RchiOBHm_Chr3g0469631

Wall-associated receptor kinase galacturonan-binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000052
Physical Location & Seq
Forward (+)
15430540 .. 15434915
4376 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43546

Sequence Viewer

Length: 1491 bp
ATGTGTCCGCCAGGCTATGAAGGAAATCCCTACCTTCTCTTACCTTGTGGAGATATTGATGAATGCAAGGATGGTAATCCGTGCCAGGGTGATGATCTTAATACAACTACTACATGGAACATTAGTAATGCCAAATGTCAGAACACTGACGGGGGTCATATATGCTACTCAAATAGAACAGGGGAAACCTGCGAATTGTTTGCCTCTGACAGAGTTGCTAAGTGCTACCATCAAAGTAGGCCTCACTCTCAGCTCAAGCCTATTCTCTCAGGTCTCGGTGCTGGTATTGGACTGTTGTCATTGCTTAGTGGTGCATGGTGGGTATACAAGTTTGTAAAGAAATGGAAGAAGATTAAACGTAAGGAGATGTTTTACAAACGAAATGGTGGTCTATTGCTAGAACAACAATTATCGTCAGGTGATATTAACGTTGAGAGAATCAAATTGTTCAAATGCAAGGAGTTACAGAGGTCTACAAACAATTTCAATGCTGATAGAATTATTGGTCAAGGGGGGCAAGGTACTGTTTATAAAGGCATGTTGATGGATGGAAGAATTGTGGCTGTTAAAAAGTCAAAAATTGTAGACGAGGCAAAGCTTTCAGAATTCATCAATGAGGTTGTCATTCTTTCTCAAATCAACCACAGGAATATCGTTCAACTATTGGGTTGTTGTCTAGAGACGGAAGTTCCTCTTTTGGTATATGAGTTTATACCTAACGGAAACTTATCTCAGTACATCCATGACCAGACCGAAGACTTTCCACTTACATGGGAGATTCGTTTACGAATTGCTACAGAAATTGCAGGAGCTCTTTCCTACTTACATGCTTCAGCTTCGTTTCCCATTTATCACAGGGACATCAAGTCTACAAACATACTCTTGGATGATAAATATAGAGCAAAAATTGCTGACTTTGGAACTTCAAGATTAGTTACCATTGACCAAACGCACTTGACCACAAACGTACATGGCACATTTGGTTATTTGGATCCTGAATACTACCAATCGAGTCAATTTACTGAGAAAAGTGACGTCTACAGCTTTGGAGTGGTGCTTGTTGAGCTCTTGACAGGAAAAAAACCAGTAACAAGGTCAGCCGAAGGCGAAACATACAAGAGTCTTGCCACATATTTTATTGTTTCGTTGCAGGAAGATTCTCTATTTGACATTCTTGATGCTCGAGTAGTGAATGAAGGCTCTAAACATGGTATTATGGTAGTCGCTAATCTTGCAAAGCGATGTTTAAATTTGAATGGAAGAAAGCGCCCTACGATGAGAGAGATCACAGCAGAGTTGGAGACCATCCAATTATCGGAGAAACTTGCCGACGCTCGTCAACCAAGTTGTGAAAGGATTGAATCTGGCCAAGATTATCGAATCGAGCAGTGGGATGACGTTGTTTCTAGCTCCACAATGTCAACTTGGGAAGGTGCTCCGACTCCATCATCAGTTGAACTGCTTCCACTAGTTTCTATGAAGACATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

496

Amino Acids

55.66

Weight (kDa)

6.25

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 163 - 430 7.4e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 164 - 433 3.5e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 531
AatII GACGTC 1 cut(s) 1038
Acc36I ACCTGC 1 cut(s) 197
AccI GTMKAC 5 cut(s) 324, 473, 585, 869, 1038
AciI CCGC 1 cut(s) 8
AclI AACGTT 1 cut(s) 429
AclWI GGATC 2 cut(s) 986, 999
AcoI YGGCCR 1 cut(s) 1366
AcsI RAATTY 2 cut(s) 605, 1249
AcuI CTGAAG 1 cut(s) 816
AcyI GRCGYC 1 cut(s) 1035
AfaI GTAC 3 cut(s) 523, 737, 969
AfiI CCNNNNNNNGG 2 cut(s) 86, 1315
AflIII ACRYGT 1 cut(s) 1484
AgsI TTSAA 7 cut(s) 451, 487, 659, 927, 1255, 1361, 1457
AhdI GACNNNNNGTC 1 cut(s) 865
AhlI ACTAGT 1 cut(s) 1468
AjnI CCWGG 2 cut(s) 10, 84
AluBI AGCT 7 cut(s) 253, 598, 812, 836, 1044, 1066, 1410
AluI AGCT 7 cut(s) 253, 598, 812, 836, 1044, 1066, 1410
Alw21I GWGCWC 3 cut(s) 814, 1068, 1438
Alw26I GTCTC 3 cut(s) 278, 674, 1295
AlwI GGATC 2 cut(s) 986, 999
Ama87I CYCGRG 1 cut(s) 1182
AoxI GGCC 2 cut(s) 239, 1366
ApoI RAATTY 2 cut(s) 605, 1249
ArsI GACNNNNNNTTYG 2 cut(s) 373, 405
Asp700I GAANNNNTTC 2 cut(s) 759, 1461
AspLEI GCGC 1 cut(s) 1269
AsuHPI GGTGA 2 cut(s) 101, 431
AvaI CYCGRG 1 cut(s) 1182
BalI TGGCCA 1 cut(s) 1368
BamHI GGATCC 1 cut(s) 991
BanII GRGCYC 2 cut(s) 814, 1068
BbsI GAAGAC 2 cut(s) 762, 1487
Bbv12I GWGCWC 3 cut(s) 814, 1068, 1438
BccI CCATC 6 cut(s) 65, 237, 538, 542, 1313, 1453
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BciT130I CCWGG 2 cut(s) 12, 86
BcoDI GTCTC 3 cut(s) 278, 674, 1295
BcuI ACTAGT 1 cut(s) 1468
BfaI CTAG 4 cut(s) 398, 677, 1407, 1469
BfmI CTRYAG 2 cut(s) 795, 1039
BfoI RGCGCY 1 cut(s) 1270
BfuAI ACCTGC 1 cut(s) 197
Bme1390I CCNGG 2 cut(s) 12, 86
BmeRI GACNNNNNGTC 1 cut(s) 865
BmeT110I CYCGRG 1 cut(s) 1182
BmiI GGNNCC 1 cut(s) 993
BmrFI CCNGG 2 cut(s) 12, 86
BmsI GCATC 1 cut(s) 1168
BoxI GACNNNNGTC 3 cut(s) 153, 295, 1335
BpiI GAAGAC 2 cut(s) 762, 1487
BpuEI CTTGAG 1 cut(s) 239
BsaBI GATNNNNATC 1 cut(s) 75
BsaHI GRCGYC 1 cut(s) 1035
BsaI GGTCTC 2 cut(s) 278, 1295
BsaJI CCNNGG 1 cut(s) 85
Bsc4I CCNNNNNNNGG 2 cut(s) 86, 1315
Bse1I ACTGG 1 cut(s) 1085
Bse3DI GCAATG 1 cut(s) 299
Bse8I GATNNNNATC 1 cut(s) 75
BseBI CCWGG 2 cut(s) 12, 86
BseDI CCNNGG 1 cut(s) 85
BseGI GGATG 6 cut(s) 76, 553, 738, 892, 1305, 1399
BseJI GATNNNNATC 1 cut(s) 75
BseLI CCNNNNNNNGG 2 cut(s) 86, 1315
BseMI GCAATG 1 cut(s) 299
BseMII CTCAG 4 cut(s) 263, 282, 746, 1014
BseNI ACTGG 1 cut(s) 1085
BshFI GGCC 2 cut(s) 241, 1368
BsiHKAI GWGCWC 3 cut(s) 814, 1068, 1438
BsiHKCI CYCGRG 1 cut(s) 1182
BslFI GGGAC 1 cut(s) 872
BslI CCNNNNNNNGG 2 cut(s) 86, 1315
BsmAI GTCTC 3 cut(s) 278, 674, 1295
BsmBI CGTCTC 1 cut(s) 674
BsmFI GGGAC 1 cut(s) 872
BsmI GAATGC 1 cut(s) 68
BsnI GGCC 2 cut(s) 241, 1368
Bso31I GGTCTC 2 cut(s) 278, 1295
BsoBI CYCGRG 1 cut(s) 1182
Bsp1286I GDGCHC 3 cut(s) 814, 1068, 1438
Bsp143I GATC 3 cut(s) 94, 991, 1284
BspACI CCGC 1 cut(s) 8
BspANI GGCC 2 cut(s) 241, 1368
BspCNI CTCAG 4 cut(s) 262, 281, 745, 1015
BspLI GGNNCC 1 cut(s) 993
BspMI ACCTGC 1 cut(s) 197
BspPI GGATC 2 cut(s) 986, 999
BspTNI GGTCTC 2 cut(s) 278, 1295
BsrDI GCAATG 1 cut(s) 299
BsrI ACTGG 1 cut(s) 1085
BssECI CCNNGG 1 cut(s) 85
BssMI GATC 3 cut(s) 94, 991, 1284
BssNAI GTATAC 1 cut(s) 325
BssNI GRCGYC 1 cut(s) 1035
Bst1107I GTATAC 1 cut(s) 325
Bst2UI CCWGG 2 cut(s) 12, 86
Bst4CI ACNGT 2 cut(s) 294, 526
BstACI GRCGYC 1 cut(s) 1035
BstAPI GCANNNNNTGC 1 cut(s) 908
BstDEI CTNAG 6 cut(s) 219, 249, 268, 305, 732, 1023
BstF5I GGATG 6 cut(s) 76, 553, 738, 892, 1305, 1399
BstH2I RGCGCY 1 cut(s) 1270
BstHHI GCGC 1 cut(s) 1269
BstKTI GATC 3 cut(s) 97, 994, 1287
BstMAI GTCTC 3 cut(s) 278, 674, 1295
BstMBI GATC 3 cut(s) 94, 991, 1284
BstMWI GCNNNNNNNGC 3 cut(s) 908, 1063, 1232
BstNI CCWGG 2 cut(s) 12, 86
BstNSI RCATGY 3 cut(s) 541, 830, 1488
BstPAI GACNNNNGTC 3 cut(s) 153, 295, 1335
BstSCI CCNGG 2 cut(s) 10, 84
BstSFI CTRYAG 2 cut(s) 795, 1039
BstV2I GAAGAC 2 cut(s) 762, 1487
BstX2I RGATCY 1 cut(s) 991
BstXI CCANNNNNNTGG 1 cut(s) 771
BstYI RGATCY 1 cut(s) 991
BstZ17I GTATAC 1 cut(s) 325
BsuRI GGCC 2 cut(s) 241, 1368
BtgZI GCGATG 1 cut(s) 1255
BtsCI GGATG 6 cut(s) 76, 553, 738, 892, 1305, 1399
BtsI GCAGTG 1 cut(s) 1394
BtsIMutI CAGTG 2 cut(s) 144, 1394
BveI ACCTGC 1 cut(s) 197
CfoI GCGC 1 cut(s) 1269
CseI GACGC 1 cut(s) 1340
Csp6I GTAC 3 cut(s) 522, 736, 968
CviAII CATG 9 cut(s) 114, 315, 538, 743, 771, 827, 971, 1208, 1485
CviQI GTAC 3 cut(s) 522, 736, 968
DdeI CTNAG 6 cut(s) 219, 249, 268, 305, 732, 1023
DpnI GATC 3 cut(s) 96, 993, 1286
DpnII GATC 3 cut(s) 94, 991, 1284
DraI TTTAAA 1 cut(s) 1248
DriI GACNNNNNGTC 1 cut(s) 865
EaeI YGGCCR 1 cut(s) 1366
Eam1105I GACNNNNNGTC 1 cut(s) 865
Ecl136II GAGCTC 2 cut(s) 812, 1066
Eco147I AGGCCT 1 cut(s) 241
Eco24I GRGCYC 2 cut(s) 814, 1068
Eco31I GGTCTC 2 cut(s) 278, 1295
Eco53kI GAGCTC 2 cut(s) 812, 1066
Eco57I CTGAAG 1 cut(s) 816
Eco88I CYCGRG 1 cut(s) 1182
EcoICRI GAGCTC 2 cut(s) 812, 1066
EcoRI GAATTC 1 cut(s) 605
EcoRII CCWGG 2 cut(s) 10, 84
EcoT38I GRGCYC 2 cut(s) 814, 1068
Esp3I CGTCTC 1 cut(s) 674
FaeI CATG 9 cut(s) 117, 318, 541, 746, 774, 830, 974, 1211, 1488
FalI AAGNNNNNCTT 2 cut(s) 678, 710
FaqI GGGAC 1 cut(s) 872
FatI CATG 9 cut(s) 113, 314, 537, 742, 770, 826, 970, 1207, 1484
FblI GTMKAC 5 cut(s) 324, 473, 585, 869, 1038
FokI GGATG 6 cut(s) 83, 560, 725, 899, 1292, 1406
FriOI GRGCYC 2 cut(s) 814, 1068
FspBI CTAG 4 cut(s) 398, 677, 1407, 1469
GlaI GCGC 1 cut(s) 1268
HaeII RGCGCY 1 cut(s) 1270
HaeIII GGCC 2 cut(s) 241, 1368
HgaI GACGC 1 cut(s) 1340
HhaI GCGC 1 cut(s) 1269
Hin1I GRCGYC 1 cut(s) 1035
Hin1II CATG 9 cut(s) 117, 318, 541, 746, 774, 830, 974, 1211, 1488
Hin6I GCGC 1 cut(s) 1267
HinP1I GCGC 1 cut(s) 1267
HincII GTYRAC 2 cut(s) 1340, 1422
HindII GTYRAC 2 cut(s) 1340, 1422
HindIII AAGCTT 1 cut(s) 596
HinfI GANTC 8 cut(s) 438, 778, 1012, 1120, 1157, 1361, 1380, 1441
HphI GGTGA 2 cut(s) 101, 431
Hpy166II GTNNAC 8 cut(s) 325, 474, 586, 785, 870, 1039, 1340, 1422
Hpy188I TCNGA 5 cut(s) 141, 208, 604, 1318, 1440
Hpy188III TCNNGA 5 cut(s) 677, 927, 995, 1069, 1175
Hpy8I GTNNAC 8 cut(s) 325, 474, 586, 785, 870, 1039, 1340, 1422
Hpy99I CGWCG 1 cut(s) 1334
HpyAV CCTTC 5 cut(s) 14, 44, 1097, 1190, 1424
HpyCH4III ACNGT 2 cut(s) 294, 526
HpyCH4IV ACGT 5 cut(s) 358, 429, 966, 1035, 1398
HpyCH4V TGCA 6 cut(s) 66, 314, 456, 806, 1150, 1235
HpyF10VI GCNNNNNNNGC 3 cut(s) 908, 1063, 1232
HpyF3I CTNAG 6 cut(s) 219, 249, 268, 305, 732, 1023
HpySE526I ACGT 5 cut(s) 358, 429, 966, 1035, 1398
Hsp92I GRCGYC 1 cut(s) 1035
Hsp92II CATG 9 cut(s) 117, 318, 541, 746, 774, 830, 974, 1211, 1488
HspAI GCGC 1 cut(s) 1267
Kzo9I GATC 3 cut(s) 94, 991, 1284
LmnI GCTCC 3 cut(s) 809, 1415, 1441
LweI GCATC 1 cut(s) 1168
MaeI CTAG 4 cut(s) 398, 677, 1407, 1469
MaeII ACGT 5 cut(s) 358, 429, 966, 1035, 1398
MaeIII GTNAC 4 cut(s) 462, 934, 1031, 1087
MalI GATC 3 cut(s) 96, 993, 1286
MboI GATC 3 cut(s) 94, 991, 1284
MboII GAAGA 6 cut(s) 358, 361, 564, 767, 1166, 1272
MflI RGATCY 1 cut(s) 991
MhlI GDGCHC 3 cut(s) 814, 1068, 1438
MlsI TGGCCA 1 cut(s) 1368
MluNI TGGCCA 1 cut(s) 1368
MlyI GAGTC 3 cut(s) 1021, 1129, 1435
MmeI TCCRAC 2 cut(s) 1278, 1463
MnlI CCTC 6 cut(s) 214, 252, 462, 583, 610, 702
Mox20I TGGCCA 1 cut(s) 1368
MroXI GAANNNNTTC 2 cut(s) 759, 1461
MscI TGGCCA 1 cut(s) 1368
MseI TTAA 5 cut(s) 99, 354, 426, 567, 1247
MslI CAYNNNNRTG 2 cut(s) 542, 769
Msp20I TGGCCA 1 cut(s) 1368
MspR9I CCNGG 2 cut(s) 12, 86
Mva1269I GAATGC 1 cut(s) 68
MvaI CCWGG 2 cut(s) 12, 86
MwoI GCNNNNNNNGC 3 cut(s) 908, 1063, 1232
NdeII GATC 3 cut(s) 94, 991, 1284
NlaIII CATG 9 cut(s) 117, 318, 541, 746, 774, 830, 974, 1211, 1488
NlaIV GGNNCC 1 cut(s) 993
NmuCI GTSAC 1 cut(s) 1031
NspI RCATGY 3 cut(s) 541, 830, 1488
PaeR7I CTCGAG 1 cut(s) 1182
PceI AGGCCT 1 cut(s) 241
PciI ACATGT 1 cut(s) 1484
PctI GAATGC 1 cut(s) 68
PdmI GAANNNNTTC 2 cut(s) 759, 1461
PfeI GAWTC 5 cut(s) 438, 778, 1157, 1361, 1380
PleI GAGTC 3 cut(s) 1020, 1128, 1435
PpsI GAGTC 3 cut(s) 1020, 1128, 1435
PscI ACATGT 1 cut(s) 1484
PshAI GACNNNNGTC 3 cut(s) 153, 295, 1335
PsiI TTATAA 1 cut(s) 531
Psp124BI GAGCTC 2 cut(s) 814, 1068
Psp1406I AACGTT 1 cut(s) 429
Psp6I CCWGG 2 cut(s) 10, 84
PspGI CCWGG 2 cut(s) 10, 84
PspN4I GGNNCC 1 cut(s) 993
PspXI VCTCGAGB 1 cut(s) 1182
PsuI RGATCY 1 cut(s) 991
RsaI GTAC 3 cut(s) 523, 737, 969
RsaNI GTAC 3 cut(s) 522, 736, 968
RseI CAYNNNNRTG 2 cut(s) 542, 769
SacI GAGCTC 2 cut(s) 814, 1068
SaqAI TTAA 5 cut(s) 99, 354, 426, 567, 1247
Sau3AI GATC 3 cut(s) 94, 991, 1284
SchI GAGTC 3 cut(s) 1021, 1129, 1435
ScrFI CCNGG 2 cut(s) 12, 86
SduI GDGCHC 3 cut(s) 814, 1068, 1438
SfaNI GCATC 1 cut(s) 1168
SfcI CTRYAG 2 cut(s) 795, 1039
Sfr274I CTCGAG 1 cut(s) 1182
SlaI CTCGAG 1 cut(s) 1182
SmiMI CAYNNNNRTG 2 cut(s) 542, 769
SmlI CTYRAG 2 cut(s) 254, 1182
SmoI CTYRAG 2 cut(s) 254, 1182
SpeI ACTAGT 1 cut(s) 1468
SseBI AGGCCT 1 cut(s) 241
SsiI CCGC 1 cut(s) 8
SspMI CTAG 4 cut(s) 398, 677, 1407, 1469
SstI GAGCTC 2 cut(s) 814, 1068
StuI AGGCCT 1 cut(s) 241
StyD4I CCNGG 2 cut(s) 10, 84
TaaI ACNGT 2 cut(s) 294, 526
TaiI ACGT 5 cut(s) 361, 432, 969, 1038, 1401
TaqI TCGA 4 cut(s) 1010, 1183, 1378, 1383
TaqII GACCGA 1 cut(s) 767
TatI WGTACW 1 cut(s) 735
TfiI GAWTC 5 cut(s) 438, 778, 1157, 1361, 1380
Tru1I TTAA 5 cut(s) 99, 354, 426, 567, 1247
Tru9I TTAA 5 cut(s) 99, 354, 426, 567, 1247
TscAI CASTG 2 cut(s) 151, 1394
TseFI GTSAC 1 cut(s) 1031
Tsp45I GTSAC 1 cut(s) 1031
TspDTI ATGAA 4 cut(s) 33, 75, 598, 1209
TspGWI ACGGA 3 cut(s) 69, 698, 735
TspRI CASTG 2 cut(s) 151, 1394
XapI RAATTY 2 cut(s) 605, 1249
XbaI TCTAGA 1 cut(s) 676
XceI RCATGY 3 cut(s) 541, 830, 1488
XhoI CTCGAG 1 cut(s) 1182
XmiI GTMKAC 5 cut(s) 324, 473, 585, 869, 1038
XmnI GAANNNNTTC 2 cut(s) 759, 1461
XspI CTAG 4 cut(s) 398, 677, 1407, 1469
ZraI GACGTC 1 cut(s) 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.