Rw2G039520

wall-associated receptor kinase-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
64863537 .. 64870172
6636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G039520.1

Sequence Viewer

Length: 1488 bp
ATGCATGAAGACCTAAAACCAAACAATCGAGATATTGATATGCGATCAAAAAGTGAAACCTCTTTGACGCACAACAGATGCAACCTTTTTATTTCTCAAAGTATACAAATATTCGGACTAGGTCAAAATCTCAAGTACCATTATATCAATGAATGCGAGGATCCAAATCGCCCTAATATATGTGGTTCCGGCAATAATTGTTCCAATTATGATGGGTTCTTTTATTGCTACAAGCCACTGTCCCCACAACCTCGGCCATTTAAACTGGGCATTATAGTTCTCTGCAGTGTATTTGGACTGTTGTTTCATATCATTGCCGCATGGTGGTTGCACAAAGTCATAAAGAAAAGGACAAACATTAAGCGAAAGCAAAAGTTTTTTAGACTGAATGGTGGTTTGTTGTTGGAGCAACAGTTATCTTCTGGCGAAGTCAATGTTGAGAAGATTAAGTTGTTCAATGCAAAGGAGTTGGAGAAAGCCACAGACCGGTTTAATGTACACAGAATTCTTGGTGAAGGAGGCCAAGGTACTGTTTATAAAGGAATGTTGACAGATGGAAGAAATGTTGCTGTCAAGAAGTCAAAAGTAGTAGATGGAGGTGAAGTGAGTCAATTCATTAATGAGATTGTCATTCTTTCACAAATTAACCACAGGAATGTGGTTAAACTCTTGGGATGTTGTTTAGAGAGCGAAGTTCCCCTATTGGTCTATGAATTTTTACCCAACGGAACCCTTTCTCAATACATTCACAGCCGTGATGAGCATTTTCCTCTAACTTGGGAAATGCGATTACGAGTTGGTATGGAAGTTGCTGGAGCCCTTTCCTACTTACATTCATCTGCTTCAATGCCCATTTACCATCGAGACATCAAGTCTTCAAACATACTCTTGGATGATAAATATAGAGCAAAAGTTGCAGACTTTGGGACATCAAGAACTGTTTCCATTGACCAAACACATCTTTCCATGACACATGTAAACGGAACATTTGGTTATTTGGACCCTGAGTACTTCCAGTCTAGCCAATTTACAGACAAGAGCGACGTTTATAGCTTCGGAGTAGTCCTTGCCGAACTCTTGACTGGACAAAAACCAGTTTCTGTAACAAGATCGCAGGAAGGGAAACAAGATGGGAGAAGCCTAGCAACACATTTTATTGTGTCCATGGAGGAGAGTTGTTTGTTTGATATTCTTGATGCTGAAGTCGTGAAGGGAGGTAAGAAAGAAGAGATAGTGGCGGTTGCTAATCTTGCAAAACGTTGCTTGAATATGAAAGGAAAGAAGCGTCCAACTATGAAAGAAATAGCAGTTGAGTTGGAGGGAATTCTAATGTCAAGTAAATCTTCTGATGTCGAACACATTGCAGAGGTTGAACATGTCCAGACGGAAATAGCCGAGGTTTGGGATGTTTCTACATCAACAGGCTCTCATATGGACACCGGTTCTTCGTTAGATGGACAACCACTGCTGTCTTTCAAGTCTCGCTGA

Protein Analysis

495

Amino Acids

55.67

Weight (kDa)

7.62

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 164 - 435 5e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 166 - 438 6.6e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000052)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G16090 AT1G16110 AT1G16120 AT1G16130 AT1G16150 AT1G16160 AT1G16260 AT1G16260 AT1G16260 AT1G79670 AT1G79670
fragaria_vesca FvH4_1g22960 FvH4_3g09860 FvH4_3g10284 FvH4_3g10284 FvH4_3g10540 FvH4_3g24040 FvH4_3g35290 FvH4_3g35290 FvH4_5g06860 FvH4_5g06940 FvH4_6g15920 FvH4_6g15920 FvH4_6g37660 FvH4_6g37670 FvH4_6g37691 FvH4_6g37700 FvH4_6g37710 FvH4_6g38990 FvH4_6g39000 FvH4_6g39020 FvH4_6g39020 FvH4_6g39020 FvH4_6g39021 FvH4_6g39030 FvH4_6g39030 FvH4_6g39031 FvH4_6g39032 FvH4_6g45200 FvH4_6g45200
malus_domestica MD08G1107900.v1.1 MD09G1145100.v1.1 MD09G1145200.v1.1 MD09G1145300.v1.1 MD09G1145400.v1.1 MD09G1145500.v1.1 MD17G1131600.v1.1 MD17G1131700.v1.1 MD17G1131900.v1.1 MD17G1132000.v1.1
prunus_persica Prupe.1G188400_v2.0.a1 Prupe.1G188700_v2.0.a1 Prupe.3G180500_v2.0.a1 Prupe.3G180600_v2.0.a1 Prupe.3G180700_v2.0.a1 Prupe.3G181000_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181100_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181200_v2.0.a1 Prupe.3G181400_v2.0.a1 Prupe.3G181500_v2.0.a1 Prupe.3G181600_v2.0.a1 Prupe.3G181800_v2.0.a1 Prupe.3G181900_v2.0.a1 Prupe.3G182000_v2.0.a1 Prupe.3G182100_v2.0.a1 Prupe.3G182200_v2.0.a1 Prupe.3G182300_v2.0.a1 Prupe.3G182400_v2.0.a1 Prupe.3G182500_v2.0.a1 Prupe.3G182600_v2.0.a1 Prupe.3G182700_v2.0.a1 Prupe.5G051200_v2.0.a1 Prupe.5G051300_v2.0.a1 Prupe.5G051400_v2.0.a1 Prupe.5G051500_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051600_v2.0.a1 Prupe.5G051800_v2.0.a1
pyrus_communis pycom09g06470 pycom09g06490 pycom09g06510 pycom09g06520 pycom09g06570 pycom09g06580 pycom17g12440 pycom17g12450 pycom17g12530
rosa_chinensis RchiOBHm_Chr2g0117481 RchiOBHm_Chr2g0128321 RchiOBHm_Chr2g0128331 RchiOBHm_Chr2g0128581 RchiOBHm_Chr2g0128591 RchiOBHm_Chr2g0150651 RchiOBHm_Chr2g0150661 RchiOBHm_Chr2g0150741 RchiOBHm_Chr2g0150781 RchiOBHm_Chr2g0152581 RchiOBHm_Chr2g0152591 RchiOBHm_Chr2g0152641 RchiOBHm_Chr2g0152661 RchiOBHm_Chr2g0152711 RchiOBHm_Chr2g0152731 RchiOBHm_Chr2g0152871 RchiOBHm_Chr2g0152881 RchiOBHm_Chr2g0152901 RchiOBHm_Chr2g0152921 RchiOBHm_Chr2g0152931 RchiOBHm_Chr2g0152941 RchiOBHm_Chr3g0469621 RchiOBHm_Chr3g0469631 RchiOBHm_Chr5g0015591 RchiOBHm_Chr5g0046061 RchiOBHm_Chr5g0047341 RchiOBHm_Chr5g0063341 RchiOBHm_Chr5g0063351 RchiOBHm_Chr6g0264381 RchiOBHm_Chr7g0191741 RchiOBHm_Chr7g0210751 RchiOBHm_Chr7g0221871 RchiOBHm_Chr7g0225671 RchiOBHm_Chr7g0225891 RchiOBHm_Chr7g0225901 RchiOBHm_Chr7g0225961 RchiOBHm_Chr7g0225971 RchiOBHm_Chr7g0234031 RchiOBHm_Chr7g0234041
rosa_laevigata RLG00000001780 RLG00000001784 RLG00000001785 RLG00000001788 RLG00000001789 RLG00000001793 RLG00000001794 RLG00000002941 RLG00000004430 RLG00000014259 RLG00000018349 RLG00000019001 RLG00000019005 RLG00000019011 RLG00000020503 RLG00000020507 RLG00000020648 RLG00000020649 RLG00000020651 RLG00000020652 RLG00000020653 RLG00000020655 RLG00000020656 RLG00000020657 RLG00000023668 RLG00000024331 RLG00000034386 RLG00000035624 RLG00000035625
rosa_multiflora Rmu_co8401977.1_g000001 Rmu_co8409989.1_g000001 Rmu_co8432067.1_g000001 Rmu_co8491011.1_g000001 Rmu_sc0000580.1_g000085 Rmu_sc0000740.1_g000012 Rmu_sc0000740.1_g000014 Rmu_sc0000837.1_g000041 Rmu_sc0000837.1_g000077 Rmu_sc0001552.1_g000008 Rmu_sc0001617.1_g000001 Rmu_sc0002082.1_g000006 Rmu_sc0002082.1_g000007 Rmu_sc0002082.1_g000022 Rmu_sc0002989.1_g000013 Rmu_sc0003064.1_g000011 Rmu_sc0003127.1_g000003 Rmu_sc0003127.1_g000014 Rmu_sc0003127.1_g000028 Rmu_sc0003127.1_g000032 Rmu_sc0003127.1_g000034 Rmu_sc0003127.1_g000035 Rmu_sc0003127.1_g000054 Rmu_sc0003127.1_g000055 Rmu_sc0003465.1_g000034 Rmu_sc0005223.1_g000021 Rmu_sc0005302.1_g000004 Rmu_sc0005378.1_g000005 Rmu_sc0005378.1_g000007 Rmu_sc0005378.1_g000017 Rmu_sc0005378.1_g000034 Rmu_sc0005378.1_g000039 Rmu_sc0005378.1_g000042 Rmu_sc0005378.1_g000056 Rmu_sc0005378.1_g000057 Rmu_sc0005378.1_g000058 Rmu_sc0006483.1_g000013 Rmu_sc0008775.1_g000006 Rmu_sc0008775.1_g000011 Rmu_sc0009104.1_g000010 Rmu_sc0009104.1_g000011 Rmu_sc0009104.1_g000020 Rmu_sc0010960.1_g000006 Rmu_sc0011737.1_g000002 Rmu_sc0011737.1_g000004 Rmu_sc0012875.1_g000003 Rmu_sc0013122.1_g000002 Rmu_sc0018944.1_g000002 Rmu_sc0020155.1_g000001 Rmu_sc0020156.1_g000001 Rmu_ssc0000233.1_g000012 Rmu_ssc0000233.1_g000013 Rmu_ssc0000233.1_g000030 Rmu_ssc0000233.1_g000044 Rmu_ssc0000233.1_g000047 Rmu_ssc0000233.1_g000052 Rmu_ssc0000233.1_g000054 Rmu_ssc0000233.1_g000055 Rmu_ssc0000233.1_g000080 Rmu_ssc0000233.1_g000082 Rmu_ssc0000233.1_g000087 Rmu_ssc0000233.1_g000094 Rmu_ssc0000480.1_g000060 Rmu_ssc0000480.1_g000061
rosa_roxburghii Rroxscaffold_1G00017360 Rroxscaffold_1G00017370 Rroxscaffold_1G00060880 Rroxscaffold_2G00095370 Rroxscaffold_2G00095420 Rroxscaffold_2G00095450 Rroxscaffold_2G00095460 Rroxscaffold_2G00095490 Rroxscaffold_2G00095560 Rroxscaffold_2G00095570 Rroxscaffold_2G00096960 Rroxscaffold_2G00097010 Rroxscaffold_2G00126500 Rroxscaffold_3G00233390 Rroxscaffold_3G00233580 Rroxscaffold_3G00263590 Rroxscaffold_6G00411660
rosa_rugosa Rorug01G0142700.1 Rorug01G0148600.1 Rorug02G0212800 Rorug02G0422400 Rorug02G0434700 Rorug02G0434800 Rorug02G0435000 Rorug02G0435200 Rorug02G0435300 Rorug02G0435400 Rorug02G0435700 Rorug02G0435800 Rorug02G0436200 Rorug02G0436300 Rorug03G0102800 Rorug04G0123600 Rorug04G0123700 Rorug04G0123800 Rorug04G0124000 Rorug04G0124000 Rorug04G0124500 Rorug04G0124700 Rorug04G0124900 Rorug05G0028600.1 Rorug05G0356100 Rorug05G0356800 Rorug06G0011900 Rorug07G0092900 Rorug07G0122800 Rorug07G0232500 Rorug07G0232600 Rorug07G0232700
rosa_samantha Rh1AG408900 Rh2AG332700 Rh2AG333400 Rh2AG482100 Rh2AG482200 Rh2AG482500 Rh2AG496000 Rh2AG496100 Rh2AG496200 Rh2AG496300 Rh2AG497100 Rh2AG497200 Rh2AG497400 Rh2BG280300 Rh2BG340500 Rh2BG494400 Rh2BG494900 Rh2BG507800 Rh2BG507900 Rh2BG508000 Rh2BG508100 Rh2BG508300 Rh2BG508500 Rh2BG508700 Rh2BG509200 Rh2BG512700 Rh2CG271900 Rh2CG319100 Rh2CG319400 Rh2CG357200 Rh2CG468400 Rh2CG468500 Rh2CG468800 Rh2CG482200 Rh2CG482300 Rh2CG482400 Rh2CG482500 Rh2CG483200 Rh2CG483300 Rh2CG483500 Rh2CG483600 Rh2DG294600 Rh2DG357100 Rh2DG357700 Rh2DG503400 Rh2DG504300 Rh2DG504900 Rh2DG505500 Rh2DG505900 Rh2DG519000 Rh2DG519100 Rh2DG519300 Rh2DG519400 Rh2DG520000 Rh2DG520200 Rh2DG520500 Rh2DG521000 Rh2DG524300 Rh3AG152400 Rh3AG334400 Rh3BG176100 Rh3CG167200 Rh3DG199400 Rh3DG199500 Rh5AG415900 Rh5BG430800 Rh5CG454300 Rh5DG444600 Rh6AG247500 Rh6AG247700 Rh7AG120600 Rh7AG369800 Rh7AG370800 Rh7AG468300 Rh7BG366400 Rh7CG125200 Rh7CG388700 Rh7CG389400 Rh7CG459600 Rh7DG123300 Rh7DG123400 Rh7DG123800 Rh7DG123900 Rh7DG377200
rosa_wichuraiana Rw0G004850 Rw0G004870 Rw0G013120 Rw1G013520 Rw2G026850 Rw2G026910 Rw2G027120 Rw2G039340 Rw2G039360 Rw2G039410 Rw2G039420 Rw2G039440 Rw2G039520 Rw2G040810 Rw2G040830 Rw2G040850 Rw2G040860 Rw2G040880 Rw2G041210 Rw2G041220 Rw2G041240 Rw2G041250 Rw3G014370 Rw5G010520 Rw5G039070 Rw6G021410 Rw6G021420 Rw7G010280 Rw7G021780 Rw7G031820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 537
AccI GTMKAC 1 cut(s) 103
AciI CCGC 2 cut(s) 318, 1238
AclI AACGTT 1 cut(s) 1258
AclWI GGATC 2 cut(s) 155, 168
AcoI YGGCCR 1 cut(s) 254
AcsI RAATTY 3 cut(s) 504, 713, 1323
AcuI CTGAAG 1 cut(s) 1221
AfaI GTAC 4 cut(s) 137, 498, 529, 1010
AfiI CCNNNNNNNGG 3 cut(s) 324, 486, 1401
AflIII ACRYGT 2 cut(s) 973, 1375
AgeI ACCGGT 2 cut(s) 486, 1439
AgsI TTSAA 6 cut(s) 457, 846, 879, 1267, 1373, 1477
AhdI GACNNNNNGTC 1 cut(s) 871
AleI CACNNNNGTG 1 cut(s) 753
AluBI AGCT 1 cut(s) 1053
AluI AGCT 1 cut(s) 1053
Alw26I GTCTC 1 cut(s) 858
AlwI GGATC 2 cut(s) 155, 168
AlwNI CAGNNNCTG 1 cut(s) 1100
AoxI GGCC 2 cut(s) 254, 520
ApoI RAATTY 3 cut(s) 504, 713, 1323
AseI ATTAAT 1 cut(s) 618
AsiGI ACCGGT 2 cut(s) 486, 1439
Asp700I GAANNNNTTC 2 cut(s) 733, 940
AspS9I GGNCC 1 cut(s) 1000
AsuHPI GGTGA 2 cut(s) 524, 611
AvaII GGWCC 1 cut(s) 1000
BamHI GGATCC 1 cut(s) 160
BanII GRGCYC 1 cut(s) 820
BbsI GAAGAC 2 cut(s) 15, 867
BccI CCATC 6 cut(s) 206, 548, 587, 867, 1124, 1448
BceAI ACGGC 1 cut(s) 738
BcgI CGANNNNNNTGC 2 cut(s) 1343, 1377
BcoDI GTCTC 1 cut(s) 858
BfaI CTAG 3 cut(s) 119, 1020, 1142
BfmI CTRYAG 1 cut(s) 283
BisI GCNGC 1 cut(s) 318
BlsI GCNGC 1 cut(s) 319
BmcAI AGTACT 1 cut(s) 1010
Bme18I GGWCC 1 cut(s) 1000
BmeRI GACNNNNNGTC 1 cut(s) 871
BmgT120I GGNCC 1 cut(s) 1000
BmiI GGNNCC 5 cut(s) 162, 187, 730, 817, 1002
BmrI ACTGGG 1 cut(s) 275
BmsI GCATC 2 cut(s) 68, 1186
BmuI ACTGGG 1 cut(s) 275
BpiI GAAGAC 2 cut(s) 15, 867
BpmI CTGGAG 1 cut(s) 834
BpuEI CTTGAG 1 cut(s) 116
BsaBI GATNNNNATC 1 cut(s) 165
BsaJI CCNNGG 4 cut(s) 251, 523, 1164, 1395
BsaWI WCCGGW 2 cut(s) 486, 1439
BsaXI ACNNNNNCTCC 4 cut(s) 398, 428, 588, 618
Bsc4I CCNNNNNNNGG 3 cut(s) 324, 486, 1401
Bse118I RCCGGY 2 cut(s) 486, 1439
Bse1I ACTGG 4 cut(s) 270, 1015, 1087, 1094
Bse3DI GCAATG 2 cut(s) 312, 1359
Bse8I GATNNNNATC 1 cut(s) 165
BseDI CCNNGG 4 cut(s) 251, 523, 1164, 1395
BseGI GGATG 3 cut(s) 680, 898, 1411
BseJI GATNNNNATC 1 cut(s) 165
BseLI CCNNNNNNNGG 3 cut(s) 324, 486, 1401
BseMI GCAATG 2 cut(s) 312, 1359
BseMII CTCAG 1 cut(s) 996
BseNI ACTGG 4 cut(s) 270, 1015, 1087, 1094
BseRI GAGGAG 1 cut(s) 1184
BshFI GGCC 2 cut(s) 256, 522
BshTI ACCGGT 2 cut(s) 486, 1439
BsiSI CCGG 3 cut(s) 189, 487, 1440
BslFI GGGAC 2 cut(s) 226, 940
BslI CCNNNNNNNGG 3 cut(s) 324, 486, 1401
BsmAI GTCTC 1 cut(s) 858
BsmFI GGGAC 2 cut(s) 226, 940
BsmI GAATGC 1 cut(s) 158
BsnI GGCC 2 cut(s) 256, 522
Bsp1286I GDGCHC 1 cut(s) 820
Bsp1407I TGTACA 1 cut(s) 496
Bsp143I GATC 3 cut(s) 44, 160, 1109
Bsp19I CCATGG 1 cut(s) 1164
BspACI CCGC 2 cut(s) 318, 1238
BspANI GGCC 2 cut(s) 256, 522
BspCNI CTCAG 1 cut(s) 997
BspLI GGNNCC 5 cut(s) 162, 187, 730, 817, 1002
BspMAI CTGCAG 1 cut(s) 287
BspPI GGATC 2 cut(s) 155, 168
BsrDI GCAATG 2 cut(s) 312, 1359
BsrFI RCCGGY 2 cut(s) 486, 1439
BsrGI TGTACA 1 cut(s) 496
BsrI ACTGG 4 cut(s) 270, 1015, 1087, 1094
BssAI RCCGGY 2 cut(s) 486, 1439
BssECI CCNNGG 4 cut(s) 251, 523, 1164, 1395
BssMI GATC 3 cut(s) 44, 160, 1109
BssNAI GTATAC 1 cut(s) 104
BssT1I CCWWGG 2 cut(s) 523, 1164
Bst1107I GTATAC 1 cut(s) 104
Bst4CI ACNGT 5 cut(s) 240, 300, 414, 532, 940
Bst6I CTCTTC 1 cut(s) 1221
BstAPI GCANNNNNTGC 1 cut(s) 914
BstAUI TGTACA 1 cut(s) 496
BstDEI CTNAG 1 cut(s) 1005
BstDSI CCRYGG 1 cut(s) 1164
BstF5I GGATG 3 cut(s) 680, 898, 1411
BstKTI GATC 3 cut(s) 47, 163, 1112
BstMAI GTCTC 1 cut(s) 858
BstMBI GATC 3 cut(s) 44, 160, 1109
BstMWI GCNNNNNNNGC 2 cut(s) 914, 1250
BstNSI RCATGY 2 cut(s) 977, 1379
BstSFI CTRYAG 1 cut(s) 283
BstV2I GAAGAC 2 cut(s) 15, 867
BstX2I RGATCY 1 cut(s) 160
BstYI RGATCY 1 cut(s) 160
BstZ17I GTATAC 1 cut(s) 104
BsuRI GGCC 2 cut(s) 256, 522
BtgI CCRYGG 1 cut(s) 1164
BtsCI GGATG 3 cut(s) 680, 898, 1411
BtsI GCAGTG 2 cut(s) 292, 1463
BtsIMutI CAGTG 3 cut(s) 236, 292, 1463
CaiI CAGNNNCTG 1 cut(s) 1100
Cfr10I RCCGGY 2 cut(s) 486, 1439
Cfr13I GGNCC 1 cut(s) 1000
CseI GACGC 2 cut(s) 76, 1274
Csp6I GTAC 4 cut(s) 136, 497, 528, 1009
CspAI ACCGGT 2 cut(s) 486, 1439
CviAII CATG 6 cut(s) 5, 321, 967, 974, 1165, 1376
CviQI GTAC 4 cut(s) 136, 497, 528, 1009
DdeI CTNAG 1 cut(s) 1005
DpnI GATC 3 cut(s) 46, 162, 1111
DpnII GATC 3 cut(s) 44, 160, 1109
DraI TTTAAA 1 cut(s) 262
DriI GACNNNNNGTC 1 cut(s) 871
EaeI YGGCCR 1 cut(s) 254
Eam1104I CTCTTC 1 cut(s) 1221
Eam1105I GACNNNNNGTC 1 cut(s) 871
EarI CTCTTC 1 cut(s) 1221
Eco130I CCWWGG 2 cut(s) 523, 1164
Eco24I GRGCYC 1 cut(s) 820
Eco47I GGWCC 1 cut(s) 1000
Eco57I CTGAAG 1 cut(s) 1221
EcoRI GAATTC 2 cut(s) 504, 1323
EcoT14I CCWWGG 2 cut(s) 523, 1164
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 820
ErhI CCWWGG 2 cut(s) 523, 1164
FaeI CATG 6 cut(s) 8, 324, 970, 977, 1168, 1379
FalI AAGNNNNNCTT 2 cut(s) 1327, 1359
FaqI GGGAC 2 cut(s) 226, 940
FatI CATG 6 cut(s) 4, 320, 966, 973, 1164, 1375
FauNDI CATATG 1 cut(s) 1431
FblI GTMKAC 1 cut(s) 103
Fnu4HI GCNGC 1 cut(s) 318
FokI GGATG 3 cut(s) 687, 905, 1418
FriOI GRGCYC 1 cut(s) 820
Fsp4HI GCNGC 1 cut(s) 318
FspBI CTAG 3 cut(s) 119, 1020, 1142
GluI GCNGC 1 cut(s) 318
GsuI CTGGAG 1 cut(s) 834
HaeIII GGCC 2 cut(s) 256, 522
HapII CCGG 3 cut(s) 189, 487, 1440
HgaI GACGC 2 cut(s) 76, 1274
Hin1II CATG 6 cut(s) 8, 324, 970, 977, 1168, 1379
HincII GTYRAC 1 cut(s) 549
HindII GTYRAC 1 cut(s) 549
HinfI GANTC 1 cut(s) 607
HpaII CCGG 3 cut(s) 189, 487, 1440
HphI GGTGA 2 cut(s) 524, 611
Hpy166II GTNNAC 4 cut(s) 104, 499, 549, 979
Hpy188I TCNGA 3 cut(s) 116, 1058, 1348
Hpy188III TCNNGA 8 cut(s) 29, 574, 863, 933, 1078, 1193, 1207, 1381
Hpy8I GTNNAC 4 cut(s) 104, 499, 549, 979
Hpy99I CGWCG 1 cut(s) 1046
HpyAV CCTTC 3 cut(s) 509, 1112, 1204
HpyCH4III ACNGT 5 cut(s) 240, 300, 414, 532, 940
HpyCH4IV ACGT 2 cut(s) 1044, 1258
HpyCH4V TGCA 8 cut(s) 4, 81, 285, 331, 461, 917, 1253, 1364
HpyF10VI GCNNNNNNNGC 2 cut(s) 914, 1250
HpyF3I CTNAG 1 cut(s) 1005
HpySE526I ACGT 2 cut(s) 1044, 1258
Hsp92II CATG 6 cut(s) 8, 324, 970, 977, 1168, 1379
Kzo9I GATC 3 cut(s) 44, 160, 1109
LmnI GCTCC 2 cut(s) 406, 815
LweI GCATC 2 cut(s) 68, 1186
MaeI CTAG 3 cut(s) 119, 1020, 1142
MaeII ACGT 2 cut(s) 1044, 1258
MaeIII GTNAC 1 cut(s) 1102
MalI GATC 3 cut(s) 46, 162, 1111
MboI GATC 3 cut(s) 44, 160, 1109
MboII GAAGA 8 cut(s) 20, 411, 454, 570, 867, 1238, 1335, 1437
MflI RGATCY 1 cut(s) 160
MhlI GDGCHC 1 cut(s) 820
MluCI AATT 8 cut(s) 196, 205, 504, 611, 642, 713, 1025, 1323
MlyI GAGTC 1 cut(s) 616
MmeI TCCRAC 4 cut(s) 384, 450, 1296, 1313
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 733, 940
MseI TTAA 7 cut(s) 261, 360, 447, 492, 618, 645, 663
MslI CAYNNNNRTG 2 cut(s) 654, 753
MspI CCGG 3 cut(s) 189, 487, 1440
Mva1269I GAATGC 1 cut(s) 158
MwoI GCNNNNNNNGC 2 cut(s) 914, 1250
NcoI CCATGG 1 cut(s) 1164
NdeI CATATG 1 cut(s) 1431
NdeII GATC 3 cut(s) 44, 160, 1109
NlaIII CATG 6 cut(s) 8, 324, 970, 977, 1168, 1379
NlaIV GGNNCC 5 cut(s) 162, 187, 730, 817, 1002
NmeAIII GCCGAG 2 cut(s) 232, 1420
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 977, 1379
OliI CACNNNNGTG 1 cut(s) 753
PciI ACATGT 2 cut(s) 973, 1375
PctI GAATGC 1 cut(s) 158
PdmI GAANNNNTTC 2 cut(s) 733, 940
PflFI GACNNNGTC 1 cut(s) 120
PinAI ACCGGT 2 cut(s) 486, 1439
PkrI GCNGC 1 cut(s) 319
PleI GAGTC 1 cut(s) 615
PpsI GAGTC 1 cut(s) 615
PscI ACATGT 2 cut(s) 973, 1375
PshBI ATTAAT 1 cut(s) 618
PsiI TTATAA 1 cut(s) 537
Psp1406I AACGTT 1 cut(s) 1258
PspN4I GGNNCC 5 cut(s) 162, 187, 730, 817, 1002
PspPI GGNCC 1 cut(s) 1000
PstI CTGCAG 1 cut(s) 287
PstNI CAGNNNCTG 1 cut(s) 1100
PsuI RGATCY 1 cut(s) 160
PsyI GACNNNGTC 1 cut(s) 120
RsaI GTAC 4 cut(s) 137, 498, 529, 1010
RsaNI GTAC 4 cut(s) 136, 497, 528, 1009
RseI CAYNNNNRTG 2 cut(s) 654, 753
SaqAI TTAA 7 cut(s) 261, 360, 447, 492, 618, 645, 663
SatI GCNGC 1 cut(s) 318
Sau3AI GATC 3 cut(s) 44, 160, 1109
Sau96I GGNCC 1 cut(s) 1000
ScaI AGTACT 1 cut(s) 1010
SchI GAGTC 1 cut(s) 616
SduI GDGCHC 1 cut(s) 820
SfaNI GCATC 2 cut(s) 68, 1186
SfcI CTRYAG 1 cut(s) 283
SinI GGWCC 1 cut(s) 1000
SmiMI CAYNNNNRTG 2 cut(s) 654, 753
SmlI CTYRAG 1 cut(s) 131
SmoI CTYRAG 1 cut(s) 131
Sse9I AATT 8 cut(s) 196, 205, 504, 611, 642, 713, 1025, 1323
SsiI CCGC 2 cut(s) 318, 1238
SspI AATATT 1 cut(s) 111
SspMI CTAG 3 cut(s) 119, 1020, 1142
StyI CCWWGG 2 cut(s) 523, 1164
TaaI ACNGT 5 cut(s) 240, 300, 414, 532, 940
TaiI ACGT 2 cut(s) 1047, 1261
TaqI TCGA 3 cut(s) 28, 862, 1353
TasI AATT 8 cut(s) 196, 205, 504, 611, 642, 713, 1025, 1323
TatI WGTACW 2 cut(s) 496, 1008
TauI GCSGC 1 cut(s) 320
Tru1I TTAA 7 cut(s) 261, 360, 447, 492, 618, 645, 663
Tru9I TTAA 7 cut(s) 261, 360, 447, 492, 618, 645, 663
TscAI CASTG 3 cut(s) 243, 292, 1470
TspDTI ATGAA 8 cut(s) 21, 165, 296, 604, 726, 825, 1286, 1310
TspGWI ACGGA 3 cut(s) 741, 996, 1400
TspRI CASTG 3 cut(s) 243, 292, 1470
Tth111I GACNNNGTC 1 cut(s) 120
VpaK11BI GGWCC 1 cut(s) 1000
VspI ATTAAT 1 cut(s) 618
XapI RAATTY 3 cut(s) 504, 713, 1323
XceI RCATGY 2 cut(s) 977, 1379
XmiI GTMKAC 1 cut(s) 103
XmnI GAANNNNTTC 2 cut(s) 733, 940
XspI CTAG 3 cut(s) 119, 1020, 1142
ZrmI AGTACT 1 cut(s) 1010
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.