Rorug02G0435000

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
55595305 .. 55597662
2358 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0435000.1

Sequence Viewer

Length: 570 bp
ATGTCTCAACCCATGTCCTCCGATCACGACCACAACAACTCCGACGCGGTCCCGACCCGCCTCTACAACCCCTACCAAGATCTCCAGGTCCCAATTCAAAACCTTTACCACCTCCCCACCTCCCCGGAGTTCCTCTTCGTCGAGGAGGCCCGCCGCCAGCGCCGCTCCTGGGGCGAGAATCTCACCTTCTACACCGGCTGCACCTACCTCGCCGGCGCCGTCGGCGGCGGATCCGTCGGCCTCGTCTCCGGCGTCCGATCGTTCGAATCCGGCGACACCACCAAGCTCAGGATCAACCGGGTCCTCAACTCGTCGGGCCACACGGGTCGGGTCTGGGCCAACCGGCTCGGCGTGATCGGGTTGCTCTATGCGGGTATGGAGAGCGGGGTTCAGGCGCTGAGGGATACGGACGATGTCTGGAATAGCGTTGCCGCGGGGCTCGGTACCGGAGCGGTGTACCGTGCGGCGAGGGGAGTGAGGTCGGCGGCGGTGGCCGGCGCCGTTGGAGGAGTGCTAGTCGGAGTGGCAGTTGCGGCAAAGCAGGGGCTGAAGCGATACGTGCCGATATGA

Protein Analysis

189

Amino Acids

20.14

Weight (kDa)

9.41

Isoelectric Point (pI)

48.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tim17 PF02466 62 - 172 6.1e-30 Tim17/Tim22/Tim23/Pmp24 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 443
AccB1I GGYRCC 3 cut(s) 215, 443, 497
AccBSI CCGCTC 3 cut(s) 165, 384, 452
AccII CGCG 2 cut(s) 47, 434
AclWI GGATC 3 cut(s) 225, 238, 299
AcoI YGGCCR 1 cut(s) 492
AcuI CTGAAG 1 cut(s) 569
AcyI GRCGYC 3 cut(s) 216, 252, 498
AfaI GTAC 2 cut(s) 445, 458
AfiI CCNNNNNNNGG 2 cut(s) 169, 288
AgsI TTSAA 1 cut(s) 98
AjnI CCWGG 2 cut(s) 84, 167
AluBI AGCT 1 cut(s) 286
AluI AGCT 1 cut(s) 286
Alw26I GTCTC 2 cut(s) 9, 250
AlwI GGATC 3 cut(s) 225, 238, 299
AlwNI CAGNNNCTG 2 cut(s) 397, 547
AoxI GGCC 5 cut(s) 147, 238, 316, 336, 492
ApeKI GCWGC 1 cut(s) 198
Asp718I GGTACC 1 cut(s) 443
AspLEI GCGC 4 cut(s) 162, 218, 397, 500
AspS9I GGNCC 6 cut(s) 49, 88, 148, 301, 316, 336
AsuC2I CCSGG 2 cut(s) 125, 299
AsuHPI GGTGA 1 cut(s) 175
AsuII TTCGAA 1 cut(s) 264
AvaII GGWCC 3 cut(s) 49, 88, 301
BamHI GGATCC 1 cut(s) 230
BanI GGYRCC 3 cut(s) 215, 443, 497
BanII GRGCYC 1 cut(s) 441
BbvCI CCTCAGC 1 cut(s) 398
BbvI GCAGC 1 cut(s) 185
BceAI ACGGC 2 cut(s) 203, 485
BcgI CGANNNNNNTGC 2 cut(s) 190, 224
BciT130I CCWGG 2 cut(s) 86, 169
BciVI GTATCC 1 cut(s) 397
BcnI CCSGG 2 cut(s) 125, 299
BcoDI GTCTC 2 cut(s) 9, 250
BfaI CTAG 1 cut(s) 515
BfoI RGCGCY 4 cut(s) 163, 219, 398, 501
BfuI GTATCC 1 cut(s) 397
BglII AGATCT 1 cut(s) 79
BisI GCNGC 8 cut(s) 154, 163, 199, 226, 432, 465, 486, 534
BlsI GCNGC 8 cut(s) 155, 164, 200, 227, 433, 466, 487, 535
Bme1390I CCNGG 4 cut(s) 86, 125, 169, 299
Bme18I GGWCC 3 cut(s) 49, 88, 301
BmgT120I GGNCC 6 cut(s) 49, 88, 148, 301, 316, 336
BmiI GGNNCC 7 cut(s) 51, 90, 217, 232, 302, 445, 499
BmrFI CCNGG 4 cut(s) 86, 125, 169, 299
BpmI CTGGAG 1 cut(s) 68
Bpu10I CCTNAGC 2 cut(s) 287, 398
Bpu14I TTCGAA 1 cut(s) 264
BpuMI CCSGG 2 cut(s) 125, 299
BsaAI YACGTR 1 cut(s) 559
BsaHI GRCGYC 3 cut(s) 216, 252, 498
BsaJI CCNNGG 3 cut(s) 123, 168, 432
BsaWI WCCGGW 1 cut(s) 446
BsaXI ACNNNNNCTCC 6 cut(s) 23, 53, 501, 513, 531, 543
Bsc4I CCNNNNNNNGG 2 cut(s) 169, 288
Bse118I RCCGGY 4 cut(s) 194, 212, 342, 494
BseBI CCWGG 2 cut(s) 86, 169
BseDI CCNNGG 3 cut(s) 123, 168, 432
BseLI CCNNNNNNNGG 2 cut(s) 169, 288
BseMII CTCAG 2 cut(s) 301, 389
BseRI GAGGAG 2 cut(s) 158, 522
BseXI GCAGC 1 cut(s) 185
BsgI GTGCAG 1 cut(s) 184
Bsh1236I CGCG 2 cut(s) 47, 434
Bsh1285I CGRYCG 1 cut(s) 260
BshFI GGCC 5 cut(s) 149, 240, 318, 338, 494
BshNI GGYRCC 3 cut(s) 215, 443, 497
BsiEI CGRYCG 1 cut(s) 260
BsiSI CCGG 9 cut(s) 125, 195, 213, 249, 270, 298, 343, 447, 495
BslFI GGGAC 2 cut(s) 35, 74
BslI CCNNNNNNNGG 2 cut(s) 169, 288
BsmAI GTCTC 2 cut(s) 9, 250
BsmBI CGTCTC 1 cut(s) 250
BsmFI GGGAC 2 cut(s) 35, 74
BsnI GGCC 5 cut(s) 149, 240, 318, 338, 494
Bsp119I TTCGAA 1 cut(s) 264
Bsp1286I GDGCHC 1 cut(s) 441
Bsp143I GATC 6 cut(s) 22, 79, 230, 257, 291, 354
BspANI GGCC 5 cut(s) 149, 240, 318, 338, 494
BspCNI CTCAG 2 cut(s) 300, 390
BspFNI CGCG 2 cut(s) 47, 434
BspLI GGNNCC 7 cut(s) 51, 90, 217, 232, 302, 445, 499
BspPI GGATC 3 cut(s) 225, 238, 299
BspT104I TTCGAA 1 cut(s) 264
BspT107I GGYRCC 3 cut(s) 215, 443, 497
BsrBI CCGCTC 3 cut(s) 165, 384, 452
BsrFI RCCGGY 4 cut(s) 194, 212, 342, 494
BssAI RCCGGY 4 cut(s) 194, 212, 342, 494
BssECI CCNNGG 3 cut(s) 123, 168, 432
BssMI GATC 6 cut(s) 22, 79, 230, 257, 291, 354
BssNI GRCGYC 3 cut(s) 216, 252, 498
Bst2UI CCWGG 2 cut(s) 86, 169
Bst4CI ACNGT 1 cut(s) 461
Bst6I CTCTTC 1 cut(s) 140
BstACI GRCGYC 3 cut(s) 216, 252, 498
BstBAI YACGTR 1 cut(s) 559
BstBI TTCGAA 1 cut(s) 264
BstC8I GCNNGC 4 cut(s) 151, 158, 214, 496
BstDEI CTNAG 2 cut(s) 287, 398
BstDSI CCRYGG 1 cut(s) 432
BstFNI CGCG 2 cut(s) 47, 434
BstH2I RGCGCY 4 cut(s) 163, 219, 398, 501
BstHHI GCGC 4 cut(s) 162, 218, 397, 500
BstKTI GATC 6 cut(s) 25, 82, 233, 260, 294, 357
BstMAI GTCTC 2 cut(s) 9, 250
BstMBI GATC 6 cut(s) 22, 79, 230, 257, 291, 354
BstMCI CGRYCG 1 cut(s) 260
BstMWI GCNNNNNNNGC 7 cut(s) 159, 162, 171, 222, 491, 533, 559
BstNI CCWGG 2 cut(s) 86, 169
BstSCI CCNGG 4 cut(s) 84, 123, 167, 297
BstUI CGCG 2 cut(s) 47, 434
BstV1I GCAGC 1 cut(s) 185
BstX2I RGATCY 2 cut(s) 79, 230
BstYI RGATCY 2 cut(s) 79, 230
BsuI GTATCC 1 cut(s) 397
BsuRI GGCC 5 cut(s) 149, 240, 318, 338, 494
BtgI CCRYGG 1 cut(s) 432
Cac8I GCNNGC 4 cut(s) 151, 158, 214, 496
CaiI CAGNNNCTG 2 cut(s) 397, 547
CfoI GCGC 4 cut(s) 162, 218, 397, 500
Cfr10I RCCGGY 4 cut(s) 194, 212, 342, 494
Cfr13I GGNCC 6 cut(s) 49, 88, 148, 301, 316, 336
Cfr42I CCGCGG 1 cut(s) 435
CseI GACGC 2 cut(s) 53, 241
Csp6I GTAC 2 cut(s) 444, 457
CviAII CATG 1 cut(s) 13
CviQI GTAC 2 cut(s) 444, 457
DdeI CTNAG 2 cut(s) 287, 398
DinI GGCGCC 2 cut(s) 217, 499
DpnI GATC 6 cut(s) 24, 81, 232, 259, 293, 356
DpnII GATC 6 cut(s) 22, 79, 230, 257, 291, 354
EaeI YGGCCR 1 cut(s) 492
Eam1104I CTCTTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 140
EciI GGCGGA 1 cut(s) 243
Eco24I GRGCYC 1 cut(s) 441
Eco47I GGWCC 3 cut(s) 49, 88, 301
Eco57I CTGAAG 1 cut(s) 569
EcoO109I RGGNCCY 2 cut(s) 88, 301
EcoRII CCWGG 2 cut(s) 84, 167
EcoT38I GRGCYC 1 cut(s) 441
EgeI GGCGCC 2 cut(s) 217, 499
EheI GGCGCC 2 cut(s) 217, 499
Esp3I CGTCTC 1 cut(s) 250
FaeI CATG 1 cut(s) 16
FaiI YATR 4 cut(s) 14, 369, 377, 568
FaqI GGGAC 2 cut(s) 35, 74
FatI CATG 1 cut(s) 12
FauI CCCGC 5 cut(s) 65, 158, 364, 377, 427
Fnu4HI GCNGC 8 cut(s) 154, 163, 199, 226, 432, 465, 486, 534
FriOI GRGCYC 1 cut(s) 441
Fsp4HI GCNGC 8 cut(s) 154, 163, 199, 226, 432, 465, 486, 534
FspBI CTAG 1 cut(s) 515
GlaI GCGC 4 cut(s) 161, 217, 396, 499
GluI GCNGC 8 cut(s) 154, 163, 199, 226, 432, 465, 486, 534
GsuI CTGGAG 1 cut(s) 68
HaeII RGCGCY 4 cut(s) 163, 219, 398, 501
HaeIII GGCC 5 cut(s) 149, 240, 318, 338, 494
HapII CCGG 9 cut(s) 125, 195, 213, 249, 270, 298, 343, 447, 495
HgaI GACGC 2 cut(s) 53, 241
HhaI GCGC 4 cut(s) 162, 218, 397, 500
Hin1I GRCGYC 3 cut(s) 216, 252, 498
Hin1II CATG 1 cut(s) 16
Hin6I GCGC 4 cut(s) 160, 216, 395, 498
HinP1I GCGC 4 cut(s) 160, 216, 395, 498
HinfI GANTC 2 cut(s) 178, 266
HpaII CCGG 9 cut(s) 125, 195, 213, 249, 270, 298, 343, 447, 495
HphI GGTGA 1 cut(s) 175
Hpy166II GTNNAC 1 cut(s) 457
Hpy188I TCNGA 4 cut(s) 22, 43, 257, 521
Hpy188III TCNNGA 4 cut(s) 26, 52, 289, 418
Hpy8I GTNNAC 1 cut(s) 457
Hpy99I CGWCG 5 cut(s) 47, 143, 224, 239, 316
HpyAV CCTTC 1 cut(s) 196
HpyCH4III ACNGT 1 cut(s) 461
HpyCH4IV ACGT 1 cut(s) 558
HpyCH4V TGCA 1 cut(s) 201
HpyF10VI GCNNNNNNNGC 7 cut(s) 159, 162, 171, 222, 491, 533, 559
HpyF3I CTNAG 2 cut(s) 287, 398
HpySE526I ACGT 1 cut(s) 558
Hsp92I GRCGYC 3 cut(s) 216, 252, 498
Hsp92II CATG 1 cut(s) 16
HspAI GCGC 4 cut(s) 160, 216, 395, 498
KasI GGCGCC 2 cut(s) 215, 497
KpnI GGTACC 1 cut(s) 447
KroI GCCGGC 2 cut(s) 212, 494
KroNI GCCGGC 2 cut(s) 214, 496
KspI CCGCGG 1 cut(s) 435
Kzo9I GATC 6 cut(s) 22, 79, 230, 257, 291, 354
LmnI GCTCC 2 cut(s) 170, 449
Lsp1109I GCAGC 1 cut(s) 185
MaeI CTAG 1 cut(s) 515
MaeII ACGT 1 cut(s) 558
MalI GATC 6 cut(s) 24, 81, 232, 259, 293, 356
MbiI CCGCTC 3 cut(s) 165, 384, 452
MboI GATC 6 cut(s) 22, 79, 230, 257, 291, 354
MboII GAAGA 1 cut(s) 127
MflI RGATCY 2 cut(s) 79, 230
MhlI GDGCHC 1 cut(s) 441
MluCI AATT 1 cut(s) 93
Mly113I GGCGCC 2 cut(s) 216, 498
MmeI TCCRAC 3 cut(s) 66, 484, 499
MreI CGCCGGCG 1 cut(s) 212
MroNI GCCGGC 2 cut(s) 212, 494
MspA1I CMGCKG 1 cut(s) 434
MspI CCGG 9 cut(s) 125, 195, 213, 249, 270, 298, 343, 447, 495
MspR9I CCNGG 4 cut(s) 86, 125, 169, 299
MvaI CCWGG 2 cut(s) 86, 169
MvnI CGCG 2 cut(s) 47, 434
MwoI GCNNNNNNNGC 7 cut(s) 159, 162, 171, 222, 491, 533, 559
NaeI GCCGGC 2 cut(s) 214, 496
NarI GGCGCC 2 cut(s) 216, 498
NciI CCSGG 2 cut(s) 125, 299
NdeII GATC 6 cut(s) 22, 79, 230, 257, 291, 354
NgoMIV GCCGGC 2 cut(s) 212, 494
NlaIII CATG 1 cut(s) 16
NlaIV GGNNCC 7 cut(s) 51, 90, 217, 232, 302, 445, 499
NmeAIII GCCGAG 1 cut(s) 327
NspV TTCGAA 1 cut(s) 264
PcsI WCGNNNNNNNCGW 3 cut(s) 216, 249, 270
PdiI GCCGGC 2 cut(s) 214, 496
PfeI GAWTC 2 cut(s) 178, 266
PflFI GACNNNGTC 2 cut(s) 47, 413
PkrI GCNGC 8 cut(s) 155, 164, 200, 227, 433, 466, 487, 535
Ple19I CGATCG 1 cut(s) 260
PluTI GGCGCC 2 cut(s) 219, 501
Ppu21I YACGTR 1 cut(s) 559
PpuMI RGGWCCY 2 cut(s) 88, 301
Psp5II RGGWCCY 2 cut(s) 88, 301
Psp6I CCWGG 2 cut(s) 84, 167
PspGI CCWGG 2 cut(s) 84, 167
PspN4I GGNNCC 7 cut(s) 51, 90, 217, 232, 302, 445, 499
PspPI GGNCC 6 cut(s) 49, 88, 148, 301, 316, 336
PspPPI RGGWCCY 2 cut(s) 88, 301
PstNI CAGNNNCTG 2 cut(s) 397, 547
PsuI RGATCY 2 cut(s) 79, 230
PsyI GACNNNGTC 2 cut(s) 47, 413
PvuI CGATCG 1 cut(s) 260
RsaI GTAC 2 cut(s) 445, 458
RsaNI GTAC 2 cut(s) 444, 457
SacII CCGCGG 1 cut(s) 435
SatI GCNGC 8 cut(s) 154, 163, 199, 226, 432, 465, 486, 534
Sau3AI GATC 6 cut(s) 22, 79, 230, 257, 291, 354
Sau96I GGNCC 6 cut(s) 49, 88, 148, 301, 316, 336
ScrFI CCNGG 4 cut(s) 86, 125, 169, 299
SduI GDGCHC 1 cut(s) 441
SfoI GGCGCC 2 cut(s) 217, 499
Sfr303I CCGCGG 1 cut(s) 435
SfuI TTCGAA 1 cut(s) 264
SgrAI CRCCGGYG 1 cut(s) 212
SgrBI CCGCGG 1 cut(s) 435
SinI GGWCC 3 cut(s) 49, 88, 301
Sse9I AATT 1 cut(s) 93
SspDI GGCGCC 2 cut(s) 215, 497
SspMI CTAG 1 cut(s) 515
StyD4I CCNGG 4 cut(s) 84, 123, 167, 297
TaaI ACNGT 1 cut(s) 461
TaiI ACGT 1 cut(s) 561
TaqI TCGA 2 cut(s) 141, 264
TasI AATT 1 cut(s) 93
TauI GCSGC 7 cut(s) 156, 165, 228, 434, 467, 488, 536
TfiI GAWTC 2 cut(s) 178, 266
TseI GCWGC 1 cut(s) 198
TspGWI ACGGA 2 cut(s) 223, 422
Tth111I GACNNNGTC 2 cut(s) 47, 413
VpaK11BI GGWCC 3 cut(s) 49, 88, 301
XspI CTAG 1 cut(s) 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.