FvH4_3g10540

Wall-associated receptor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
6218324 .. 6220446
2123 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10540.t1

Sequence Viewer

Length: 1290 bp
ATGGGTATTGGGGCCTTTGGGGGAAATCAAGGTTTCAGAGGTTGGGGAGATGGAGAGAGGCACAGTACTGGCGGCAGTCTTGGACTAATACTTTTAGTCATTTCTGCATGGTGGTTGGACAAAGTCGTAAAGAAAAGGAAAAACAAAAGACAAAAGGAGAAGTGTTTTGAACGAAATGGTGGTTTAGTACTGGAGCAACAATTATCTTCTGGTGATCAAGCCAACGTTGAAAAAATTAAGTTGTTTAATTCTAGGGAGCTAGAGAAAGCCACGGACAACTTTAGCAGAGACAGAGTTCTTGGACAGGGAGGGCAAGGTACTGTTTACAAAGGAATGTTGATGGATGGACAAATTATTGCTGTCAAAAAGTCTAAAATAGTTAACGGAGGCGAAGTTGGGCAATTCATTAATGAAATTGTGATTCTTTCACAAGTTAACCACAGAAATGTGGTTAAACTATTAGGTTGTTGTTTGGAGACTGAAATTCCTCTCTTGGTTTACGAATTTCTCCCGAACGGAACACTTTCTCAGTACATTCATGACCAAGATGATGAGTTTCCTCTTACATGGGGGACGCGATTGCGAGTGTCTACCGAAGTTGCTGGAGCTCTTTCGTATTTACATTCGGCGGCTTCTATTCCTGTTTACCACCGGGACATCAAGTGCACAAACATACTCTTGGATGGCAAGTACAGAGCAAAAATTGCAGATTTTGGGACTTCAAGATCCATTTCCATTGACCAGACACACCTCACCACACTAGTACATGGAACATTTGGTTATTTGGACCCAGAGTACTTTCAATCAAGCCAATTTACAGAAAAGAGTGATGTTTACAGTTTCGGTGTAGTCCTTGCTGAGCTCTTGACCGGACAGAAACCAGTTTCCATGATGAGGTCGAAAGAAAGTAGAAGCCTAGCAACTCATTTCCTTCTATGCATGGAGCAGAATCGGTTGTTCGATATTCTTGATGCTCAAGTGATGAAAGATGGTAACAAAGAAGAAATTATAGCAGTTGCTAACCTTGCACAAAGATGCTTAAATTTGAATGGAAGGAAACGTCCTACTATGAAAGAAGTAGCAGCGGAATTGGAGGGAGTTCGATTGGCAGGCAAAGATGCTGATCATGTTCATCAAAATTTGGTAGAGAAAGGAGATGTTGAAACTCACGAAATAACAACGGAGGCTTATTGCGATGTTGTCTCTATGTCAACCGGTCCTTTTACAGATGGTGGCACAGCGGATTCTTCATTGGATGTACAGCCACTATTGTTTTACAAAACACAGTAG

Protein Analysis

430

Amino Acids

47.57

Weight (kDa)

6.29

Isoelectric Point (pI)

31.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 95 - 361 2.4e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 97 - 364 3.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 590
AccII CGCG 1 cut(s) 577
AciI CCGC 4 cut(s) 72, 629, 1085, 1241
AclI AACGTT 1 cut(s) 225
AclWI GGATC 1 cut(s) 720
AcsI RAATTY 4 cut(s) 483, 503, 1042, 1138
AfaI GTAC 8 cut(s) 67, 189, 319, 533, 692, 765, 797, 1260
AfiI CCNNNNNNNGG 1 cut(s) 894
AgeI ACCGGT 1 cut(s) 1214
AgsI TTSAA 6 cut(s) 170, 230, 723, 803, 1048, 1163
AhlI ACTAGT 1 cut(s) 760
AluBI AGCT 3 cut(s) 259, 608, 862
AluI AGCT 3 cut(s) 259, 608, 862
Alw21I GWGCWC 3 cut(s) 610, 668, 864
Alw26I GTCTC 3 cut(s) 282, 470, 1207
Alw44I GTGCAC 1 cut(s) 664
AlwI GGATC 1 cut(s) 720
AoxI GGCC 1 cut(s) 12
ApaLI GTGCAC 1 cut(s) 664
ApeKI GCWGC 1 cut(s) 1082
ApoI RAATTY 4 cut(s) 483, 503, 1042, 1138
AseI ATTAAT 1 cut(s) 408
AsiGI ACCGGT 1 cut(s) 1214
Asp700I GAANNNNTTC 1 cut(s) 523
AspS9I GGNCC 3 cut(s) 12, 787, 1217
AsuC2I CCSGG 1 cut(s) 653
AsuHPI GGTGA 2 cut(s) 224, 745
AvaII GGWCC 2 cut(s) 787, 1217
BaeGI GKGCMC 1 cut(s) 668
BanII GRGCYC 2 cut(s) 610, 864
Bbv12I GWGCWC 3 cut(s) 610, 668, 864
BbvI GCAGC 1 cut(s) 1094
BccI CCATC 6 cut(s) 44, 334, 338, 677, 983, 1223
BclI TGATCA 2 cut(s) 214, 1123
BcnI CCSGG 1 cut(s) 653
BcoDI GTCTC 3 cut(s) 282, 470, 1207
BcuI ACTAGT 1 cut(s) 760
BfaI CTAG 4 cut(s) 252, 260, 761, 917
BisI GCNGC 3 cut(s) 73, 630, 1083
BlpI GCTNAGC 1 cut(s) 858
BlsI GCNGC 3 cut(s) 74, 631, 1084
BmcAI AGTACT 3 cut(s) 67, 189, 797
Bme1390I CCNGG 1 cut(s) 653
Bme18I GGWCC 2 cut(s) 787, 1217
BmgT120I GGNCC 3 cut(s) 12, 787, 1217
BmiI GGNNCC 2 cut(s) 13, 789
BmrFI CCNGG 1 cut(s) 653
BmsI GCATC 3 cut(s) 961, 1025, 1108
BpmI CTGGAG 2 cut(s) 212, 624
Bpu1102I GCTNAGC 1 cut(s) 858
BpuEI CTTGAG 1 cut(s) 960
BpuMI CCSGG 1 cut(s) 653
BsaBI GATNNNNATC 1 cut(s) 1122
BsaJI CCNNGG 1 cut(s) 270
BsaWI WCCGGW 2 cut(s) 869, 1214
BsaXI ACNNNNNCTCC 2 cut(s) 378, 408
Bsc4I CCNNNNNNNGG 1 cut(s) 894
Bse118I RCCGGY 1 cut(s) 1214
Bse1I ACTGG 3 cut(s) 73, 195, 881
Bse8I GATNNNNATC 1 cut(s) 1122
BseDI CCNNGG 1 cut(s) 270
BseGI GGATG 3 cut(s) 349, 688, 1261
BseJI GATNNNNATC 1 cut(s) 1122
BseLI CCNNNNNNNGG 1 cut(s) 894
BseMII CTCAG 2 cut(s) 542, 849
BseNI ACTGG 3 cut(s) 73, 195, 881
BseSI GKGCMC 1 cut(s) 668
BseXI GCAGC 1 cut(s) 1094
Bsh1236I CGCG 1 cut(s) 577
BshFI GGCC 1 cut(s) 14
BshTI ACCGGT 1 cut(s) 1214
BsiHKAI GWGCWC 3 cut(s) 610, 668, 864
BsiSI CCGG 3 cut(s) 652, 870, 1215
BslFI GGGAC 3 cut(s) 586, 668, 730
BslI CCNNNNNNNGG 1 cut(s) 894
BsmAI GTCTC 3 cut(s) 282, 470, 1207
BsmFI GGGAC 3 cut(s) 586, 668, 730
BsnI GGCC 1 cut(s) 14
Bsp1286I GDGCHC 3 cut(s) 610, 668, 864
Bsp1407I TGTACA 1 cut(s) 1258
Bsp143I GATC 3 cut(s) 214, 725, 1123
Bsp1720I GCTNAGC 1 cut(s) 858
BspACI CCGC 4 cut(s) 72, 629, 1085, 1241
BspANI GGCC 1 cut(s) 14
BspCNI CTCAG 2 cut(s) 541, 850
BspFNI CGCG 1 cut(s) 577
BspHI TCATGA 1 cut(s) 538
BspLI GGNNCC 2 cut(s) 13, 789
BspPI GGATC 1 cut(s) 720
BsrFI RCCGGY 1 cut(s) 1214
BsrGI TGTACA 1 cut(s) 1258
BsrI ACTGG 3 cut(s) 73, 195, 881
BssAI RCCGGY 1 cut(s) 1214
BssECI CCNNGG 1 cut(s) 270
BssMI GATC 3 cut(s) 214, 725, 1123
Bst4CI ACNGT 4 cut(s) 65, 322, 839, 1287
BstAPI GCANNNNNTGC 1 cut(s) 704
BstAUI TGTACA 1 cut(s) 1258
BstC8I GCNNGC 1 cut(s) 1111
BstDEI CTNAG 2 cut(s) 528, 858
BstDSI CCRYGG 1 cut(s) 270
BstF5I GGATG 3 cut(s) 349, 688, 1261
BstFNI CGCG 1 cut(s) 577
BstKTI GATC 3 cut(s) 217, 728, 1126
BstMAI GTCTC 3 cut(s) 282, 470, 1207
BstMBI GATC 3 cut(s) 214, 725, 1123
BstMWI GCNNNNNNNGC 2 cut(s) 704, 1025
BstSCI CCNGG 1 cut(s) 651
BstSLI GKGCMC 1 cut(s) 668
BstUI CGCG 1 cut(s) 577
BstV1I GCAGC 1 cut(s) 1094
BstX2I RGATCY 1 cut(s) 725
BstYI RGATCY 1 cut(s) 725
BsuRI GGCC 1 cut(s) 14
BtgI CCRYGG 1 cut(s) 270
BtgZI GCGATG 1 cut(s) 1209
BtsCI GGATG 3 cut(s) 349, 688, 1261
Cac8I GCNNGC 1 cut(s) 1111
CciI TCATGA 1 cut(s) 538
Cfr10I RCCGGY 1 cut(s) 1214
Cfr13I GGNCC 3 cut(s) 12, 787, 1217
CseI GACGC 1 cut(s) 583
Csp6I GTAC 8 cut(s) 66, 188, 318, 532, 691, 764, 796, 1259
CspAI ACCGGT 1 cut(s) 1214
CviAII CATG 7 cut(s) 108, 539, 567, 767, 889, 940, 1127
CviQI GTAC 8 cut(s) 66, 188, 318, 532, 691, 764, 796, 1259
DdeI CTNAG 2 cut(s) 528, 858
DpnI GATC 3 cut(s) 216, 727, 1125
DpnII GATC 3 cut(s) 214, 725, 1123
Ecl136II GAGCTC 2 cut(s) 608, 862
Eco24I GRGCYC 2 cut(s) 610, 864
Eco47I GGWCC 2 cut(s) 787, 1217
Eco53kI GAGCTC 2 cut(s) 608, 862
EcoICRI GAGCTC 2 cut(s) 608, 862
EcoO109I RGGNCCY 1 cut(s) 12
EcoT22I ATGCAT 1 cut(s) 941
EcoT38I GRGCYC 2 cut(s) 610, 864
FaeI CATG 7 cut(s) 111, 542, 570, 770, 892, 943, 1130
FaqI GGGAC 3 cut(s) 586, 668, 730
FatI CATG 7 cut(s) 107, 538, 566, 766, 888, 939, 1126
FbaI TGATCA 2 cut(s) 214, 1123
FblI GTMKAC 1 cut(s) 590
Fnu4HI GCNGC 3 cut(s) 73, 630, 1083
FokI GGATG 3 cut(s) 356, 695, 1268
FriOI GRGCYC 2 cut(s) 610, 864
Fsp4HI GCNGC 3 cut(s) 73, 630, 1083
FspBI CTAG 4 cut(s) 252, 260, 761, 917
GluI GCNGC 3 cut(s) 73, 630, 1083
GsuI CTGGAG 2 cut(s) 212, 624
HaeIII GGCC 1 cut(s) 14
HapII CCGG 3 cut(s) 652, 870, 1215
HgaI GACGC 1 cut(s) 583
Hin1II CATG 7 cut(s) 111, 542, 570, 770, 892, 943, 1130
HincII GTYRAC 3 cut(s) 382, 436, 1212
HindII GTYRAC 3 cut(s) 382, 436, 1212
HinfI GANTC 3 cut(s) 421, 949, 1244
HpaI GTTAAC 2 cut(s) 382, 436
HpaII CCGG 3 cut(s) 652, 870, 1215
HphI GGTGA 2 cut(s) 224, 745
Hpy166II GTNNAC 9 cut(s) 325, 382, 436, 499, 591, 646, 666, 835, 1212
Hpy188I TCNGA 1 cut(s) 38
Hpy188III TCNNGA 6 cut(s) 511, 539, 723, 865, 968, 1169
Hpy8I GTNNAC 9 cut(s) 325, 382, 436, 499, 591, 646, 666, 835, 1212
HpyAV CCTTC 2 cut(s) 941, 1047
HpyCH4III ACNGT 4 cut(s) 65, 322, 839, 1287
HpyCH4IV ACGT 2 cut(s) 225, 1060
HpyCH4V TGCA 5 cut(s) 107, 666, 707, 939, 1028
HpyF10VI GCNNNNNNNGC 2 cut(s) 704, 1025
HpyF3I CTNAG 2 cut(s) 528, 858
HpySE526I ACGT 2 cut(s) 225, 1060
Hsp92II CATG 7 cut(s) 111, 542, 570, 770, 892, 943, 1130
Ksp22I TGATCA 2 cut(s) 214, 1123
KspAI GTTAAC 2 cut(s) 382, 436
Kzo9I GATC 3 cut(s) 214, 725, 1123
LmnI GCTCC 4 cut(s) 193, 256, 605, 943
Lsp1109I GCAGC 1 cut(s) 1094
LweI GCATC 3 cut(s) 961, 1025, 1108
MaeI CTAG 4 cut(s) 252, 260, 761, 917
MaeII ACGT 2 cut(s) 225, 1060
MaeIII GTNAC 1 cut(s) 992
MalI GATC 3 cut(s) 216, 727, 1125
MboI GATC 3 cut(s) 214, 725, 1123
MboII GAAGA 3 cut(s) 198, 1013, 1239
MflI RGATCY 1 cut(s) 725
MhlI GDGCHC 3 cut(s) 610, 668, 864
MmeI TCCRAC 1 cut(s) 96
Mph1103I ATGCAT 1 cut(s) 941
MroXI GAANNNNTTC 1 cut(s) 523
MseI TTAA 7 cut(s) 237, 246, 381, 408, 435, 453, 1040
MslI CAYNNNNRTG 2 cut(s) 444, 1033
MspA1I CMGCKG 2 cut(s) 1085, 1241
MspI CCGG 3 cut(s) 652, 870, 1215
MspR9I CCNGG 1 cut(s) 653
MvnI CGCG 1 cut(s) 577
MwoI GCNNNNNNNGC 2 cut(s) 704, 1025
NciI CCSGG 1 cut(s) 653
NdeII GATC 3 cut(s) 214, 725, 1123
NlaIII CATG 7 cut(s) 111, 542, 570, 770, 892, 943, 1130
NlaIV GGNNCC 2 cut(s) 13, 789
NsiI ATGCAT 1 cut(s) 941
PagI TCATGA 1 cut(s) 538
PdmI GAANNNNTTC 1 cut(s) 523
PfeI GAWTC 3 cut(s) 421, 949, 1244
PflFI GACNNNGTC 1 cut(s) 122
PinAI ACCGGT 1 cut(s) 1214
PkrI GCNGC 3 cut(s) 74, 631, 1084
PshBI ATTAAT 1 cut(s) 408
Psp124BI GAGCTC 2 cut(s) 610, 864
Psp1406I AACGTT 1 cut(s) 225
PspN4I GGNNCC 2 cut(s) 13, 789
PspPI GGNCC 3 cut(s) 12, 787, 1217
PsuI RGATCY 1 cut(s) 725
PsyI GACNNNGTC 1 cut(s) 122
RsaI GTAC 8 cut(s) 67, 189, 319, 533, 692, 765, 797, 1260
RsaNI GTAC 8 cut(s) 66, 188, 318, 532, 691, 764, 796, 1259
RseI CAYNNNNRTG 2 cut(s) 444, 1033
SacI GAGCTC 2 cut(s) 610, 864
SaqAI TTAA 7 cut(s) 237, 246, 381, 408, 435, 453, 1040
SatI GCNGC 3 cut(s) 73, 630, 1083
Sau3AI GATC 3 cut(s) 214, 725, 1123
Sau96I GGNCC 3 cut(s) 12, 787, 1217
ScaI AGTACT 3 cut(s) 67, 189, 797
ScrFI CCNGG 1 cut(s) 653
SduI GDGCHC 3 cut(s) 610, 668, 864
SfaNI GCATC 3 cut(s) 961, 1025, 1108
SinI GGWCC 2 cut(s) 787, 1217
SmiMI CAYNNNNRTG 2 cut(s) 444, 1033
SmlI CTYRAG 1 cut(s) 975
SmoI CTYRAG 1 cut(s) 975
SpeI ACTAGT 1 cut(s) 760
SsiI CCGC 4 cut(s) 72, 629, 1085, 1241
SspMI CTAG 4 cut(s) 252, 260, 761, 917
SstI GAGCTC 2 cut(s) 610, 864
StyD4I CCNGG 1 cut(s) 651
TaaI ACNGT 4 cut(s) 65, 322, 839, 1287
TaiI ACGT 2 cut(s) 228, 1063
TaqI TCGA 3 cut(s) 899, 960, 1102
TatI WGTACW 7 cut(s) 65, 187, 531, 690, 763, 795, 1258
TauI GCSGC 2 cut(s) 75, 632
TfiI GAWTC 3 cut(s) 421, 949, 1244
Tru1I TTAA 7 cut(s) 237, 246, 381, 408, 435, 453, 1040
Tru9I TTAA 7 cut(s) 237, 246, 381, 408, 435, 453, 1040
TseI GCWGC 1 cut(s) 1082
TspDTI ATGAA 7 cut(s) 394, 426, 527, 998, 1085, 1121, 1239
TspGWI ACGGA 4 cut(s) 287, 399, 531, 1196
Tth111I GACNNNGTC 1 cut(s) 122
VneI GTGCAC 1 cut(s) 664
VpaK11BI GGWCC 2 cut(s) 787, 1217
VspI ATTAAT 1 cut(s) 408
XapI RAATTY 4 cut(s) 483, 503, 1042, 1138
XmiI GTMKAC 1 cut(s) 590
XmnI GAANNNNTTC 1 cut(s) 523
XspI CTAG 4 cut(s) 252, 260, 761, 917
ZrmI AGTACT 3 cut(s) 67, 189, 797
Zsp2I ATGCAT 1 cut(s) 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.