AT1G19260

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000122
Physical Location & Seq
Reverse (-)
6657260 .. 6659569
2310 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19260.1

Sequence Viewer

Length: 2310 bp
ATGTATCGGTTTCTGAAAAGAAAATCTCCGCCACCACCTGATATTAATTTAAATGAATTGCCAAGTGATCCCGCAAAGAGAAAAAGCATTCTAAGTTATCATCCTAATCAAAGAGATGAGGTACGACGTGAATATTTGATTAGGGGACCTTGTCAACCTCGTGGTCATAAGTTTAAACAAATAGCAATTGGAAAGGTGTTACGCCGTTTTAATCCAAAATGGTTTGATTTGTATGGTGATTGGTTGGAGTATAGTGTGGAGAAAGAAAAAGCTTTTTGCTTGTATTGTTACTTATTCAGAGATCAAACTGGAAATCAAGGAGGGAGTGATAGCTTTCTATCAACTGGTTTTTGTAGTTGGAATAAGGCTGATAGGTTGGACCAACATGTGGGATTGGATGTGAATAGTTTTCACAATAATGCAAAAAGAAAATGTGAGGATTTGATGAGACAAGGTCAGTCCATCAAGCATGCTCTCCATAAGCAAACCGATGTTGTGAAGAATGATTATCGAATCTGGTTGAATGCTTCCATTGATGTTTCTCGACACTTGTTACATCAAGGATTACCATTTCGTGGTCATGATGAATCAGAAGAGTCAACAAATAAGGGTAATTTTGTAGAGCTTTTGAAGTATACAGCTGGTCAGAATGAAGTTGTAAAGAAAGTTGTGTTGAAAAATGCTCCTAAAAATAACCAGATGACATCTCCACCAATTCAAAAAGATATTGTCCATTGCTTTTCAAAAGAGGTAACTAGATCTATTATTGAAGAAATGGATAATGATGTCTTTGGCTTGCTTGTAGATGAATCGGCTGATGCTTCAGATAAAGAGCAAATGGCAGTAGTTTTTCGCTTCGTTGATAAGTATGGGGTAGTTAAAGAAAGATTTATTGGTGTTATTCATGTGCAAGAGACATCTTCTTTATCTCTAAAAAGTGCTATTGATTCTTTGTTTGCTAAATATGGATTGAGTTTGAAAAAGCTGAGAGGGCAGGGATACGATGGAGCTAGCAACATGAAAGGAGAGTTCAATGGACTGAGATCATTGATTTTGAAAGAAAGTAGCTCTGCATATTATGTGCATTGCTTCGCTCATCAACTACAATTGGTTGTCATGGCAGTTGCAAAAAAACATGTTGAAGTTGGAGAGTTTTTTTATATGATTTCTGTTTTGCTAAATGTTGTTGGAGCTTCTTGCAAAAGAAAAGATAAGATCCGGGAAATCCATCGGCAAAAAGTGGAAGAAAAGATTAGCAATGGTGAAATTAAGACAGGAACTGGGTTAAACCAAGAACTTTCCCTTCAAAGACCTGGAAATACTCGTTGGGGTTCACATTATAAGACTTTGTTGCGTCTTGAGGAGTTGTTTTCATCTATAGTTATAGTTCTCGAGTATATCCAGGATGAAGGCACCGACACCACCAAAAGACAACAAGCATATGGTATTCTCAAGTATTTTCACACCTTTGATTTTGTTTTCTATCTGGAGTTGATGTTGCTTGTTATGGGACTCACTGATAGCTTATCAAAGGCTTTGCAAAGAAAAGATCAAGATATCTTAAATGCTATTTCATTGGTGAAAACTACTAAATGTCAGTTGCAAAAGGTTAGAGACGATGGATGGGATGCTTTTATGGCTAAAGTTAGTTCTTTTAGCGAGAAAAATAACACTGGAATGCTTAAAATGGAGGAAGAATTTGTTGATTCTAGAAGACCAAGGAAAAAGACCGGTATAACCAACTTGCATCACTATAAGGTGGATTGTTTCTACACTGTCTTAGATATGCAACTTCAAGAGTTTAATGACCGCTTTGATGAGGTGAATTCTGAACTACTTATTTGCATGTCATCTTTGAGTCCGATAGATTCTTTTCGTCAGTTTGATAAGTCCATGCTCGTGAGATTGACCGAGTTTTATCCAGATGACTTTAGTTTTGTGGAGCGTAGATCTCTTGATCATCAACTTGAGATCTACCTTGATAATGTGAAAAACGATGAAAGGTTTACAGATTTAAAGTGTCTTGGTGATCTTGCTCGTGTGATGGTAGAGACAAGAAAGCATCTTTCACATCCTTTGGTATATCGTCTTCTAAAGGTATCTTTGATTCTTCCTGTTGCAACGGCAACTGTCGAAAGATGTTTTTCCGCGATGAATTTTGTGAAGACTACATTGCGTAACCGTATCGGTGATATGTTCTTAAGTGATTGTCTTGTTTGTTTTATTGAAAAGCAAGCACTTAACACTGTTACAAACGAATCGGTGATAAAACGATTCCAAGATATGAGTGAACGCAGAGTTCATCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

769

Amino Acids

88.96

Weight (kDa)

8.8

Isoelectric Point (pI)

42.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 110 - 346 3.7e-168 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 686 - 744 6.2e-06 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1341
AccB1I GGYRCC 1 cut(s) 1412
AccB7I CCANNNNNTGG 2 cut(s) 388, 575
AccI GTMKAC 1 cut(s) 635
AccII CGCG 1 cut(s) 2150
AciI CCGC 4 cut(s) 29, 72, 1810, 2148
AclWI GGATC 2 cut(s) 62, 1210
AcsI RAATTY 3 cut(s) 1697, 1825, 2155
AcuI CTGAAG 1 cut(s) 807
AfaI GTAC 1 cut(s) 123
AfiI CCNNNNNNNGG 2 cut(s) 388, 575
AflII CTTAAG 1 cut(s) 2200
AflIII ACRYGT 2 cut(s) 385, 1135
AgeI ACCGGT 1 cut(s) 1730
AjiI CACGTC 1 cut(s) 128
AjnI CCWGG 2 cut(s) 1312, 1401
AjuI GAANNNNNNNTTGG 4 cut(s) 876, 908, 1309, 1341
AluBI AGCT 9 cut(s) 272, 333, 625, 641, 985, 1010, 1068, 1193, 1524
AluI AGCT 9 cut(s) 272, 333, 625, 641, 985, 1010, 1068, 1193, 1524
Alw26I GTCTC 4 cut(s) 442, 908, 1608, 2045
AlwI GGATC 2 cut(s) 62, 1210
AlwNI CAGNNNCTG 1 cut(s) 1280
Ama87I CYCGRG 1 cut(s) 1391
ApoI RAATTY 3 cut(s) 1697, 1825, 2155
ArsI GACNNNNNNTTYG 2 cut(s) 1919, 1951
AseI ATTAAT 1 cut(s) 45
AsiGI ACCGGT 1 cut(s) 1730
AspS9I GGNCC 2 cut(s) 146, 379
AsuC2I CCSGG 1 cut(s) 1220
AsuHPI GGTGA 7 cut(s) 248, 1274, 1591, 1834, 2039, 2201, 2275
AsuNHI GCTAGC 1 cut(s) 1010
AvaI CYCGRG 1 cut(s) 1391
AvaII GGWCC 2 cut(s) 146, 379
BanI GGYRCC 1 cut(s) 1412
BarI GAAGNNNNNNTAC 2 cut(s) 2073, 2105
BauI CACGAG 3 cut(s) 159, 1898, 2037
BbsI GAAGAC 3 cut(s) 1720, 2081, 2171
BccI CCATC 6 cut(s) 470, 998, 1236, 1613, 1617, 2038
BceAI ACGGC 2 cut(s) 189, 2139
BciT130I CCWGG 2 cut(s) 1314, 1403
BciVI GTATCC 1 cut(s) 992
BclI TGATCA 1 cut(s) 1957
BcnI CCSGG 1 cut(s) 1220
BcoDI GTCTC 4 cut(s) 442, 908, 1608, 2045
BfaI CTAG 3 cut(s) 756, 1011, 1710
BfmI CTRYAG 1 cut(s) 1377
BfrI CTTAAG 1 cut(s) 2200
BfuI GTATCC 1 cut(s) 992
BglII AGATCT 3 cut(s) 758, 1949, 1971
Bme1390I CCNGG 3 cut(s) 1220, 1314, 1403
Bme18I GGWCC 2 cut(s) 146, 379
BmeT110I CYCGRG 1 cut(s) 1391
BmgBI CACGTC 1 cut(s) 128
BmgT120I GGNCC 2 cut(s) 146, 379
BmiI GGNNCC 2 cut(s) 147, 1414
BmrFI CCNGG 3 cut(s) 1220, 1314, 1403
BmrI ACTGGG 1 cut(s) 1290
BmsI GCATC 4 cut(s) 808, 1618, 1756, 2071
BmtI GCTAGC 1 cut(s) 1014
BmuI ACTGGG 1 cut(s) 1290
BpiI GAAGAC 3 cut(s) 1720, 2081, 2171
BpmI CTGGAG 1 cut(s) 1508
BpuEI CTTGAG 3 cut(s) 1379, 1436, 1988
BpuMI CCSGG 1 cut(s) 1220
BsaJI CCNNGG 1 cut(s) 1718
BsaWI WCCGGW 1 cut(s) 1730
BsaXI ACNNNNNCTCC 2 cut(s) 1481, 1511
Bsc4I CCNNNNNNNGG 2 cut(s) 388, 575
Bse118I RCCGGY 1 cut(s) 1730
Bse1I ACTGG 4 cut(s) 313, 349, 1285, 1678
Bse3DI GCAATG 4 cut(s) 733, 1084, 1264, 2171
BseBI CCWGG 2 cut(s) 1314, 1403
BseDI CCNNGG 1 cut(s) 1718
BseGI GGATG 6 cut(s) 100, 403, 1411, 1628, 1633, 2071
BseLI CCNNNNNNNGG 2 cut(s) 388, 575
BseMI GCAATG 4 cut(s) 733, 1084, 1264, 2171
BseMII CTCAG 2 cut(s) 977, 1031
BseNI ACTGG 4 cut(s) 313, 349, 1285, 1678
BseRI GAGGAG 1 cut(s) 1376
Bsh1236I CGCG 1 cut(s) 2150
BshNI GGYRCC 1 cut(s) 1412
BshTI ACCGGT 1 cut(s) 1730
BsiHKCI CYCGRG 1 cut(s) 1391
BsiSI CCGG 2 cut(s) 1219, 1731
BslFI GGGAC 2 cut(s) 159, 1524
BslI CCNNNNNNNGG 2 cut(s) 388, 575
BsmAI GTCTC 4 cut(s) 442, 908, 1608, 2045
BsmBI CGTCTC 1 cut(s) 1608
BsmFI GGGAC 2 cut(s) 159, 1524
BsmI GAATGC 3 cut(s) 87, 529, 1683
BsoBI CYCGRG 1 cut(s) 1391
BspACI CCGC 4 cut(s) 29, 72, 1810, 2148
BspCNI CTCAG 2 cut(s) 978, 1032
BspFNI CGCG 1 cut(s) 2150
BspHI TCATGA 1 cut(s) 580
BspLI GGNNCC 2 cut(s) 147, 1414
BspOI GCTAGC 1 cut(s) 1014
BspPI GGATC 2 cut(s) 62, 1210
BspT107I GGYRCC 1 cut(s) 1412
BspTI CTTAAG 1 cut(s) 2200
BsrDI GCAATG 4 cut(s) 733, 1084, 1264, 2171
BsrFI RCCGGY 1 cut(s) 1730
BsrI ACTGG 4 cut(s) 313, 349, 1285, 1678
BssAI RCCGGY 1 cut(s) 1730
BssECI CCNNGG 1 cut(s) 1718
BssNAI GTATAC 1 cut(s) 636
BssSI CACGAG 3 cut(s) 159, 1898, 2037
BssT1I CCWWGG 1 cut(s) 1718
Bst1107I GTATAC 1 cut(s) 636
Bst2BI CACGAG 3 cut(s) 159, 1898, 2037
Bst2UI CCWGG 2 cut(s) 1314, 1403
Bst4CI ACNGT 4 cut(s) 1777, 2131, 2183, 2248
Bst6I CTCTTC 1 cut(s) 588
BstAFI CTTAAG 1 cut(s) 2200
BstC8I GCNNGC 4 cut(s) 471, 797, 1012, 2235
BstDEI CTNAG 4 cut(s) 92, 986, 1040, 1780
BstF5I GGATG 6 cut(s) 100, 403, 1411, 1628, 1633, 2071
BstFNI CGCG 1 cut(s) 2150
BstMAI GTCTC 4 cut(s) 442, 908, 1608, 2045
BstMWI GCNNNNNNNGC 2 cut(s) 991, 1637
BstNI CCWGG 2 cut(s) 1314, 1403
BstNSI RCATGY 4 cut(s) 389, 473, 1139, 1849
BstSCI CCNGG 3 cut(s) 1218, 1312, 1401
BstSFI CTRYAG 1 cut(s) 1377
BstUI CGCG 1 cut(s) 2150
BstV2I GAAGAC 3 cut(s) 1720, 2081, 2171
BstX2I RGATCY 4 cut(s) 758, 1215, 1949, 1971
BstYI RGATCY 4 cut(s) 758, 1215, 1949, 1971
BstZ17I GTATAC 1 cut(s) 636
BsuI GTATCC 1 cut(s) 992
BtgZI GCGATG 1 cut(s) 2165
BtrI CACGTC 1 cut(s) 128
BtsCI GGATG 6 cut(s) 100, 403, 1411, 1628, 1633, 2071
BtsIMutI CAGTG 4 cut(s) 1515, 1671, 1773, 2244
Cac8I GCNNGC 4 cut(s) 471, 797, 1012, 2235
CaiI CAGNNNCTG 1 cut(s) 1280
CciI TCATGA 1 cut(s) 580
Cfr10I RCCGGY 1 cut(s) 1730
Cfr13I GGNCC 2 cut(s) 146, 379
CseI GACGC 1 cut(s) 1343
Csp6I GTAC 1 cut(s) 122
CspAI ACCGGT 1 cut(s) 1730
CviAII CATG 9 cut(s) 386, 470, 581, 905, 1018, 1117, 1136, 1846, 1894
CviQI GTAC 1 cut(s) 122
DdeI CTNAG 4 cut(s) 92, 986, 1040, 1780
DraI TTTAAA 3 cut(s) 51, 175, 2016
Eam1104I CTCTTC 1 cut(s) 588
EarI CTCTTC 1 cut(s) 588
EciI GGCGGA 1 cut(s) 18
Eco130I CCWWGG 1 cut(s) 1718
Eco32I GATATC 1 cut(s) 1558
Eco47I GGWCC 2 cut(s) 146, 379
Eco57I CTGAAG 1 cut(s) 807
Eco88I CYCGRG 1 cut(s) 1391
EcoO109I RGGNCCY 1 cut(s) 146
EcoRI GAATTC 1 cut(s) 1825
EcoRII CCWGG 2 cut(s) 1312, 1401
EcoRV GATATC 1 cut(s) 1558
EcoT14I CCWWGG 1 cut(s) 1718
ErhI CCWWGG 1 cut(s) 1718
Esp3I CGTCTC 1 cut(s) 1608
FaeI CATG 9 cut(s) 389, 473, 584, 908, 1021, 1120, 1139, 1849, 1897
FaqI GGGAC 2 cut(s) 159, 1524
FatI CATG 9 cut(s) 385, 469, 580, 904, 1017, 1116, 1135, 1845, 1893
FauI CCCGC 1 cut(s) 79
FauNDI CATATG 1 cut(s) 1441
FbaI TGATCA 1 cut(s) 1957
FblI GTMKAC 1 cut(s) 635
FokI GGATG 6 cut(s) 87, 410, 1418, 1635, 1640, 2058
FspBI CTAG 3 cut(s) 756, 1011, 1710
GsuI CTGGAG 1 cut(s) 1508
HapII CCGG 2 cut(s) 1219, 1731
HgaI GACGC 1 cut(s) 1343
Hin1II CATG 9 cut(s) 389, 473, 584, 908, 1021, 1120, 1139, 1849, 1897
HincII GTYRAC 2 cut(s) 155, 600
HindII GTYRAC 2 cut(s) 155, 600
HindIII AAGCTT 1 cut(s) 270
HpaII CCGG 2 cut(s) 1219, 1731
HphI GGTGA 7 cut(s) 248, 1274, 1591, 1834, 2039, 2201, 2275
Hpy166II GTNNAC 6 cut(s) 155, 600, 636, 1334, 2007, 2291
Hpy188I TCNGA 7 cut(s) 15, 299, 592, 648, 826, 1831, 1863
Hpy8I GTNNAC 6 cut(s) 155, 600, 636, 1334, 2007, 2291
Hpy99I CGWCG 1 cut(s) 129
HpyAV CCTTC 2 cut(s) 1313, 1403
HpyCH4III ACNGT 4 cut(s) 1777, 2131, 2183, 2248
HpyCH4IV ACGT 1 cut(s) 127
HpyF10VI GCNNNNNNNGC 2 cut(s) 991, 1637
HpyF3I CTNAG 4 cut(s) 92, 986, 1040, 1780
HpySE526I ACGT 1 cut(s) 127
Hsp92II CATG 9 cut(s) 389, 473, 584, 908, 1021, 1120, 1139, 1849, 1897
Ksp22I TGATCA 1 cut(s) 1957
LmnI GCTCC 4 cut(s) 688, 1007, 1190, 1942
LweI GCATC 4 cut(s) 808, 1618, 1756, 2071
MaeI CTAG 3 cut(s) 756, 1011, 1710
MaeII ACGT 1 cut(s) 127
MaeIII GTNAC 6 cut(s) 198, 287, 552, 751, 2177, 2248
MfeI CAATTG 2 cut(s) 186, 1106
MflI RGATCY 4 cut(s) 758, 1215, 1949, 1971
MlyI GAGTC 3 cut(s) 605, 1506, 1867
MmeI TCCRAC 5 cut(s) 225, 338, 357, 1126, 1168
MnlI CCTC 9 cut(s) 112, 168, 314, 430, 742, 983, 1354, 1684, 1813
MslI CAYNNNNRTG 3 cut(s) 417, 1676, 1898
MspA1I CMGCKG 1 cut(s) 641
MspCI CTTAAG 1 cut(s) 2200
MspI CCGG 2 cut(s) 1219, 1731
MspR9I CCNGG 3 cut(s) 1220, 1314, 1403
MssI GTTTAAAC 1 cut(s) 175
MunI CAATTG 2 cut(s) 186, 1106
Mva1269I GAATGC 3 cut(s) 87, 529, 1683
MvaI CCWGG 2 cut(s) 1314, 1403
MvnI CGCG 1 cut(s) 2150
MwoI GCNNNNNNNGC 2 cut(s) 991, 1637
NciI CCSGG 1 cut(s) 1220
NdeI CATATG 1 cut(s) 1441
NheI GCTAGC 1 cut(s) 1010
NlaIII CATG 9 cut(s) 389, 473, 584, 908, 1021, 1120, 1139, 1849, 1897
NlaIV GGNNCC 2 cut(s) 147, 1414
NspI RCATGY 4 cut(s) 389, 473, 1139, 1849
PaeI GCATGC 1 cut(s) 473
PaeR7I CTCGAG 1 cut(s) 1391
PagI TCATGA 1 cut(s) 580
PciI ACATGT 2 cut(s) 385, 1135
PctI GAATGC 3 cut(s) 87, 529, 1683
PfeI GAWTC 9 cut(s) 513, 587, 809, 947, 1706, 1868, 2107, 2258, 2274
PflFI GACNNNGTC 2 cut(s) 150, 453
PflMI CCANNNNNTGG 2 cut(s) 388, 575
PfoI TCCNGGA 2 cut(s) 1218, 1401
PinAI ACCGGT 1 cut(s) 1730
PleI GAGTC 3 cut(s) 604, 1506, 1866
PmeI GTTTAAAC 1 cut(s) 175
PpsI GAGTC 3 cut(s) 604, 1506, 1866
PpuMI RGGWCCY 1 cut(s) 146
PscI ACATGT 2 cut(s) 385, 1135
PshBI ATTAAT 1 cut(s) 45
PsiI TTATAA 1 cut(s) 1341
Psp5II RGGWCCY 1 cut(s) 146
Psp6I CCWGG 2 cut(s) 1312, 1401
PspGI CCWGG 2 cut(s) 1312, 1401
PspN4I GGNNCC 2 cut(s) 147, 1414
PspPI GGNCC 2 cut(s) 146, 379
PspPPI RGGWCCY 1 cut(s) 146
PstNI CAGNNNCTG 1 cut(s) 1280
PsuI RGATCY 4 cut(s) 758, 1215, 1949, 1971
PsyI GACNNNGTC 2 cut(s) 150, 453
PvuII CAGCTG 1 cut(s) 641
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
RseI CAYNNNNRTG 3 cut(s) 417, 1676, 1898
Sau96I GGNCC 2 cut(s) 146, 379
SchI GAGTC 3 cut(s) 605, 1506, 1867
ScrFI CCNGG 3 cut(s) 1220, 1314, 1403
SfaNI GCATC 4 cut(s) 808, 1618, 1756, 2071
SfcI CTRYAG 1 cut(s) 1377
Sfr274I CTCGAG 1 cut(s) 1391
SinI GGWCC 2 cut(s) 146, 379
SlaI CTCGAG 1 cut(s) 1391
SmiI ATTTAAAT 1 cut(s) 51
SmiMI CAYNNNNRTG 3 cut(s) 417, 1676, 1898
SmlI CTYRAG 5 cut(s) 1358, 1391, 1451, 1967, 2200
SmoI CTYRAG 5 cut(s) 1358, 1391, 1451, 1967, 2200
SphI GCATGC 1 cut(s) 473
SsiI CCGC 4 cut(s) 29, 72, 1810, 2148
SspI AATATT 1 cut(s) 134
SspMI CTAG 3 cut(s) 756, 1011, 1710
StyD4I CCNGG 3 cut(s) 1218, 1312, 1401
StyI CCWWGG 1 cut(s) 1718
SwaI ATTTAAAT 1 cut(s) 51
TaaI ACNGT 4 cut(s) 1777, 2131, 2183, 2248
TaiI ACGT 1 cut(s) 130
TaqI TCGA 4 cut(s) 511, 544, 1392, 2133
TaqII GACCGA 1 cut(s) 1925
TfiI GAWTC 9 cut(s) 513, 587, 809, 947, 1706, 1868, 2107, 2258, 2274
TscAI CASTG 4 cut(s) 1522, 1678, 1780, 2251
TspRI CASTG 4 cut(s) 1522, 1678, 1780, 2251
Tth111I GACNNNGTC 2 cut(s) 150, 453
Van91I CCANNNNNTGG 2 cut(s) 388, 575
Vha464I CTTAAG 1 cut(s) 2200
VpaK11BI GGWCC 2 cut(s) 146, 379
VspI ATTAAT 1 cut(s) 45
XapI RAATTY 3 cut(s) 1697, 1825, 2155
XbaI TCTAGA 1 cut(s) 1709
XceI RCATGY 4 cut(s) 389, 473, 1139, 1849
XhoI CTCGAG 1 cut(s) 1391
XmiI GTMKAC 1 cut(s) 635
XspI CTAG 3 cut(s) 756, 1011, 1710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.