Rh2DG357100

wall-associated receptor kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000052
Physical Location & Seq
Forward (+)
50257833 .. 50263484
5652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG357100.1

Sequence Viewer

Length: 2226 bp
ATGTCGAGATCCCAGTTCCAGTTTCTTGTGCTGCACTTTACTAGCTTGTTCATCTTGTGGTCTATTAGCAGCAGTCCAACACTAGCGGCCTTATGGCATGGGCTTCCCGCAGACTCGATAGCAAAGGATCATTGCCCGTCCCATTGTGGAGGCATTGAAATCCCATATCCTTTTGGAATTGGAGAAGGCTGTTACCTTATTGGCGCCGAACTAGATTACTACAACAAATCGTTCCAGATAATCTGTGACCACTCAACCAGCCCTCCCAAACCTTTCTTGACCAACACAAGTCTCGAGGTGCTGGAAATCTCTATTGAAGGCACAGTGCTGGTCAGAAGCCCCATCACCTTCTCAAATTGCATTGGCAAGATGAGCAACCGCCAGACCCCCAATCTGAGGGATACCCCTTTCTGGTACTCCCAGAAGAACAGGTTCACTTCAATGAGTTGTGGAGGAATTGCCCTAATGACCGAGCTTTATAATGGGTCGACAACAACACTTGGTGGCTGCTTGTCCATTTGTGACTACTCCAGAAGTAGCATATTGCAGAATAATAGCTGCGGTGGTATCAACTGCTGCCAGACCACCCTTCCTCAATATTTAGACAACTTCAATGCTAGTTTTGGAGAAGTAATAAACGCTCGCAGTGCTGAGGAATGCAAGTATGTATTCCTTGTAGACCAAAGTTGGTTTACTACAACAAATATATCGGCCATTGGTGATATGGACTTCGTCCCTGTGGAGCTGGAATGGAACTTAATAAGCTATTCGAATATCGAGATATATGGGACGAACAATTGGACTGACAATAACAATAGCACATATAGCAGCGCTGATGGAAGTCTACGCTTCTGCTCAGAAGGCTATCAAGGAAACCCTTATCTTCTTCATGGATGTCAAGATATCGATGAATGTAAGGATCGTCGACTATGTGGTAGTTACGGGTTCTGTATCAATTATCCTGGAGACTTTGAGTGTGTGTTTCCTGATCCTCCACCGGTAAGGCCGGTAAAGCTGGGCGTTATAGTTACAAGCAGTGTTTTTGGAGTTCTATTTATACTCATTTGTGGATGGTGGTCACACAAAGTCATAAAAAAGCGGAAGAACATCAAACGCAAGAAGAAGTTCTTCAAGCAAAATGGTGGCTTGTTGTTACAGCAACAATTATCTTCAGGTGAAGTCAATGTTGAGAAAATTAAGCTGTTTAAATCTAAGGAGCTAGAGAAAGCCACAGACCATTTTAATGTAGACAGGATTCTTGGTCAAGGAGGCCAAGGTACTGTTTACAAAGGAATGCTGGCAGATGGAAGAATTGTTGCTGTGAAGAAGTCTAAACTAGTTCATGGTGGAGAAGTTAGACAATTCATCAATGAAATTGTCATTCTTTCCCAAATTATCCACAGAAATGTGGTCAAACTTTTGGGTTGTTGCTTAGAGACAGAAGTTCCCCTTTTGGTTTATGAATTCATCGCCAATGGAACACTTTCTGAATATATTCATCAGCAGAATGAAGAGTTTCCTCTTACATGGGAAATAAGACTACGAGTTGCCATCGAAGTAGCAGGAGCTCTTTCCTACTTACATTATGAAGCTGCTTTTCCCATTTACCATCGAGATATCAAGTCATCTAACATACTCCTAGATGAGAAATACAGAGCAAAAGTAGCAGACTTTGGGACTTCTCGATCCGTTGCGATTGACCAAACACACCTTACCACACTAGTACATGGAACATTTGGATATTTGGACCCAGAGTACTTCCAATCTAGCCAATTTACAGACAAGAGTGATGTTTATAGCTTTGGTGTGGTACTTGTTGAGCTCTTAACTGGACAAAAACCAGTTTCTTTACAAAGGTCCCAAGAAGGAAGAAGCCTAGCAACATATTTTCTCCTATCTATGGACCAAAATTGCCTGATTGATGTTCTAGATCCTCAAGTTACGAAATATGCTGGGAAGGAAGAGATTACTGCAGTCGCTAACCTTGCAAAAAGATGCCTAAATTTGAATGGAAAGAAACGACCTACTATGAAAGAAGTAGTATTTGAGTTGGAGGCAATTCAATTGTCAGTTAAGGCCTCTAATCATGTTCATCAAAATTTGGCAGAGGTTGCATATATCCAAACTCATGAAATAACCCAGGCTTGGGATATTGTTTCTACATCAACGGGGCCTTGTAACGATGGTGGTAGTTCTTCATTTGATGCACAACCATTGTTGACTTAG

Protein Analysis

741

Amino Acids

82.74

Weight (kDa)

6.01

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 45 - 107 3.1e-09 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 414 - 681 8e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 416 - 683 6.8e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 480
AccB1I GGYRCC 1 cut(s) 203
AccI GTMKAC 5 cut(s) 488, 678, 844, 925, 1248
AciI CCGC 5 cut(s) 86, 108, 379, 561, 1099
AclWI GGATC 6 cut(s) 3, 135, 927, 983, 1680, 1925
AcoI YGGCCR 1 cut(s) 711
AcsI RAATTY 3 cut(s) 1463, 2002, 2098
AcuI CTGAAG 1 cut(s) 1155
AcyI GRCGYC 1 cut(s) 204
AdeI CACNNNGTG 1 cut(s) 503
AfaI GTAC 5 cut(s) 416, 1279, 1725, 1757, 1812
AfeI AGCGCT 1 cut(s) 832
AfiI CCNNNNNNNGG 5 cut(s) 396, 411, 1900, 2145, 2146
AgeI ACCGGT 1 cut(s) 997
AgsI TTSAA 7 cut(s) 158, 317, 441, 613, 1132, 2008, 2063
AhlI ACTAGT 2 cut(s) 1336, 1720
AjnI CCWGG 2 cut(s) 961, 2139
Alw21I GWGCWC 2 cut(s) 1570, 1824
Alw26I GTCTC 3 cut(s) 296, 960, 1430
AlwI GGATC 6 cut(s) 3, 135, 927, 983, 1680, 1925
Ama87I CYCGRG 1 cut(s) 293
Aor51HI AGCGCT 1 cut(s) 832
AoxI GGCC 6 cut(s) 87, 711, 1004, 1270, 2076, 2171
ApeKI GCWGC 7 cut(s) 31, 69, 507, 558, 576, 828, 1592
ApoI RAATTY 3 cut(s) 1463, 2002, 2098
AsiGI ACCGGT 1 cut(s) 997
Asp700I GAANNNNTTC 6 cut(s) 431, 1124, 1127, 1483, 1494, 1515
AspLEI GCGC 2 cut(s) 206, 833
AspS9I GGNCC 4 cut(s) 1747, 1857, 1903, 2171
AsuHPI GGTGA 3 cut(s) 337, 731, 1187
AsuII TTCGAA 1 cut(s) 770
AvaI CYCGRG 1 cut(s) 293
AvaII GGWCC 3 cut(s) 1747, 1857, 1903
BanI GGYRCC 1 cut(s) 203
BanII GRGCYC 2 cut(s) 1570, 1824
Bbv12I GWGCWC 2 cut(s) 1570, 1824
BbvCI CCTCAGC 1 cut(s) 651
BbvI GCAGC 7 cut(s) 18, 81, 494, 545, 563, 840, 1579
BccI CCATC 7 cut(s) 350, 830, 1065, 1298, 1559, 1617, 2177
BciT130I CCWGG 2 cut(s) 963, 2141
BciVI GTATCC 1 cut(s) 394
BcoDI GTCTC 3 cut(s) 296, 960, 1430
BcuI ACTAGT 2 cut(s) 1336, 1720
BfmI CTRYAG 1 cut(s) 1971
BfoI RGCGCY 2 cut(s) 207, 834
BfuI GTATCC 1 cut(s) 394
BisI GCNGC 8 cut(s) 32, 70, 87, 508, 559, 577, 829, 1593
BlsI GCNGC 8 cut(s) 33, 71, 88, 509, 560, 578, 830, 1594
BmcAI AGTACT 1 cut(s) 1757
Bme1390I CCNGG 2 cut(s) 963, 2141
Bme18I GGWCC 3 cut(s) 1747, 1857, 1903
BmeT110I CYCGRG 1 cut(s) 293
BmgT120I GGNCC 4 cut(s) 1747, 1857, 1903, 2171
BmiI GGNNCC 4 cut(s) 205, 1749, 1859, 2172
BmrFI CCNGG 2 cut(s) 963, 2141
BmrI ACTGGG 1 cut(s) 7
BmsI GCATC 2 cut(s) 1985, 2194
BmuI ACTGGG 1 cut(s) 7
BpmI CTGGAG 2 cut(s) 514, 984
Bpu10I CCTNAGC 1 cut(s) 651
Bpu14I TTCGAA 1 cut(s) 770
BpuEI CTTGAG 1 cut(s) 1920
Bsa29I ATCGAT 1 cut(s) 906
BsaHI GRCGYC 1 cut(s) 204
BsaJI CCNNGG 2 cut(s) 1273, 2139
BsaWI WCCGGW 1 cut(s) 997
BsaXI ACNNNNNCTCC 2 cut(s) 247, 277
Bsc4I CCNNNNNNNGG 5 cut(s) 396, 411, 1900, 2145, 2146
Bse118I RCCGGY 2 cut(s) 997, 1006
Bse1I ACTGG 4 cut(s) 13, 19, 1834, 1841
Bse3DI GCAATG 1 cut(s) 130
BseBI CCWGG 2 cut(s) 963, 2141
BseCI ATCGAT 1 cut(s) 906
BseDI CCNNGG 2 cut(s) 1273, 2139
BseGI GGATG 2 cut(s) 899, 1076
BseLI CCNNNNNNNGG 5 cut(s) 396, 411, 1900, 2145, 2146
BseMI GCAATG 1 cut(s) 130
BseMII CTCAG 3 cut(s) 386, 642, 870
BseNI ACTGG 4 cut(s) 13, 19, 1834, 1841
BseXI GCAGC 7 cut(s) 18, 81, 494, 545, 563, 840, 1579
BseYI CCCAGC 2 cut(s) 1015, 1952
BsgI GTGCAG 1 cut(s) 17
BshFI GGCC 6 cut(s) 89, 713, 1006, 1272, 2078, 2173
BshNI GGYRCC 1 cut(s) 203
BshTI ACCGGT 1 cut(s) 997
BshVI ATCGAT 1 cut(s) 906
BsiHKAI GWGCWC 2 cut(s) 1570, 1824
BsiHKCI CYCGRG 1 cut(s) 293
BsiSI CCGG 2 cut(s) 998, 1007
BslFI GGGAC 5 cut(s) 124, 719, 802, 1690, 1843
BslI CCNNNNNNNGG 5 cut(s) 396, 411, 1900, 2145, 2146
BsmAI GTCTC 3 cut(s) 296, 960, 1430
BsmFI GGGAC 5 cut(s) 124, 719, 802, 1690, 1843
BsmI GAATGC 2 cut(s) 662, 1299
BsnI GGCC 6 cut(s) 89, 713, 1006, 1272, 2078, 2173
BsoBI CYCGRG 1 cut(s) 293
Bsp119I TTCGAA 1 cut(s) 770
Bsp1286I GDGCHC 2 cut(s) 1570, 1824
Bsp143I GATC 6 cut(s) 8, 127, 919, 988, 1685, 1930
BspACI CCGC 5 cut(s) 86, 108, 379, 561, 1099
BspANI GGCC 6 cut(s) 89, 713, 1006, 1272, 2078, 2173
BspCNI CTCAG 3 cut(s) 387, 643, 869
BspDI ATCGAT 1 cut(s) 906
BspHI TCATGA 1 cut(s) 2128
BspLI GGNNCC 4 cut(s) 205, 1749, 1859, 2172
BspMAI CTGCAG 1 cut(s) 1975
BspPI GGATC 6 cut(s) 3, 135, 927, 983, 1680, 1925
BspT104I TTCGAA 1 cut(s) 770
BspT107I GGYRCC 1 cut(s) 203
BsrDI GCAATG 1 cut(s) 130
BsrFI RCCGGY 2 cut(s) 997, 1006
BsrI ACTGG 4 cut(s) 13, 19, 1834, 1841
BssAI RCCGGY 2 cut(s) 997, 1006
BssECI CCNNGG 2 cut(s) 1273, 2139
BssMI GATC 6 cut(s) 8, 127, 919, 988, 1685, 1930
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 1 cut(s) 1273
Bst2UI CCWGG 2 cut(s) 963, 2141
Bst4CI ACNGT 2 cut(s) 325, 1282
Bst6I CTCTTC 2 cut(s) 1506, 1956
BstACI GRCGYC 1 cut(s) 204
BstAPI GCANNNNNTGC 1 cut(s) 2111
BstBI TTCGAA 1 cut(s) 770
BstC8I GCNNGC 2 cut(s) 643, 1299
BstDEI CTNAG 6 cut(s) 395, 651, 856, 1212, 1432, 2223
BstF5I GGATG 2 cut(s) 899, 1076
BstH2I RGCGCY 2 cut(s) 207, 834
BstHHI GCGC 2 cut(s) 206, 833
BstKTI GATC 6 cut(s) 11, 130, 922, 991, 1688, 1933
BstMAI GTCTC 3 cut(s) 296, 960, 1430
BstMBI GATC 6 cut(s) 8, 127, 919, 988, 1685, 1930
BstMWI GCNNNNNNNGC 8 cut(s) 372, 647, 825, 861, 1012, 1664, 1985, 2111
BstNI CCWGG 2 cut(s) 963, 2141
BstSCI CCNGG 2 cut(s) 961, 2139
BstSFI CTRYAG 1 cut(s) 1971
BstV1I GCAGC 7 cut(s) 18, 81, 494, 545, 563, 840, 1579
BstX2I RGATCY 2 cut(s) 8, 1930
BstYI RGATCY 2 cut(s) 8, 1930
Bsu15I ATCGAT 1 cut(s) 906
BsuI GTATCC 1 cut(s) 394
BsuRI GGCC 6 cut(s) 89, 713, 1006, 1272, 2078, 2173
BsuTUI ATCGAT 1 cut(s) 906
BtgZI GCGATG 1 cut(s) 1453
BtsCI GGATG 2 cut(s) 899, 1076
BtsI GCAGTG 2 cut(s) 652, 1042
BtsIMutI CAGTG 3 cut(s) 330, 652, 1042
Cac8I GCNNGC 2 cut(s) 643, 1299
CciI TCATGA 1 cut(s) 2128
CfoI GCGC 2 cut(s) 206, 833
Cfr10I RCCGGY 2 cut(s) 997, 1006
Cfr13I GGNCC 4 cut(s) 1747, 1857, 1903, 2171
ClaI ATCGAT 1 cut(s) 906
Csp6I GTAC 5 cut(s) 415, 1278, 1724, 1756, 1811
CspAI ACCGGT 1 cut(s) 997
CviAII CATG 7 cut(s) 98, 890, 1343, 1527, 1727, 2087, 2129
CviQI GTAC 5 cut(s) 415, 1278, 1724, 1756, 1811
DdeI CTNAG 6 cut(s) 395, 651, 856, 1212, 1432, 2223
DinI GGCGCC 1 cut(s) 205
DpnI GATC 6 cut(s) 10, 129, 921, 990, 1687, 1932
DpnII GATC 6 cut(s) 8, 127, 919, 988, 1685, 1930
DraI TTTAAA 1 cut(s) 1207
DraIII CACNNNGTG 1 cut(s) 503
EaeI YGGCCR 1 cut(s) 711
Eam1104I CTCTTC 2 cut(s) 1506, 1956
EarI CTCTTC 2 cut(s) 1506, 1956
Ecl136II GAGCTC 2 cut(s) 1568, 1822
Eco130I CCWWGG 1 cut(s) 1273
Eco147I AGGCCT 1 cut(s) 2078
Eco24I GRGCYC 2 cut(s) 1570, 1824
Eco32I GATATC 2 cut(s) 904, 1618
Eco47I GGWCC 3 cut(s) 1747, 1857, 1903
Eco47III AGCGCT 1 cut(s) 832
Eco53kI GAGCTC 2 cut(s) 1568, 1822
Eco57I CTGAAG 1 cut(s) 1155
Eco88I CYCGRG 1 cut(s) 293
EcoICRI GAGCTC 2 cut(s) 1568, 1822
EcoO109I RGGNCCY 2 cut(s) 1857, 2171
EcoRI GAATTC 1 cut(s) 1463
EcoRII CCWGG 2 cut(s) 961, 2139
EcoRV GATATC 2 cut(s) 904, 1618
EcoT14I CCWWGG 1 cut(s) 1273
EcoT38I GRGCYC 2 cut(s) 1570, 1824
EgeI GGCGCC 1 cut(s) 205
EheI GGCGCC 1 cut(s) 205
ErhI CCWWGG 1 cut(s) 1273
FaeI CATG 7 cut(s) 101, 893, 1346, 1530, 1730, 2090, 2132
FalI AAGNNNNNCTT 4 cut(s) 1112, 1144, 1434, 1466
FaqI GGGAC 5 cut(s) 124, 719, 802, 1690, 1843
FatI CATG 7 cut(s) 97, 889, 1342, 1526, 1726, 2086, 2128
FauI CCCGC 1 cut(s) 115
FblI GTMKAC 5 cut(s) 488, 678, 844, 925, 1248
Fnu4HI GCNGC 8 cut(s) 32, 70, 87, 508, 559, 577, 829, 1593
FokI GGATG 2 cut(s) 906, 1083
FriOI GRGCYC 2 cut(s) 1570, 1824
Fsp4HI GCNGC 8 cut(s) 32, 70, 87, 508, 559, 577, 829, 1593
GlaI GCGC 2 cut(s) 205, 832
GluI GCNGC 8 cut(s) 32, 70, 87, 508, 559, 577, 829, 1593
GsaI CCCAGC 2 cut(s) 1019, 1956
GsuI CTGGAG 2 cut(s) 514, 984
HaeII RGCGCY 2 cut(s) 207, 834
HaeIII GGCC 6 cut(s) 89, 713, 1006, 1272, 2078, 2173
HapII CCGG 2 cut(s) 998, 1007
HhaI GCGC 2 cut(s) 206, 833
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 7 cut(s) 101, 893, 1346, 1530, 1730, 2090, 2132
Hin6I GCGC 2 cut(s) 204, 831
HinP1I GCGC 2 cut(s) 204, 831
HincII GTYRAC 3 cut(s) 489, 926, 2220
HindII GTYRAC 3 cut(s) 489, 926, 2220
HinfI GANTC 2 cut(s) 113, 1255
HpaII CCGG 2 cut(s) 998, 1007
HphI GGTGA 3 cut(s) 337, 731, 1187
Hpy166II GTNNAC 9 cut(s) 435, 489, 679, 693, 845, 926, 1249, 1285, 2220
Hpy188I TCNGA 4 cut(s) 335, 396, 859, 1489
Hpy8I GTNNAC 9 cut(s) 435, 489, 679, 693, 845, 926, 1249, 1285, 2220
Hpy99I CGWCG 1 cut(s) 927
HpyAV CCTTC 7 cut(s) 179, 311, 358, 599, 854, 1859, 1951
HpyCH4III ACNGT 2 cut(s) 325, 1282
HpyCH4V TGCA 8 cut(s) 34, 360, 547, 660, 1973, 1988, 2114, 2207
HpyF10VI GCNNNNNNNGC 8 cut(s) 372, 647, 825, 861, 1012, 1664, 1985, 2111
HpyF3I CTNAG 6 cut(s) 395, 651, 856, 1212, 1432, 2223
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 7 cut(s) 101, 893, 1346, 1530, 1730, 2090, 2132
HspAI GCGC 2 cut(s) 204, 831
KasI GGCGCC 1 cut(s) 203
Kzo9I GATC 6 cut(s) 8, 127, 919, 988, 1685, 1930
LmnI GCTCC 3 cut(s) 742, 1216, 1565
Lsp1109I GCAGC 7 cut(s) 18, 81, 494, 545, 563, 840, 1579
LweI GCATC 2 cut(s) 1985, 2194
MaeIII GTNAC 9 cut(s) 191, 245, 521, 938, 1027, 1077, 1152, 1939, 2177
MalI GATC 6 cut(s) 10, 129, 921, 990, 1687, 1932
MboI GATC 6 cut(s) 8, 127, 919, 988, 1685, 1930
MfeI CAATTG 2 cut(s) 796, 2063
MflI RGATCY 2 cut(s) 8, 1930
MhlI GDGCHC 2 cut(s) 1570, 1824
Mly113I GGCGCC 1 cut(s) 204
MlyI GAGTC 1 cut(s) 107
MmeI TCCRAC 2 cut(s) 101, 2031
MroXI GAANNNNTTC 6 cut(s) 431, 1124, 1127, 1483, 1494, 1515
MseI TTAA 6 cut(s) 758, 1197, 1206, 1242, 1826, 2073
MslI CAYNNNNRTG 3 cut(s) 440, 1242, 1404
MspI CCGG 2 cut(s) 998, 1007
MspR9I CCNGG 2 cut(s) 963, 2141
MunI CAATTG 2 cut(s) 796, 2063
Mva1269I GAATGC 2 cut(s) 662, 1299
MvaI CCWGG 2 cut(s) 963, 2141
MwoI GCNNNNNNNGC 8 cut(s) 372, 647, 825, 861, 1012, 1664, 1985, 2111
NarI GGCGCC 1 cut(s) 204
NdeII GATC 6 cut(s) 8, 127, 919, 988, 1685, 1930
NlaIII CATG 7 cut(s) 101, 893, 1346, 1530, 1730, 2090, 2132
NlaIV GGNNCC 4 cut(s) 205, 1749, 1859, 2172
NmuCI GTSAC 3 cut(s) 245, 521, 1077
NspV TTCGAA 1 cut(s) 770
PaeR7I CTCGAG 1 cut(s) 293
PagI TCATGA 1 cut(s) 2128
PceI AGGCCT 1 cut(s) 2078
PctI GAATGC 2 cut(s) 662, 1299
PdmI GAANNNNTTC 6 cut(s) 431, 1124, 1127, 1483, 1494, 1515
PfeI GAWTC 1 cut(s) 1255
PflFI GACNNNGTC 1 cut(s) 731
PfoI TCCNGGA 1 cut(s) 961
PinAI ACCGGT 1 cut(s) 997
PkrI GCNGC 8 cut(s) 33, 71, 88, 509, 560, 578, 830, 1594
PleI GAGTC 1 cut(s) 107
PluTI GGCGCC 1 cut(s) 207
PpsI GAGTC 1 cut(s) 107
PpuMI RGGWCCY 1 cut(s) 1857
PsiI TTATAA 1 cut(s) 480
Psp124BI GAGCTC 2 cut(s) 1570, 1824
Psp5II RGGWCCY 1 cut(s) 1857
Psp6I CCWGG 2 cut(s) 961, 2139
PspFI CCCAGC 2 cut(s) 1015, 1952
PspGI CCWGG 2 cut(s) 961, 2139
PspN4I GGNNCC 4 cut(s) 205, 1749, 1859, 2172
PspPI GGNCC 4 cut(s) 1747, 1857, 1903, 2171
PspPPI RGGWCCY 1 cut(s) 1857
PstI CTGCAG 1 cut(s) 1975
PsuI RGATCY 2 cut(s) 8, 1930
PsyI GACNNNGTC 1 cut(s) 731
RsaI GTAC 5 cut(s) 416, 1279, 1725, 1757, 1812
RsaNI GTAC 5 cut(s) 415, 1278, 1724, 1756, 1811
RseI CAYNNNNRTG 3 cut(s) 440, 1242, 1404
SacI GAGCTC 2 cut(s) 1570, 1824
SalI GTCGAC 2 cut(s) 487, 924
SaqAI TTAA 6 cut(s) 758, 1197, 1206, 1242, 1826, 2073
SatI GCNGC 8 cut(s) 32, 70, 87, 508, 559, 577, 829, 1593
Sau3AI GATC 6 cut(s) 8, 127, 919, 988, 1685, 1930
Sau96I GGNCC 4 cut(s) 1747, 1857, 1903, 2171
ScaI AGTACT 1 cut(s) 1757
SchI GAGTC 1 cut(s) 107
ScrFI CCNGG 2 cut(s) 963, 2141
SduI GDGCHC 2 cut(s) 1570, 1824
SfaNI GCATC 2 cut(s) 1985, 2194
SfcI CTRYAG 1 cut(s) 1971
SfoI GGCGCC 1 cut(s) 205
Sfr274I CTCGAG 1 cut(s) 293
SfuI TTCGAA 1 cut(s) 770
SinI GGWCC 3 cut(s) 1747, 1857, 1903
SlaI CTCGAG 1 cut(s) 293
SmiMI CAYNNNNRTG 3 cut(s) 440, 1242, 1404
SmlI CTYRAG 2 cut(s) 293, 1935
SmoI CTYRAG 2 cut(s) 293, 1935
SpeI ACTAGT 2 cut(s) 1336, 1720
SseBI AGGCCT 1 cut(s) 2078
SsiI CCGC 5 cut(s) 86, 108, 379, 561, 1099
SspDI GGCGCC 1 cut(s) 203
SspI AATATT 1 cut(s) 599
SstI GAGCTC 2 cut(s) 1570, 1824
StuI AGGCCT 1 cut(s) 2078
StyD4I CCNGG 2 cut(s) 961, 2139
StyI CCWWGG 1 cut(s) 1273
TaaI ACNGT 2 cut(s) 325, 1282
TaqII GACCGA 1 cut(s) 485
TatI WGTACW 2 cut(s) 1723, 1755
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 1 cut(s) 1255
Tru1I TTAA 6 cut(s) 758, 1197, 1206, 1242, 1826, 2073
Tru9I TTAA 6 cut(s) 758, 1197, 1206, 1242, 1826, 2073
TscAI CASTG 3 cut(s) 330, 652, 1042
TseFI GTSAC 3 cut(s) 245, 521, 1077
TseI GCWGC 7 cut(s) 31, 69, 507, 558, 576, 828, 1592
Tsp45I GTSAC 3 cut(s) 245, 521, 1077
TspGWI ACGGA 1 cut(s) 1678
TspRI CASTG 3 cut(s) 330, 652, 1042
Tth111I GACNNNGTC 1 cut(s) 731
VpaK11BI GGWCC 3 cut(s) 1747, 1857, 1903
XapI RAATTY 3 cut(s) 1463, 2002, 2098
XbaI TCTAGA 1 cut(s) 1927
XcmI CCANNNNNNNNNTGG 1 cut(s) 721
XhoI CTCGAG 1 cut(s) 293
XmiI GTMKAC 5 cut(s) 488, 678, 844, 925, 1248
XmnI GAANNNNTTC 6 cut(s) 431, 1124, 1127, 1483, 1494, 1515
ZrmI AGTACT 1 cut(s) 1757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.