AT1G16130

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
5525293 .. 5528212
2920 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G16130.1

Sequence Viewer

Length: 2247 bp
ATGAAGACAGAGACTCACAACCGTCAATGCATTCCACTAGCGATCTCTGTCCTATCTCTGTTCATCAATGGCGTCTCATCAGCAAGACAACCTCCAGATCGGTGTAACAGAGTCTGCGGAGAAATATCAATTCCTTTCCCGTTTGGCATCGGTGGGAAAGATTGCTATCTAAACCCGTGGTACGAGGTTGTCTGTAACAGCACAAACTCTGTTCCGTTCCTCTCAAGGATCAACAGAGAATTGGTGAACATCTCTCTCAATGGAGTTGTCCACATCAAAGCTCCCGTAACTTCCTCCGGCTGTTCTACAGGAACATCTCAGCCACTTACACCGCCGCCTTTAAACGTTGCTGGCCAAGGCAGCCCCTATTTCCTCACGGACAAGAACCTACTCGTGGCGGTTGGTTGCAAATTCAAGGCTGTTATGGCGGGTATTACATCGCAGATCACCAGTTGTGAGTCGAGTTGTAACGAGAGAAACAGTAGCAGCCAAGAAGGAAGAAACAAAATCTGCAATGGTTATAAATGTTGCCAGACGAGGATACCAGAAGGGCAGCCGCAAGTAATCAGTGTGGATATAGAGATCCCTCAAGGTAACAACACAACAGGAGAAGGAGGATGCAGAGTTGCGTTTTTGACGAGCGACAAGTATTCAAGTTTAAATGTTACAGAGCCAGAAAAGTTTCATGGTCATGGATACGCGGCGGTCGAGCTTGGATGGTTCTTTGATACTTCCGATTCTCGTGATACACAACCCATAAGTTGTAAAAATGCGTCAGATACAACACCGTACACTTCCGATACGAGGTGTAGTTGCTCATACGGCTACTTTTCTGGATTCAGCTATAGGGACTGCTACTGTAACTCCCCAGGTTATAAAGGGAATCCGTTCCTTCCAGGTGGTTGTGTAGACGTGGATGAATGTAAACTAGATATAGGACGCAACCAGTGTAAAGATCAAAGCTGTGTGAATCTGCCCGGTTGGTTTGACTGCCAGCCCAAGAAACCAGAGCAGCTCAAGCGGGTGATTCAAGGTGTTCTTATAGGTTCAGCACTGTTGCTTTTCGCCTTCGGAATCTTCGGGTTGTACAAGTTCGTACAGAAGCGGAGGAAACTAATCCGAATGAGGAAGTTCTTCAGACGTAATGGAGGTATGTTGTTAAAACAACAGTTAGCTAGAAAAGAAGGCAATGTAGAGATGTCAAGAATATTCAGCTCACATGAGTTGGAGAAAGCTACTGATAACTTCAACAAGAATAGGGTTCTTGGGCAAGGAGGTCAAGGTACAGTGTATAAGGGAATGCTCGTTGATGGTAGAATCGTCGCAGTAAAAAGGTCGAAAGCTGTGGATGAAGATAGGGTAGAAGAGTTCATCAATGAAGTTGTTGTTCTTGCGCAGATCAATCATAGAAATATTGTTAAACTTTTGGGGTGTTGTCTTGAAACGGAAGTTCCAGTCTTAGTTTATGAGTTTGTTCCAAATGGAGACTTATGCAAGCGTCTTCATGATGAATCTGATGATTACACAATGACATGGGAGGTGCGTCTTCACATTGCTATAGAGATTGCAGGAGCACTTTCTTATTTGCATTCTGCTGCATCTTTCCCCATATATCATAGAGATATCAAGACTACTAATATACTCTTAGATGAGAGAAACCGAGCTAAGGTGTCGGATTTCGGAACTTCAAGATCAGTAACTATAGATCAAACTCACTTGACAACTCAAGTTGCAGGCACTTTTGGATATGTGGATCCAGAGTACTTTCAATCAAGCAAGTTTACGGAAAAAAGTGATGTTTATAGTTTTGGAGTTGTCCTTGTGGAGCTCTTAACCGGAGAAAAACCTTCCTCCCGTGTCCGGTCTGAAGAAAACAGGGGCCTTGCAGCTCACTTTGTCGAAGCCGTGAAAGAGAACAGAGTGCTTGACATAGTTGATGATCGGATCAAAGATGAATGCAACATGGACCAAGTAATGTCAGTGGCAAATCTAGCTAGAAGGTGTTTAAACCGAAAAGGGAAGAAGAGGCCAAACATGAGAGAGGTTTCAATTGAGCTGGAGATGATTCGTTCATCACATTATGATTCAGGAATTCATATAGAGGACGACGATGAGGAAGATGATCAAGCCATGGAACTCAACTTTAACGACACTTGGGAGGTTGGTGCGACTGCTCCAGCCTCCATGTTTAACAATGCATCCCCCACGTCTGATGCTGAGCCTCTGGTGCCTTTACGAACATGGTAA

Protein Analysis

748

Amino Acids

83.36

Weight (kDa)

6.32

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 85 1.5e-08 Wall-associated receptor kinase galacturonan-binding
WAK PF08488 168 - 248 5.3e-35 Wall-associated kinase
Pkinase PF00069 416 - 682 7.9e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 418 - 684 5.7e-52 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 522, 876
Acc16I TGCGCA 1 cut(s) 1395
AccB1I GGYRCC 1 cut(s) 2227
AccI GTMKAC 1 cut(s) 909
AccII CGCG 1 cut(s) 701
AclI AACGTT 1 cut(s) 345
AclWI GGATC 5 cut(s) 236, 577, 1748, 1761, 1952
AcoI YGGCCR 1 cut(s) 352
AcsI RAATTY 2 cut(s) 410, 2091
AcuI CTGAAG 2 cut(s) 1120, 1887
AcyI GRCGYC 1 cut(s) 72
AfaI GTAC 6 cut(s) 182, 791, 1088, 1098, 1285, 1763
AfiI CCNNNNNNNGG 4 cut(s) 394, 804, 1666, 1860
AgsI TTSAA 8 cut(s) 415, 654, 1031, 1249, 1442, 1689, 1769, 2049
AjiI CACGTC 2 cut(s) 913, 2208
AjnI CCWGG 2 cut(s) 868, 895
Alw21I GWGCWC 2 cut(s) 1576, 1830
Alw26I GTCTC 3 cut(s) 5, 79, 1479
AlwI GGATC 5 cut(s) 236, 577, 1748, 1761, 1952
AlwNI CAGNNNCTG 1 cut(s) 114
AoxI GGCC 3 cut(s) 352, 1879, 2027
ApeKI GCWGC 6 cut(s) 360, 486, 553, 1012, 1595, 1886
ApoI RAATTY 2 cut(s) 410, 2091
Asp700I GAANNNNTTC 3 cut(s) 681, 887, 1133
AspLEI GCGC 1 cut(s) 1396
AspS9I GGNCC 2 cut(s) 1879, 1966
AsuC2I CCSGG 1 cut(s) 978
AsuHPI GGTGA 3 cut(s) 256, 439, 1036
AvaII GGWCC 1 cut(s) 1966
BalI TGGCCA 1 cut(s) 354
BamHI GGATCC 1 cut(s) 1753
BanI GGYRCC 1 cut(s) 2227
BanII GRGCYC 1 cut(s) 1830
BauI CACGAG 2 cut(s) 392, 741
BbsI GAAGAC 3 cut(s) 11, 1493, 1538
Bbv12I GWGCWC 2 cut(s) 1576, 1830
BbvI GCAGC 6 cut(s) 372, 498, 565, 1024, 1582, 1898
BccI CCATC 2 cut(s) 711, 1304
BceAI ACGGC 2 cut(s) 838, 1889
BciT130I CCWGG 2 cut(s) 870, 897
BciVI GTATCC 2 cut(s) 534, 689
BclI TGATCA 1 cut(s) 2122
BcnI CCSGG 1 cut(s) 978
BcoDI GTCTC 3 cut(s) 5, 79, 1479
BfaI CTAG 5 cut(s) 38, 929, 1176, 1991, 1995
BfmI CTRYAG 4 cut(s) 306, 844, 1557, 1701
BfuI GTATCC 2 cut(s) 534, 689
BisI GCNGC 9 cut(s) 335, 361, 487, 554, 557, 702, 1013, 1596, 1887
BlpI GCTNAGC 1 cut(s) 2217
BlsI GCNGC 9 cut(s) 336, 362, 488, 555, 558, 703, 1014, 1597, 1888
BmcAI AGTACT 1 cut(s) 1763
Bme1390I CCNGG 3 cut(s) 870, 897, 978
Bme18I GGWCC 1 cut(s) 1966
BmgBI CACGTC 2 cut(s) 913, 2208
BmgT120I GGNCC 2 cut(s) 1879, 1966
BmiI GGNNCC 3 cut(s) 1755, 1880, 2229
BmrFI CCNGG 3 cut(s) 870, 897, 978
BmsI GCATC 5 cut(s) 156, 608, 1607, 2203, 2207
BpiI GAAGAC 3 cut(s) 11, 1493, 1538
BpmI CTGGAG 3 cut(s) 78, 2078, 2160
Bpu10I CCTNAGC 1 cut(s) 1665
Bpu1102I GCTNAGC 1 cut(s) 2217
BpuEI CTTGAG 4 cut(s) 208, 573, 1001, 1710
BpuMI CCSGG 1 cut(s) 978
BsaBI GATNNNNATC 1 cut(s) 165
BsaHI GRCGYC 1 cut(s) 72
BsaJI CCNNGG 4 cut(s) 176, 355, 868, 2130
BsaWI WCCGGW 2 cut(s) 1835, 1860
BsaXI ACNNNNNCTCC 2 cut(s) 848, 878
Bsc4I CCNNNNNNNGG 4 cut(s) 394, 804, 1666, 1860
Bse1I ACTGG 3 cut(s) 450, 946, 1454
Bse3DI GCAATG 3 cut(s) 520, 1195, 1551
Bse8I GATNNNNATC 1 cut(s) 165
BseBI CCWGG 2 cut(s) 870, 897
BseDI CCNNGG 4 cut(s) 176, 355, 868, 2130
BseGI GGATG 5 cut(s) 623, 722, 922, 1354, 2198
BseJI GATNNNNATC 1 cut(s) 165
BseLI CCNNNNNNNGG 4 cut(s) 394, 804, 1666, 1860
BseMI GCAATG 3 cut(s) 520, 1195, 1551
BseMII CTCAG 2 cut(s) 332, 2208
BseNI ACTGG 3 cut(s) 450, 946, 1454
BseXI GCAGC 6 cut(s) 372, 498, 565, 1024, 1582, 1898
Bsh1236I CGCG 1 cut(s) 701
Bsh1285I CGRYCG 1 cut(s) 708
BshFI GGCC 3 cut(s) 354, 1881, 2029
BshNI GGYRCC 1 cut(s) 2227
BsiEI CGRYCG 1 cut(s) 708
BsiHKAI GWGCWC 2 cut(s) 1576, 1830
BsiSI CCGG 4 cut(s) 297, 978, 1836, 1861
BslFI GGGAC 1 cut(s) 863
BslI CCNNNNNNNGG 4 cut(s) 394, 804, 1666, 1860
BsmAI GTCTC 3 cut(s) 5, 79, 1479
BsmBI CGTCTC 1 cut(s) 79
BsmFI GGGAC 1 cut(s) 863
BsmI GAATGC 4 cut(s) 30, 1305, 1588, 1961
BsnI GGCC 3 cut(s) 354, 1881, 2029
Bsp1286I GDGCHC 2 cut(s) 1576, 1830
Bsp1407I TGTACA 1 cut(s) 1086
Bsp1720I GCTNAGC 1 cut(s) 2217
Bsp19I CCATGG 1 cut(s) 2130
BspANI GGCC 3 cut(s) 354, 1881, 2029
BspCNI CTCAG 2 cut(s) 331, 2209
BspFNI CGCG 1 cut(s) 701
BspHI TCATGA 1 cut(s) 1504
BspLI GGNNCC 3 cut(s) 1755, 1880, 2229
BspPI GGATC 5 cut(s) 236, 577, 1748, 1761, 1952
BspT107I GGYRCC 1 cut(s) 2227
BsrDI GCAATG 3 cut(s) 520, 1195, 1551
BsrGI TGTACA 1 cut(s) 1086
BsrI ACTGG 3 cut(s) 450, 946, 1454
BssECI CCNNGG 4 cut(s) 176, 355, 868, 2130
BssNI GRCGYC 1 cut(s) 72
BssSI CACGAG 2 cut(s) 392, 741
BssT1I CCWWGG 2 cut(s) 355, 2130
Bst2BI CACGAG 2 cut(s) 392, 741
Bst2UI CCWGG 2 cut(s) 870, 897
Bst4CI ACNGT 7 cut(s) 23, 482, 789, 860, 1056, 1170, 1288
Bst6I CTCTTC 2 cut(s) 1359, 2018
BstACI GRCGYC 1 cut(s) 72
BstAUI TGTACA 1 cut(s) 1086
BstC8I GCNNGC 4 cut(s) 352, 995, 1496, 1735
BstDEI CTNAG 5 cut(s) 318, 1459, 1645, 1665, 2217
BstDSI CCRYGG 2 cut(s) 176, 2130
BstF5I GGATG 5 cut(s) 623, 722, 922, 1354, 2198
BstFNI CGCG 1 cut(s) 701
BstHHI GCGC 1 cut(s) 1396
BstMAI GTCTC 3 cut(s) 5, 79, 1479
BstMCI CGRYCG 1 cut(s) 708
BstMWI GCNNNNNNNGC 6 cut(s) 360, 425, 822, 1018, 1991, 2227
BstNI CCWGG 2 cut(s) 870, 897
BstSCI CCNGG 3 cut(s) 868, 895, 976
BstSFI CTRYAG 4 cut(s) 306, 844, 1557, 1701
BstUI CGCG 1 cut(s) 701
BstV1I GCAGC 6 cut(s) 372, 498, 565, 1024, 1582, 1898
BstV2I GAAGAC 3 cut(s) 11, 1493, 1538
BstX2I RGATCY 2 cut(s) 582, 1753
BstYI RGATCY 2 cut(s) 582, 1753
BsuI GTATCC 2 cut(s) 534, 689
BsuRI GGCC 3 cut(s) 354, 1881, 2029
BtgI CCRYGG 2 cut(s) 176, 2130
BtgZI GCGATG 1 cut(s) 423
BtrI CACGTC 2 cut(s) 913, 2208
BtsCI GGATG 5 cut(s) 623, 722, 922, 1354, 2198
BtsIMutI CAGTG 5 cut(s) 574, 953, 1052, 1293, 1986
Cac8I GCNNGC 4 cut(s) 352, 995, 1496, 1735
CaiI CAGNNNCTG 1 cut(s) 114
CciI TCATGA 1 cut(s) 1504
CfoI GCGC 1 cut(s) 1396
Cfr13I GGNCC 2 cut(s) 1879, 1966
CseI GACGC 5 cut(s) 61, 762, 948, 1487, 1532
Csp6I GTAC 6 cut(s) 181, 790, 1087, 1097, 1284, 1762
CviQI GTAC 6 cut(s) 181, 790, 1087, 1097, 1284, 1762
DdeI CTNAG 5 cut(s) 318, 1459, 1645, 1665, 2217
DraI TTTAAA 3 cut(s) 342, 660, 2007
EaeI YGGCCR 1 cut(s) 352
Eam1104I CTCTTC 2 cut(s) 1359, 2018
EarI CTCTTC 2 cut(s) 1359, 2018
Ecl136II GAGCTC 1 cut(s) 1828
Eco130I CCWWGG 2 cut(s) 355, 2130
Eco24I GRGCYC 1 cut(s) 1830
Eco32I GATATC 1 cut(s) 1624
Eco47I GGWCC 1 cut(s) 1966
Eco53kI GAGCTC 1 cut(s) 1828
Eco57I CTGAAG 2 cut(s) 1120, 1887
EcoICRI GAGCTC 1 cut(s) 1828
EcoO109I RGGNCCY 1 cut(s) 1879
EcoRI GAATTC 1 cut(s) 2091
EcoRII CCWGG 2 cut(s) 868, 895
EcoRV GATATC 1 cut(s) 1624
EcoT14I CCWWGG 2 cut(s) 355, 2130
EcoT22I ATGCAT 2 cut(s) 32, 2200
EcoT38I GRGCYC 1 cut(s) 1830
ErhI CCWWGG 2 cut(s) 355, 2130
Esp3I CGTCTC 1 cut(s) 79
FalI AAGNNNNNCTT 2 cut(s) 1023, 1055
FaqI GGGAC 1 cut(s) 863
FauI CCCGC 2 cut(s) 421, 1014
FbaI TGATCA 1 cut(s) 2122
FblI GTMKAC 1 cut(s) 909
Fnu4HI GCNGC 9 cut(s) 335, 361, 487, 554, 557, 702, 1013, 1596, 1887
FokI GGATG 5 cut(s) 630, 729, 929, 1361, 2185
FriOI GRGCYC 1 cut(s) 1830
Fsp4HI GCNGC 9 cut(s) 335, 361, 487, 554, 557, 702, 1013, 1596, 1887
FspBI CTAG 5 cut(s) 38, 929, 1176, 1991, 1995
FspI TGCGCA 1 cut(s) 1395
GlaI GCGC 1 cut(s) 1395
GluI GCNGC 9 cut(s) 335, 361, 487, 554, 557, 702, 1013, 1596, 1887
GsuI CTGGAG 3 cut(s) 78, 2078, 2160
HaeIII GGCC 3 cut(s) 354, 1881, 2029
HapII CCGG 4 cut(s) 297, 978, 1836, 1861
HgaI GACGC 5 cut(s) 61, 762, 948, 1487, 1532
HhaI GCGC 1 cut(s) 1396
Hin1I GRCGYC 1 cut(s) 72
Hin6I GCGC 1 cut(s) 1394
HinP1I GCGC 1 cut(s) 1394
HpaII CCGG 4 cut(s) 297, 978, 1836, 1861
HphI GGTGA 3 cut(s) 256, 439, 1036
Hpy166II GTNNAC 6 cut(s) 247, 271, 792, 910, 926, 1782
Hpy8I GTNNAC 6 cut(s) 247, 271, 792, 910, 926, 1782
Hpy99I CGWCG 2 cut(s) 1325, 2111
HpyAV CCTTC 8 cut(s) 488, 542, 605, 902, 1078, 1178, 1857, 1992
HpyCH4III ACNGT 7 cut(s) 23, 482, 789, 860, 1056, 1170, 1288
HpyCH4IV ACGT 4 cut(s) 345, 912, 1141, 2207
HpyF10VI GCNNNNNNNGC 6 cut(s) 360, 425, 822, 1018, 1991, 2227
HpyF3I CTNAG 5 cut(s) 318, 1459, 1645, 1665, 2217
HpySE526I ACGT 4 cut(s) 345, 912, 1141, 2207
Hsp92I GRCGYC 1 cut(s) 72
HspAI GCGC 1 cut(s) 1394
Ksp22I TGATCA 1 cut(s) 2122
LmnI GCTCC 4 cut(s) 286, 1571, 1825, 2179
Lsp1109I GCAGC 6 cut(s) 372, 498, 565, 1024, 1582, 1898
LweI GCATC 5 cut(s) 156, 608, 1607, 2203, 2207
MaeI CTAG 5 cut(s) 38, 929, 1176, 1991, 1995
MaeII ACGT 4 cut(s) 345, 912, 1141, 2207
MaeIII GTNAC 8 cut(s) 104, 194, 286, 467, 593, 664, 860, 1696
MfeI CAATTG 1 cut(s) 2049
MflI RGATCY 2 cut(s) 582, 1753
MhlI GDGCHC 2 cut(s) 1576, 1830
MlsI TGGCCA 1 cut(s) 354
MluCI AATT 5 cut(s) 129, 239, 410, 2049, 2091
MluNI TGGCCA 1 cut(s) 354
MlyI GAGTC 3 cut(s) 7, 120, 467
MmeI TCCRAC 2 cut(s) 1206, 1653
Mox20I TGGCCA 1 cut(s) 354
Mph1103I ATGCAT 2 cut(s) 32, 2200
MroXI GAANNNNTTC 3 cut(s) 681, 887, 1133
MscI TGGCCA 1 cut(s) 354
MseI TTAA 8 cut(s) 341, 659, 1160, 1419, 1832, 2006, 2145, 2190
MslI CAYNNNNRTG 1 cut(s) 690
Msp20I TGGCCA 1 cut(s) 354
MspI CCGG 4 cut(s) 297, 978, 1836, 1861
MspR9I CCNGG 3 cut(s) 870, 897, 978
MssI GTTTAAAC 1 cut(s) 2007
MunI CAATTG 1 cut(s) 2049
Mva1269I GAATGC 4 cut(s) 30, 1305, 1588, 1961
MvaI CCWGG 2 cut(s) 870, 897
MvnI CGCG 1 cut(s) 701
MwoI GCNNNNNNNGC 6 cut(s) 360, 425, 822, 1018, 1991, 2227
NciI CCSGG 1 cut(s) 978
NcoI CCATGG 1 cut(s) 2130
NlaIV GGNNCC 3 cut(s) 1755, 1880, 2229
NsbI TGCGCA 1 cut(s) 1395
NsiI ATGCAT 2 cut(s) 32, 2200
PagI TCATGA 1 cut(s) 1504
PcsI WCGNNNNNNNCGW 1 cut(s) 705
PctI GAATGC 4 cut(s) 30, 1305, 1588, 1961
PdmI GAANNNNTTC 3 cut(s) 681, 887, 1133
PkrI GCNGC 9 cut(s) 336, 362, 488, 555, 558, 703, 1014, 1597, 1888
PleI GAGTC 3 cut(s) 7, 119, 466
PmeI GTTTAAAC 1 cut(s) 2007
PpsI GAGTC 3 cut(s) 7, 119, 466
PsiI TTATAA 2 cut(s) 522, 876
Psp124BI GAGCTC 1 cut(s) 1830
Psp1406I AACGTT 1 cut(s) 345
Psp6I CCWGG 2 cut(s) 868, 895
PspGI CCWGG 2 cut(s) 868, 895
PspN4I GGNNCC 3 cut(s) 1755, 1880, 2229
PspPI GGNCC 2 cut(s) 1879, 1966
PstNI CAGNNNCTG 1 cut(s) 114
PsuI RGATCY 2 cut(s) 582, 1753
RsaI GTAC 6 cut(s) 182, 791, 1088, 1098, 1285, 1763
RsaNI GTAC 6 cut(s) 181, 790, 1087, 1097, 1284, 1762
RseI CAYNNNNRTG 1 cut(s) 690
SacI GAGCTC 1 cut(s) 1830
SaqAI TTAA 8 cut(s) 341, 659, 1160, 1419, 1832, 2006, 2145, 2190
SatI GCNGC 9 cut(s) 335, 361, 487, 554, 557, 702, 1013, 1596, 1887
Sau96I GGNCC 2 cut(s) 1879, 1966
ScaI AGTACT 1 cut(s) 1763
SchI GAGTC 3 cut(s) 7, 120, 467
ScrFI CCNGG 3 cut(s) 870, 897, 978
SduI GDGCHC 2 cut(s) 1576, 1830
SfaNI GCATC 5 cut(s) 156, 608, 1607, 2203, 2207
SfcI CTRYAG 4 cut(s) 306, 844, 1557, 1701
SinI GGWCC 1 cut(s) 1966
SmiMI CAYNNNNRTG 1 cut(s) 690
SmlI CTYRAG 4 cut(s) 223, 588, 1016, 1725
SmoI CTYRAG 4 cut(s) 223, 588, 1016, 1725
Sse9I AATT 5 cut(s) 129, 239, 410, 2049, 2091
SspI AATATT 2 cut(s) 1209, 1414
SspMI CTAG 5 cut(s) 38, 929, 1176, 1991, 1995
SstI GAGCTC 1 cut(s) 1830
StyD4I CCNGG 3 cut(s) 868, 895, 976
StyI CCWWGG 2 cut(s) 355, 2130
TaaI ACNGT 7 cut(s) 23, 482, 789, 860, 1056, 1170, 1288
TaiI ACGT 4 cut(s) 348, 915, 1144, 2210
TaqI TCGA 4 cut(s) 461, 708, 1337, 1899
TasI AATT 5 cut(s) 129, 239, 410, 2049, 2091
TatI WGTACW 2 cut(s) 1086, 1761
TauI GCSGC 3 cut(s) 337, 559, 704
Tru1I TTAA 8 cut(s) 341, 659, 1160, 1419, 1832, 2006, 2145, 2190
Tru9I TTAA 8 cut(s) 341, 659, 1160, 1419, 1832, 2006, 2145, 2190
TscAI CASTG 5 cut(s) 574, 953, 1059, 1293, 1986
TseI GCWGC 6 cut(s) 360, 486, 553, 1012, 1595, 1886
TspGWI ACGGA 5 cut(s) 204, 392, 876, 1460, 1799
TspRI CASTG 5 cut(s) 574, 953, 1059, 1293, 1986
VpaK11BI GGWCC 1 cut(s) 1966
XapI RAATTY 2 cut(s) 410, 2091
XmiI GTMKAC 1 cut(s) 909
XmnI GAANNNNTTC 3 cut(s) 681, 887, 1133
XspI CTAG 5 cut(s) 38, 929, 1176, 1991, 1995
ZrmI AGTACT 1 cut(s) 1763
Zsp2I ATGCAT 2 cut(s) 32, 2200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.