Rh2AG482500

wall-associated receptor kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000052
Physical Location & Seq
Forward (+)
70341797 .. 70344658
2862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG482500.1

Sequence Viewer

Length: 2217 bp
ATGGAGGTCCAGTTGCTCCTACTTGATATTACTCTCATGACCTTGTGGTCTTTGAGCTGTAGTGCAATACTTGGCGTATCATCATCACCCTCGTTAGCAAAGCCTTATTGTCAATCCCATTGTGGAGGCATAGAAATCCCATATCCTTTTGGAATTGGGCGGAATTGTTACCGGGAGCCCGACACATTTTTCCAAATATTGTGTGACAACTCGACCAACCCGACCAACCCGACCAATCCCAAACCTTTTTTGAACCTTACCGACAGTCGACCGGAGGTTCTGAATATATCTCTTGCGGGCACACTAAAAATAAAATATCCTATCACCTTCTCCGATTGCCCTAACAAGCCAAACCACAGCCAGGCACCCAACCTGGGGCCAACCTCTCTTTGGTTCTCCGATAGGAACATATTCACTGCAGTGAGTTGCGGGAGGCTTGCATCTCTGACGTACGCTGGAGGGACAAAAATGGCTGTCTGTTTGTCTATTTGCGAAGGCTACGGTAGCATATTAGTAAATAATAGTTGCCGTGGTATCAACTGTTGTCAGACACCCCTTCCTTCTGACAATGGTAGAAACTTCACTACTAGTTTTGGAGACTTTATAATAAATAGTACCAGTGAAAGAACTAATTGTAAGTATGCATTCCTCGTAGACCCAGAGTGGTTTACGTCAAATTCAACAAATACTTCTGCCATTGCTGAGATGGACGACGTCCCCATAGTGCTAGATTGGAAGATGAGGGGAGGAATAGATAATTCTACCAAGGATGACGTGAACAGGAATTGCGAATCTCAGTATGGTCCATGTTCCTGCTTAGAGGGCTATCAAGGAAACCCCTATCTTCGTGGTGGATGTCAAGATATCAATGAATGCGAGGATCCAAATCGCCCTAATATATGTGGTTCCGGCAAGATTTGTTACAATTCTAATGGGTCCTTTTATTGCTACACCCCACTGTCCCCACAACCTCGGCCATTGCAGCCGATTAAACTGGCCATTATAGTTCTCTGCAGTGTCTTTGGACTGTTGTTTCATATCATTGGCGCATGGTGGTTGCACAAAGTCATAAAGAAAAGGAAAGACATTAAGCGAAAGCAAAAGTTTTTTAGACTGAATGGTGGTTTGTTGTTGGAGCAACAGTTATCTTCTGGCGAAGTCAATGTTGAGAAGATTAAGTTGTTCAATGCAAAGGAGTTGGAGAAAGCCACAGACCGGTTTAATGTACACAGAATTCTTGGTGAAGGAGGCCAAGGTACTGTTTATAAAGGAATGTTGACAGATGGAAGAAATGTTGCTGTCAAGATGTCAAAAGTAGTAGATGGAGGAGAAGTGAGTCAATTCATTAATGAGATTGTCATTCTTTCACAAATTAACCACAGGAATGTGGTTAAACTCTTGGGATGTTGTTTAGAGAGCGAAGTTCCCCTATTGGTCTATGAATTTTTACCCAACGGAACCCTTTCTCAATACATTCACAGCCGTGATGAGGATTTTCCTCTAACTTGGGAAATGCGATTACGAGTTGGTGCCGAAGTTGCTGGAGCCATTTCCTACTTACATTCATCTGCTTCAATGCCCATTTATCATCGAGACATTAAGTCTTCAAACATACTCTTGGATGATAAATACAGAGCAAAAGTTGCAGACTTTGGGACATCAAGAACTGTTTCCATTGACAAAACACATCTTACCATGACACATGTAAACGGAACATTTGGTTATTTGGACCCTGAGTACTTCCAGTCTAGCCAATTTACAGACAAGAGCGACGTTTATAGCTTCGGAGTAGTCCTTGCCGAACTCTTGACTGGACAAAAACCAGTTTCTGTAACAAGATCGCAGGAAGGGAAGCAAGATGGGAGAAGCCTAGCAACACATTTTATTGTGTCCATGGAGGAGAGTTGTTTGTTTGATATTCTTGATGCTGAAGTTATGGAGGGAGGAAAGAAAGAAGAGATAGAAACGGTTGCTAATCTTGCAAAACGTTGCTTGAATATGAAAGGAAAGAAGCGTCCAACTATGAAAGAAATAGCAGCTGAGTTGGAGGGAATTCTAATGTCAAGTAAATCTTCTGATGTCGAACACATTGCAGAGGTTGAACATGTCCAGACGGAAATAGCCGAGGTTTGGGATGTTTCTACATCAACAGGCTCTCAAATGGACACCGGTTCTTCATTAGATGGACAACCACTGCTGTCTTTCAAGTCTCGCTGA

Protein Analysis

738

Amino Acids

81.71

Weight (kDa)

5.95

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 37 - 104 4e-09 Wall-associated receptor kinase galacturonan-binding
WAK PF08488 173 - 247 2.2e-07 Wall-associated kinase
Pkinase PF00069 407 - 679 2.5e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 409 - 682 3.3e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 605, 1266
AasI GACNNNNNNGTC 1 cut(s) 46
AatII GACGTC 1 cut(s) 717
AccB1I GGYRCC 2 cut(s) 364, 1529
AccI GTMKAC 2 cut(s) 268, 654
AciI CCGC 3 cut(s) 160, 296, 429
AclI AACGTT 1 cut(s) 1987
AclWI GGATC 2 cut(s) 875, 888
AcoI YGGCCR 2 cut(s) 974, 996
AcsI RAATTY 4 cut(s) 676, 1233, 1442, 2052
AcuI CTGAAG 1 cut(s) 1950
AcyI GRCGYC 1 cut(s) 714
AfaI GTAC 5 cut(s) 452, 616, 1227, 1258, 1739
AfiI CCNNNNNNNGG 7 cut(s) 361, 374, 375, 390, 1215, 1489, 2130
AflIII ACRYGT 2 cut(s) 1702, 2104
AgeI ACCGGT 2 cut(s) 1215, 2168
AgsI TTSAA 8 cut(s) 253, 681, 1186, 1575, 1608, 1996, 2102, 2206
AhdI GACNNNNNGTC 1 cut(s) 1600
AhlI ACTAGT 1 cut(s) 587
AjiI CACGTC 1 cut(s) 775
AjnI CCWGG 2 cut(s) 360, 372
AleI CACNNNNGTG 2 cut(s) 419, 1482
AluBI AGCT 3 cut(s) 57, 1782, 2039
AluI AGCT 3 cut(s) 57, 1782, 2039
Alw26I GTCTC 2 cut(s) 591, 1587
AlwI GGATC 2 cut(s) 875, 888
AlwNI CAGNNNCTG 1 cut(s) 1829
AoxI GGCC 4 cut(s) 377, 974, 996, 1249
ApeKI GCWGC 2 cut(s) 982, 2036
ApoI RAATTY 4 cut(s) 676, 1233, 1442, 2052
AseI ATTAAT 1 cut(s) 1347
AsiGI ACCGGT 2 cut(s) 1215, 2168
Asp700I GAANNNNTTC 3 cut(s) 410, 1462, 1669
AspLEI GCGC 1 cut(s) 1049
AspS9I GGNCC 5 cut(s) 7, 377, 803, 936, 1729
AsuC2I CCSGG 1 cut(s) 173
AsuHPI GGTGA 3 cut(s) 78, 316, 1253
AvaII GGWCC 4 cut(s) 7, 803, 936, 1729
BaeGI GKGCMC 1 cut(s) 302
BalI TGGCCA 1 cut(s) 998
BamHI GGATCC 1 cut(s) 880
BanI GGYRCC 2 cut(s) 364, 1529
BanII GRGCYC 1 cut(s) 180
BbsI GAAGAC 1 cut(s) 1596
BbvI GCAGC 2 cut(s) 994, 2048
BccI CCATC 5 cut(s) 700, 1277, 1316, 1853, 2177
BceAI ACGGC 2 cut(s) 513, 1467
BcgI CGANNNNNNTGC 2 cut(s) 2072, 2106
BciT130I CCWGG 2 cut(s) 362, 374
BcnI CCSGG 1 cut(s) 173
BcoDI GTCTC 2 cut(s) 591, 1587
BcuI ACTAGT 1 cut(s) 587
BfaI CTAG 4 cut(s) 588, 728, 1749, 1871
BfmI CTRYAG 3 cut(s) 58, 417, 1012
BisI GCNGC 2 cut(s) 983, 2037
BlsI GCNGC 2 cut(s) 984, 2038
BmcAI AGTACT 1 cut(s) 1739
Bme1390I CCNGG 3 cut(s) 173, 362, 374
Bme18I GGWCC 4 cut(s) 7, 803, 936, 1729
BmeRI GACNNNNNGTC 1 cut(s) 1600
BmgBI CACGTC 1 cut(s) 775
BmgT120I GGNCC 5 cut(s) 7, 377, 803, 936, 1729
BmrFI CCNGG 3 cut(s) 173, 362, 374
BmsI GCATC 2 cut(s) 449, 1915
BpiI GAAGAC 1 cut(s) 1596
BpmI CTGGAG 2 cut(s) 477, 1563
BpuMI CCSGG 1 cut(s) 173
BsaBI GATNNNNATC 1 cut(s) 885
BsaHI GRCGYC 1 cut(s) 714
BsaJI CCNNGG 7 cut(s) 373, 529, 765, 971, 1252, 1893, 2124
BsaWI WCCGGW 3 cut(s) 271, 1215, 2168
BsaXI ACNNNNNCTCC 5 cut(s) 26, 1127, 1157, 1317, 1347
Bsc4I CCNNNNNNNGG 7 cut(s) 361, 374, 375, 390, 1215, 1489, 2130
Bse118I RCCGGY 2 cut(s) 1215, 2168
Bse1I ACTGG 6 cut(s) 10, 618, 999, 1744, 1816, 1823
Bse3DI GCAATG 3 cut(s) 696, 977, 2088
Bse8I GATNNNNATC 1 cut(s) 885
BseBI CCWGG 2 cut(s) 362, 374
BseDI CCNNGG 7 cut(s) 373, 529, 765, 971, 1252, 1893, 2124
BseGI GGATG 5 cut(s) 775, 860, 1409, 1627, 2140
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 7 cut(s) 361, 374, 375, 390, 1215, 1489, 2130
BseMI GCAATG 3 cut(s) 696, 977, 2088
BseMII CTCAG 4 cut(s) 693, 809, 1725, 2031
BseNI ACTGG 6 cut(s) 10, 618, 999, 1744, 1816, 1823
BseRI GAGGAG 2 cut(s) 1341, 1913
BseSI GKGCMC 1 cut(s) 302
BseXI GCAGC 2 cut(s) 994, 2048
Bsh1285I CGRYCG 1 cut(s) 272
BshFI GGCC 4 cut(s) 379, 976, 998, 1251
BshNI GGYRCC 2 cut(s) 364, 1529
BshTI ACCGGT 2 cut(s) 1215, 2168
BsiEI CGRYCG 1 cut(s) 272
BsiSI CCGG 5 cut(s) 172, 272, 909, 1216, 2169
BsiWI CGTACG 1 cut(s) 450
BslFI GGGAC 4 cut(s) 475, 701, 946, 1669
BslI CCNNNNNNNGG 7 cut(s) 361, 374, 375, 390, 1215, 1489, 2130
BsmAI GTCTC 2 cut(s) 591, 1587
BsmFI GGGAC 4 cut(s) 475, 701, 946, 1669
BsmI GAATGC 2 cut(s) 644, 878
BsnI GGCC 4 cut(s) 379, 976, 998, 1251
Bsp1286I GDGCHC 2 cut(s) 180, 302
Bsp1407I TGTACA 1 cut(s) 1225
Bsp143I GATC 2 cut(s) 880, 1838
Bsp19I CCATGG 1 cut(s) 1893
BspACI CCGC 3 cut(s) 160, 296, 429
BspANI GGCC 4 cut(s) 379, 976, 998, 1251
BspCNI CTCAG 4 cut(s) 694, 808, 1726, 2032
BspHI TCATGA 1 cut(s) 36
BspMAI CTGCAG 2 cut(s) 421, 1016
BspPI GGATC 2 cut(s) 875, 888
BspT107I GGYRCC 2 cut(s) 364, 1529
BsrDI GCAATG 3 cut(s) 696, 977, 2088
BsrFI RCCGGY 2 cut(s) 1215, 2168
BsrGI TGTACA 1 cut(s) 1225
BsrI ACTGG 6 cut(s) 10, 618, 999, 1744, 1816, 1823
BssAI RCCGGY 2 cut(s) 1215, 2168
BssECI CCNNGG 7 cut(s) 373, 529, 765, 971, 1252, 1893, 2124
BssMI GATC 2 cut(s) 880, 1838
BssNI GRCGYC 1 cut(s) 714
BssT1I CCWWGG 3 cut(s) 765, 1252, 1893
Bst2UI CCWGG 2 cut(s) 362, 374
Bst4CI ACNGT 9 cut(s) 266, 503, 542, 960, 1029, 1143, 1261, 1669, 1969
Bst6I CTCTTC 1 cut(s) 1950
BstACI GRCGYC 1 cut(s) 714
BstAPI GCANNNNNTGC 1 cut(s) 1643
BstAUI TGTACA 1 cut(s) 1225
BstC8I GCNNGC 2 cut(s) 298, 438
BstDEI CTNAG 5 cut(s) 702, 795, 817, 1734, 2040
BstDSI CCRYGG 2 cut(s) 529, 1893
BstF5I GGATG 5 cut(s) 775, 860, 1409, 1627, 2140
BstHHI GCGC 1 cut(s) 1049
BstKTI GATC 2 cut(s) 883, 1841
BstMAI GTCTC 2 cut(s) 591, 1587
BstMBI GATC 2 cut(s) 880, 1838
BstMCI CGRYCG 1 cut(s) 272
BstMWI GCNNNNNNNGC 6 cut(s) 504, 822, 982, 1538, 1643, 1979
BstNI CCWGG 2 cut(s) 362, 374
BstNSI RCATGY 2 cut(s) 1706, 2108
BstSCI CCNGG 3 cut(s) 171, 360, 372
BstSFI CTRYAG 3 cut(s) 58, 417, 1012
BstSLI GKGCMC 1 cut(s) 302
BstV1I GCAGC 2 cut(s) 994, 2048
BstV2I GAAGAC 1 cut(s) 1596
BstX2I RGATCY 1 cut(s) 880
BstYI RGATCY 1 cut(s) 880
BsuRI GGCC 4 cut(s) 379, 976, 998, 1251
BtgI CCRYGG 2 cut(s) 529, 1893
BtrI CACGTC 1 cut(s) 775
BtsCI GGATG 5 cut(s) 775, 860, 1409, 1627, 2140
BtsI GCAGTG 4 cut(s) 414, 426, 1021, 2192
BtsIMutI CAGTG 6 cut(s) 414, 426, 625, 956, 1021, 2192
Cac8I GCNNGC 2 cut(s) 298, 438
CaiI CAGNNNCTG 1 cut(s) 1829
CciI TCATGA 1 cut(s) 36
CfoI GCGC 1 cut(s) 1049
Cfr10I RCCGGY 2 cut(s) 1215, 2168
Cfr13I GGNCC 5 cut(s) 7, 377, 803, 936, 1729
CseI GACGC 1 cut(s) 2003
Csp6I GTAC 5 cut(s) 451, 615, 1226, 1257, 1738
CspAI ACCGGT 2 cut(s) 1215, 2168
CviAII CATG 7 cut(s) 37, 807, 1050, 1696, 1703, 1894, 2105
CviQI GTAC 5 cut(s) 451, 615, 1226, 1257, 1738
DdeI CTNAG 5 cut(s) 702, 795, 817, 1734, 2040
DpnI GATC 2 cut(s) 882, 1840
DpnII GATC 2 cut(s) 880, 1838
DrdI GACNNNNNNGTC 1 cut(s) 46
DriI GACNNNNNGTC 1 cut(s) 1600
DseDI GACNNNNNNGTC 1 cut(s) 46
EaeI YGGCCR 2 cut(s) 974, 996
Eam1104I CTCTTC 1 cut(s) 1950
Eam1105I GACNNNNNGTC 1 cut(s) 1600
EarI CTCTTC 1 cut(s) 1950
EciI GGCGGA 1 cut(s) 175
Eco130I CCWWGG 3 cut(s) 765, 1252, 1893
Eco24I GRGCYC 1 cut(s) 180
Eco32I GATATC 1 cut(s) 865
Eco47I GGWCC 4 cut(s) 7, 803, 936, 1729
Eco57I CTGAAG 1 cut(s) 1950
EcoO109I RGGNCCY 1 cut(s) 936
EcoRI GAATTC 2 cut(s) 1233, 2052
EcoRII CCWGG 2 cut(s) 360, 372
EcoRV GATATC 1 cut(s) 865
EcoT14I CCWWGG 3 cut(s) 765, 1252, 1893
EcoT22I ATGCAT 1 cut(s) 646
EcoT38I GRGCYC 1 cut(s) 180
ErhI CCWWGG 3 cut(s) 765, 1252, 1893
FaeI CATG 7 cut(s) 40, 810, 1053, 1699, 1706, 1897, 2108
FalI AAGNNNNNCTT 2 cut(s) 2056, 2088
FaqI GGGAC 4 cut(s) 475, 701, 946, 1669
FatI CATG 7 cut(s) 36, 806, 1049, 1695, 1702, 1893, 2104
FauI CCCGC 2 cut(s) 289, 422
FblI GTMKAC 2 cut(s) 268, 654
Fnu4HI GCNGC 2 cut(s) 983, 2037
FokI GGATG 5 cut(s) 782, 867, 1416, 1634, 2147
FriOI GRGCYC 1 cut(s) 180
Fsp4HI GCNGC 2 cut(s) 983, 2037
FspBI CTAG 4 cut(s) 588, 728, 1749, 1871
GlaI GCGC 1 cut(s) 1048
GluI GCNGC 2 cut(s) 983, 2037
GsuI CTGGAG 2 cut(s) 477, 1563
HaeIII GGCC 4 cut(s) 379, 976, 998, 1251
HapII CCGG 5 cut(s) 172, 272, 909, 1216, 2169
HgaI GACGC 1 cut(s) 2003
HhaI GCGC 1 cut(s) 1049
Hin1I GRCGYC 1 cut(s) 714
Hin1II CATG 7 cut(s) 40, 810, 1053, 1699, 1706, 1897, 2108
Hin6I GCGC 1 cut(s) 1047
HinP1I GCGC 1 cut(s) 1047
HincII GTYRAC 2 cut(s) 269, 1278
HindII GTYRAC 2 cut(s) 269, 1278
HinfI GANTC 2 cut(s) 791, 1336
HpaII CCGG 5 cut(s) 172, 272, 909, 1216, 2169
HphI GGTGA 3 cut(s) 78, 316, 1253
Hpy166II GTNNAC 7 cut(s) 269, 655, 669, 778, 1228, 1278, 1708
Hpy188I TCNGA 8 cut(s) 282, 334, 400, 447, 549, 565, 1787, 2077
Hpy188III TCNNGA 8 cut(s) 37, 860, 1303, 1592, 1662, 1807, 1922, 2110
Hpy8I GTNNAC 7 cut(s) 269, 655, 669, 778, 1228, 1278, 1708
Hpy99I CGWCG 2 cut(s) 716, 1775
HpyAV CCTTC 6 cut(s) 337, 488, 566, 570, 1238, 1841
HpyCH4III ACNGT 9 cut(s) 266, 503, 542, 960, 1029, 1143, 1261, 1669, 1969
HpyCH4IV ACGT 6 cut(s) 449, 671, 714, 774, 1773, 1987
HpyF10VI GCNNNNNNNGC 6 cut(s) 504, 822, 982, 1538, 1643, 1979
HpyF3I CTNAG 5 cut(s) 702, 795, 817, 1734, 2040
HpySE526I ACGT 6 cut(s) 449, 671, 714, 774, 1773, 1987
Hsp92I GRCGYC 1 cut(s) 714
Hsp92II CATG 7 cut(s) 40, 810, 1053, 1699, 1706, 1897, 2108
HspAI GCGC 1 cut(s) 1047
Kzo9I GATC 2 cut(s) 880, 1838
LmnI GCTCC 4 cut(s) 21, 175, 1135, 1544
Lsp1109I GCAGC 2 cut(s) 994, 2048
LweI GCATC 2 cut(s) 449, 1915
MaeI CTAG 4 cut(s) 588, 728, 1749, 1871
MaeII ACGT 6 cut(s) 449, 671, 714, 774, 1773, 1987
MaeIII GTNAC 4 cut(s) 167, 203, 920, 1831
MalI GATC 2 cut(s) 882, 1840
MboI GATC 2 cut(s) 880, 1838
MboII GAAGA 9 cut(s) 748, 836, 1140, 1183, 1299, 1596, 1967, 2064, 2166
MflI RGATCY 1 cut(s) 880
MhlI GDGCHC 2 cut(s) 180, 302
MlsI TGGCCA 1 cut(s) 998
MluNI TGGCCA 1 cut(s) 998
MlyI GAGTC 1 cut(s) 1345
MmeI TCCRAC 4 cut(s) 1113, 1179, 2025, 2042
Mox20I TGGCCA 1 cut(s) 998
Mph1103I ATGCAT 1 cut(s) 646
MroXI GAANNNNTTC 3 cut(s) 410, 1462, 1669
MscI TGGCCA 1 cut(s) 998
MseI TTAA 8 cut(s) 990, 1089, 1176, 1221, 1347, 1374, 1392, 1599
MslI CAYNNNNRTG 3 cut(s) 419, 1383, 1482
Msp20I TGGCCA 1 cut(s) 998
MspA1I CMGCKG 1 cut(s) 2039
MspI CCGG 5 cut(s) 172, 272, 909, 1216, 2169
MspR9I CCNGG 3 cut(s) 173, 362, 374
Mva1269I GAATGC 2 cut(s) 644, 878
MvaI CCWGG 2 cut(s) 362, 374
MwoI GCNNNNNNNGC 6 cut(s) 504, 822, 982, 1538, 1643, 1979
NciI CCSGG 1 cut(s) 173
NcoI CCATGG 1 cut(s) 1893
NdeII GATC 2 cut(s) 880, 1838
NlaIII CATG 7 cut(s) 40, 810, 1053, 1699, 1706, 1897, 2108
NmeAIII GCCGAG 2 cut(s) 952, 2149
NmuCI GTSAC 1 cut(s) 203
NsiI ATGCAT 1 cut(s) 646
NspI RCATGY 2 cut(s) 1706, 2108
OliI CACNNNNGTG 2 cut(s) 419, 1482
PagI TCATGA 1 cut(s) 36
PciI ACATGT 2 cut(s) 1702, 2104
PcsI WCGNNNNNNNCGW 1 cut(s) 218
PctI GAATGC 2 cut(s) 644, 878
PdmI GAANNNNTTC 3 cut(s) 410, 1462, 1669
PfeI GAWTC 1 cut(s) 791
Pfl23II CGTACG 1 cut(s) 450
PflFI GACNNNGTC 1 cut(s) 713
PinAI ACCGGT 2 cut(s) 1215, 2168
PkrI GCNGC 2 cut(s) 984, 2038
PleI GAGTC 1 cut(s) 1344
PpsI GAGTC 1 cut(s) 1344
PpuMI RGGWCCY 1 cut(s) 936
PscI ACATGT 2 cut(s) 1702, 2104
PshBI ATTAAT 1 cut(s) 1347
PsiI TTATAA 2 cut(s) 605, 1266
Psp1406I AACGTT 1 cut(s) 1987
Psp5II RGGWCCY 1 cut(s) 936
Psp6I CCWGG 2 cut(s) 360, 372
PspGI CCWGG 2 cut(s) 360, 372
PspLI CGTACG 1 cut(s) 450
PspPI GGNCC 5 cut(s) 7, 377, 803, 936, 1729
PspPPI RGGWCCY 1 cut(s) 936
PstI CTGCAG 2 cut(s) 421, 1016
PstNI CAGNNNCTG 1 cut(s) 1829
PsuI RGATCY 1 cut(s) 880
PsyI GACNNNGTC 1 cut(s) 713
PvuII CAGCTG 1 cut(s) 2039
RsaI GTAC 5 cut(s) 452, 616, 1227, 1258, 1739
RsaNI GTAC 5 cut(s) 451, 615, 1226, 1257, 1738
RseI CAYNNNNRTG 3 cut(s) 419, 1383, 1482
SalI GTCGAC 1 cut(s) 267
SaqAI TTAA 8 cut(s) 990, 1089, 1176, 1221, 1347, 1374, 1392, 1599
SatI GCNGC 2 cut(s) 983, 2037
Sau3AI GATC 2 cut(s) 880, 1838
Sau96I GGNCC 5 cut(s) 7, 377, 803, 936, 1729
ScaI AGTACT 1 cut(s) 1739
SchI GAGTC 1 cut(s) 1345
ScrFI CCNGG 3 cut(s) 173, 362, 374
SduI GDGCHC 2 cut(s) 180, 302
SfaNI GCATC 2 cut(s) 449, 1915
SfcI CTRYAG 3 cut(s) 58, 417, 1012
SinI GGWCC 4 cut(s) 7, 803, 936, 1729
SmiMI CAYNNNNRTG 3 cut(s) 419, 1383, 1482
SpeI ACTAGT 1 cut(s) 587
SsiI CCGC 3 cut(s) 160, 296, 429
SspI AATATT 1 cut(s) 198
SspMI CTAG 4 cut(s) 588, 728, 1749, 1871
StyD4I CCNGG 3 cut(s) 171, 360, 372
StyI CCWWGG 3 cut(s) 765, 1252, 1893
TaaI ACNGT 9 cut(s) 266, 503, 542, 960, 1029, 1143, 1261, 1669, 1969
TaiI ACGT 6 cut(s) 452, 674, 717, 777, 1776, 1990
TaqI TCGA 4 cut(s) 212, 268, 1591, 2082
TatI WGTACW 2 cut(s) 1225, 1737
TfiI GAWTC 1 cut(s) 791
Tru1I TTAA 8 cut(s) 990, 1089, 1176, 1221, 1347, 1374, 1392, 1599
Tru9I TTAA 8 cut(s) 990, 1089, 1176, 1221, 1347, 1374, 1392, 1599
TscAI CASTG 6 cut(s) 421, 426, 625, 963, 1021, 2199
TseFI GTSAC 1 cut(s) 203
TseI GCWGC 2 cut(s) 982, 2036
Tsp45I GTSAC 1 cut(s) 203
TspDTI ATGAA 8 cut(s) 885, 1025, 1333, 1455, 1554, 2015, 2039, 2166
TspGWI ACGGA 3 cut(s) 1470, 1725, 2129
TspRI CASTG 6 cut(s) 421, 426, 625, 963, 1021, 2199
Tth111I GACNNNGTC 1 cut(s) 713
VpaK11BI GGWCC 4 cut(s) 7, 803, 936, 1729
VspI ATTAAT 1 cut(s) 1347
XapI RAATTY 4 cut(s) 676, 1233, 1442, 2052
XceI RCATGY 2 cut(s) 1706, 2108
XcmI CCANNNNNNNNNTGG 2 cut(s) 387, 703
XmiI GTMKAC 2 cut(s) 268, 654
XmnI GAANNNNTTC 3 cut(s) 410, 1462, 1669
XspI CTAG 4 cut(s) 588, 728, 1749, 1871
ZraI GACGTC 1 cut(s) 715
ZrmI AGTACT 1 cut(s) 1739
Zsp2I ATGCAT 1 cut(s) 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.