Rw4G003260

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000122
Physical Location & Seq
Forward (+)
6543366 .. 6546757
3392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G003260.1

Sequence Viewer

Length: 1263 bp
ATGACGGATCACCGGAAACCCAAGAGGTACAAAAATCTTTTGTCATGGTTTACAAGTAGTACTCCATCAAGCTATGGGAGTAGAAATGTGACTGAGAATTCTGTTAATGATGTCCCTTTAAACCCTTCTCCATCTATTCCACTAGAAGAGTGTCATAATGAAAGAATTCAGAGAGAAGAAAGTTTTGACGTTAGTTCTCTTGAACGTGATCTAGGAATACGACGTCCAATATGCAAGTACCCTTTGAATGAGCGTGACAATATTCGAAGAGCTTATGTGGTCTTAGGACCGTATCAACCTCACTTAACATTTTGCTTCCCTTGTTTCTTGTTTGATAGATACCCATCCCATCATCCAGCATTTACTGAGCATGGGTTTCAAGGTTGGAAGAATGTTATGTCAAAAAAATCTGGCATTTTCTTTCACATGGGAGGCATAAATTGCCCCCATAATATTGCCATGCAGAAGTGGGAGTCACTAAGAAACCCATCTAAGTATATTGAAAGAGTGATTAGCACACAATCATCACAAGAAGTAGTGATACGCTCAAAGCAAGCGCGCAATTTAACCTTGAAAATGTCATCGATGTGCTTTAGAGGCCATGATGAATCGGTTAATTCATCCAATGGTGGCAATTTCAACGCGGTTGTGGAATCCTTTGGAAGAATGAATATAGATGTTCGTAGAGTCTTTCAAAATGCTCCTGGAAATGCCAAGTATATTTCTCCCCTTATTCAAAAACAAATTCTAAATATACTTGGTAACAAAGTTAGAACCAAGATTCGGGAGGAAGTGGGAGATGCCAAATTTTGTATCCTTGTTGATGAAGTTGTTGATGTATCTAATAGGAAACAAATGGATATCATTCTTCGATTTGTTAATTACACTTGTTCTCAAACTCTAAAAGATGAGATATCCAAAGTCCTTACTCAATATGATCTTCAAGTAGAAAATATGTGTGGGCAAGGATATGATGGTGCTTGCAACATGTGGGGTGAATTTAATGGTTTACAAGCTTTGTTTCGTGAAGAGTGTCCATATGCATATTATGTTCATTGTTTTGCTCATCGCTTACAATTGACTTTAAATGCTGCAGCTAAAGGGGTGCATGATATTTGGGAATTCTTTTCAACTCTAAGTTTGATTGTAAATTTTGTTGATACTTCTGCAAAAAGACATTCAGCTTTGAGAGTTATCAGGGAAGAAGAAATTGCAGATTTAGTGGCTGCTGGAGCACTTGAGACTAGTAGAGGTGCTGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

420

Amino Acids

48.03

Weight (kDa)

8.51

Isoelectric Point (pI)

54.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 142 - 336 4.8e-26 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 226
AccII CGCG 2 cut(s) 559, 644
AciI CCGC 1 cut(s) 644
AclWI GGATC 1 cut(s) 15
AcsI RAATTY 7 cut(s) 97, 165, 744, 806, 998, 1121, 1150
AcyI GRCGYC 1 cut(s) 223
AfaI GTAC 3 cut(s) 29, 61, 239
AfiI CCNNNNNNNGG 1 cut(s) 783
AflIII ACRYGT 1 cut(s) 987
AhlI ACTAGT 1 cut(s) 1244
AjnI CCWGG 1 cut(s) 703
AluBI AGCT 5 cut(s) 72, 272, 1016, 1097, 1184
AluI AGCT 5 cut(s) 72, 272, 1016, 1097, 1184
Alw21I GWGCWC 1 cut(s) 1237
Alw26I GTCTC 1 cut(s) 1235
AlwI GGATC 1 cut(s) 15
AoxI GGCC 1 cut(s) 598
ApeKI GCWGC 3 cut(s) 1091, 1094, 1226
ApoI RAATTY 7 cut(s) 97, 165, 744, 806, 998, 1121, 1150
Asp700I GAANNNNTTC 1 cut(s) 165
AspLEI GCGC 2 cut(s) 559, 561
AspS9I GGNCC 1 cut(s) 287
AsuHPI GGTGA 1 cut(s) 1007
AsuII TTCGAA 1 cut(s) 265
AvaII GGWCC 1 cut(s) 287
BarI GAAGNNNNNNTAC 2 cut(s) 525, 557
Bbv12I GWGCWC 1 cut(s) 1237
BbvI GCAGC 3 cut(s) 1078, 1106, 1213
BccI CCATC 6 cut(s) 73, 139, 352, 357, 496, 968
BciT130I CCWGG 1 cut(s) 705
BciVI GTATCC 1 cut(s) 824
BcoDI GTCTC 1 cut(s) 1235
BcuI ACTAGT 1 cut(s) 1244
BfaI CTAG 3 cut(s) 143, 212, 1245
BfmI CTRYAG 1 cut(s) 1092
BfuI GTATCC 1 cut(s) 824
BisI GCNGC 3 cut(s) 1092, 1095, 1227
BlsI GCNGC 3 cut(s) 1093, 1096, 1228
BmcAI AGTACT 1 cut(s) 61
Bme1390I CCNGG 1 cut(s) 705
Bme18I GGWCC 1 cut(s) 287
BmgT120I GGNCC 1 cut(s) 287
BmrFI CCNGG 1 cut(s) 705
BmsI GCATC 1 cut(s) 790
BpmI CTGGAG 1 cut(s) 1251
Bpu14I TTCGAA 1 cut(s) 265
BpuEI CTTGAG 1 cut(s) 1259
Bsa29I ATCGAT 1 cut(s) 584
BsaBI GATNNNNATC 1 cut(s) 343
BsaHI GRCGYC 1 cut(s) 223
BsaWI WCCGGW 1 cut(s) 12
Bsc4I CCNNNNNNNGG 1 cut(s) 783
Bse8I GATNNNNATC 1 cut(s) 343
BseBI CCWGG 1 cut(s) 705
BseCI ATCGAT 1 cut(s) 584
BseGI GGATG 3 cut(s) 344, 352, 620
BseJI GATNNNNATC 1 cut(s) 343
BseLI CCNNNNNNNGG 1 cut(s) 783
BseMII CTCAG 2 cut(s) 84, 357
BsePI GCGCGC 1 cut(s) 557
BseXI GCAGC 3 cut(s) 1078, 1106, 1213
Bsh1236I CGCG 2 cut(s) 559, 644
BshFI GGCC 1 cut(s) 600
BshVI ATCGAT 1 cut(s) 584
BsiHKAI GWGCWC 1 cut(s) 1237
BsiSI CCGG 1 cut(s) 13
BslFI GGGAC 1 cut(s) 98
BslI CCNNNNNNNGG 1 cut(s) 783
BsmAI GTCTC 1 cut(s) 1235
BsmFI GGGAC 1 cut(s) 98
BsnI GGCC 1 cut(s) 600
Bsp119I TTCGAA 1 cut(s) 265
Bsp1286I GDGCHC 1 cut(s) 1237
Bsp143I GATC 3 cut(s) 7, 208, 937
BspACI CCGC 1 cut(s) 644
BspANI GGCC 1 cut(s) 600
BspCNI CTCAG 2 cut(s) 85, 358
BspDI ATCGAT 1 cut(s) 584
BspFNI CGCG 2 cut(s) 559, 644
BspMAI CTGCAG 1 cut(s) 1096
BspPI GGATC 1 cut(s) 15
BspQI GCTCTTC 1 cut(s) 262
BspT104I TTCGAA 1 cut(s) 265
BssHII GCGCGC 1 cut(s) 557
BssMI GATC 3 cut(s) 7, 208, 937
BssNI GRCGYC 1 cut(s) 223
Bst2UI CCWGG 1 cut(s) 705
Bst4CI ACNGT 1 cut(s) 291
Bst6I CTCTTC 3 cut(s) 141, 262, 1023
BstACI GRCGYC 1 cut(s) 223
BstAPI GCANNNNNTGC 1 cut(s) 441
BstBI TTCGAA 1 cut(s) 265
BstC8I GCNNGC 3 cut(s) 555, 559, 982
BstDEI CTNAG 6 cut(s) 93, 283, 366, 479, 492, 1136
BstF5I GGATG 3 cut(s) 344, 352, 620
BstFNI CGCG 2 cut(s) 559, 644
BstHHI GCGC 2 cut(s) 559, 561
BstKTI GATC 3 cut(s) 10, 211, 940
BstMAI GTCTC 1 cut(s) 1235
BstMBI GATC 3 cut(s) 7, 208, 937
BstMWI GCNNNNNNNGC 3 cut(s) 441, 597, 1232
BstNI CCWGG 1 cut(s) 705
BstNSI RCATGY 1 cut(s) 991
BstSCI CCNGG 1 cut(s) 703
BstSFI CTRYAG 1 cut(s) 1092
BstUI CGCG 2 cut(s) 559, 644
BstV1I GCAGC 3 cut(s) 1078, 1106, 1213
Bsu15I ATCGAT 1 cut(s) 584
BsuI GTATCC 1 cut(s) 824
BsuRI GGCC 1 cut(s) 600
BsuTUI ATCGAT 1 cut(s) 584
BtgZI GCGATG 1 cut(s) 1052
BtsCI GGATG 3 cut(s) 344, 352, 620
Cac8I GCNNGC 3 cut(s) 555, 559, 982
CfoI GCGC 2 cut(s) 559, 561
Cfr13I GGNCC 1 cut(s) 287
ClaI ATCGAT 1 cut(s) 584
Csp6I GTAC 3 cut(s) 28, 60, 238
CviAII CATG 7 cut(s) 45, 371, 427, 460, 602, 988, 1109
CviJI RGCY 7 cut(s) 72, 272, 600, 1016, 1097, 1184, 1226
CviKI_1 RGCY 7 cut(s) 72, 272, 600, 1016, 1097, 1184, 1226
CviQI GTAC 3 cut(s) 28, 60, 238
DdeI CTNAG 6 cut(s) 93, 283, 366, 479, 492, 1136
DpnI GATC 3 cut(s) 9, 210, 939
DpnII GATC 3 cut(s) 7, 208, 937
DraI TTTAAA 2 cut(s) 120, 1086
Eam1104I CTCTTC 3 cut(s) 141, 262, 1023
EarI CTCTTC 3 cut(s) 141, 262, 1023
Eco32I GATATC 2 cut(s) 862, 915
Eco47I GGWCC 1 cut(s) 287
EcoRI GAATTC 3 cut(s) 97, 165, 1121
EcoRII CCWGG 1 cut(s) 703
EcoRV GATATC 2 cut(s) 862, 915
EcoT22I ATGCAT 1 cut(s) 1045
FaeI CATG 7 cut(s) 48, 374, 430, 463, 605, 991, 1112
FaqI GGGAC 1 cut(s) 98
FatI CATG 7 cut(s) 44, 370, 426, 459, 601, 987, 1108
FauNDI CATATG 1 cut(s) 1039
Fnu4HI GCNGC 3 cut(s) 1092, 1095, 1227
FokI GGATG 3 cut(s) 331, 339, 607
Fsp4HI GCNGC 3 cut(s) 1092, 1095, 1227
FspBI CTAG 3 cut(s) 143, 212, 1245
GlaI GCGC 2 cut(s) 558, 560
GluI GCNGC 3 cut(s) 1092, 1095, 1227
GsuI CTGGAG 1 cut(s) 1251
HaeIII GGCC 1 cut(s) 600
HapII CCGG 1 cut(s) 13
HhaI GCGC 2 cut(s) 559, 561
Hin1I GRCGYC 1 cut(s) 223
Hin1II CATG 7 cut(s) 48, 374, 430, 463, 605, 991, 1112
Hin6I GCGC 2 cut(s) 557, 559
HinP1I GCGC 2 cut(s) 557, 559
HindIII AAGCTT 1 cut(s) 1014
HinfI GANTC 5 cut(s) 473, 608, 653, 687, 781
HpaII CCGG 1 cut(s) 13
HphI GGTGA 1 cut(s) 1007
Hpy166II GTNNAC 2 cut(s) 51, 1010
Hpy188I TCNGA 1 cut(s) 171
Hpy188III TCNNGA 3 cut(s) 200, 785, 1025
Hpy8I GTNNAC 2 cut(s) 51, 1010
Hpy99I CGWCG 1 cut(s) 225
HpyAV CCTTC 1 cut(s) 135
HpyCH4III ACNGT 1 cut(s) 291
HpyCH4IV ACGT 3 cut(s) 189, 205, 223
HpyCH4V TGCA 8 cut(s) 234, 463, 984, 1043, 1094, 1108, 1169, 1214
HpyF10VI GCNNNNNNNGC 3 cut(s) 441, 597, 1232
HpyF3I CTNAG 6 cut(s) 93, 283, 366, 479, 492, 1136
HpySE526I ACGT 3 cut(s) 189, 205, 223
Hsp92I GRCGYC 1 cut(s) 223
Hsp92II CATG 7 cut(s) 48, 374, 430, 463, 605, 991, 1112
HspAI GCGC 2 cut(s) 557, 559
Kzo9I GATC 3 cut(s) 7, 208, 937
LguI GCTCTTC 1 cut(s) 262
LmnI GCTCC 2 cut(s) 706, 1232
LpnPI CCDG 7 cut(s) 26, 369, 396, 690, 717, 1183, 1215
Lsp1109I GCAGC 3 cut(s) 1078, 1106, 1213
LweI GCATC 1 cut(s) 790
MaeI CTAG 3 cut(s) 143, 212, 1245
MaeII ACGT 3 cut(s) 189, 205, 223
MaeIII GTNAC 4 cut(s) 88, 254, 474, 761
MalI GATC 3 cut(s) 9, 210, 939
MboI GATC 3 cut(s) 7, 208, 937
MfeI CAATTG 1 cut(s) 1076
MhlI GDGCHC 1 cut(s) 1237
MlyI GAGTC 2 cut(s) 482, 696
MmeI TCCRAC 1 cut(s) 365
MnlI CCTC 6 cut(s) 18, 309, 425, 590, 781, 1244
Mph1103I ATGCAT 1 cut(s) 1045
MroXI GAANNNNTTC 1 cut(s) 165
MseI TTAA 8 cut(s) 105, 119, 305, 566, 615, 879, 1002, 1085
MslI CAYNNNNRTG 1 cut(s) 586
MspI CCGG 1 cut(s) 13
MspR9I CCNGG 1 cut(s) 705
MunI CAATTG 1 cut(s) 1076
MvaI CCWGG 1 cut(s) 705
MvnI CGCG 2 cut(s) 559, 644
MwoI GCNNNNNNNGC 3 cut(s) 441, 597, 1232
NdeI CATATG 1 cut(s) 1039
NdeII GATC 3 cut(s) 7, 208, 937
NlaIII CATG 7 cut(s) 48, 374, 430, 463, 605, 991, 1112
NmuCI GTSAC 3 cut(s) 88, 254, 474
NsiI ATGCAT 1 cut(s) 1045
NspI RCATGY 1 cut(s) 991
NspV TTCGAA 1 cut(s) 265
PauI GCGCGC 1 cut(s) 557
PciI ACATGT 1 cut(s) 987
PciSI GCTCTTC 1 cut(s) 262
PdmI GAANNNNTTC 1 cut(s) 165
PfeI GAWTC 3 cut(s) 608, 653, 781
PfoI TCCNGGA 1 cut(s) 703
PkrI GCNGC 3 cut(s) 1093, 1096, 1228
PleI GAGTC 2 cut(s) 481, 695
PpsI GAGTC 2 cut(s) 481, 695
PscI ACATGT 1 cut(s) 987
Psp6I CCWGG 1 cut(s) 703
PspGI CCWGG 1 cut(s) 703
PspPI GGNCC 1 cut(s) 287
PstI CTGCAG 1 cut(s) 1096
PteI GCGCGC 1 cut(s) 557
RsaI GTAC 3 cut(s) 29, 61, 239
RsaNI GTAC 3 cut(s) 28, 60, 238
RseI CAYNNNNRTG 1 cut(s) 586
SapI GCTCTTC 1 cut(s) 262
SaqAI TTAA 8 cut(s) 105, 119, 305, 566, 615, 879, 1002, 1085
SatI GCNGC 3 cut(s) 1092, 1095, 1227
Sau3AI GATC 3 cut(s) 7, 208, 937
Sau96I GGNCC 1 cut(s) 287
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 2 cut(s) 482, 696
ScrFI CCNGG 1 cut(s) 705
SduI GDGCHC 1 cut(s) 1237
SfaNI GCATC 1 cut(s) 790
SfcI CTRYAG 1 cut(s) 1092
SfuI TTCGAA 1 cut(s) 265
SinI GGWCC 1 cut(s) 287
SmiMI CAYNNNNRTG 1 cut(s) 586
SmlI CTYRAG 1 cut(s) 1238
SmoI CTYRAG 1 cut(s) 1238
SpeI ACTAGT 1 cut(s) 1244
SsiI CCGC 1 cut(s) 644
SspI AATATT 2 cut(s) 262, 454
SspMI CTAG 3 cut(s) 143, 212, 1245
StyD4I CCNGG 1 cut(s) 703
TaaI ACNGT 1 cut(s) 291
TaiI ACGT 3 cut(s) 192, 208, 226
TaqI TCGA 3 cut(s) 265, 584, 871
TatI WGTACW 1 cut(s) 59
TfiI GAWTC 3 cut(s) 608, 653, 781
Tru1I TTAA 8 cut(s) 105, 119, 305, 566, 615, 879, 1002, 1085
Tru9I TTAA 8 cut(s) 105, 119, 305, 566, 615, 879, 1002, 1085
TseFI GTSAC 3 cut(s) 88, 254, 474
TseI GCWGC 3 cut(s) 1091, 1094, 1226
Tsp45I GTSAC 3 cut(s) 88, 254, 474
TspDTI ATGAA 6 cut(s) 174, 609, 621, 683, 840, 1043
TspGWI ACGGA 1 cut(s) 20
VpaK11BI GGWCC 1 cut(s) 287
XapI RAATTY 7 cut(s) 97, 165, 744, 806, 998, 1121, 1150
XceI RCATGY 1 cut(s) 991
XmnI GAANNNNTTC 1 cut(s) 165
XspI CTAG 3 cut(s) 143, 212, 1245
ZraI GACGTC 1 cut(s) 224
ZrmI AGTACT 1 cut(s) 61
Zsp2I ATGCAT 1 cut(s) 1045
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.