RchiOBHm_Chr2g0117481

wall-associated receptor kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000052
Physical Location & Seq
Reverse (-)
29643389 .. 29646102
2714 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49040

Sequence Viewer

Length: 2007 bp
ATGGCTACATCGCAGTTGGCAGCACTGTATATTACTGTGTTCTTGTTGTCTATGAGTACTAGTACTCCAACACTAGCAGTATCAGTACCCATGACAAAGCCTGGTTGTTCAACTCATTGCGGAACTGTTGAAATTCCATATCCTTTTGGGATTGAACCTGATTGTTACATTAACGAATGGTTCCAAATACTCTGCGAAAGCTCCACCGGCCTTCTCAAGCCTCTCTTGAACAGCATGCATCTGGAGGTGTGGGATATTTCTGTTGCAGGCACGATAAGGGTCACAAACCCGATCACCTTCTCTAATTGCAGTAACAGCCTGGTCAACCCTGTCCAGACATTCACTCTGGAGGGAAGCCCTTTTCTGTTCTCCCAGAAAAATAGGTTTACTTCAATCAGTTGCAACGAAATTGCTCTGCTGACTTCATCAGACGGATATCCAATTGGTGGTTGTTTGTCTATTTGTGATAACGGATCTTCTCTTACTCCTAGCAGTACTGGGAGAATACTAAACCATGATAGTTGCAGTGGTACAAACTGCTGCCAGTCCACAATTCCGCTTGATCTTTATGCCTTCAATACTAGTTTTCAGAAGTTGAATGATGTGAAGATTGGAAGTGCCTGCAATCATGCATTCCCGGTAGACCAGGATTGGTTTATGTCAAACTCAATAAACATTTCTCCGGCTGGTGAAATATTTGACTCCATCCCTGTAGTGCTGGATTGGAACTTATATAACTATTCGCCTCCTGCCCTTAGTGAGGATGACCATTTCGTCAAATCCTTCCACTGCGAAAGAATTCAAAATAAAATGCAGCCCCAGAACATTAGTACTCGATGTTTCTGCTCAAAGGGCTTTCAAGGAAATCCATATTTTTTTCTGGGATGTCAACAAGATGAGTGTGGTGCTAGGAGTCATATCTGCCAAAGATCCTTTCCGAGTTCTGTGAGCTACACAGGCCTTGGACTACTAATCTTCCTCATAGTGGTCGCACGGTGGTTGAACAGGGTCATAAAGAAAAGGAAACACAATAAAAGCAAGGCAATGTTTTTTAAACAAAATGGTGGTTTACTGTTGCAGCAACAATCAGCCACCGGCGAAGTCCATGTTGAGAAAATTAAGCTGTTCACTTCCAAGGAGTTGCTCAAAGCCACAAACGAGTTTAATGTAAACAGAGTTCTTGGCCATGGAAGTCAAGGTACCGTTTACAAAGGAATGTTGGAAGATGGAAAAATTGTTGCTGTAAAGAAGTCCAAAATAGTTGATGGAGGCGAAGTTGGAGAGTTCATTAATGAAATTGTCATTCTTTCACAAATCAACCACAGGAATGTCGTCAAGCTATTAGGTTGTTGCTTAGAGACAGAAGTTCCGCTTTTGGTTTACGAATTCATACTCAATGGAAGCCTTTCTCAATACATTCATCATCAAAATGATTTTCGTCTCACATGGGAAATGCGCTTACGAGTTTCTATGCAAGTTGCTGGAGCTCTTTCCTACTTGCATTCATCTACTTGCCTGCCAATTTACCATCGAGACATCAAGTCAGGTAACATACTCCTGGATGATAAGTTTAATGCCAAAATAGCTGATTTTGGGACTTCAAGATCCATTAGCATTGACAAAACGCATCTTACAACACTAGTAAAAGGAACATTTGGTTATCTAGATCCAGGATATTTTCAATCCAGCCAATTTACGGACAAGAGTGACGTTTATAGCTTTGGAGTGGTCCTTGTTGAGCTCTTAACTGGACAAAAACCAGTTTTCTTGACACCATCTGGAGAATGGAGTAGCCTAGCAACTCATTTCATTGAGTCCATGGAAGAAAATAGTCTGTTTGATATTATTGATGCGCGAGTTCGAGTTATGAAGGATGGTGGGAAGGAAGAGATCATAGCAGTTGCTAACCTTGCCAAAAGATGCTTGGATTTGAATGGAAAGAAACGTCCAACTATGAAAGAAGTAGCAGCGACGCTAGAGGAAATTCTACTGTTAGTTACTAGTTAG

Protein Analysis

668

Amino Acids

74.04

Weight (kDa)

6.5

Isoelectric Point (pI)

40.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 36 - 95 1.4e-09 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 388 - 656 8.1e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 390 - 658 2.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 773
Acc65I GGTACC 1 cut(s) 1199
AccB1I GGYRCC 1 cut(s) 1199
AccB7I CCANNNNNTGG 1 cut(s) 446
AccI GTMKAC 1 cut(s) 642
AccII CGCG 1 cut(s) 1855
AciI CCGC 3 cut(s) 120, 557, 1370
AclWI GGATC 4 cut(s) 481, 924, 1599, 1661
AcoI YGGCCR 1 cut(s) 1183
AcsI RAATTY 4 cut(s) 132, 798, 1385, 1983
AfaI GTAC 7 cut(s) 58, 64, 87, 496, 532, 832, 1201
AfiI CCNNNNNNNGG 4 cut(s) 446, 760, 985, 1696
AhdI GACNNNNNGTC 1 cut(s) 1540
AhlI ACTAGT 4 cut(s) 59, 581, 1639, 2000
AjnI CCWGG 5 cut(s) 100, 318, 645, 1557, 1669
AjuI GAANNNNNNNTTGG 2 cut(s) 918, 950
AluBI AGCT 8 cut(s) 201, 951, 1123, 1339, 1487, 1586, 1719, 1741
AluI AGCT 8 cut(s) 201, 951, 1123, 1339, 1487, 1586, 1719, 1741
Alw21I GWGCWC 2 cut(s) 1489, 1743
Alw26I GTCTC 3 cut(s) 1352, 1445, 1527
AlwI GGATC 4 cut(s) 481, 924, 1599, 1661
AoxI GGCC 3 cut(s) 208, 958, 1183
ApeKI GCWGC 5 cut(s) 20, 540, 814, 1078, 1967
ApoI RAATTY 4 cut(s) 132, 798, 1385, 1983
AseI ATTAAT 1 cut(s) 1290
Asp700I GAANNNNTTC 2 cut(s) 798, 1405
Asp718I GGTACC 1 cut(s) 1199
AspLEI GCGC 2 cut(s) 1458, 1855
AspS9I GGNCC 1 cut(s) 1729
AsuC2I CCSGG 1 cut(s) 638
AsuHPI GGTGA 2 cut(s) 286, 701
AvaII GGWCC 1 cut(s) 1729
BalI TGGCCA 1 cut(s) 1185
BanI GGYRCC 1 cut(s) 1199
BanII GRGCYC 2 cut(s) 1489, 1743
BarI GAAGNNNNNNTAC 2 cut(s) 1183, 1215
Bbv12I GWGCWC 2 cut(s) 1489, 1743
BbvI GCAGC 5 cut(s) 32, 527, 826, 1090, 1979
BccI CCATC 6 cut(s) 713, 1220, 1259, 1536, 1783, 1868
BcgI CGANNNNNNTGC 2 cut(s) 825, 859
BciT130I CCWGG 5 cut(s) 102, 320, 647, 1559, 1671
BcnI CCSGG 1 cut(s) 638
BcoDI GTCTC 3 cut(s) 1352, 1445, 1527
BcuI ACTAGT 4 cut(s) 59, 581, 1639, 2000
BfmI CTRYAG 1 cut(s) 711
BisI GCNGC 5 cut(s) 21, 541, 815, 1079, 1968
BlsI GCNGC 5 cut(s) 22, 542, 816, 1080, 1969
BmcAI AGTACT 4 cut(s) 58, 64, 496, 832
Bme1390I CCNGG 6 cut(s) 102, 320, 638, 647, 1559, 1671
Bme18I GGWCC 1 cut(s) 1729
BmeRI GACNNNNNGTC 1 cut(s) 1540
BmgT120I GGNCC 1 cut(s) 1729
BmiI GGNNCC 2 cut(s) 182, 1201
BmrFI CCNGG 6 cut(s) 102, 320, 638, 647, 1559, 1671
BmrI ACTGGG 1 cut(s) 507
BmsI GCATC 4 cut(s) 247, 1636, 1840, 1910
BmuI ACTGGG 1 cut(s) 507
BpmI CTGGAG 4 cut(s) 263, 368, 1503, 1800
BpuEI CTTGAG 1 cut(s) 200
BpuMI CCSGG 1 cut(s) 638
BsaJI CCNNGG 4 cut(s) 961, 1134, 1186, 1818
BsaXI ACNNNNNCTCC 4 cut(s) 49, 79, 1260, 1290
Bsc4I CCNNNNNNNGG 4 cut(s) 446, 760, 985, 1696
Bse118I RCCGGY 2 cut(s) 206, 1094
Bse1I ACTGG 4 cut(s) 502, 544, 1753, 1760
Bse3DI GCAATG 2 cut(s) 115, 1050
BseBI CCWGG 5 cut(s) 102, 320, 647, 1559, 1671
BseDI CCNNGG 4 cut(s) 961, 1134, 1186, 1818
BseGI GGATG 5 cut(s) 705, 769, 890, 1567, 1879
BseLI CCNNNNNNNGG 4 cut(s) 446, 760, 985, 1696
BseMI GCAATG 2 cut(s) 115, 1050
BseNI ACTGG 4 cut(s) 502, 544, 1753, 1760
BseXI GCAGC 5 cut(s) 32, 527, 826, 1090, 1979
Bsh1236I CGCG 1 cut(s) 1855
BshFI GGCC 3 cut(s) 210, 960, 1185
BshNI GGYRCC 1 cut(s) 1199
BsiHKAI GWGCWC 2 cut(s) 1489, 1743
BsiSI CCGG 4 cut(s) 207, 638, 683, 1095
BslFI GGGAC 1 cut(s) 1609
BslI CCNNNNNNNGG 4 cut(s) 446, 760, 985, 1696
BsmAI GTCTC 3 cut(s) 1352, 1445, 1527
BsmBI CGTCTC 1 cut(s) 1445
BsmFI GGGAC 1 cut(s) 1609
BsmI GAATGC 2 cut(s) 632, 1501
BsnI GGCC 3 cut(s) 210, 960, 1185
Bsp1286I GDGCHC 2 cut(s) 1489, 1743
Bsp143I GATC 7 cut(s) 291, 473, 562, 929, 1604, 1666, 1890
Bsp19I CCATGG 2 cut(s) 1186, 1818
BspACI CCGC 3 cut(s) 120, 557, 1370
BspANI GGCC 3 cut(s) 210, 960, 1185
BspFNI CGCG 1 cut(s) 1855
BspLI GGNNCC 2 cut(s) 182, 1201
BspPI GGATC 4 cut(s) 481, 924, 1599, 1661
BspT107I GGYRCC 1 cut(s) 1199
BsrDI GCAATG 2 cut(s) 115, 1050
BsrFI RCCGGY 2 cut(s) 206, 1094
BsrI ACTGG 4 cut(s) 502, 544, 1753, 1760
BssAI RCCGGY 2 cut(s) 206, 1094
BssECI CCNNGG 4 cut(s) 961, 1134, 1186, 1818
BssMI GATC 7 cut(s) 291, 473, 562, 929, 1604, 1666, 1890
BssT1I CCWWGG 4 cut(s) 961, 1134, 1186, 1818
Bst2UI CCWGG 5 cut(s) 102, 320, 647, 1559, 1671
Bst4CI ACNGT 7 cut(s) 27, 37, 127, 996, 1074, 1204, 1992
Bst6I CTCTTC 1 cut(s) 1881
BstC8I GCNNGC 4 cut(s) 236, 268, 622, 1517
BstDEI CTNAG 2 cut(s) 755, 1354
BstDSI CCRYGG 2 cut(s) 1186, 1818
BstENI CCTNNNNNAGG 1 cut(s) 758
BstF5I GGATG 5 cut(s) 705, 769, 890, 1567, 1879
BstFNI CGCG 1 cut(s) 1855
BstHHI GCGC 2 cut(s) 1458, 1855
BstKTI GATC 7 cut(s) 294, 476, 565, 932, 1607, 1669, 1893
BstMAI GTCTC 3 cut(s) 1352, 1445, 1527
BstMBI GATC 7 cut(s) 291, 473, 562, 929, 1604, 1666, 1890
BstMWI GCNNNNNNNGC 6 cut(s) 207, 315, 852, 957, 1583, 1910
BstNI CCWGG 5 cut(s) 102, 320, 647, 1559, 1671
BstNSI RCATGY 1 cut(s) 238
BstSCI CCNGG 6 cut(s) 100, 318, 636, 645, 1557, 1669
BstSFI CTRYAG 1 cut(s) 711
BstUI CGCG 1 cut(s) 1855
BstV1I GCAGC 5 cut(s) 32, 527, 826, 1090, 1979
BstX2I RGATCY 4 cut(s) 473, 929, 1604, 1666
BstYI RGATCY 4 cut(s) 473, 929, 1604, 1666
BsuRI GGCC 3 cut(s) 210, 960, 1185
BtgI CCRYGG 2 cut(s) 1186, 1818
BtsCI GGATG 5 cut(s) 705, 769, 890, 1567, 1879
BtsI GCAGTG 2 cut(s) 532, 787
BtsIMutI CAGTG 3 cut(s) 23, 532, 787
Cac8I GCNNGC 4 cut(s) 236, 268, 622, 1517
CfoI GCGC 2 cut(s) 1458, 1855
Cfr10I RCCGGY 2 cut(s) 206, 1094
Cfr13I GGNCC 1 cut(s) 1729
CseI GACGC 1 cut(s) 1981
Csp6I GTAC 7 cut(s) 57, 63, 86, 495, 531, 831, 1200
CviAII CATG 8 cut(s) 91, 235, 515, 629, 1106, 1187, 1446, 1819
CviQI GTAC 7 cut(s) 57, 63, 86, 495, 531, 831, 1200
DdeI CTNAG 2 cut(s) 755, 1354
DpnI GATC 7 cut(s) 293, 475, 564, 931, 1606, 1668, 1892
DpnII GATC 7 cut(s) 291, 473, 562, 929, 1604, 1666, 1890
DraI TTTAAA 1 cut(s) 1054
DrdI GACNNNNNNGTC 1 cut(s) 773
DriI GACNNNNNGTC 1 cut(s) 1540
DseDI GACNNNNNNGTC 1 cut(s) 773
EaeI YGGCCR 1 cut(s) 1183
Eam1104I CTCTTC 1 cut(s) 1881
Eam1105I GACNNNNNGTC 1 cut(s) 1540
EarI CTCTTC 1 cut(s) 1881
Ecl136II GAGCTC 2 cut(s) 1487, 1741
Eco130I CCWWGG 4 cut(s) 961, 1134, 1186, 1818
Eco147I AGGCCT 1 cut(s) 960
Eco24I GRGCYC 2 cut(s) 1489, 1743
Eco32I GATATC 1 cut(s) 437
Eco47I GGWCC 1 cut(s) 1729
Eco53kI GAGCTC 2 cut(s) 1487, 1741
EcoICRI GAGCTC 2 cut(s) 1487, 1741
EcoNI CCTNNNNNAGG 1 cut(s) 758
EcoRI GAATTC 2 cut(s) 798, 1385
EcoRII CCWGG 5 cut(s) 100, 318, 645, 1557, 1669
EcoRV GATATC 1 cut(s) 437
EcoT14I CCWWGG 4 cut(s) 961, 1134, 1186, 1818
EcoT22I ATGCAT 2 cut(s) 240, 634
EcoT38I GRGCYC 2 cut(s) 1489, 1743
ErhI CCWWGG 4 cut(s) 961, 1134, 1186, 1818
Esp3I CGTCTC 1 cut(s) 1445
FaeI CATG 8 cut(s) 94, 238, 518, 632, 1109, 1190, 1449, 1822
FalI AAGNNNNNCTT 4 cut(s) 209, 241, 1356, 1388
FaqI GGGAC 1 cut(s) 1609
FatI CATG 8 cut(s) 90, 234, 514, 628, 1105, 1186, 1445, 1818
FblI GTMKAC 1 cut(s) 642
Fnu4HI GCNGC 5 cut(s) 21, 541, 815, 1079, 1968
FokI GGATG 5 cut(s) 692, 776, 897, 1574, 1886
FriOI GRGCYC 2 cut(s) 1489, 1743
Fsp4HI GCNGC 5 cut(s) 21, 541, 815, 1079, 1968
GlaI GCGC 2 cut(s) 1457, 1854
GluI GCNGC 5 cut(s) 21, 541, 815, 1079, 1968
GsuI CTGGAG 4 cut(s) 263, 368, 1503, 1800
HaeIII GGCC 3 cut(s) 210, 960, 1185
HapII CCGG 4 cut(s) 207, 638, 683, 1095
HgaI GACGC 1 cut(s) 1981
HhaI GCGC 2 cut(s) 1458, 1855
Hin1II CATG 8 cut(s) 94, 238, 518, 632, 1109, 1190, 1449, 1822
Hin6I GCGC 2 cut(s) 1456, 1853
HinP1I GCGC 2 cut(s) 1456, 1853
HincII GTYRAC 2 cut(s) 325, 890
HindII GTYRAC 2 cut(s) 325, 890
HinfI GANTC 3 cut(s) 701, 913, 1814
HpaII CCGG 4 cut(s) 207, 638, 683, 1095
HphI GGTGA 2 cut(s) 286, 701
Hpy188I TCNGA 3 cut(s) 430, 591, 939
Hpy188III TCNNGA 9 cut(s) 226, 242, 334, 347, 1532, 1602, 1664, 1768, 1779
Hpy99I CGWCG 1 cut(s) 1975
HpyAV CCTTC 6 cut(s) 221, 307, 583, 793, 1864, 1876
HpyCH4III ACNGT 7 cut(s) 27, 37, 127, 996, 1074, 1204, 1992
HpyCH4IV ACGT 2 cut(s) 1710, 1945
HpyF10VI GCNNNNNNNGC 6 cut(s) 207, 315, 852, 957, 1583, 1910
HpyF3I CTNAG 2 cut(s) 755, 1354
HpySE526I ACGT 2 cut(s) 1710, 1945
Hsp92II CATG 8 cut(s) 94, 238, 518, 632, 1109, 1190, 1449, 1822
HspAI GCGC 2 cut(s) 1456, 1853
KpnI GGTACC 1 cut(s) 1203
Kzo9I GATC 7 cut(s) 291, 473, 562, 929, 1604, 1666, 1890
LmnI GCTCC 2 cut(s) 206, 1484
Lsp1109I GCAGC 5 cut(s) 32, 527, 826, 1090, 1979
LweI GCATC 4 cut(s) 247, 1636, 1840, 1910
MaeII ACGT 2 cut(s) 1710, 1945
MaeIII GTNAC 6 cut(s) 164, 280, 311, 1547, 1706, 1996
MalI GATC 7 cut(s) 293, 475, 564, 931, 1606, 1668, 1892
MboI GATC 7 cut(s) 291, 473, 562, 929, 1604, 1666, 1890
MboII GAAGA 6 cut(s) 468, 619, 967, 1235, 1835, 1898
MfeI CAATTG 1 cut(s) 441
MflI RGATCY 4 cut(s) 473, 929, 1604, 1666
MhlI GDGCHC 2 cut(s) 1489, 1743
MlsI TGGCCA 1 cut(s) 1185
MluNI TGGCCA 1 cut(s) 1185
MlyI GAGTC 3 cut(s) 695, 922, 1823
MmeI TCCRAC 4 cut(s) 92, 1200, 1258, 1973
MnlI CCTC 8 cut(s) 231, 238, 343, 754, 756, 989, 1262, 1972
Mox20I TGGCCA 1 cut(s) 1185
Mph1103I ATGCAT 2 cut(s) 240, 634
MroXI GAANNNNTTC 2 cut(s) 798, 1405
MscI TGGCCA 1 cut(s) 1185
MseI TTAA 7 cut(s) 171, 1053, 1119, 1164, 1290, 1572, 1745
MslI CAYNNNNRTG 2 cut(s) 1326, 1428
Msp20I TGGCCA 1 cut(s) 1185
MspI CCGG 4 cut(s) 207, 638, 683, 1095
MspR9I CCNGG 6 cut(s) 102, 320, 638, 647, 1559, 1671
MunI CAATTG 1 cut(s) 441
Mva1269I GAATGC 2 cut(s) 632, 1501
MvaI CCWGG 5 cut(s) 102, 320, 647, 1559, 1671
MvnI CGCG 1 cut(s) 1855
MwoI GCNNNNNNNGC 6 cut(s) 207, 315, 852, 957, 1583, 1910
NciI CCSGG 1 cut(s) 638
NcoI CCATGG 2 cut(s) 1186, 1818
NdeII GATC 7 cut(s) 291, 473, 562, 929, 1604, 1666, 1890
NlaIII CATG 8 cut(s) 94, 238, 518, 632, 1109, 1190, 1449, 1822
NlaIV GGNNCC 2 cut(s) 182, 1201
NmuCI GTSAC 2 cut(s) 280, 1706
NsiI ATGCAT 2 cut(s) 240, 634
NspI RCATGY 1 cut(s) 238
PaeI GCATGC 1 cut(s) 238
PceI AGGCCT 1 cut(s) 960
PctI GAATGC 2 cut(s) 632, 1501
PdmI GAANNNNTTC 2 cut(s) 798, 1405
PflMI CCANNNNNTGG 1 cut(s) 446
PfoI TCCNGGA 2 cut(s) 1557, 1669
PkrI GCNGC 5 cut(s) 22, 542, 816, 1080, 1969
PleI GAGTC 3 cut(s) 695, 921, 1822
PpsI GAGTC 3 cut(s) 695, 921, 1822
PshBI ATTAAT 1 cut(s) 1290
Psp124BI GAGCTC 2 cut(s) 1489, 1743
Psp6I CCWGG 5 cut(s) 100, 318, 645, 1557, 1669
PspGI CCWGG 5 cut(s) 100, 318, 645, 1557, 1669
PspN4I GGNNCC 2 cut(s) 182, 1201
PspPI GGNCC 1 cut(s) 1729
PsrI GAACNNNNNNTAC 2 cut(s) 1161, 1193
PsuI RGATCY 4 cut(s) 473, 929, 1604, 1666
RsaI GTAC 7 cut(s) 58, 64, 87, 496, 532, 832, 1201
RsaNI GTAC 7 cut(s) 57, 63, 86, 495, 531, 831, 1200
RseI CAYNNNNRTG 2 cut(s) 1326, 1428
SacI GAGCTC 2 cut(s) 1489, 1743
SaqAI TTAA 7 cut(s) 171, 1053, 1119, 1164, 1290, 1572, 1745
SatI GCNGC 5 cut(s) 21, 541, 815, 1079, 1968
Sau3AI GATC 7 cut(s) 291, 473, 562, 929, 1604, 1666, 1890
Sau96I GGNCC 1 cut(s) 1729
ScaI AGTACT 4 cut(s) 58, 64, 496, 832
SchI GAGTC 3 cut(s) 695, 922, 1823
ScrFI CCNGG 6 cut(s) 102, 320, 638, 647, 1559, 1671
SduI GDGCHC 2 cut(s) 1489, 1743
SfaNI GCATC 4 cut(s) 247, 1636, 1840, 1910
SfcI CTRYAG 1 cut(s) 711
SgrAI CRCCGGYG 1 cut(s) 1094
SinI GGWCC 1 cut(s) 1729
SmiMI CAYNNNNRTG 2 cut(s) 1326, 1428
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
SpeI ACTAGT 4 cut(s) 59, 581, 1639, 2000
SphI GCATGC 1 cut(s) 238
SseBI AGGCCT 1 cut(s) 960
SsiI CCGC 3 cut(s) 120, 557, 1370
SspI AATATT 1 cut(s) 696
SstI GAGCTC 2 cut(s) 1489, 1743
StuI AGGCCT 1 cut(s) 960
StyD4I CCNGG 6 cut(s) 100, 318, 636, 645, 1557, 1669
StyI CCWWGG 4 cut(s) 961, 1134, 1186, 1818
TaaI ACNGT 7 cut(s) 27, 37, 127, 996, 1074, 1204, 1992
TaiI ACGT 2 cut(s) 1713, 1948
TaqI TCGA 3 cut(s) 835, 1531, 1861
TatI WGTACW 4 cut(s) 56, 62, 494, 830
Tru1I TTAA 7 cut(s) 171, 1053, 1119, 1164, 1290, 1572, 1745
Tru9I TTAA 7 cut(s) 171, 1053, 1119, 1164, 1290, 1572, 1745
TscAI CASTG 3 cut(s) 30, 532, 794
TseFI GTSAC 2 cut(s) 280, 1706
TseI GCWGC 5 cut(s) 20, 540, 814, 1078, 1967
Tsp45I GTSAC 2 cut(s) 280, 1706
TspDTI ATGAA 9 cut(s) 414, 1276, 1308, 1378, 1409, 1494, 1798, 1883, 1970
TspGWI ACGGA 3 cut(s) 447, 486, 1712
TspRI CASTG 3 cut(s) 30, 532, 794
Van91I CCANNNNNTGG 1 cut(s) 446
VpaK11BI GGWCC 1 cut(s) 1729
VspI ATTAAT 1 cut(s) 1290
XagI CCTNNNNNAGG 1 cut(s) 758
XapI RAATTY 4 cut(s) 132, 798, 1385, 1983
XbaI TCTAGA 1 cut(s) 1663
XceI RCATGY 1 cut(s) 238
XcmI CCANNNNNNNNNTGG 2 cut(s) 1782, 1921
XmiI GTMKAC 1 cut(s) 642
XmnI GAANNNNTTC 2 cut(s) 798, 1405
ZrmI AGTACT 4 cut(s) 58, 64, 496, 832
Zsp2I ATGCAT 2 cut(s) 240, 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.