91
Bsh1236I CGCG 1 cut(s) 577
Bsh1285I CGRYCG 1 cut(s) 630
BshFI GGCC 4 cut(s) 303, 312, 629, 810
BsiEI CGRYCG 1 cut(s) 630
BsiHKAI GWGCWC 2 cut(s) 610, 864
BslFI GGGAC 2 cut(s) 668, 730
BslI CCNNNNNNNGG 2 cut(s) 550, 940
BsmAI GTCTC 2 cut(s) 470, 1178
BsmFI GGGAC 2 cut(s) 668, 730
BsnI GGCC 4 cut(s) 303, 312, 629, 810
Bso31I GGTCTC 1 cut(s) 470
Bsp1286I GDGCHC 2 cut(s) 610, 864
Bsp1407I TGTACA 1 cut(s) 1258
Bsp143I GATC 3 cut(s) 214, 725, 1123
Bsp1720I GCTNAGC 1 cut(s) 858
Bsp19I CCATGG 1 cut(s) 939
BspACI CCGC 3 cut(s) 630, 1082, 1085
BspANI GGCC 4 cut(s) 303, 312, 629, 810
BspCNI CTCAG 2 cut(s) 541, 850
BspFNI CGCG 1 cut(s) 577
BspHI TCATGA 3 cut(s) 538, 888, 1168
BspLI GGNNCC 1 cut(s) 789
BspMAI CTGCAG 1 cut(s) 1243
BspMI ACCTGC 1 cut(s) 1232
BspPI GGATC 1 cut(s) 720
BspTNI GGTCTC 1 cut(s) 470
BsrDI GCAATG 2 cut(s) 99, 1201
BsrGI TGTACA 1 cut(s) 1258
BsrI ACTGG 5 cut(s) 73, 277, 765, 874, 881
BssECI CCNNGG 4 cut(s) 270, 304, 313, 939
BssMI GATC 3 cut(s) 214, 725, 1123
BssT1I CCWWGG 2 cut(s) 313, 939
Bst2UI CCWGG 2 cut(s) 305, 1215
Bst4CI ACNGT 4 cut(s) 322, 355, 402, 1287
BstAPI GCANNNNNTGC 1 cut(s) 704
BstAUI TGTACA 1 cut(s) 1258
BstDEI CTNAG 2 cut(s) 528, 858
BstDSI CCRYGG 2 cut(s) 270, 939
BstF5I GGATG 3 cut(s) 349, 688, 1054
BstFNI CGCG 1 cut(s) 577
BstKTI GATC 3 cut(s) 217, 728, 1126
BstMAI GTCTC 2 cut(s) 470, 1178
BstMBI GATC 3 cut(s) 214, 725, 1123
BstMCI CGRYCG 1 cut(s) 630
BstMWI GCNNNNNNNGC 4 cut(s) 104, 309, 704, 1025
BstNI CCWGG 2 cut(s) 305, 1215
BstSCI CCNGG 2 cut(s) 303, 1213
BstSFI CTRYAG 2 cut(s) 591, 1239
BstUI CGCG 1 cut(s) 577
BstV1I GCAGC 2 cut(s) 84, 91
BstV2I GAAGAC 1 cut(s) 1008
BstX2I RGATCY 1 cut(s) 725
BstYI RGATCY 1 cut(s) 725
BstZI CGGCCG 1 cut(s) 627
BsuRI GGCC 4 cut(s) 303, 312, 629, 810
BtgI CCRYGG 2 cut(s) 270, 939
BtsCI GGATG 3 cut(s) 349, 688, 1054
BtsIMutI CAGTG 1 cut(s) 758
BveI ACCTGC 1 cut(s) 1232
CaiI CAGNNNCTG 1 cut(s) 68
CciI TCATGA 3 cut(s) 538, 888, 1168
Cfr13I GGNCC 6 cut(s) 4, 118, 274, 787, 850, 1217
CsiI ACCWGGT 1 cut(s) 1213
Csp6I GTAC 7 cut(s) 66, 318, 532, 764, 796, 1236, 1259
CviAII CATG 8 cut(s) 108, 539, 567, 767, 889, 940, 1127, 1169
CviQI GTAC 7 cut(s) 66, 318, 532, 764, 796, 1236, 1259
DdeI CTNAG 2 cut(s) 528, 858
DpnI GATC 3 cut(s) 216, 727, 1125
DpnII GATC 3 cut(s) 214, 725, 1123
DraI TTTAAA 1 cut(s) 169
DriI GACNNNNNGTC 1 cut(s) 661
EaeI YGGCCR 3 cut(s) 301, 310, 627
EagI CGGCCG 1 cut(s) 627
Eam1105I GACNNNNNGTC 1 cut(s) 661
EciI GGCGGA 1 cut(s) 1100
Ecl136II GAGCTC 2 cut(s) 608, 862
EclXI CGGCCG 1 cut(s) 627
Eco130I CCWWGG 2 cut(s) 313, 939
Eco24I GRGCYC 2 cut(s) 610, 864
Eco31I GGTCTC 1 cut(s) 470
Eco47I GGWCC 6 cut(s) 4, 118, 274, 787, 850, 1217
Eco52I CGGCCG 1 cut(s) 627
Eco53kI GAGCTC 2 cut(s) 608, 862
EcoICRI GAGCTC 2 cut(s) 608, 862
EcoRI GAATTC 2 cut(s) 294, 1098
EcoRII CCWGG 2 cut(s) 303, 1213
EcoT14I CCWWGG 2 cut(s) 313, 939
EcoT38I GRGCYC 2 cut(s) 610, 864
ErhI CCWWGG 2 cut(s) 313, 939
FaeI CATG 8 cut(s) 111, 542, 570, 770, 892, 943, 1130, 1172
FalI AAGNNNNNCTT 2 cut(s) 26, 58
FaqI GGGAC 2 cut(s) 668, 730
FatI CATG 8 cut(s) 107, 538, 566, 766, 888, 939, 1126, 1168
FbaI TGATCA 2 cut(s) 214, 1123
FblI GTMKAC 1 cut(s) 590
Fnu4HI GCNGC 4 cut(s) 73, 105, 630, 1083
FokI GGATG 3 cut(s) 356, 695, 1061
FriOI GRGCYC 2 cut(s) 610, 864
Fsp4HI GCNGC 4 cut(s) 73, 105, 630, 1083
FspBI CTAG 3 cut(s) 95, 917, 1079
GluI GCNGC 4 cut(s) 73, 105, 630, 1083
GsuI CTGGAG 2 cut(s) 281, 624
HaeIII GGCC 4 cut(s) 303, 312, 629, 810
Hin1II CATG 8 cut(s) 111, 542, 570, 770, 892, 943, 1130, 1172
HincII GTYRAC 1 cut(s) 382
HindII GTYRAC 1 cut(s) 382
HinfI GANTC 3 cut(s) 421, 949, 971
HpaI GTTAAC 1 cut(s) 382
HphI GGTGA 3 cut(s) 224, 745, 1203
Hpy166II GTNNAC 5 cut(s) 325, 382, 591, 666, 835
Hpy188I TCNGA 1 cut(s) 1163
Hpy188III TCNNGA 7 cut(s) 539, 653, 723, 865, 889, 968, 1169
Hpy8I GTNNAC 5 cut(s) 325, 382, 591, 666, 835
HpyAV CCTTC 2 cut(s) 1047, 1145
HpyCH4III ACNGT 4 cut(s) 322, 355, 402, 1287
HpyCH4IV ACGT 1 cut(s) 1060
HpyCH4V TGCA 5 cut(s) 107, 707, 1028, 1194, 1241
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 309, 704, 1025
HpyF3I CTNAG 2 cut(s) 528, 858
HpySE526I ACGT 1 cut(s) 1060
Hsp92II CATG 8 cut(s) 111, 542, 570, 770, 892, 943, 1130, 1172
Ksp22I TGATCA 2 cut(s) 214, 1123
KspAI GTTAAC 1 cut(s) 382
Kzo9I GATC 3 cut(s) 214, 725, 1123
LmnI GCTCC 4 cut(s) 193, 256, 605, 943
Lsp1109I GCAGC 2 cut(s) 84, 91
LweI GCATC 1 cut(s) 673
MabI ACCWGGT 1 cut(s) 1213
MaeI CTAG 3 cut(s) 95, 917, 1079
MaeII ACGT 1 cut(s) 1060
MalI GATC 3 cut(s) 216, 727, 1125
MboI GATC 3 cut(s) 214, 725, 1123
MboII GAAGA 3 cut(s) 198, 1013, 1239
MflI RGATCY 1 cut(s) 725
MhlI GDGCHC 2 cut(s) 610, 864
MlsI TGGCCA 2 cut(s) 303, 312
MluNI TGGCCA 2 cut(s) 303, 312
MlyI GAGTC 1 cut(s) 965
Mox20I TGGCCA 2 cut(s) 303, 312
MroXI GAANNNNTTC 1 cut(s) 523
MscI TGGCCA 2 cut(s) 303, 312
MseI TTAA 9 cut(s) 12, 44, 168, 237, 381, 408, 435, 453, 1040
MslI CAYNNNNRTG 1 cut(s) 444
Msp20I TGGCCA 2 cut(s) 303, 312
MspR9I CCNGG 2 cut(s) 305, 1215
MvaI CCWGG 2 cut(s) 305, 1215
MvnI CGCG 1 cut(s) 577
MwoI GCNNNNNNNGC 4 cut(s) 104, 309, 704, 1025
NcoI CCATGG 1 cut(s) 939
NdeII GATC 3 cut(s) 214, 725, 1123
NlaIII CATG 8 cut(s) 111, 542, 570, 770, 892, 943, 1130, 1172
NlaIV GGNNCC 1 cut(s) 789
NmeAIII GCCGAG 1 cut(s) 605
PagI TCATGA 3 cut(s) 538, 888, 1168
PdmI GAANNNNTTC 1 cut(s) 523
PfeI GAWTC 2 cut(s) 421, 949
PkrI GCNGC 4 cut(s) 74, 106, 631, 1084
PleI GAGTC 1 cut(s) 965
PpsI GAGTC 1 cut(s) 965
PshBI ATTAAT 1 cut(s) 408
PsiI TTATAA 1 cut(s) 1278
Psp124BI GAGCTC 2 cut(s) 610, 864
Psp6I CCWGG 2 cut(s) 303, 1213
PspGI CCWGG 2 cut(s) 303, 1213
PspN4I GGNNCC 1 cut(s) 789
PspPI GGNCC 6 cut(s) 4, 118, 274, 787, 850, 1217
PsrI GAACNNNNNNTAC 2 cut(s) 1228, 1260
PstI CTGCAG 1 cut(s) 1243
PstNI CAGNNNCTG 1 cut(s) 68
PsuI RGATCY 1 cut(s) 725
RsaI GTAC 7 cut(s) 67, 319, 533, 765, 797, 1237, 1260
RsaNI GTAC 7 cut(s) 66, 318, 532, 764, 796, 1236, 1259
RseI CAYNNNNRTG 1 cut(s) 444
SacI GAGCTC 2 cut(s) 610, 864
SaqAI TTAA 9 cut(s) 12, 44, 168, 237, 381, 408, 435, 453, 1040
SatI GCNGC 4 cut(s) 73, 105, 630, 1083
Sau3AI GATC 3 cut(s) 214, 725, 1123
Sau96I GGNCC 6 cut(s) 4, 118, 274, 787, 850, 1217
ScaI AGTACT 2 cut(s) 797, 1237
SchI GAGTC 1 cut(s) 965
ScrFI CCNGG 2 cut(s) 305, 1215
SduI GDGCHC 2 cut(s) 610, 864
SexAI ACCWGGT 1 cut(s) 1213
SfaNI GCATC 1 cut(s) 673
SfcI CTRYAG 2 cut(s) 591, 1239
SfiI GGCCNNNNNGGCC 1 cut(s) 309
SinI GGWCC 6 cut(s) 4, 118, 274, 787, 850, 1217
SmiMI CAYNNNNRTG 1 cut(s) 444
SmlI CTYRAG 1 cut(s) 975
SmoI CTYRAG 1 cut(s) 975
SsiI CCGC 3 cut(s) 630, 1082, 1085
SspMI CTAG 3 cut(s) 95, 917, 1079
SstI GAGCTC 2 cut(s) 610, 864
StyD4I CCNGG 2 cut(s) 303, 1213
StyI CCWWGG 2 cut(s) 313, 939
TaaI ACNGT 4 cut(s) 322, 355, 402, 1287
TaiI ACGT 1 cut(s) 1063
TaqI TCGA 2 cut(s) 1102, 1205
TaqII GACCGA 1 cut(s) 494
TatI WGTACW 4 cut(s) 531, 795, 1235, 1258
TauI GCSGC 2 cut(s) 632, 1085
TfiI GAWTC 2 cut(s) 421, 949
Tru1I TTAA 9 cut(s) 12, 44, 168, 237, 381, 408, 435, 453, 1040
Tru9I TTAA 9 cut(s) 12, 44, 168, 237, 381, 408, 435, 453, 1040
TscAI CASTG 1 cut(s) 765
TseI GCWGC 2 cut(s) 72, 104
TspGWI ACGGA 2 cut(s) 287, 399
TspRI CASTG 1 cut(s) 765
VpaK11BI GGWCC 6 cut(s) 4, 118, 274, 787, 850, 1217
VspI ATTAAT 1 cut(s) 408
XapI RAATTY 5 cut(s) 294, 483, 503, 1098, 1138
XmiI GTMKAC 1 cut(s) 590
XmnI GAANNNNTTC 1 cut(s) 523
XspI CTAG 3 cut(s) 95, 917, 1079
ZrmI AGTACT 2 cut(s) 797, 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.