FvH4_1g22960

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
14862503 .. 14864866
2364 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g22960.t1

Sequence Viewer

Length: 1737 bp
ATGGCTACATTGCAGTTCCAAGCACTGTCTATTACTGTGTTCTTGTTGTCTATGAGTACCGGTACTTCAACACCGCTAGTATCAGAAGAAGCAGCAGCACACTCGTTAGCACCAATGACAAAGCCTGGTTGTTCATCGCATTGCGGAGATGTCGAAATCCCATATCCGTTTGGAATTGAACCAGGTTGCTACATTAATGAATGGTTCCAAATACTCTGCGAATACTCCACTGGGTATGCCAAGCCTTTCTTGAACCTCATGCATCTGGAGGTGTGGGAAATATCTATTGCAGGCACGATAAGGGTCACAAACCCAATGATCTTCTCTAATTGCAGTCAGTCCAGTCACAACCCGCTCAATGCTGTCCGGACATTCACTCTAGAGGGAAGCCCTTTCCTGTTCTCAAACAAAAACAGGTTCACTTCAATCGGTTGCGGTGGAACTGCCCTGATGATGACCTCAGATGGAGATCCAGTTGGTGGTTGCTTGTCTATTTGTGAGGTGGGATATTCTTTTCCTACTCCTAGCAGTACTGGGAAAATAGTAAGCTATGATAGTTGCAGTGGTATAAACTGCTGCCAGACCACTATTCCACTCTATGACCTTTATCTTTATGCCTTCAATACTAGGTTCCAGAAGTTGAGTGGTAAGATTGGAAGTGCCTGCAATCATGAATTCCTGGTAGACCTGGATTGGTTTATATTAAACTCAATAAACATTTCTCCAGCTGGTGAAATATTTGACTCCATCCCTATAGTGCTGGAATGGAACTTATATAACTACTCGCCTCCTGCTACTGATGATGATGGGCTTTCAAGGAAATCCATATCTTCTTCAGGGATGTCAAGGCGTTGGACTACTCTTCCTATTCGCAGTCACACGCAACAATTATCTACAGGTGAAGTCCATGTTGAGAAAATTAAGTTGTTCACTTCCAAGGAGTTGCACAAAGCCACAAACGAGTTTAATGTAAATAGAGTTCTTGGCCACGGAAGTCAAGGTACTGTTTACAAAGGGATGTTGGAAGATGGGAGAATTGTTGCTGTCAAGAAGTCCACAGCAGTTGATGGAGGCGAAGTTGAACAGTTCATCAATGAGATTTCCGTTCTTTCGCAAATCAACCACAGAAATGTGGTCAAGCTACTAGGTTGTTGCTTAGAGACAGAAGTCCCTCTTTTGGTGGAAATGCGCTTACGAGTTTCTATGCAAGTTGCGGCAGCTCTTTCCTACTTTCATTCCTCTACTTGCTTGCCAATTTACCATCGAGATATTAAGTCTGGTAACATACTCCTGGATGGCAAGTTCAATGCCAAAGTAGCAGATTTTGGAACTTCAAGATCCATCACCATTGACAAAACACACCTTACAACACTAGTAAAAGGAACAATTGGTTATGTAGATCCAGGATATTTTCAATCTAGCCAATTTACGGACAAGAGTGATGTCTATAGCTTTGGAGTGGTCCTTGTTGAGCTCCTGACTGGACAAAAACCAGTTTTCTTGATACAATCTGATGAAGAATGGAAAAGCCTAGCAACTCATTTCATTGAGTCCATGGAAGAAAATAGTGTGTTTGGCATTATTGATGAGCGAGTTATGAAAGATGGTGGGAAGGAAGAGATCATGGCAGCTGCTAACCTTGCAAGAAGATGCTTGGATTTGAATGGAAAGAAACGTCCAACTATGAAAGAAGTGGCAGTGAAGCTAGAGGAAATTCTACTGTTAGTTACTAGCTAG

Protein Analysis

579

Amino Acids

63.65

Weight (kDa)

5.67

Isoelectric Point (pI)

39.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 44 - 103 4.6e-10 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 322 - 392 4.2e-10 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 324 - 394 4.5e-11 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 394 - 568 2e-24 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 400 - 565 1.6e-26 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 479
AccBSI CCGCTC 1 cut(s) 355
AccI GTMKAC 1 cut(s) 684
AccIII TCCGGA 1 cut(s) 366
AciI CCGC 5 cut(s) 74, 144, 353, 435, 1214
AclWI GGATC 3 cut(s) 464, 1332, 1394
AcoI YGGCCR 1 cut(s) 985
AcsI RAATTY 2 cut(s) 674, 1713
AcuI CTGAAG 1 cut(s) 819
AfaI GTAC 4 cut(s) 58, 64, 532, 1003
AfiI CCNNNNNNNGG 3 cut(s) 479, 1177, 1429
AgeI ACCGGT 1 cut(s) 59
AhlI ACTAGT 1 cut(s) 1372
AjnI CCWGG 6 cut(s) 124, 181, 678, 687, 1290, 1402
AloI GAACNNNNNNTCC 2 cut(s) 1286, 1318
AluBI AGCT 9 cut(s) 549, 728, 1141, 1220, 1452, 1474, 1631, 1705, 1734
AluI AGCT 9 cut(s) 549, 728, 1141, 1220, 1452, 1474, 1631, 1705, 1734
Alw21I GWGCWC 1 cut(s) 1476
Alw26I GTCTC 1 cut(s) 1154
AlwI GGATC 3 cut(s) 464, 1332, 1394
Aor13HI TCCGGA 1 cut(s) 366
AoxI GGCC 1 cut(s) 985
ApeKI GCWGC 6 cut(s) 92, 95, 576, 1217, 1628, 1631
ApoI RAATTY 2 cut(s) 674, 1713
AseI ATTAAT 1 cut(s) 195
AsiGI ACCGGT 1 cut(s) 59
AspLEI GCGC 1 cut(s) 1191
AspS9I GGNCC 1 cut(s) 1462
AsuHPI GGTGA 3 cut(s) 743, 911, 1336
AvaII GGWCC 1 cut(s) 1462
BalI TGGCCA 1 cut(s) 987
BanII GRGCYC 1 cut(s) 1476
BarI GAAGNNNNNNTAC 4 cut(s) 49, 81, 985, 1017
Bbv12I GWGCWC 1 cut(s) 1476
BbvI GCAGC 6 cut(s) 104, 107, 563, 1229, 1618, 1640
BccI CCATC 9 cut(s) 458, 755, 800, 1022, 1061, 1269, 1289, 1349, 1598
BcgI CGANNNNNNTGC 2 cut(s) 84, 118
BciT130I CCWGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
BcoDI GTCTC 1 cut(s) 1154
BcuI ACTAGT 1 cut(s) 1372
BfmI CTRYAG 3 cut(s) 753, 894, 1447
BisI GCNGC 7 cut(s) 93, 96, 577, 1215, 1218, 1629, 1632
BlsI GCNGC 7 cut(s) 94, 97, 578, 1216, 1219, 1630, 1633
BmcAI AGTACT 1 cut(s) 532
Bme1390I CCNGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
Bme18I GGWCC 1 cut(s) 1462
BmgT120I GGNCC 1 cut(s) 1462
BmiI GGNNCC 2 cut(s) 206, 632
BmrFI CCNGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
BmrI ACTGGG 2 cut(s) 240, 543
BmsI GCATC 2 cut(s) 271, 1640
BmuI ACTGGG 2 cut(s) 240, 543
BoxI GACNNNNGTC 1 cut(s) 1166
BpmI CTGGAG 2 cut(s) 287, 708
BsaBI GATNNNNATC 1 cut(s) 468
BsaJI CCNNGG 3 cut(s) 936, 988, 1554
BsaWI WCCGGW 2 cut(s) 59, 366
BsaXI ACNNNNNCTCC 4 cut(s) 459, 489, 1062, 1092
Bsc4I CCNNNNNNNGG 3 cut(s) 479, 1177, 1429
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 6 cut(s) 235, 342, 473, 538, 1486, 1493
Bse3DI GCAATG 2 cut(s) 8, 139
Bse8I GATNNNNATC 1 cut(s) 468
BseAI TCCGGA 1 cut(s) 366
BseBI CCWGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
BseDI CCNNGG 3 cut(s) 936, 988, 1554
BseGI GGATG 4 cut(s) 747, 846, 1023, 1300
BseJI GATNNNNATC 1 cut(s) 468
BseLI CCNNNNNNNGG 3 cut(s) 479, 1177, 1429
BseMI GCAATG 2 cut(s) 8, 139
BseMII CTCAG 1 cut(s) 474
BseNI ACTGG 6 cut(s) 235, 342, 473, 538, 1486, 1493
BseXI GCAGC 6 cut(s) 104, 107, 563, 1229, 1618, 1640
BshFI GGCC 1 cut(s) 987
BshTI ACCGGT 1 cut(s) 59
BsiHKAI GWGCWC 1 cut(s) 1476
BsiSI CCGG 2 cut(s) 60, 367
BslFI GGGAC 1 cut(s) 1154
BslI CCNNNNNNNGG 3 cut(s) 479, 1177, 1429
BsmAI GTCTC 1 cut(s) 1154
BsmFI GGGAC 1 cut(s) 1154
BsnI GGCC 1 cut(s) 987
Bsp1286I GDGCHC 1 cut(s) 1476
Bsp13I TCCGGA 1 cut(s) 366
Bsp143I GATC 5 cut(s) 318, 469, 1337, 1399, 1620
Bsp19I CCATGG 1 cut(s) 1554
BspACI CCGC 5 cut(s) 74, 144, 353, 435, 1214
BspANI GGCC 1 cut(s) 987
BspCNI CTCAG 1 cut(s) 473
BspEI TCCGGA 1 cut(s) 366
BspHI TCATGA 1 cut(s) 670
BspLI GGNNCC 2 cut(s) 206, 632
BspPI GGATC 3 cut(s) 464, 1332, 1394
BsrBI CCGCTC 1 cut(s) 355
BsrDI GCAATG 2 cut(s) 8, 139
BsrFI RCCGGY 1 cut(s) 59
BsrI ACTGG 6 cut(s) 235, 342, 473, 538, 1486, 1493
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 3 cut(s) 936, 988, 1554
BssMI GATC 5 cut(s) 318, 469, 1337, 1399, 1620
BssT1I CCWWGG 2 cut(s) 936, 1554
Bst2UI CCWGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
Bst4CI ACNGT 5 cut(s) 27, 37, 1006, 1086, 1722
Bst6I CTCTTC 2 cut(s) 867, 1611
BstC8I GCNNGC 3 cut(s) 292, 664, 1250
BstDEI CTNAG 2 cut(s) 460, 1156
BstDSI CCRYGG 2 cut(s) 988, 1554
BstF5I GGATG 4 cut(s) 747, 846, 1023, 1300
BstHHI GCGC 1 cut(s) 1191
BstKTI GATC 5 cut(s) 321, 472, 1340, 1402, 1623
BstMAI GTCTC 1 cut(s) 1154
BstMBI GATC 5 cut(s) 318, 469, 1337, 1399, 1620
BstMWI GCNNNNNNNGC 2 cut(s) 1316, 1640
BstNI CCWGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
BstPAI GACNNNNGTC 1 cut(s) 1166
BstSCI CCNGG 6 cut(s) 124, 181, 678, 687, 1290, 1402
BstSFI CTRYAG 3 cut(s) 753, 894, 1447
BstV1I GCAGC 6 cut(s) 104, 107, 563, 1229, 1618, 1640
BstX2I RGATCY 3 cut(s) 469, 1337, 1399
BstYI RGATCY 3 cut(s) 469, 1337, 1399
BsuRI GGCC 1 cut(s) 987
BtgI CCRYGG 2 cut(s) 988, 1554
BtgZI GCGATG 1 cut(s) 120
BtsCI GGATG 4 cut(s) 747, 846, 1023, 1300
BtsI GCAGTG 2 cut(s) 568, 1704
BtsIMutI CAGTG 4 cut(s) 23, 228, 568, 1704
Cac8I GCNNGC 3 cut(s) 292, 664, 1250
CciI TCATGA 1 cut(s) 670
CfoI GCGC 1 cut(s) 1191
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 1 cut(s) 1462
CsiI ACCWGGT 1 cut(s) 181
Csp6I GTAC 4 cut(s) 57, 63, 531, 1002
CspAI ACCGGT 1 cut(s) 59
CspCI CAANNNNNGTGG 2 cut(s) 1045, 1080
CviAII CATG 5 cut(s) 259, 671, 908, 1555, 1624
CviQI GTAC 4 cut(s) 57, 63, 531, 1002
DdeI CTNAG 2 cut(s) 460, 1156
DpnI GATC 5 cut(s) 320, 471, 1339, 1401, 1622
DpnII GATC 5 cut(s) 318, 469, 1337, 1399, 1620
EaeI YGGCCR 1 cut(s) 985
Eam1104I CTCTTC 2 cut(s) 867, 1611
EarI CTCTTC 2 cut(s) 867, 1611
Ecl136II GAGCTC 1 cut(s) 1474
Eco130I CCWWGG 2 cut(s) 936, 1554
Eco24I GRGCYC 1 cut(s) 1476
Eco47I GGWCC 1 cut(s) 1462
Eco53kI GAGCTC 1 cut(s) 1474
Eco57I CTGAAG 1 cut(s) 819
EcoICRI GAGCTC 1 cut(s) 1474
EcoRI GAATTC 1 cut(s) 674
EcoRII CCWGG 6 cut(s) 124, 181, 678, 687, 1290, 1402
EcoT14I CCWWGG 2 cut(s) 936, 1554
EcoT22I ATGCAT 1 cut(s) 264
EcoT38I GRGCYC 1 cut(s) 1476
ErhI CCWWGG 2 cut(s) 936, 1554
FaeI CATG 5 cut(s) 262, 674, 911, 1558, 1627
FalI AAGNNNNNCTT 4 cut(s) 233, 265, 1158, 1190
FaqI GGGAC 1 cut(s) 1154
FatI CATG 5 cut(s) 258, 670, 907, 1554, 1623
FauI CCCGC 1 cut(s) 360
FblI GTMKAC 1 cut(s) 684
Fnu4HI GCNGC 7 cut(s) 93, 96, 577, 1215, 1218, 1629, 1632
FokI GGATG 4 cut(s) 734, 853, 1030, 1307
FriOI GRGCYC 1 cut(s) 1476
Fsp4HI GCNGC 7 cut(s) 93, 96, 577, 1215, 1218, 1629, 1632
GlaI GCGC 1 cut(s) 1190
GluI GCNGC 7 cut(s) 93, 96, 577, 1215, 1218, 1629, 1632
GsuI CTGGAG 2 cut(s) 287, 708
HaeIII GGCC 1 cut(s) 987
HapII CCGG 2 cut(s) 60, 367
HhaI GCGC 1 cut(s) 1191
Hin1II CATG 5 cut(s) 262, 674, 911, 1558, 1627
Hin6I GCGC 1 cut(s) 1189
HinP1I GCGC 1 cut(s) 1189
HinfI GANTC 2 cut(s) 743, 1550
HpaII CCGG 2 cut(s) 60, 367
HphI GGTGA 3 cut(s) 743, 911, 1336
Hpy166II GTNNAC 5 cut(s) 420, 685, 930, 1009, 1056
Hpy188I TCNGA 3 cut(s) 85, 463, 1513
Hpy8I GTNNAC 5 cut(s) 420, 685, 930, 1009, 1056
HpyAV CCTTC 2 cut(s) 628, 1606
HpyCH4III ACNGT 5 cut(s) 27, 37, 1006, 1086, 1722
HpyCH4IV ACGT 1 cut(s) 1675
HpyCH4V TGCA 9 cut(s) 13, 262, 290, 333, 561, 666, 946, 1207, 1643
HpyF10VI GCNNNNNNNGC 2 cut(s) 1316, 1640
HpyF3I CTNAG 2 cut(s) 460, 1156
HpySE526I ACGT 1 cut(s) 1675
Hsp92II CATG 5 cut(s) 262, 674, 911, 1558, 1627
HspAI GCGC 1 cut(s) 1189
Kpn2I TCCGGA 1 cut(s) 366
Kzo9I GATC 5 cut(s) 318, 469, 1337, 1399, 1620
LmnI GCTCC 1 cut(s) 1479
Lsp1109I GCAGC 6 cut(s) 104, 107, 563, 1229, 1618, 1640
LweI GCATC 2 cut(s) 271, 1640
MabI ACCWGGT 1 cut(s) 181
MaeII ACGT 1 cut(s) 1675
MaeIII GTNAC 5 cut(s) 304, 344, 875, 1280, 1726
MalI GATC 5 cut(s) 320, 471, 1339, 1401, 1622
MbiI CCGCTC 1 cut(s) 355
MboI GATC 5 cut(s) 318, 469, 1337, 1399, 1620
MfeI CAATTG 1 cut(s) 1386
MflI RGATCY 3 cut(s) 469, 1337, 1399
MhlI GDGCHC 1 cut(s) 1476
MlsI TGGCCA 1 cut(s) 987
MluNI TGGCCA 1 cut(s) 987
MlyI GAGTC 2 cut(s) 737, 1559
MmeI TCCRAC 3 cut(s) 833, 1002, 1703
Mox20I TGGCCA 1 cut(s) 987
Mph1103I ATGCAT 1 cut(s) 264
MroI TCCGGA 1 cut(s) 366
MscI TGGCCA 1 cut(s) 987
MseI TTAA 5 cut(s) 195, 704, 921, 966, 1272
MslI CAYNNNNRTG 1 cut(s) 1128
Msp20I TGGCCA 1 cut(s) 987
MspA1I CMGCKG 2 cut(s) 728, 1631
MspI CCGG 2 cut(s) 60, 367
MspR9I CCNGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
MunI CAATTG 1 cut(s) 1386
MvaI CCWGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
MwoI GCNNNNNNNGC 2 cut(s) 1316, 1640
NcoI CCATGG 1 cut(s) 1554
NdeII GATC 5 cut(s) 318, 469, 1337, 1399, 1620
NlaIII CATG 5 cut(s) 262, 674, 911, 1558, 1627
NlaIV GGNNCC 2 cut(s) 206, 632
NmuCI GTSAC 3 cut(s) 304, 344, 875
NsiI ATGCAT 1 cut(s) 264
PagI TCATGA 1 cut(s) 670
PflMI CCANNNNNTGG 1 cut(s) 479
PfoI TCCNGGA 2 cut(s) 1290, 1402
PinAI ACCGGT 1 cut(s) 59
PkrI GCNGC 7 cut(s) 94, 97, 578, 1216, 1219, 1630, 1633
PleI GAGTC 2 cut(s) 737, 1558
PpsI GAGTC 2 cut(s) 737, 1558
PshAI GACNNNNGTC 1 cut(s) 1166
PshBI ATTAAT 1 cut(s) 195
Psp124BI GAGCTC 1 cut(s) 1476
Psp6I CCWGG 6 cut(s) 124, 181, 678, 687, 1290, 1402
PspGI CCWGG 6 cut(s) 124, 181, 678, 687, 1290, 1402
PspN4I GGNNCC 2 cut(s) 206, 632
PspPI GGNCC 1 cut(s) 1462
PsrI GAACNNNNNNTAC 2 cut(s) 963, 995
PsuI RGATCY 3 cut(s) 469, 1337, 1399
PvuII CAGCTG 2 cut(s) 728, 1631
RsaI GTAC 4 cut(s) 58, 64, 532, 1003
RsaNI GTAC 4 cut(s) 57, 63, 531, 1002
RseI CAYNNNNRTG 1 cut(s) 1128
SacI GAGCTC 1 cut(s) 1476
SaqAI TTAA 5 cut(s) 195, 704, 921, 966, 1272
SatI GCNGC 7 cut(s) 93, 96, 577, 1215, 1218, 1629, 1632
Sau3AI GATC 5 cut(s) 318, 469, 1337, 1399, 1620
Sau96I GGNCC 1 cut(s) 1462
ScaI AGTACT 1 cut(s) 532
SchI GAGTC 2 cut(s) 737, 1559
ScrFI CCNGG 6 cut(s) 126, 183, 680, 689, 1292, 1404
SduI GDGCHC 1 cut(s) 1476
SexAI ACCWGGT 1 cut(s) 181
SfaNI GCATC 2 cut(s) 271, 1640
SfcI CTRYAG 3 cut(s) 753, 894, 1447
SinI GGWCC 1 cut(s) 1462
SmiMI CAYNNNNRTG 1 cut(s) 1128
SpeI ACTAGT 1 cut(s) 1372
SsiI CCGC 5 cut(s) 74, 144, 353, 435, 1214
SspI AATATT 1 cut(s) 738
SstI GAGCTC 1 cut(s) 1476
StyD4I CCNGG 6 cut(s) 124, 181, 678, 687, 1290, 1402
StyI CCWWGG 2 cut(s) 936, 1554
TaaI ACNGT 5 cut(s) 27, 37, 1006, 1086, 1722
TaiI ACGT 1 cut(s) 1678
TaqI TCGA 2 cut(s) 153, 1264
TatI WGTACW 1 cut(s) 530
TauI GCSGC 1 cut(s) 1217
Tru1I TTAA 5 cut(s) 195, 704, 921, 966, 1272
Tru9I TTAA 5 cut(s) 195, 704, 921, 966, 1272
TscAI CASTG 4 cut(s) 30, 235, 568, 1704
TseFI GTSAC 3 cut(s) 304, 344, 875
TseI GCWGC 6 cut(s) 92, 95, 576, 1217, 1628, 1631
Tsp45I GTSAC 3 cut(s) 304, 344, 875
TspDTI ATGAA 9 cut(s) 123, 213, 687, 1078, 1223, 1530, 1534, 1613, 1700
TspGWI ACGGA 4 cut(s) 156, 1005, 1093, 1445
TspRI CASTG 4 cut(s) 30, 235, 568, 1704
Van91I CCANNNNNTGG 1 cut(s) 479
VpaK11BI GGWCC 1 cut(s) 1462
VspI ATTAAT 1 cut(s) 195
XapI RAATTY 2 cut(s) 674, 1713
XbaI TCTAGA 1 cut(s) 379
XcmI CCANNNNNNNNNTGG 1 cut(s) 641
XmiI GTMKAC 1 cut(s) 684
ZrmI AGTACT 1 cut(s) 532
Zsp2I ATGCAT 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.