Rw0G004870

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00186
Physical Location & Seq
Reverse (-)
20599 .. 23137
2539 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G004870.1

Sequence Viewer

Length: 2034 bp
ATGGCTGTCCAGTTGCGAGTATTAATGGAGTTTACTCTGTTCTTATGGTGTGTGACTATGAGTCATGCAATATTAGCAGAGGCAGCATCATTATTAGAAGCACCACCAATAGCAAAGCCTAATTGTCAATCACATTGTGGAGATGTTGAAATCCCATACCCTTTTGGAATTGGAGAAGGGTGTTATGACAGTAAGGGTAGTAATGGCGCATTCCAAATAAGCTGTGAAAACTCTACTGGCAAGTCCAAACCTTTCATGAACAGCACTGGTCTAGAGGTGTTGGAAATTTCTGTTGAAGGCACGCTAAGGGTCTTGGTCCCAATCACCTTCTCTAATTGCAGTGACAAGCCAAGTGATGGCCGGGCACCAAACTTGGAGATAGTTGGTTTTAAGTACTCCCAGAAGAACAGGTTCACTTCAATGAGTTGCGGGAGAGTAACCTTGATGTCGTCATATGGATTAACAATTGGTGGTTGCATGTCCATTTGTGGTAACTCTGATGCTGCACACAATAACTCCTGTGGTGGTATTAACTGTTGCCAGACGACCGTTCCTGAAAACCTTTATCAGTTCCTTATTGTGTTTGGAGATGTATTAAGGGCTTACGGTGGGGAGGCATGCAAGTATGCCTTCTTGGTAGAACAAAATTGGTTTACATCTTCAACAAATGTCTCTGCCATTGGTGAGAGCGACTCTGTCCCCGTAGTGATAGAATGGGATCCTTCAACAAGAAATTGGACGGATTATAACAACAACAGCACAGATTGCAGCAGTGGCAGACAATGTTTCTGCTCAAAGGGGTTTCATGGAAACCCCTATCTTACTGGTGGATGCAAAGATATCAATGAATGTGAAGATCCAGACCACCCCAATATATGTGGTGGTGCCAGCATTTGTATCAACTATCCTGTTGTCGGCAGTGTTCTTGGACTATTGCTTATACTCATTTGTGCATGGGGGTCACACAATGTCATAAAGAAAAGAAAAAACACTAAACGCAAGGAGAAGTTTTTTAAGCAGAATGGTGGTTTGCTGCTGGAGAAACAATCTTCTGGTGACGTTAATGTTGAGAAAATTAAATTGTTCAATTCCGAGGAGTTGGAGAAAGCCACAGATAATTATAATGCAAACAGAATTCTAGGTCAAGGAGGCCATGGAACTGTTTACAAGGGCATGCTCGCAGATGGAAGTATTGTGGCGATAAAGAAGTCTAAAATAGTTGATGAAGGAGAAGTTGAACAATTCATTAATGAAATTGTTATTCTTTCACAAATAATTCATAGGAATGTGGTTAAATTAATGGGTTGTTGTTTAGAGACCGAAGTTCCCCTTCTAGTTTATGAATTCATACCAAATGGAACTCTTTCTCAGTATATTCATCACCAGAATGAGGAGTTTCCTCTTACATGGAGACTCTTTCCTACTTACTCAGCAACTTCCTTTCCCATTTACCATCGAGATATCAAGACCTCCAACATACTCTTGGATGATAAATTTAGAGCTAAAGTTGCAGACTTTGGAACTTCCAGAACAGTTGCCATCGACAAAACACATCTTACCATGTCACAAGTTCAAGGAACATTTGGCTATTTAGACCCAGAGTACTTCCAGTCTAGCCAATTTACAGATAAGAGTGATGTTTATAGCTTTGGAGTGGTCCTTACGAGGCCAGAAGAGTGGAGAAGCCTGACAAATTATTTCCTTCTTTCAATGGAGGAGAATCGTCTGCTTGATATTCTTGATGCTCGAGTTATGAATGAAGGTGGCAAGGAGGAAATTATGGCAGTTGCACAGCTTGCAAGGCGTTGCTTGAATATGAAGGGAAAGAAGCGTCCTACTATGAAAGAAGTTGCAGTTCAATTGGAGGGAATATTTCAATTATCAGCAAAAGATTCTGACGTTCATACAAATTCAGCAGAGGTTGAATATGTCCTAAATGGATGGCATGTTGGTTCTACTTCAGCACGATATAACACAATCCATATTGGTAGTGGTTCTCCATCGGATGTAGAACCACTTATATATGTTTCTTGA

Protein Analysis

677

Amino Acids

74.82

Weight (kDa)

5.62

Isoelectric Point (pI)

37.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 42 - 104 3.7e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 374 - 617 9.3e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 377 - 621 5.3e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 747, 1122
AccB1I GGYRCC 2 cut(s) 364, 884
AccB7I CCANNNNNTGG 1 cut(s) 356
AciI CCGC 1 cut(s) 429
AclWI GGATC 3 cut(s) 713, 726, 851
AcoI YGGCCR 1 cut(s) 358
AcsI RAATTY 5 cut(s) 285, 1134, 1343, 1493, 1909
AcuI CTGAAG 1 cut(s) 1944
AdeI CACNNNGTG 1 cut(s) 137
AfaI GTAC 2 cut(s) 395, 1604
AfiI CCNNNNNNNGG 3 cut(s) 356, 914, 1390
AhdI GACNNNNNGTC 1 cut(s) 60
AluBI AGCT 4 cut(s) 222, 1502, 1647, 1795
AluI AGCT 4 cut(s) 222, 1502, 1647, 1795
Alw26I GTCTC 3 cut(s) 676, 1310, 1405
AlwI GGATC 3 cut(s) 713, 726, 851
Ama87I CYCGRG 1 cut(s) 1746
AoxI GGCC 3 cut(s) 358, 1150, 1667
ApeKI GCWGC 4 cut(s) 83, 503, 768, 1033
ApoI RAATTY 5 cut(s) 285, 1134, 1343, 1493, 1909
AseI ATTAAT 3 cut(s) 23, 1248, 1298
Asp700I GAANNNNTTC 2 cut(s) 410, 1363
AspLEI GCGC 1 cut(s) 209
AspS9I GGNCC 2 cut(s) 316, 1657
AsuC2I CCSGG 1 cut(s) 362
AsuHPI GGTGA 4 cut(s) 316, 695, 1067, 1373
AvaI CYCGRG 1 cut(s) 1746
AvaII GGWCC 2 cut(s) 316, 1657
BaeGI GKGCMC 1 cut(s) 367
BamHI GGATCC 1 cut(s) 718
BanI GGYRCC 2 cut(s) 364, 884
BbvI GCAGC 4 cut(s) 95, 490, 780, 1020
BccI CCATC 6 cut(s) 350, 1178, 1461, 1547, 1935, 2008
BcnI CCSGG 1 cut(s) 362
BcoDI GTCTC 3 cut(s) 676, 1310, 1405
BfaI CTAG 4 cut(s) 272, 1139, 1334, 1614
BisI GCNGC 4 cut(s) 84, 504, 769, 1034
BlsI GCNGC 4 cut(s) 85, 505, 770, 1035
BmcAI AGTACT 2 cut(s) 395, 1604
Bme1390I CCNGG 1 cut(s) 362
Bme18I GGWCC 2 cut(s) 316, 1657
BmeRI GACNNNNNGTC 1 cut(s) 60
BmeT110I CYCGRG 1 cut(s) 1746
BmgT120I GGNCC 2 cut(s) 316, 1657
BmiI GGNNCC 4 cut(s) 318, 366, 720, 886
BmrFI CCNGG 1 cut(s) 362
BmsI GCATC 4 cut(s) 95, 490, 821, 1732
BplI GAGNNNNNCTC 2 cut(s) 677, 709
BpmI CTGGAG 1 cut(s) 1058
Bpu10I CCTNAGC 1 cut(s) 305
BpuMI CCSGG 1 cut(s) 362
BsaI GGTCTC 1 cut(s) 1310
BsaJI CCNNGG 2 cut(s) 1092, 1153
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bsc4I CCNNNNNNNGG 3 cut(s) 356, 914, 1390
Bse1I ACTGG 5 cut(s) 10, 241, 271, 829, 1609
BseDI CCNNGG 2 cut(s) 1092, 1153
BseGI GGATG 4 cut(s) 836, 1492, 1946, 2011
BseLI CCNNNNNNNGG 3 cut(s) 356, 914, 1390
BseMII CTCAG 2 cut(s) 1382, 1443
BseNI ACTGG 5 cut(s) 10, 241, 271, 829, 1609
BseRI GAGGAG 3 cut(s) 1109, 1406, 1730
BseSI GKGCMC 1 cut(s) 367
BseXI GCAGC 4 cut(s) 95, 490, 780, 1020
BsgI GTGCAG 1 cut(s) 489
Bsh1285I CGRYCG 1 cut(s) 549
BshFI GGCC 3 cut(s) 360, 1152, 1669
BshNI GGYRCC 2 cut(s) 364, 884
BsiEI CGRYCG 1 cut(s) 549
BsiHKCI CYCGRG 1 cut(s) 1746
BsiSI CCGG 1 cut(s) 361
BslFI GGGAC 2 cut(s) 302, 683
BslI CCNNNNNNNGG 3 cut(s) 356, 914, 1390
BsmAI GTCTC 3 cut(s) 676, 1310, 1405
BsmFI GGGAC 2 cut(s) 302, 683
BsmI GAATGC 1 cut(s) 209
BsnI GGCC 3 cut(s) 360, 1152, 1669
Bso31I GGTCTC 1 cut(s) 1310
BsoBI CYCGRG 1 cut(s) 1746
Bsp1286I GDGCHC 1 cut(s) 367
Bsp143I GATC 2 cut(s) 718, 856
Bsp19I CCATGG 1 cut(s) 1153
BspACI CCGC 1 cut(s) 429
BspANI GGCC 3 cut(s) 360, 1152, 1669
BspCNI CTCAG 2 cut(s) 1381, 1442
BspHI TCATGA 1 cut(s) 255
BspLI GGNNCC 4 cut(s) 318, 366, 720, 886
BspPI GGATC 3 cut(s) 713, 726, 851
BspT107I GGYRCC 2 cut(s) 364, 884
BspTNI GGTCTC 1 cut(s) 1310
BsrI ACTGG 5 cut(s) 10, 241, 271, 829, 1609
BssECI CCNNGG 2 cut(s) 1092, 1153
BssMI GATC 2 cut(s) 718, 856
BssT1I CCWWGG 1 cut(s) 1153
Bst4CI ACNGT 6 cut(s) 191, 536, 550, 608, 1162, 1534
Bst6I CTCTTC 1 cut(s) 1668
BstAPI GCANNNNNTGC 2 cut(s) 765, 1796
BstC8I GCNNGC 6 cut(s) 302, 619, 889, 1175, 1179, 1797
BstDEI CTNAG 3 cut(s) 305, 1368, 1429
BstDSI CCRYGG 1 cut(s) 1153
BstF5I GGATG 4 cut(s) 836, 1492, 1946, 2011
BstHHI GCGC 1 cut(s) 209
BstKTI GATC 2 cut(s) 721, 859
BstMAI GTCTC 3 cut(s) 676, 1310, 1405
BstMBI GATC 2 cut(s) 718, 856
BstMCI CGRYCG 1 cut(s) 549
BstMWI GCNNNNNNNGC 7 cut(s) 74, 83, 765, 774, 1508, 1796, 1801
BstNSI RCATGY 4 cut(s) 481, 621, 1177, 1949
BstSCI CCNGG 1 cut(s) 360
BstSLI GKGCMC 1 cut(s) 367
BstV1I GCAGC 4 cut(s) 95, 490, 780, 1020
BstX2I RGATCY 2 cut(s) 718, 856
BstXI CCANNNNNNTGG 1 cut(s) 1677
BstYI RGATCY 2 cut(s) 718, 856
BsuRI GGCC 3 cut(s) 360, 1152, 1669
BtgI CCRYGG 1 cut(s) 1153
BtsCI GGATG 4 cut(s) 836, 1492, 1946, 2011
BtsI GCAGTG 3 cut(s) 346, 778, 925
BtsIMutI CAGTG 4 cut(s) 264, 346, 778, 925
Cac8I GCNNGC 6 cut(s) 302, 619, 889, 1175, 1179, 1797
CciI TCATGA 1 cut(s) 255
CfoI GCGC 1 cut(s) 209
Cfr13I GGNCC 2 cut(s) 316, 1657
CseI GACGC 1 cut(s) 1820
Csp6I GTAC 2 cut(s) 394, 1603
CspCI CAANNNNNGTGG 2 cut(s) 859, 894
CviQI GTAC 2 cut(s) 394, 1603
DdeI CTNAG 3 cut(s) 305, 1368, 1429
DpnI GATC 2 cut(s) 720, 858
DpnII GATC 2 cut(s) 718, 856
DraIII CACNNNGTG 1 cut(s) 137
DriI GACNNNNNGTC 1 cut(s) 60
EaeI YGGCCR 1 cut(s) 358
Eam1104I CTCTTC 1 cut(s) 1668
Eam1105I GACNNNNNGTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 1668
Eco130I CCWWGG 1 cut(s) 1153
Eco31I GGTCTC 1 cut(s) 1310
Eco32I GATATC 2 cut(s) 841, 1462
Eco47I GGWCC 2 cut(s) 316, 1657
Eco57I CTGAAG 1 cut(s) 1944
Eco88I CYCGRG 1 cut(s) 1746
EcoRI GAATTC 2 cut(s) 1134, 1343
EcoRV GATATC 2 cut(s) 841, 1462
EcoT14I CCWWGG 1 cut(s) 1153
ErhI CCWWGG 1 cut(s) 1153
FalI AAGNNNNNCTT 4 cut(s) 614, 646, 1314, 1346
FaqI GGGAC 2 cut(s) 302, 683
FauI CCCGC 1 cut(s) 422
FauNDI CATATG 1 cut(s) 454
Fnu4HI GCNGC 4 cut(s) 84, 504, 769, 1034
FokI GGATG 4 cut(s) 843, 1499, 1953, 2018
Fsp4HI GCNGC 4 cut(s) 84, 504, 769, 1034
FspBI CTAG 4 cut(s) 272, 1139, 1334, 1614
GlaI GCGC 1 cut(s) 208
GluI GCNGC 4 cut(s) 84, 504, 769, 1034
GsuI CTGGAG 1 cut(s) 1058
HaeIII GGCC 3 cut(s) 360, 1152, 1669
HapII CCGG 1 cut(s) 361
HgaI GACGC 1 cut(s) 1820
HhaI GCGC 1 cut(s) 209
Hin6I GCGC 1 cut(s) 207
HinP1I GCGC 1 cut(s) 207
HinfI GANTC 5 cut(s) 61, 692, 1413, 1720, 1892
HpaII CCGG 1 cut(s) 361
HphI GGTGA 4 cut(s) 316, 695, 1067, 1373
Hpy166II GTNNAC 4 cut(s) 33, 414, 654, 1165
Hpy188I TCNGA 4 cut(s) 499, 1093, 1897, 2005
Hpy188III TCNNGA 9 cut(s) 256, 272, 554, 860, 1457, 1465, 1527, 1739, 2031
Hpy8I GTNNAC 4 cut(s) 33, 414, 654, 1165
HpyCH4III ACNGT 6 cut(s) 191, 536, 550, 608, 1162, 1534
HpyCH4IV ACGT 2 cut(s) 1059, 1899
HpyF10VI GCNNNNNNNGC 7 cut(s) 74, 83, 765, 774, 1508, 1796, 1801
HpyF3I CTNAG 3 cut(s) 305, 1368, 1429
HpySE526I ACGT 2 cut(s) 1059, 1899
HspAI GCGC 1 cut(s) 207
Kzo9I GATC 2 cut(s) 718, 856
Lsp1109I GCAGC 4 cut(s) 95, 490, 780, 1020
LweI GCATC 4 cut(s) 95, 490, 821, 1732
MaeI CTAG 4 cut(s) 272, 1139, 1334, 1614
MaeII ACGT 2 cut(s) 1059, 1899
MaeIII GTNAC 7 cut(s) 52, 341, 436, 491, 960, 1055, 1563
MalI GATC 2 cut(s) 720, 858
MboI GATC 2 cut(s) 718, 856
MboII GAAGA 5 cut(s) 415, 651, 866, 1041, 1685
MfeI CAATTG 2 cut(s) 465, 1859
MflI RGATCY 2 cut(s) 718, 856
MhlI GDGCHC 1 cut(s) 367
MlyI GAGTC 3 cut(s) 70, 686, 1407
MmeI TCCRAC 3 cut(s) 261, 1080, 1497
MroXI GAANNNNTTC 2 cut(s) 410, 1363
MslI CAYNNNNRTG 3 cut(s) 419, 1284, 1386
MspI CCGG 1 cut(s) 361
MspR9I CCNGG 1 cut(s) 362
MunI CAATTG 2 cut(s) 465, 1859
Mva1269I GAATGC 1 cut(s) 209
MwoI GCNNNNNNNGC 7 cut(s) 74, 83, 765, 774, 1508, 1796, 1801
NciI CCSGG 1 cut(s) 362
NcoI CCATGG 1 cut(s) 1153
NdeI CATATG 1 cut(s) 454
NdeII GATC 2 cut(s) 718, 856
NlaIV GGNNCC 4 cut(s) 318, 366, 720, 886
NmuCI GTSAC 5 cut(s) 52, 341, 960, 1055, 1563
NspI RCATGY 4 cut(s) 481, 621, 1177, 1949
PaeI GCATGC 2 cut(s) 621, 1177
PaeR7I CTCGAG 1 cut(s) 1746
PagI TCATGA 1 cut(s) 255
PctI GAATGC 1 cut(s) 209
PdmI GAANNNNTTC 2 cut(s) 410, 1363
PfeI GAWTC 2 cut(s) 1720, 1892
PflFI GACNNNGTC 1 cut(s) 695
PflMI CCANNNNNTGG 1 cut(s) 356
PkrI GCNGC 4 cut(s) 85, 505, 770, 1035
PleI GAGTC 3 cut(s) 69, 686, 1407
PpsI GAGTC 3 cut(s) 69, 686, 1407
PshBI ATTAAT 3 cut(s) 23, 1248, 1298
PsiI TTATAA 2 cut(s) 747, 1122
PspN4I GGNNCC 4 cut(s) 318, 366, 720, 886
PspPI GGNCC 2 cut(s) 316, 1657
PspXI VCTCGAGB 1 cut(s) 1746
PsuI RGATCY 2 cut(s) 718, 856
PsyI GACNNNGTC 1 cut(s) 695
RsaI GTAC 2 cut(s) 395, 1604
RsaNI GTAC 2 cut(s) 394, 1603
RseI CAYNNNNRTG 3 cut(s) 419, 1284, 1386
SatI GCNGC 4 cut(s) 84, 504, 769, 1034
Sau3AI GATC 2 cut(s) 718, 856
Sau96I GGNCC 2 cut(s) 316, 1657
ScaI AGTACT 2 cut(s) 395, 1604
SchI GAGTC 3 cut(s) 70, 686, 1407
ScrFI CCNGG 1 cut(s) 362
SduI GDGCHC 1 cut(s) 367
SfaNI GCATC 4 cut(s) 95, 490, 821, 1732
Sfr274I CTCGAG 1 cut(s) 1746
SinI GGWCC 2 cut(s) 316, 1657
SlaI CTCGAG 1 cut(s) 1746
SmiMI CAYNNNNRTG 3 cut(s) 419, 1284, 1386
SmlI CTYRAG 1 cut(s) 1746
SmoI CTYRAG 1 cut(s) 1746
SphI GCATGC 2 cut(s) 621, 1177
SsiI CCGC 1 cut(s) 429
SspI AATATT 2 cut(s) 72, 1872
SspMI CTAG 4 cut(s) 272, 1139, 1334, 1614
StyD4I CCNGG 1 cut(s) 360
StyI CCWWGG 1 cut(s) 1153
TaaI ACNGT 6 cut(s) 191, 536, 550, 608, 1162, 1534
TaiI ACGT 2 cut(s) 1062, 1902
TaqI TCGA 3 cut(s) 1456, 1542, 1747
TaqII GACCGA 1 cut(s) 1334
TatI WGTACW 2 cut(s) 393, 1602
TfiI GAWTC 2 cut(s) 1720, 1892
TscAI CASTG 4 cut(s) 271, 346, 778, 925
TseFI GTSAC 5 cut(s) 52, 341, 960, 1055, 1563
TseI GCWGC 4 cut(s) 83, 503, 768, 1033
Tsp45I GTSAC 5 cut(s) 52, 341, 960, 1055, 1563
TspGWI ACGGA 1 cut(s) 755
TspRI CASTG 4 cut(s) 271, 346, 778, 925
Tth111I GACNNNGTC 1 cut(s) 695
Van91I CCANNNNNTGG 1 cut(s) 356
VpaK11BI GGWCC 2 cut(s) 316, 1657
VspI ATTAAT 3 cut(s) 23, 1248, 1298
XapI RAATTY 5 cut(s) 285, 1134, 1343, 1493, 1909
XbaI TCTAGA 1 cut(s) 271
XceI RCATGY 4 cut(s) 481, 621, 1177, 1949
XcmI CCANNNNNNNNNTGG 2 cut(s) 1480, 1988
XhoI CTCGAG 1 cut(s) 1746
XmnI GAANNNNTTC 2 cut(s) 410, 1363
XspI CTAG 4 cut(s) 272, 1139, 1334, 1614
ZrmI AGTACT 2 cut(s) 395, 1604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.