Rh2DG524300

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
74973531 .. 74989668
16138 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG524300.1

Sequence Viewer

Length: 2382 bp
ATGGCAGTAATATTATTGCAATTGCTAGTTCATATCACCCTTCTATTAATGTTCTGGTCAACAAGTGTTATGGCAACATCATCATTCTCAGAATTAGCATGGCCGATAGCAAAGCCTAATTGTGAAACTCATTGCGGAAATATTAGCATCCCATATCCTTTCGGGATCGGACCTAACAAAGATTGTTACTTCGACGAATGGTTTGAAATAGAGTGCGCCAACAACTCAACAGGTCCTCACAAGCCTTTCTTGAAGCGCACACAGCCGAAGCTAGAGGTGCTGAATATTTCAACGGAAGGCACGCTTCTAATTAACAACCCGGGCACTTACTTCTACGAAAGAAACAGATCTCGGCAATTGGCCCCGAATTTGACAGGAGGCCCTTTCATATATTCACAGACACACAACAGATTCACTGCAATGAGTTGCGGATTCTCGGCGCTGGTAATGTCAGAGCATGACGAGCGTATTCTTGGTGGGTGCTTTTCATCTTGTGGTGATGAAAGTCATGAAACAAAAAATTATGATTGTATTAATGGTATTAAATGCTGCCAGGCTACTCTCCCTGGATCATATCCCACTTCGATCACTTCAAAGATACAATATTTTGAAATTGATGAAGAATTGTCGACTTCTTACTACTACGCCTTACTGGCCGAGCAAACAAAGAAAATTAATTTTTCGGATGTGTTGGAAAACATAAAGACAGGCAAGGATATAGAGGCGTGCATGTTTCCTGTGGTTCTTGATTGGCGCATAAGATTACATGAACTTTCATCATATTTCGCAATATTTAAAGGGTTCATTGGATCACACACGAGCAATAATGACTCAAAACCCTATTGCGAGGCTGGTTGGTCGTATGATGGGGATGGGGTCGAATGCAGCTGCGTCTGCCCACTGGGTTTTGAAGGAAATCCTTATCTTCTCCAACCTTGTCAAGATATTGATGAATGCAAGGGGAGTAATCAGTGCGTGACTCAAGGAGAAACATGTGAGAATTTTGTTGGGGGGTACAAATGCTATTCAAAAGTAACTGGCGCTACGTGTGAATACTCTGCTGATCGTTATGGTACAGCTATTACGTTATGCCACATGAATAGCAGTCCCTTTGCTAGGGCCGATAATATCAGAATCAGAACTATTCTTCTAGGTCTTGGTGCGGGTGTCGGGCTATTGCTACTACTTATTGGTACATGGTTGGTGTACAAAGTGGTCAAGAAAAGGAAAAAGATTCAGCGCAGGCAAATATACTTCAAACGAAATGGCGGTTTATTGTTAGAACAACAATTGTCGTCAGGTGAAGTTAATGTTGAGAAAATTAAGTTGTTCAAGTCAAAGGAATTAGCAAAGTCTACAGATAGTTACAATAATGATAGAATTCTTGGTCAAGGAGCTCAAGGTATTGTTTATAAAGGAATGTTGGCAGATGGAAGAATTGTTGCTGTGAAAAAGTCGAAAATAGTCAATGAAGGAAAGCTTTCAGAATTCATCAATGAGGTTGTCATTCTTTCACAAATCAACCATAGAAATGTGGTTCAACTGTTGGGATGTTGTTTAGAGACGGAAGTTCCTATGTTAGTTTATGAATTCATACCGAACGGAACACTTTCGCGGTACATCCATGAACAAAATGAGGAATTTCCACTTACATGGAAAATGCGCTTACGACTTGCTACAGAAATTGCTGGAGCTCTTTCTTATTTACATTGTGCAGCTTCATTTCCCATTTATCACAGAGACATTAAGTCTTCAAACATACTCTTAGATGAGAAATACAGAGCAAAAGTTGCTGACTTTGGAACTTCAAGATCAATTGCCATTGACCAGACTCACCTAACAACACTTGTACACGGCACATTTGGCTACTTGGACCCTGAATACTTCCAGTCAAGTCAGTTTACGGACAAAAGTGACGTGTATAGTTTTGGAGTTGTCCTTGTTGAGCTCTTGACCGGTCGAAAACCAATTTCTGCAATAACAAGGCCACAAGAAGAAACAAGGCCACAAGAAGAAGAATATAGAAGTCTTGCCACTAATTTCATTGTTTCAATGCAGAAAAATATTCTATCTGACATTCTCGACGCACGAGTTAGGAAGGAGGGCAAAGAAACAGAGATTAGGGTAGTTTCCAACCTTGCACGAAGATGCTTGGAATTACATGGAAGAAATCGCCCTACAATGAGAGAGGTCACAATAGAGTTGGCAGCTATCCAAATGATGGGCGAAAATGTTCAAAATGAAGAACGTGTTGAATATTCAGAATATGACTCTGCTAAGCGTTGGGATGTTGTTTCAAGCACAACTGATCAGTCAGCTTCTTATGGTGGTCCGACTTCATCCTCACTGGAGCGTCAACAATTAACCGCTAAGACCTGGTGA

Protein Analysis

793

Amino Acids

89.27

Weight (kDa)

6.21

Isoelectric Point (pI)

41.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 41 - 101 3.1e-12 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 456 - 731 2.6e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 459 - 733 7.7e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1413
AccB7I CCANNNNNTGG 1 cut(s) 2221
AccI GTMKAC 2 cut(s) 629, 1355
AccII CGCG 1 cut(s) 1615
AciI CCGC 6 cut(s) 135, 429, 1163, 1269, 1615, 2367
AclWI GGATC 3 cut(s) 173, 577, 817
AcoI YGGCCR 2 cut(s) 101, 654
AcsI RAATTY 6 cut(s) 367, 1000, 1380, 1487, 1589, 1640
AfaI GTAC 6 cut(s) 1016, 1075, 1195, 1208, 1619, 1851
AfiI CCNNNNNNNGG 2 cut(s) 1116, 2221
AflIII ACRYGT 4 cut(s) 992, 1046, 1917, 2248
AgeI ACCGGT 1 cut(s) 1955
AhdI GACNNNNNGTC 1 cut(s) 1747
AjiI CACGTC 1 cut(s) 1918
AjnI CCWGG 3 cut(s) 552, 565, 2375
Alw21I GWGCWC 3 cut(s) 1399, 1696, 1950
Alw26I GTCTC 2 cut(s) 1556, 1734
AlwI GGATC 3 cut(s) 173, 577, 817
Ama87I CYCGRG 1 cut(s) 319
AoxI GGCC 7 cut(s) 101, 360, 379, 654, 1119, 1985, 2003
ApeKI GCWGC 5 cut(s) 549, 885, 888, 1715, 2207
ApoI RAATTY 6 cut(s) 367, 1000, 1380, 1487, 1589, 1640
ArsI GACNNNNNNTTYG 2 cut(s) 185, 217
AseI ATTAAT 3 cut(s) 47, 534, 675
AsiGI ACCGGT 1 cut(s) 1955
Asp700I GAANNNNTTC 3 cut(s) 1480, 1609, 2232
AspLEI GCGC 7 cut(s) 218, 258, 442, 756, 1043, 1242, 1665
AspS9I GGNCC 7 cut(s) 170, 233, 361, 380, 1119, 1873, 2330
AsuC2I CCSGG 2 cut(s) 320, 321
AsuHPI GGTGA 4 cut(s) 28, 509, 1313, 1826
AvaI CYCGRG 1 cut(s) 319
AvaII GGWCC 4 cut(s) 170, 233, 1873, 2330
BaeGI GKGCMC 1 cut(s) 326
BanII GRGCYC 3 cut(s) 1399, 1696, 1950
BauI CACGAG 2 cut(s) 817, 2088
BbsI GAAGAC 1 cut(s) 1743
Bbv12I GWGCWC 3 cut(s) 1399, 1696, 1950
BbvI GCAGC 5 cut(s) 536, 875, 897, 1727, 2219
BccI CCATC 4 cut(s) 860, 866, 1424, 2215
BceAI ACGGC 1 cut(s) 1870
BciT130I CCWGG 3 cut(s) 554, 567, 2377
BclI TGATCA 1 cut(s) 2308
BcnI CCSGG 2 cut(s) 320, 321
BcoDI GTCTC 2 cut(s) 1556, 1734
BfaI CTAG 4 cut(s) 26, 272, 1116, 1151
BfmI CTRYAG 2 cut(s) 1356, 1677
BfoI RGCGCY 2 cut(s) 443, 1044
BglI GCCNNNNNGGC 1 cut(s) 653
BglII AGATCT 1 cut(s) 347
BisI GCNGC 5 cut(s) 550, 886, 889, 1716, 2208
BlpI GCTNAGC 1 cut(s) 2277
BlsI GCNGC 5 cut(s) 551, 887, 890, 1717, 2209
Bme1390I CCNGG 5 cut(s) 320, 321, 554, 567, 2377
Bme18I GGWCC 4 cut(s) 170, 233, 1873, 2330
BmeRI GACNNNNNGTC 1 cut(s) 1747
BmeT110I CYCGRG 1 cut(s) 319
BmgBI CACGTC 1 cut(s) 1918
BmgT120I GGNCC 7 cut(s) 170, 233, 361, 380, 1119, 1873, 2330
BmiI GGNNCC 2 cut(s) 363, 1875
BmrFI CCNGG 5 cut(s) 320, 321, 554, 567, 2377
BmrI ACTGGG 1 cut(s) 911
BmsI GCATC 2 cut(s) 156, 2138
BmuI ACTGGG 1 cut(s) 911
BpiI GAAGAC 1 cut(s) 1743
BpmI CTGGAG 2 cut(s) 1710, 2369
Bpu1102I GCTNAGC 1 cut(s) 2277
BpuEI CTTGAG 2 cut(s) 966, 1383
BpuMI CCSGG 2 cut(s) 320, 321
BsaAI YACGTR 1 cut(s) 1047
BsaJI CCNNGG 2 cut(s) 319, 565
BsaWI WCCGGW 1 cut(s) 1955
Bsc4I CCNNNNNNNGG 2 cut(s) 1116, 2221
Bse118I RCCGGY 1 cut(s) 1955
Bse1I ACTGG 5 cut(s) 657, 906, 1042, 1888, 2352
Bse3DI GCAATG 2 cut(s) 130, 426
BseBI CCWGG 3 cut(s) 554, 567, 2377
BseDI CCNNGG 2 cut(s) 319, 565
BseGI GGATG 7 cut(s) 147, 691, 877, 1556, 1620, 2293, 2339
BseLI CCNNNNNNNGG 2 cut(s) 1116, 2221
BseMI GCAATG 2 cut(s) 130, 426
BseMII CTCAG 1 cut(s) 102
BseNI ACTGG 5 cut(s) 657, 906, 1042, 1888, 2352
BseSI GKGCMC 1 cut(s) 326
BseXI GCAGC 5 cut(s) 536, 875, 897, 1727, 2219
BsgI GTGCAG 1 cut(s) 1734
Bsh1236I CGCG 1 cut(s) 1615
Bsh1285I CGRYCG 1 cut(s) 1960
BshFI GGCC 7 cut(s) 103, 362, 381, 656, 1121, 1987, 2005
BshTI ACCGGT 1 cut(s) 1955
BsiEI CGRYCG 1 cut(s) 1960
BsiHKAI GWGCWC 3 cut(s) 1399, 1696, 1950
BsiHKCI CYCGRG 1 cut(s) 319
BsiSI CCGG 2 cut(s) 320, 1956
BslFI GGGAC 1 cut(s) 1092
BslI CCNNNNNNNGG 2 cut(s) 1116, 2221
BsmAI GTCTC 2 cut(s) 1556, 1734
BsmBI CGTCTC 1 cut(s) 1556
BsmFI GGGAC 1 cut(s) 1092
BsmI GAATGC 2 cut(s) 887, 959
BsnI GGCC 7 cut(s) 103, 362, 381, 656, 1121, 1987, 2005
BsoBI CYCGRG 1 cut(s) 319
Bsp1286I GDGCHC 4 cut(s) 326, 1399, 1696, 1950
Bsp1407I TGTACA 2 cut(s) 1206, 1849
Bsp143I GATC 8 cut(s) 165, 347, 569, 585, 809, 1063, 1811, 2308
Bsp1720I GCTNAGC 1 cut(s) 2277
BspACI CCGC 6 cut(s) 135, 429, 1163, 1269, 1615, 2367
BspANI GGCC 7 cut(s) 103, 362, 381, 656, 1121, 1987, 2005
BspCNI CTCAG 1 cut(s) 101
BspFNI CGCG 1 cut(s) 1615
BspHI TCATGA 1 cut(s) 508
BspLI GGNNCC 2 cut(s) 363, 1875
BspPI GGATC 3 cut(s) 173, 577, 817
BsrDI GCAATG 2 cut(s) 130, 426
BsrFI RCCGGY 1 cut(s) 1955
BsrGI TGTACA 2 cut(s) 1206, 1849
BsrI ACTGG 5 cut(s) 657, 906, 1042, 1888, 2352
BssAI RCCGGY 1 cut(s) 1955
BssECI CCNNGG 2 cut(s) 319, 565
BssMI GATC 8 cut(s) 165, 347, 569, 585, 809, 1063, 1811, 2308
BssSI CACGAG 2 cut(s) 817, 2088
Bst2BI CACGAG 2 cut(s) 817, 2088
Bst2UI CCWGG 3 cut(s) 554, 567, 2377
Bst4CI ACNGT 1 cut(s) 1545
BstAPI GCANNNNNTGC 1 cut(s) 1790
BstAUI TGTACA 2 cut(s) 1206, 1849
BstBAI YACGTR 1 cut(s) 1047
BstC8I GCNNGC 3 cut(s) 302, 727, 1244
BstDEI CTNAG 4 cut(s) 88, 1765, 2277, 2370
BstENI CCTNNNNNAGG 1 cut(s) 1114
BstF5I GGATG 7 cut(s) 147, 691, 877, 1556, 1620, 2293, 2339
BstFNI CGCG 1 cut(s) 1615
BstH2I RGCGCY 2 cut(s) 443, 1044
BstHHI GCGC 7 cut(s) 218, 258, 442, 756, 1043, 1242, 1665
BstKTI GATC 8 cut(s) 168, 350, 572, 588, 812, 1066, 1814, 2311
BstMAI GTCTC 2 cut(s) 1556, 1734
BstMBI GATC 8 cut(s) 165, 347, 569, 585, 809, 1063, 1811, 2308
BstMCI CGRYCG 1 cut(s) 1960
BstMWI GCNNNNNNNGC 7 cut(s) 262, 277, 463, 653, 894, 1790, 1863
BstNI CCWGG 3 cut(s) 554, 567, 2377
BstNSI RCATGY 2 cut(s) 733, 996
BstSCI CCNGG 5 cut(s) 318, 319, 552, 565, 2375
BstSFI CTRYAG 2 cut(s) 1356, 1677
BstSLI GKGCMC 1 cut(s) 326
BstUI CGCG 1 cut(s) 1615
BstV1I GCAGC 5 cut(s) 536, 875, 897, 1727, 2219
BstV2I GAAGAC 1 cut(s) 1743
BstX2I RGATCY 1 cut(s) 347
BstXI CCANNNNNNTGG 1 cut(s) 1653
BstYI RGATCY 1 cut(s) 347
BsuRI GGCC 7 cut(s) 103, 362, 381, 656, 1121, 1987, 2005
BtrI CACGTC 1 cut(s) 1918
BtsCI GGATG 7 cut(s) 147, 691, 877, 1556, 1620, 2293, 2339
BtsI GCAGTG 1 cut(s) 414
BtsIMutI CAGTG 4 cut(s) 414, 899, 977, 2345
Cac8I GCNNGC 3 cut(s) 302, 727, 1244
CciI TCATGA 1 cut(s) 508
CfoI GCGC 7 cut(s) 218, 258, 442, 756, 1043, 1242, 1665
Cfr10I RCCGGY 1 cut(s) 1955
Cfr13I GGNCC 7 cut(s) 170, 233, 361, 380, 1119, 1873, 2330
Cfr9I CCCGGG 1 cut(s) 319
CseI GACGC 3 cut(s) 880, 2093, 2342
CsiI ACCWGGT 1 cut(s) 2375
Csp6I GTAC 6 cut(s) 1015, 1074, 1194, 1207, 1618, 1850
CspAI ACCGGT 1 cut(s) 1955
CviQI GTAC 6 cut(s) 1015, 1074, 1194, 1207, 1618, 1850
DdeI CTNAG 4 cut(s) 88, 1765, 2277, 2370
DpnI GATC 8 cut(s) 167, 349, 571, 587, 811, 1065, 1813, 2310
DpnII GATC 8 cut(s) 165, 347, 569, 585, 809, 1063, 1811, 2308
DraI TTTAAA 1 cut(s) 796
DriI GACNNNNNGTC 1 cut(s) 1747
EaeI YGGCCR 2 cut(s) 101, 654
Eam1105I GACNNNNNGTC 1 cut(s) 1747
Ecl136II GAGCTC 3 cut(s) 1397, 1694, 1948
Eco24I GRGCYC 3 cut(s) 1399, 1696, 1950
Eco47I GGWCC 4 cut(s) 170, 233, 1873, 2330
Eco53kI GAGCTC 3 cut(s) 1397, 1694, 1948
Eco88I CYCGRG 1 cut(s) 319
EcoICRI GAGCTC 3 cut(s) 1397, 1694, 1948
EcoNI CCTNNNNNAGG 1 cut(s) 1114
EcoO109I RGGNCCY 2 cut(s) 233, 380
EcoRI GAATTC 3 cut(s) 1380, 1487, 1589
EcoRII CCWGG 3 cut(s) 552, 565, 2375
EcoT38I GRGCYC 3 cut(s) 1399, 1696, 1950
Esp3I CGTCTC 1 cut(s) 1556
FalI AAGNNNNNCTT 6 cut(s) 233, 265, 288, 320, 1464, 1496
FaqI GGGAC 1 cut(s) 1092
FauI CCCGC 1 cut(s) 1156
FbaI TGATCA 1 cut(s) 2308
FblI GTMKAC 2 cut(s) 629, 1355
Fnu4HI GCNGC 5 cut(s) 550, 886, 889, 1716, 2208
FokI GGATG 7 cut(s) 134, 698, 884, 1563, 1607, 2300, 2326
FriOI GRGCYC 3 cut(s) 1399, 1696, 1950
Fsp4HI GCNGC 5 cut(s) 550, 886, 889, 1716, 2208
FspBI CTAG 4 cut(s) 26, 272, 1116, 1151
GlaI GCGC 7 cut(s) 217, 257, 441, 755, 1042, 1241, 1664
GluI GCNGC 5 cut(s) 550, 886, 889, 1716, 2208
GsuI CTGGAG 2 cut(s) 1710, 2369
HaeII RGCGCY 2 cut(s) 443, 1044
HaeIII GGCC 7 cut(s) 103, 362, 381, 656, 1121, 1987, 2005
HapII CCGG 2 cut(s) 320, 1956
HgaI GACGC 3 cut(s) 880, 2093, 2342
HhaI GCGC 7 cut(s) 218, 258, 442, 756, 1043, 1242, 1665
Hin6I GCGC 7 cut(s) 216, 256, 440, 754, 1041, 1240, 1663
HinP1I GCGC 7 cut(s) 216, 256, 440, 754, 1041, 1240, 1663
HincII GTYRAC 3 cut(s) 60, 630, 2357
HindII GTYRAC 3 cut(s) 60, 630, 2357
HindIII AAGCTT 1 cut(s) 1478
HinfI GANTC 8 cut(s) 411, 432, 830, 979, 1134, 1234, 1831, 2270
HpaII CCGG 2 cut(s) 320, 1956
HphI GGTGA 4 cut(s) 28, 509, 1313, 1826
Hpy166II GTNNAC 7 cut(s) 60, 630, 1207, 1356, 1852, 1902, 2357
Hpy188III TCNNGA 9 cut(s) 163, 250, 509, 746, 941, 1219, 1809, 1951, 2081
Hpy8I GTNNAC 7 cut(s) 60, 630, 1207, 1356, 1852, 1902, 2357
Hpy99I CGWCG 2 cut(s) 197, 2087
HpyAV CCTTC 5 cut(s) 50, 290, 905, 1466, 2092
HpyCH4III ACNGT 1 cut(s) 1545
HpyCH4IV ACGT 4 cut(s) 1046, 1085, 1917, 2248
HpyCH4V TGCA 9 cut(s) 19, 419, 729, 885, 957, 1715, 1976, 2056, 2141
HpyF10VI GCNNNNNNNGC 7 cut(s) 262, 277, 463, 653, 894, 1790, 1863
HpyF3I CTNAG 4 cut(s) 88, 1765, 2277, 2370
HpySE526I ACGT 4 cut(s) 1046, 1085, 1917, 2248
HspAI GCGC 7 cut(s) 216, 256, 440, 754, 1041, 1240, 1663
Ksp22I TGATCA 1 cut(s) 2308
Kzo9I GATC 8 cut(s) 165, 347, 569, 585, 809, 1063, 1811, 2308
LmnI GCTCC 3 cut(s) 1394, 1691, 2350
Lsp1109I GCAGC 5 cut(s) 536, 875, 897, 1727, 2219
LweI GCATC 2 cut(s) 156, 2138
MabI ACCWGGT 1 cut(s) 2375
MaeI CTAG 4 cut(s) 26, 272, 1116, 1151
MaeII ACGT 4 cut(s) 1046, 1085, 1917, 2248
MaeIII GTNAC 6 cut(s) 185, 976, 1033, 1364, 1913, 2191
MalI GATC 8 cut(s) 167, 349, 571, 587, 811, 1065, 1813, 2310
MboI GATC 8 cut(s) 165, 347, 569, 585, 809, 1063, 1811, 2308
MfeI CAATTG 4 cut(s) 20, 356, 1289, 1815
MflI RGATCY 1 cut(s) 347
MhlI GDGCHC 4 cut(s) 326, 1399, 1696, 1950
MlyI GAGTC 4 cut(s) 824, 973, 1825, 2264
MmeI TCCRAC 4 cut(s) 672, 955, 2157, 2357
MroXI GAANNNNTTC 3 cut(s) 1480, 1609, 2232
MslI CAYNNNNRTG 4 cut(s) 419, 1530, 1651, 2146
MspA1I CMGCKG 1 cut(s) 888
MspI CCGG 2 cut(s) 320, 1956
MspR9I CCNGG 5 cut(s) 320, 321, 554, 567, 2377
MunI CAATTG 4 cut(s) 20, 356, 1289, 1815
Mva1269I GAATGC 2 cut(s) 887, 959
MvaI CCWGG 3 cut(s) 554, 567, 2377
MvnI CGCG 1 cut(s) 1615
MwoI GCNNNNNNNGC 7 cut(s) 262, 277, 463, 653, 894, 1790, 1863
NciI CCSGG 2 cut(s) 320, 321
NdeII GATC 8 cut(s) 165, 347, 569, 585, 809, 1063, 1811, 2308
NlaIV GGNNCC 2 cut(s) 363, 1875
NmeAIII GCCGAG 3 cut(s) 331, 416, 682
NmuCI GTSAC 3 cut(s) 976, 1913, 2191
NspI RCATGY 2 cut(s) 733, 996
PagI TCATGA 1 cut(s) 508
PciI ACATGT 1 cut(s) 992
PctI GAATGC 2 cut(s) 887, 959
PdmI GAANNNNTTC 3 cut(s) 1480, 1609, 2232
PfeI GAWTC 4 cut(s) 411, 432, 1134, 1234
PflMI CCANNNNNTGG 1 cut(s) 2221
PinAI ACCGGT 1 cut(s) 1955
PkrI GCNGC 5 cut(s) 551, 887, 890, 1717, 2209
PleI GAGTC 4 cut(s) 824, 973, 1825, 2264
PpsI GAGTC 4 cut(s) 824, 973, 1825, 2264
Ppu21I YACGTR 1 cut(s) 1047
PpuMI RGGWCCY 1 cut(s) 233
PscI ACATGT 1 cut(s) 992
PshBI ATTAAT 3 cut(s) 47, 534, 675
PsiI TTATAA 1 cut(s) 1413
Psp124BI GAGCTC 3 cut(s) 1399, 1696, 1950
Psp5II RGGWCCY 1 cut(s) 233
Psp6I CCWGG 3 cut(s) 552, 565, 2375
PspGI CCWGG 3 cut(s) 552, 565, 2375
PspN4I GGNNCC 2 cut(s) 363, 1875
PspPI GGNCC 7 cut(s) 170, 233, 361, 380, 1119, 1873, 2330
PspPPI RGGWCCY 1 cut(s) 233
PsuI RGATCY 1 cut(s) 347
PvuII CAGCTG 1 cut(s) 888
RsaI GTAC 6 cut(s) 1016, 1075, 1195, 1208, 1619, 1851
RsaNI GTAC 6 cut(s) 1015, 1074, 1194, 1207, 1618, 1850
RseI CAYNNNNRTG 4 cut(s) 419, 1530, 1651, 2146
SacI GAGCTC 3 cut(s) 1399, 1696, 1950
SalI GTCGAC 1 cut(s) 628
SatI GCNGC 5 cut(s) 550, 886, 889, 1716, 2208
Sau3AI GATC 8 cut(s) 165, 347, 569, 585, 809, 1063, 1811, 2308
Sau96I GGNCC 7 cut(s) 170, 233, 361, 380, 1119, 1873, 2330
SchI GAGTC 4 cut(s) 824, 973, 1825, 2264
ScrFI CCNGG 5 cut(s) 320, 321, 554, 567, 2377
SduI GDGCHC 4 cut(s) 326, 1399, 1696, 1950
SexAI ACCWGGT 1 cut(s) 2375
SfaNI GCATC 2 cut(s) 156, 2138
SfcI CTRYAG 2 cut(s) 1356, 1677
SinI GGWCC 4 cut(s) 170, 233, 1873, 2330
SmaI CCCGGG 1 cut(s) 321
SmiMI CAYNNNNRTG 4 cut(s) 419, 1530, 1651, 2146
SmlI CTYRAG 2 cut(s) 981, 1398
SmoI CTYRAG 2 cut(s) 981, 1398
SsiI CCGC 6 cut(s) 135, 429, 1163, 1269, 1615, 2367
SspI AATATT 7 cut(s) 12, 142, 286, 605, 792, 2065, 2258
SspMI CTAG 4 cut(s) 26, 272, 1116, 1151
SstI GAGCTC 3 cut(s) 1399, 1696, 1950
StyD4I CCNGG 5 cut(s) 318, 319, 552, 565, 2375
TaaI ACNGT 1 cut(s) 1545
TaiI ACGT 4 cut(s) 1049, 1088, 1920, 2251
TaqI TCGA 7 cut(s) 192, 584, 629, 879, 1457, 1960, 2082
TatI WGTACW 2 cut(s) 1206, 1849
TfiI GAWTC 4 cut(s) 411, 432, 1134, 1234
TscAI CASTG 4 cut(s) 421, 906, 977, 2352
TseFI GTSAC 3 cut(s) 976, 1913, 2191
TseI GCWGC 5 cut(s) 549, 885, 888, 1715, 2207
Tsp45I GTSAC 3 cut(s) 976, 1913, 2191
TspGWI ACGGA 4 cut(s) 308, 1580, 1617, 1919
TspMI CCCGGG 1 cut(s) 319
TspRI CASTG 4 cut(s) 421, 906, 977, 2352
Van91I CCANNNNNTGG 1 cut(s) 2221
VpaK11BI GGWCC 4 cut(s) 170, 233, 1873, 2330
VspI ATTAAT 3 cut(s) 47, 534, 675
XagI CCTNNNNNAGG 1 cut(s) 1114
XapI RAATTY 6 cut(s) 367, 1000, 1380, 1487, 1589, 1640
XceI RCATGY 2 cut(s) 733, 996
XmaI CCCGGG 1 cut(s) 319
XmiI GTMKAC 2 cut(s) 629, 1355
XmnI GAANNNNTTC 3 cut(s) 1480, 1609, 2232
XspI CTAG 4 cut(s) 26, 272, 1116, 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.