FvH4_3g35290

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
30426458 .. 30431587
5130 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g35290.t2

Sequence Viewer

Length: 2196 bp
ATGGTCAGGTACTGGATGGCAGACAAATCCGCTTGGAATTTGCACACAAGGGAAGCAGCAGATGAGTTAGCACCCATGCCGATAGGAAAGCCTGGCTGCAAAACAAACTGCAGTGGCGTTTTGATTCAATACCCTTTCGGAATCGGCCAATCCGGCGGTGAAGATTGCTTCTACGACGTGTGGTTCCAAATCGACTGCAACCAGTCCACCGGGTGGAAGCCAATCTTGAGGCACACTCAAATGGAGATAGGCAACATTACCATTGCTGAAAATGCAGATAGAGTTCAGGTCTATAGCCCTGTCACTTCCTTGTGCCCTAATACTTCATCAAGGCAACCAAGAGATTTCGCCGGCAGCCCTTTCGTCTACTCTCAGAAGTTCAATATATTTACTGCAGTGAGTTGCGGCTTCCTTGCCGTGATTAGCTCCGATGAGTTAATCGTCGGTGGGTGCAGGTCAAGGTGTGGAGAGAACGGCTACAGCGTTGACATGCCATGTGACACTGGTGATAATTGTTGCCAGACTACTATTCCTTCATCTCTCACAGTTATCAGTGCTAGCATACAGAGAGATCCAAATGGAAGCGCACCTGGTGGTGCTGGTTGCAAAGAACGTGCTTTTCTGGTTGACCAAGATTGGTTTAGTGCTACAAGTTACTATGCCATTGAGAACATGAGCAGCGTTCCTGTGGTGCTGGAATGGACTTTAAACAACGATCATGCTACTTCTTCATTTCAACCATTTCAATCTTTCCTAGCAGATACCGATTGGTATTTCACGGATCCAACACCGTTTTGCTCGATTGACCAATCCACAAGCAATCGAACTGGAACCACATTCAGTTGTTACTGCAGTTCTGGCTTTGAAGGAAATCCATACCTTCTCGCGCCTTGTCGTGATATTGATGAATGCGCAATTCGGCCTAGCGTCTGCTCGCCAGGCAGCAAGTGTAAGAACACTCCTGCAATGTATTATTGCGGGGCTGACAGCCATGTTGTGACATGGGTCCTTTCAGGTGTTGGCGGGTGCTTTGGATTGTTATTGTTACTTACTGGTGCATGGTTGACACACAAATACCTTCAGAAAAGGAAAAACAAAAAGCGCAAGGAGTTGTTTTTCAAGAGAAATGGTGGTTTACTACTACAGCAACAATTATCATCCGGTAAAGTTAACGTTGAGAAGATTAAGTTGTTTACATCTGAGGAGTTGGAGAAGTCTACTGACAAATTCAATGTTGATAGAATCCTTGGCCAGGGAGGCCAAGGCACTGTTTACAAAGGCATGCTAGCAGATGGAAGGATCATCGCTATTAAGAAGTCGAAAATGGTCAGTGAAGGCCAACTCTCGGATTTCATCAATGAGGTTGTCATTCTTTCTCAGATTAACCATAGAAATGTAGTTCAGCTATTGGGTTGTTGTTTAGAGAATGAAGTTCCTCTCTTAGTTTATGAGTTCATACCAAATGGTACTCTTTCCAAGTATATCCAAGGTCAGGTGGAAGAATTTCCACTTACATGGAAAATACGATTACGAATTGCAACAGAAATTGCAGGAGCTCTTTTCTACCTACACTCTGCGGCTTCATTTCCCATTTTTCATCGAGATATCAAGTCAACAAACATACTTCTGGATGAAAAATACAGAGCAAAAGTTGCAGATTTTGGAACTTCCAGATCTGTTGGCATTGATCAAACCCACCTGACCACATGTGTACATGGTACGTTTGGTTATATGGACCCAGAATACTTCCATTCAAGTCAATTTACAGAGAAAAGTGATGTCTATAGCTTCGGAGTTGTCCTTGTTGAGCTTTTGACTGGACTAAAACCAGTGTCTGCTGTGACAAAATCACCAGAAGAATTCAGAAATCTTGCCTCACATTTTCTTACTTCAATGCAAGAAGAAAATCTACGCGAAATTCTCGATGCCCGAGTTCTCAAAGAGGGCTCTGAAACAGATATTATGGTTGTTGCTAACCTTGCAAAAAGATGTTTGAATGAGAATGGAAGAAATCGCCCTACAATGAGAGAGGTAACAGCAGAGTTGGAGTCCATCTATATCCCTATGTGCACAGAAAAGGCGTCAAATCCTGATCAACGAGCTAAATCCATTGATAGTTGGGATGGAAGTGAAACAGCAACTGAGATAGCTTCTGATAGGTATGGTGATTATGAGATTGACTTCATAACCACTTAA

Protein Analysis

732

Amino Acids

81.19

Weight (kDa)

5.44

Isoelectric Point (pI)

37.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 38 - 96 9.3e-08 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 415 - 684 3.1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 417 - 687 2.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 913
Acc36I ACCTGC 1 cut(s) 444
AccB7I CCANNNNNTGG 1 cut(s) 213
AccI GTMKAC 2 cut(s) 366, 1217
AccII CGCG 2 cut(s) 887, 1914
AciI CCGC 6 cut(s) 30, 156, 405, 978, 1023, 1577
AclI AACGTT 1 cut(s) 1173
AclWI GGATC 4 cut(s) 566, 776, 789, 1307
AcoI YGGCCR 2 cut(s) 145, 1249
AcsI RAATTY 5 cut(s) 37, 1226, 1502, 1859, 1917
AcuI CTGAAG 1 cut(s) 1064
AcyI GRCGYC 1 cut(s) 2081
AdeI CACNNNGTG 2 cut(s) 213, 593
AfaI GTAC 4 cut(s) 11, 1468, 1713, 1720
AfiI CCNNNNNNNGG 4 cut(s) 213, 1252, 1345, 1492
AflIII ACRYGT 2 cut(s) 177, 1706
AjiI CACGTC 1 cut(s) 178
AjnI CCWGG 4 cut(s) 91, 589, 937, 1251
AluBI AGCT 7 cut(s) 426, 1405, 1556, 1788, 1810, 2102, 2150
AluI AGCT 7 cut(s) 426, 1405, 1556, 1788, 1810, 2102, 2150
Alw21I GWGCWC 2 cut(s) 1558, 2072
Alw44I GTGCAC 1 cut(s) 2068
AlwI GGATC 4 cut(s) 566, 776, 789, 1307
AlwNI CAGNNNCTG 3 cut(s) 12, 1835, 2141
Ama87I CYCGRG 1 cut(s) 1929
AoxI GGCC 5 cut(s) 145, 920, 1249, 1258, 1336
ApaLI GTGCAC 1 cut(s) 2068
ApeKI GCWGC 5 cut(s) 56, 96, 354, 678, 942
ApoI RAATTY 5 cut(s) 37, 1226, 1502, 1859, 1917
Asp700I GAANNNNTTC 1 cut(s) 1503
AspLEI GCGC 4 cut(s) 587, 889, 914, 1104
AspS9I GGNCC 2 cut(s) 1006, 1735
AsuC2I CCSGG 1 cut(s) 211
AsuHPI GGTGA 4 cut(s) 170, 518, 1842, 2177
AsuNHI GCTAGC 2 cut(s) 557, 1285
AvaI CYCGRG 1 cut(s) 1929
AvaII GGWCC 2 cut(s) 1006, 1735
BaeGI GKGCMC 2 cut(s) 317, 2072
BalI TGGCCA 1 cut(s) 1251
BamHI GGATCC 1 cut(s) 781
BanII GRGCYC 2 cut(s) 1558, 1949
BarI GAAGNNNNNNTAC 2 cut(s) 1893, 1925
Bbv12I GWGCWC 2 cut(s) 1558, 2072
BbvI GCAGC 5 cut(s) 68, 83, 366, 690, 954
BccI CCATC 4 cut(s) 10, 1286, 2060, 2117
BceAI ACGGC 2 cut(s) 401, 490
BcgI CGANNNNNNTGC 2 cut(s) 343, 377
BciT130I CCWGG 4 cut(s) 93, 591, 939, 1253
BclI TGATCA 2 cut(s) 1687, 2092
BcnI CCSGG 1 cut(s) 211
BfaI CTAG 4 cut(s) 558, 755, 924, 1286
BfmI CTRYAG 7 cut(s) 109, 292, 393, 478, 850, 1142, 1783
BfuAI ACCTGC 1 cut(s) 444
BglI GCCNNNNNGGC 2 cut(s) 153, 1257
BglII AGATCT 1 cut(s) 1673
BisI GCNGC 7 cut(s) 57, 97, 355, 406, 679, 943, 1578
BlsI GCNGC 7 cut(s) 58, 98, 356, 407, 680, 944, 1579
Bme1390I CCNGG 5 cut(s) 93, 211, 591, 939, 1253
Bme18I GGWCC 2 cut(s) 1006, 1735
BmeT110I CYCGRG 1 cut(s) 1929
BmgBI CACGTC 1 cut(s) 178
BmgT120I GGNCC 2 cut(s) 1006, 1735
BmiI GGNNCC 5 cut(s) 185, 783, 832, 1007, 1737
BmrFI CCNGG 5 cut(s) 93, 211, 591, 939, 1253
BmsI GCATC 1 cut(s) 1915
BmtI GCTAGC 2 cut(s) 561, 1289
BoxI GACNNNNGTC 1 cut(s) 1004
BplI GAGNNNNNCTC 2 cut(s) 220, 252
BpuEI CTTGAG 1 cut(s) 247
BpuMI CCSGG 1 cut(s) 211
BsaHI GRCGYC 1 cut(s) 2081
BsaJI CCNNGG 4 cut(s) 1246, 1252, 1261, 1486
BsaWI WCCGGW 1 cut(s) 1160
Bsc4I CCNNNNNNNGG 4 cut(s) 213, 1252, 1345, 1492
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 7 cut(s) 17, 202, 508, 832, 1057, 1822, 1829
Bse3DI GCAATG 2 cut(s) 261, 972
BseBI CCWGG 4 cut(s) 93, 591, 939, 1253
BseDI CCNNGG 4 cut(s) 1246, 1252, 1261, 1486
BseGI GGATG 4 cut(s) 21, 1157, 1636, 2128
BseLI CCNNNNNNNGG 4 cut(s) 213, 1252, 1345, 1492
BseMI GCAATG 2 cut(s) 261, 972
BseMII CTCAG 4 cut(s) 386, 1191, 1391, 2133
BseNI ACTGG 7 cut(s) 17, 202, 508, 832, 1057, 1822, 1829
BseRI GAGGAG 1 cut(s) 1217
BseSI GKGCMC 2 cut(s) 317, 2072
BseXI GCAGC 5 cut(s) 68, 83, 366, 690, 954
BsgI GTGCAG 1 cut(s) 472
Bsh1236I CGCG 2 cut(s) 887, 1914
BshFI GGCC 5 cut(s) 147, 922, 1251, 1260, 1338
BsiHKAI GWGCWC 2 cut(s) 1558, 2072
BsiHKCI CYCGRG 1 cut(s) 1929
BsiSI CCGG 4 cut(s) 153, 210, 351, 1161
BslI CCNNNNNNNGG 4 cut(s) 213, 1252, 1345, 1492
BsmI GAATGC 1 cut(s) 914
BsnI GGCC 5 cut(s) 147, 922, 1251, 1260, 1338
BsoBI CYCGRG 1 cut(s) 1929
Bsp1286I GDGCHC 4 cut(s) 317, 1558, 1949, 2072
Bsp1407I TGTACA 1 cut(s) 1711
Bsp143I GATC 7 cut(s) 571, 715, 781, 1299, 1673, 1687, 2092
BspACI CCGC 6 cut(s) 30, 156, 405, 978, 1023, 1577
BspANI GGCC 5 cut(s) 147, 922, 1251, 1260, 1338
BspCNI CTCAG 4 cut(s) 385, 1192, 1390, 2134
BspFNI CGCG 2 cut(s) 887, 1914
BspLI GGNNCC 5 cut(s) 185, 783, 832, 1007, 1737
BspMAI CTGCAG 3 cut(s) 113, 397, 854
BspMI ACCTGC 1 cut(s) 444
BspOI GCTAGC 2 cut(s) 561, 1289
BspPI GGATC 4 cut(s) 566, 776, 789, 1307
BsrDI GCAATG 2 cut(s) 261, 972
BsrFI RCCGGY 1 cut(s) 350
BsrGI TGTACA 1 cut(s) 1711
BsrI ACTGG 7 cut(s) 17, 202, 508, 832, 1057, 1822, 1829
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 4 cut(s) 1246, 1252, 1261, 1486
BssMI GATC 7 cut(s) 571, 715, 781, 1299, 1673, 1687, 2092
BssNI GRCGYC 1 cut(s) 2081
BssT1I CCWWGG 3 cut(s) 1246, 1261, 1486
Bst2UI CCWGG 4 cut(s) 93, 591, 939, 1253
Bst4CI ACNGT 3 cut(s) 547, 792, 1270
BstACI GRCGYC 1 cut(s) 2081
BstAPI GCANNNNNTGC 1 cut(s) 1652
BstAUI TGTACA 1 cut(s) 1711
BstC8I GCNNGC 5 cut(s) 352, 559, 935, 1283, 1287
BstDEI CTNAG 5 cut(s) 372, 1200, 1377, 1441, 2142
BstENI CCTNNNNNAGG 1 cut(s) 1250
BstF5I GGATG 4 cut(s) 21, 1157, 1636, 2128
BstFNI CGCG 2 cut(s) 887, 1914
BstHHI GCGC 4 cut(s) 587, 889, 914, 1104
BstKTI GATC 7 cut(s) 574, 718, 784, 1302, 1676, 1690, 2095
BstMBI GATC 7 cut(s) 571, 715, 781, 1299, 1673, 1687, 2092
BstMWI GCNNNNNNNGC 7 cut(s) 153, 272, 858, 939, 1257, 1652, 1979
BstNI CCWGG 4 cut(s) 93, 591, 939, 1253
BstNSI RCATGY 3 cut(s) 493, 1285, 1710
BstPAI GACNNNNGTC 1 cut(s) 1004
BstSCI CCNGG 5 cut(s) 91, 209, 589, 937, 1251
BstSFI CTRYAG 7 cut(s) 109, 292, 393, 478, 850, 1142, 1783
BstSLI GKGCMC 2 cut(s) 317, 2072
BstUI CGCG 2 cut(s) 887, 1914
BstV1I GCAGC 5 cut(s) 68, 83, 366, 690, 954
BstX2I RGATCY 3 cut(s) 571, 781, 1673
BstXI CCANNNNNNTGG 1 cut(s) 1515
BstYI RGATCY 3 cut(s) 571, 781, 1673
BsuRI GGCC 5 cut(s) 147, 922, 1251, 1260, 1338
BtgZI GCGATG 1 cut(s) 1288
BtrI CACGTC 1 cut(s) 178
BtsCI GGATG 4 cut(s) 21, 1157, 1636, 2128
BtsI GCAGTG 2 cut(s) 118, 402
BtsIMutI CAGTG 7 cut(s) 118, 402, 501, 559, 1266, 1336, 1836
BveI ACCTGC 1 cut(s) 444
Cac8I GCNNGC 5 cut(s) 352, 559, 935, 1283, 1287
CaiI CAGNNNCTG 3 cut(s) 12, 1835, 2141
CfoI GCGC 4 cut(s) 587, 889, 914, 1104
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 2 cut(s) 1006, 1735
CseI GACGC 2 cut(s) 916, 2070
CsiI ACCWGGT 1 cut(s) 589
Csp6I GTAC 4 cut(s) 10, 1467, 1712, 1719
CviQI GTAC 4 cut(s) 10, 1467, 1712, 1719
DdeI CTNAG 5 cut(s) 372, 1200, 1377, 1441, 2142
DpnI GATC 7 cut(s) 573, 717, 783, 1301, 1675, 1689, 2094
DpnII GATC 7 cut(s) 571, 715, 781, 1299, 1673, 1687, 2092
DraI TTTAAA 1 cut(s) 708
DraIII CACNNNGTG 2 cut(s) 213, 593
EaeI YGGCCR 2 cut(s) 145, 1249
Ecl136II GAGCTC 1 cut(s) 1556
Eco130I CCWWGG 3 cut(s) 1246, 1261, 1486
Eco24I GRGCYC 2 cut(s) 1558, 1949
Eco32I GATATC 1 cut(s) 1606
Eco47I GGWCC 2 cut(s) 1006, 1735
Eco53kI GAGCTC 1 cut(s) 1556
Eco57I CTGAAG 1 cut(s) 1064
Eco88I CYCGRG 1 cut(s) 1929
EcoICRI GAGCTC 1 cut(s) 1556
EcoNI CCTNNNNNAGG 1 cut(s) 1250
EcoO109I RGGNCCY 1 cut(s) 1006
EcoRI GAATTC 1 cut(s) 1859
EcoRII CCWGG 4 cut(s) 91, 589, 937, 1251
EcoRV GATATC 1 cut(s) 1606
EcoT14I CCWWGG 3 cut(s) 1246, 1261, 1486
EcoT38I GRGCYC 2 cut(s) 1558, 1949
ErhI CCWWGG 3 cut(s) 1246, 1261, 1486
FalI AAGNNNNNCTT 2 cut(s) 209, 241
FauI CCCGC 2 cut(s) 971, 1016
FbaI TGATCA 2 cut(s) 1687, 2092
FblI GTMKAC 2 cut(s) 366, 1217
Fnu4HI GCNGC 7 cut(s) 57, 97, 355, 406, 679, 943, 1578
FokI GGATG 4 cut(s) 28, 1144, 1643, 2135
FriOI GRGCYC 2 cut(s) 1558, 1949
Fsp4HI GCNGC 7 cut(s) 57, 97, 355, 406, 679, 943, 1578
FspBI CTAG 4 cut(s) 558, 755, 924, 1286
FspI TGCGCA 1 cut(s) 913
GlaI GCGC 4 cut(s) 586, 888, 913, 1103
GluI GCNGC 7 cut(s) 57, 97, 355, 406, 679, 943, 1578
HaeIII GGCC 5 cut(s) 147, 922, 1251, 1260, 1338
HapII CCGG 4 cut(s) 153, 210, 351, 1161
HgaI GACGC 2 cut(s) 916, 2070
HhaI GCGC 4 cut(s) 587, 889, 914, 1104
Hin1I GRCGYC 1 cut(s) 2081
Hin6I GCGC 4 cut(s) 585, 887, 912, 1102
HinP1I GCGC 4 cut(s) 585, 887, 912, 1102
HincII GTYRAC 5 cut(s) 487, 628, 1065, 1171, 1614
HindII GTYRAC 5 cut(s) 487, 628, 1065, 1171, 1614
HinfI GANTC 4 cut(s) 124, 141, 1242, 2048
HpaI GTTAAC 1 cut(s) 1171
HpaII CCGG 4 cut(s) 153, 210, 351, 1161
HphI GGTGA 4 cut(s) 170, 518, 1842, 2177
Hpy188III TCNNGA 8 cut(s) 226, 896, 1120, 1601, 1628, 1671, 1922, 2090
Hpy99I CGWCG 2 cut(s) 179, 446
HpyAV CCTTC 6 cut(s) 543, 860, 890, 1088, 1290, 1328
HpyCH4III ACNGT 3 cut(s) 547, 792, 1270
HpyCH4IV ACGT 4 cut(s) 177, 613, 1173, 1721
HpyF10VI GCNNNNNNNGC 7 cut(s) 153, 272, 858, 939, 1257, 1652, 1979
HpyF3I CTNAG 5 cut(s) 372, 1200, 1377, 1441, 2142
HpySE526I ACGT 4 cut(s) 177, 613, 1173, 1721
Hsp92I GRCGYC 1 cut(s) 2081
HspAI GCGC 4 cut(s) 585, 887, 912, 1102
KroI GCCGGC 1 cut(s) 350
KroNI GCCGGC 1 cut(s) 352
Ksp22I TGATCA 2 cut(s) 1687, 2092
KspAI GTTAAC 1 cut(s) 1171
Kzo9I GATC 7 cut(s) 571, 715, 781, 1299, 1673, 1687, 2092
LmnI GCTCC 2 cut(s) 431, 1553
Lsp1109I GCAGC 5 cut(s) 68, 83, 366, 690, 954
LweI GCATC 1 cut(s) 1915
MabI ACCWGGT 1 cut(s) 589
MaeI CTAG 4 cut(s) 558, 755, 924, 1286
MaeII ACGT 4 cut(s) 177, 613, 1173, 1721
MaeIII GTNAC 8 cut(s) 301, 497, 653, 845, 997, 1044, 1840, 2032
MalI GATC 7 cut(s) 573, 717, 783, 1301, 1675, 1689, 2094
MboI GATC 7 cut(s) 571, 715, 781, 1299, 1673, 1687, 2092
MboII GAAGA 7 cut(s) 173, 720, 1192, 1511, 1868, 1913, 2019
MflI RGATCY 3 cut(s) 571, 781, 1673
MhlI GDGCHC 4 cut(s) 317, 1558, 1949, 2072
MlsI TGGCCA 1 cut(s) 1251
MluNI TGGCCA 1 cut(s) 1251
MlyI GAGTC 1 cut(s) 2057
MmeI TCCRAC 3 cut(s) 809, 1188, 2025
MnlI CCTC 8 cut(s) 222, 1195, 1250, 1354, 1446, 1885, 1936, 2023
Mox20I TGGCCA 1 cut(s) 1251
MroNI GCCGGC 1 cut(s) 350
MroXI GAANNNNTTC 1 cut(s) 1503
MscI TGGCCA 1 cut(s) 1251
MseI TTAA 7 cut(s) 437, 707, 1170, 1185, 1311, 1383, 2194
MslI CAYNNNNRTG 3 cut(s) 239, 1392, 1513
Msp20I TGGCCA 1 cut(s) 1251
MspI CCGG 4 cut(s) 153, 210, 351, 1161
MspR9I CCNGG 5 cut(s) 93, 211, 591, 939, 1253
Mva1269I GAATGC 1 cut(s) 914
MvaI CCWGG 4 cut(s) 93, 591, 939, 1253
MvnI CGCG 2 cut(s) 887, 1914
MwoI GCNNNNNNNGC 7 cut(s) 153, 272, 858, 939, 1257, 1652, 1979
NaeI GCCGGC 1 cut(s) 352
NciI CCSGG 1 cut(s) 211
NdeII GATC 7 cut(s) 571, 715, 781, 1299, 1673, 1687, 2092
NgoMIV GCCGGC 1 cut(s) 350
NheI GCTAGC 2 cut(s) 557, 1285
NlaIV GGNNCC 5 cut(s) 185, 783, 832, 1007, 1737
NmuCI GTSAC 4 cut(s) 301, 497, 997, 1840
NsbI TGCGCA 1 cut(s) 913
NspI RCATGY 3 cut(s) 493, 1285, 1710
PaeI GCATGC 1 cut(s) 1285
PciI ACATGT 1 cut(s) 1706
PcsI WCGNNNNNNNCGW 1 cut(s) 480
PctI GAATGC 1 cut(s) 914
PdiI GCCGGC 1 cut(s) 352
PdmI GAANNNNTTC 1 cut(s) 1503
PfeI GAWTC 3 cut(s) 124, 141, 1242
PflMI CCANNNNNTGG 1 cut(s) 213
PkrI GCNGC 7 cut(s) 58, 98, 356, 407, 680, 944, 1579
PleI GAGTC 1 cut(s) 2056
PpsI GAGTC 1 cut(s) 2056
PpuMI RGGWCCY 1 cut(s) 1006
PscI ACATGT 1 cut(s) 1706
PshAI GACNNNNGTC 1 cut(s) 1004
Psp124BI GAGCTC 1 cut(s) 1558
Psp1406I AACGTT 1 cut(s) 1173
Psp5II RGGWCCY 1 cut(s) 1006
Psp6I CCWGG 4 cut(s) 91, 589, 937, 1251
PspGI CCWGG 4 cut(s) 91, 589, 937, 1251
PspN4I GGNNCC 5 cut(s) 185, 783, 832, 1007, 1737
PspPI GGNCC 2 cut(s) 1006, 1735
PspPPI RGGWCCY 1 cut(s) 1006
PstI CTGCAG 3 cut(s) 113, 397, 854
PstNI CAGNNNCTG 3 cut(s) 12, 1835, 2141
PsuI RGATCY 3 cut(s) 571, 781, 1673
RsaI GTAC 4 cut(s) 11, 1468, 1713, 1720
RsaNI GTAC 4 cut(s) 10, 1467, 1712, 1719
RseI CAYNNNNRTG 3 cut(s) 239, 1392, 1513
SacI GAGCTC 1 cut(s) 1558
SaqAI TTAA 7 cut(s) 437, 707, 1170, 1185, 1311, 1383, 2194
SatI GCNGC 7 cut(s) 57, 97, 355, 406, 679, 943, 1578
Sau3AI GATC 7 cut(s) 571, 715, 781, 1299, 1673, 1687, 2092
Sau96I GGNCC 2 cut(s) 1006, 1735
SchI GAGTC 1 cut(s) 2057
ScrFI CCNGG 5 cut(s) 93, 211, 591, 939, 1253
SduI GDGCHC 4 cut(s) 317, 1558, 1949, 2072
SexAI ACCWGGT 1 cut(s) 589
SfaNI GCATC 1 cut(s) 1915
SfcI CTRYAG 7 cut(s) 109, 292, 393, 478, 850, 1142, 1783
SfiI GGCCNNNNNGGCC 1 cut(s) 1257
SinI GGWCC 2 cut(s) 1006, 1735
SmiMI CAYNNNNRTG 3 cut(s) 239, 1392, 1513
SmlI CTYRAG 1 cut(s) 226
SmoI CTYRAG 1 cut(s) 226
SphI GCATGC 1 cut(s) 1285
SsiI CCGC 6 cut(s) 30, 156, 405, 978, 1023, 1577
SspMI CTAG 4 cut(s) 558, 755, 924, 1286
SstI GAGCTC 1 cut(s) 1558
StyD4I CCNGG 5 cut(s) 91, 209, 589, 937, 1251
StyI CCWWGG 3 cut(s) 1246, 1261, 1486
TaaI ACNGT 3 cut(s) 547, 792, 1270
TaiI ACGT 4 cut(s) 180, 616, 1176, 1724
TaqI TCGA 6 cut(s) 192, 800, 823, 1319, 1600, 1923
TatI WGTACW 1 cut(s) 1711
TauI GCSGC 2 cut(s) 408, 1580
TfiI GAWTC 3 cut(s) 124, 141, 1242
Tru1I TTAA 7 cut(s) 437, 707, 1170, 1185, 1311, 1383, 2194
Tru9I TTAA 7 cut(s) 437, 707, 1170, 1185, 1311, 1383, 2194
TscAI CASTG 7 cut(s) 118, 402, 508, 559, 1273, 1336, 1836
TseFI GTSAC 4 cut(s) 301, 497, 997, 1840
TseI GCWGC 5 cut(s) 56, 96, 354, 678, 942
Tsp45I GTSAC 4 cut(s) 301, 497, 997, 1840
TspGWI ACGGA 1 cut(s) 794
TspRI CASTG 7 cut(s) 118, 402, 508, 559, 1273, 1336, 1836
Van91I CCANNNNNTGG 1 cut(s) 213
VneI GTGCAC 1 cut(s) 2068
VpaK11BI GGWCC 2 cut(s) 1006, 1735
XagI CCTNNNNNAGG 1 cut(s) 1250
XapI RAATTY 5 cut(s) 37, 1226, 1502, 1859, 1917
XceI RCATGY 3 cut(s) 493, 1285, 1710
XmiI GTMKAC 2 cut(s) 366, 1217
XmnI GAANNNNTTC 1 cut(s) 1503
XspI CTAG 4 cut(s) 558, 755, 924, 1286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.