RchiOBHm_Chr3g0466101

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000122
Physical Location & Seq
Reverse (-)
12661390 .. 12663957
2568 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43221

Sequence Viewer

Length: 2073 bp
ATGTTGAGTCTTCAAGTTCATATGGTGTATTGCTTCCCTTGTTTTCTATTTGACACTGAAGATTCTCAGCATACAGCATTCACCGTTGATGGGTTTAAGGCTTGGAAGAGGGTTTGTGGTAGTGATAATGTGTTGATGAAGCATGTAGGAGGCCTTAATTCTCCCCATCATGCTGCAATGCAAAAATGGGATTTATTAAGAAATCCTACCAAACAAATTGAAACAATTTTTCAGTCAAAATCTAGTAAGGATATAGAGGACAATCGATTGAGGCTTAAGGCTTCAATAGAAAGTGTAAGATTGCTAGCTAATCAAGGAGCTGCTTTTAGAGGCCATGATGAAACTGAAAACTCATTGAATGCGGGATATTTTAGAGAAGTCATAAAATCTTTTTCAAGAATGAGTATTGAGGTTGAGAGAGTTGTTTTGGGAAATGCTCCCGGAAATGCCAAGTACATTAGTCCATCAATTCAAAAGCAACTTCTAAATATTCTTGGTAATAAAGTGAGGAACAAGATACGTGAAGAAGTTGGAGATTCCAAATATTGTATTCTTGTTGATGAAGCAGTAGATATATCTAGTAAGGAACAAATGGCCATTATTTTGAGGTTTGTTGATTGTCAAGGTATTATTCGAGAACGATTTTTTAAGATTGTGAGTGTTCCTAACACTACCTCACAAACTCTTAAAGATGAGATTTCTAAAGTACTTACTATGTACAATCTTCAAGTGAGAAATATGCGTGGTCAAGGATATGATGGTGCTAGCAATATGAGAGGTATTTATAATGGGTTACAAGCATTGTTTCTTGAAGAGTGTCCTTATGCTTATTATGTGCATTGTTTTGCTCACCGCTTGCAATTGTCATTGAATGCTACAGCTAAAGGGGTGCCGGAGATTTGGCAATTATTTTCAAGTTTAAGTTTAATTGTGAATTTTGTTGATTCTTCTGCTAAGCGTCATTCTGCATTAAAAGTTGTGAGAAAGGAAGAAATTGCAGATTTGGTAGCGTGTGGCCAACTTCAAACAGGTACTGGTGCTAATCAAGTTTGTACTTTGCAACGAGCTGCTGCTACACGTTGGAGCTCACATTTTCGTTCAATTAAGAGTTTGATTGAATTGTTTAGTTCAACCAAAAAAACTCTTAATTATATGATTGAGCAAGGACCCAAGGAATTGCAAGGAGAAGCTGTGGCTGTTCTTAAAGCTATGATGTCTTTTGATTTTGTGTTCTGCTTGCTTCTAATGCACAAATTGATGAAAATTACTGAAGTTCTTTGTCAGACATTGCAGCGAAAATCTCTTGACTTCGTACATGCTATGAAGTTTGTTGGACATACAAAATCATTTCTTCAAGAGATGAGAGAAGAAGGCTGGGATGACTTGGTAAGAAATGTTGAAACTTTTTGTGAGAAACATGATATTGATATGCCTGATATGAATGCTCGTTATAAGGATGGTACAGGTCGTCGTTGCCAACAAAGAGATTTCATTACAGTTGAGCATCATTACCATATAGATGTCTTCAATGCTTTAGTTGATTTTCAGTTGAGCGAGTTGAATAGAAGATTCTCAGACCAAACATCTGAACTTCTTATACTTAGTTCAACCTTGGATCCTCGTGATAACTTCAGTAATTTTAAAACTGAAGGTGCATGCAATCTTGCAAAGAAGTATTATCCTGAAGATTTTGTTGATAGTGAAATGTTTGCTCTAGAATTAGAGTGTGCATATTATGAGAAGGATATGCGTAGTGATCCAAAGTTCCAGAATTTGGAATCCATTTCTGATTTGTGCAGAATGTTGGTTCAATCAAGGAAGTCAGAATTTTTCCCTATGCTTTATAGATTGATTTGTCTAGTTTTGACTATTCCTGTTTCTACGGCGACCACTGAAAGGGCATTTTCAGCTATGAACATCATTAAGAATAAACTTAGAAACAAGATGGAGGATGAGTTTCTTGGTGATTGTATGGTCCTTCACATTGAGAAAGAATATGCTGAATCTATTGACAATGAATCGGTGATCAAAGAGTTTGAAGCTTGTGGAACTCGTAGAGTTAGATTTAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

690

Amino Acids

79.17

Weight (kDa)

7.0

Isoelectric Point (pI)

50.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 27 - 264 6e-51 Domain of unknown function (DUF4371)
Dimer_Tnp_hAT PF05699 603 - 664 1.1e-10 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 786, 1452
AccB1I GGYRCC 1 cut(s) 889
AccB7I CCANNNNNTGG 1 cut(s) 1774
AciI CCGC 2 cut(s) 362, 853
AclWI GGATC 3 cut(s) 1610, 1623, 1751
AcoI YGGCCR 2 cut(s) 594, 1015
AcsI RAATTY 3 cut(s) 934, 1771, 1826
AcuI CTGAAG 5 cut(s) 78, 1290, 1615, 1668, 1704
AfaI GTAC 7 cut(s) 455, 708, 719, 1033, 1054, 1314, 1462
AfiI CCNNNNNNNGG 3 cut(s) 90, 1774, 1896
AflII CTTAAG 1 cut(s) 275
AflIII ACRYGT 1 cut(s) 1076
AluBI AGCT 9 cut(s) 308, 320, 881, 1067, 1086, 1190, 1208, 1910, 2042
AluI AGCT 9 cut(s) 308, 320, 881, 1067, 1086, 1190, 1208, 1910, 2042
Alw21I GWGCWC 1 cut(s) 1088
AlwI GGATC 3 cut(s) 1610, 1623, 1751
AlwNI CAGNNNCTG 1 cut(s) 1034
AoxI GGCC 4 cut(s) 151, 331, 594, 1015
ApeKI GCWGC 5 cut(s) 173, 320, 1067, 1070, 1291
ApoI RAATTY 3 cut(s) 934, 1771, 1826
AspS9I GGNCC 2 cut(s) 1166, 1975
AsuC2I CCSGG 1 cut(s) 441
AsuHPI GGTGA 4 cut(s) 73, 842, 1976, 2035
AsuNHI GCTAGC 2 cut(s) 304, 764
AvaII GGWCC 2 cut(s) 1166, 1975
BalI TGGCCA 2 cut(s) 596, 1017
BamHI GGATCC 1 cut(s) 1615
BanI GGYRCC 1 cut(s) 889
BanII GRGCYC 1 cut(s) 1088
BauI CACGAG 1 cut(s) 1620
BbsI GAAGAC 2 cut(s) 2, 1516
Bbv12I GWGCWC 1 cut(s) 1088
BbvI GCAGC 5 cut(s) 160, 307, 1054, 1057, 1303
BccI CCATC 6 cut(s) 83, 174, 472, 752, 1451, 1939
BceAI ACGGC 1 cut(s) 1899
BclI TGATCA 1 cut(s) 2025
BcnI CCSGG 1 cut(s) 441
BfaI CTAG 6 cut(s) 243, 305, 579, 765, 1715, 1859
BfmI CTRYAG 1 cut(s) 876
BfrI CTTAAG 1 cut(s) 275
BisI GCNGC 5 cut(s) 174, 321, 1068, 1071, 1292
BlpI GCTNAGC 1 cut(s) 954
BlsI GCNGC 5 cut(s) 175, 322, 1069, 1072, 1293
BmcAI AGTACT 1 cut(s) 708
Bme1390I CCNGG 1 cut(s) 441
Bme18I GGWCC 2 cut(s) 1166, 1975
BmgT120I GGNCC 2 cut(s) 1166, 1975
BmiI GGNNCC 3 cut(s) 891, 1168, 1617
BmrFI CCNGG 1 cut(s) 441
BmsI GCATC 1 cut(s) 1513
BmtI GCTAGC 2 cut(s) 308, 768
BpiI GAAGAC 2 cut(s) 2, 1516
Bpu1102I GCTNAGC 1 cut(s) 954
BpuMI CCSGG 1 cut(s) 441
Bsa29I ATCGAT 1 cut(s) 265
BsaAI YACGTR 1 cut(s) 521
BsaJI CCNNGG 2 cut(s) 1170, 1611
BsaXI ACNNNNNCTCC 4 cut(s) 1176, 1206, 1940, 1970
Bsc4I CCNNNNNNNGG 3 cut(s) 90, 1774, 1896
Bse1I ACTGG 1 cut(s) 1039
Bse3DI GCAATG 2 cut(s) 183, 1286
BseCI ATCGAT 1 cut(s) 265
BseDI CCNNGG 2 cut(s) 1170, 1611
BseGI GGATG 3 cut(s) 1384, 1462, 1957
BseLI CCNNNNNNNGG 3 cut(s) 90, 1774, 1896
BseMI GCAATG 2 cut(s) 183, 1286
BseMII CTCAG 2 cut(s) 80, 1587
BseNI ACTGG 1 cut(s) 1039
BseXI GCAGC 5 cut(s) 160, 307, 1054, 1057, 1303
BseYI CCCAGC 1 cut(s) 1374
BsgI GTGCAG 1 cut(s) 1816
BshFI GGCC 4 cut(s) 153, 333, 596, 1017
BshNI GGYRCC 1 cut(s) 889
BshVI ATCGAT 1 cut(s) 265
BsiHKAI GWGCWC 1 cut(s) 1088
BsiSI CCGG 2 cut(s) 441, 893
BslI CCNNNNNNNGG 3 cut(s) 90, 1774, 1896
BsmI GAATGC 4 cut(s) 77, 364, 877, 1447
BsnI GGCC 4 cut(s) 153, 333, 596, 1017
Bsp1286I GDGCHC 1 cut(s) 1088
Bsp1407I TGTACA 1 cut(s) 717
Bsp143I GATC 3 cut(s) 1615, 1756, 2025
Bsp1720I GCTNAGC 1 cut(s) 954
BspACI CCGC 2 cut(s) 362, 853
BspANI GGCC 4 cut(s) 153, 333, 596, 1017
BspCNI CTCAG 2 cut(s) 79, 1586
BspDI ATCGAT 1 cut(s) 265
BspLI GGNNCC 3 cut(s) 891, 1168, 1617
BspOI GCTAGC 2 cut(s) 308, 768
BspPI GGATC 3 cut(s) 1610, 1623, 1751
BspT107I GGYRCC 1 cut(s) 889
BspTI CTTAAG 1 cut(s) 275
BsrDI GCAATG 2 cut(s) 183, 1286
BsrGI TGTACA 1 cut(s) 717
BsrI ACTGG 1 cut(s) 1039
BssECI CCNNGG 2 cut(s) 1170, 1611
BssMI GATC 3 cut(s) 1615, 1756, 2025
BssSI CACGAG 1 cut(s) 1620
BssT1I CCWWGG 2 cut(s) 1170, 1611
Bst2BI CACGAG 1 cut(s) 1620
Bst4CI ACNGT 2 cut(s) 85, 1498
Bst6I CTCTTC 2 cut(s) 101, 807
BstAFI CTTAAG 1 cut(s) 275
BstAUI TGTACA 1 cut(s) 717
BstBAI YACGTR 1 cut(s) 521
BstC8I GCNNGC 5 cut(s) 306, 766, 857, 1238, 1657
BstDEI CTNAG 5 cut(s) 66, 954, 1573, 1601, 1934
BstF5I GGATG 3 cut(s) 1384, 1462, 1957
BstKTI GATC 3 cut(s) 1618, 1759, 2028
BstMBI GATC 3 cut(s) 1615, 1756, 2025
BstMWI GCNNNNNNNGC 2 cut(s) 1246, 1907
BstNSI RCATGY 3 cut(s) 146, 1319, 1659
BstSCI CCNGG 1 cut(s) 439
BstSFI CTRYAG 1 cut(s) 876
BstV1I GCAGC 5 cut(s) 160, 307, 1054, 1057, 1303
BstV2I GAAGAC 2 cut(s) 2, 1516
BstX2I RGATCY 1 cut(s) 1615
BstYI RGATCY 1 cut(s) 1615
Bsu15I ATCGAT 1 cut(s) 265
BsuRI GGCC 4 cut(s) 153, 333, 596, 1017
BsuTUI ATCGAT 1 cut(s) 265
BtsCI GGATG 3 cut(s) 1384, 1462, 1957
BtsIMutI CAGTG 2 cut(s) 54, 1890
Cac8I GCNNGC 5 cut(s) 306, 766, 857, 1238, 1657
CaiI CAGNNNCTG 1 cut(s) 1034
Cfr13I GGNCC 2 cut(s) 1166, 1975
ClaI ATCGAT 1 cut(s) 265
CseI GACGC 1 cut(s) 947
Csp6I GTAC 7 cut(s) 454, 707, 718, 1032, 1053, 1313, 1461
CviAII CATG 6 cut(s) 143, 170, 335, 1316, 1418, 1656
CviQI GTAC 7 cut(s) 454, 707, 718, 1032, 1053, 1313, 1461
DdeI CTNAG 5 cut(s) 66, 954, 1573, 1601, 1934
DpnI GATC 3 cut(s) 1617, 1758, 2027
DpnII GATC 3 cut(s) 1615, 1756, 2025
DraI TTTAAA 1 cut(s) 1642
EaeI YGGCCR 2 cut(s) 594, 1015
Eam1104I CTCTTC 2 cut(s) 101, 807
EarI CTCTTC 2 cut(s) 101, 807
Ecl136II GAGCTC 1 cut(s) 1086
Eco130I CCWWGG 2 cut(s) 1170, 1611
Eco147I AGGCCT 1 cut(s) 153
Eco24I GRGCYC 1 cut(s) 1088
Eco47I GGWCC 2 cut(s) 1166, 1975
Eco53kI GAGCTC 1 cut(s) 1086
Eco57I CTGAAG 5 cut(s) 78, 1290, 1615, 1668, 1704
EcoICRI GAGCTC 1 cut(s) 1086
EcoO109I RGGNCCY 1 cut(s) 1166
EcoT14I CCWWGG 2 cut(s) 1170, 1611
EcoT38I GRGCYC 1 cut(s) 1088
ErhI CCWWGG 2 cut(s) 1170, 1611
FaeI CATG 6 cut(s) 146, 173, 338, 1319, 1421, 1659
FatI CATG 6 cut(s) 142, 169, 334, 1315, 1417, 1655
FauI CCCGC 1 cut(s) 355
FauNDI CATATG 1 cut(s) 21
FbaI TGATCA 1 cut(s) 2025
Fnu4HI GCNGC 5 cut(s) 174, 321, 1068, 1071, 1292
FokI GGATG 3 cut(s) 1391, 1469, 1964
FriOI GRGCYC 1 cut(s) 1088
Fsp4HI GCNGC 5 cut(s) 174, 321, 1068, 1071, 1292
FspBI CTAG 6 cut(s) 243, 305, 579, 765, 1715, 1859
GluI GCNGC 5 cut(s) 174, 321, 1068, 1071, 1292
GsaI CCCAGC 1 cut(s) 1378
HaeIII GGCC 4 cut(s) 153, 333, 596, 1017
HapII CCGG 2 cut(s) 441, 893
HgaI GACGC 1 cut(s) 947
Hin1II CATG 6 cut(s) 146, 173, 338, 1319, 1421, 1659
HindIII AAGCTT 1 cut(s) 2040
HinfI GANTC 8 cut(s) 7, 62, 536, 944, 1569, 1778, 2003, 2018
HpaII CCGG 2 cut(s) 441, 893
HphI GGTGA 4 cut(s) 73, 842, 1976, 2035
Hpy188I TCNGA 5 cut(s) 1284, 1576, 1588, 1789, 1825
Hpy188III TCNNGA 9 cut(s) 396, 635, 809, 1304, 1355, 1622, 1682, 1715, 1768
Hpy99I CGWCG 1 cut(s) 1473
HpyAV CCTTC 4 cut(s) 1364, 1643, 1735, 1988
HpyCH4III ACNGT 2 cut(s) 85, 1498
HpyCH4IV ACGT 2 cut(s) 520, 1078
HpyF10VI GCNNNNNNNGC 2 cut(s) 1246, 1907
HpyF3I CTNAG 5 cut(s) 66, 954, 1573, 1601, 1934
HpySE526I ACGT 2 cut(s) 520, 1078
Hsp92II CATG 6 cut(s) 146, 173, 338, 1319, 1421, 1659
Ksp22I TGATCA 1 cut(s) 2025
Kzo9I GATC 3 cut(s) 1615, 1756, 2025
LmnI GCTCC 3 cut(s) 317, 442, 1083
Lsp1109I GCAGC 5 cut(s) 160, 307, 1054, 1057, 1303
LweI GCATC 1 cut(s) 1513
MaeI CTAG 6 cut(s) 243, 305, 579, 765, 1715, 1859
MaeII ACGT 2 cut(s) 520, 1078
MaeIII GTNAC 1 cut(s) 792
MalI GATC 3 cut(s) 1617, 1758, 2027
MboI GATC 3 cut(s) 1615, 1756, 2025
MfeI CAATTG 1 cut(s) 860
MflI RGATCY 1 cut(s) 1615
MhlI GDGCHC 1 cut(s) 1088
MlsI TGGCCA 2 cut(s) 596, 1017
MluNI TGGCCA 2 cut(s) 596, 1017
MlyI GAGTC 1 cut(s) 16
MmeI TCCRAC 3 cut(s) 511, 1061, 1312
Mox20I TGGCCA 2 cut(s) 596, 1017
MscI TGGCCA 2 cut(s) 596, 1017
MslI CAYNNNNRTG 1 cut(s) 1518
Msp20I TGGCCA 2 cut(s) 596, 1017
MspCI CTTAAG 1 cut(s) 275
MspI CCGG 2 cut(s) 441, 893
MspR9I CCNGG 1 cut(s) 441
MunI CAATTG 1 cut(s) 860
Mva1269I GAATGC 4 cut(s) 77, 364, 877, 1447
MwoI GCNNNNNNNGC 2 cut(s) 1246, 1907
NciI CCSGG 1 cut(s) 441
NdeI CATATG 1 cut(s) 21
NdeII GATC 3 cut(s) 1615, 1756, 2025
NheI GCTAGC 2 cut(s) 304, 764
NlaIII CATG 6 cut(s) 146, 173, 338, 1319, 1421, 1659
NlaIV GGNNCC 3 cut(s) 891, 1168, 1617
NspI RCATGY 3 cut(s) 146, 1319, 1659
PaeI GCATGC 1 cut(s) 1659
PceI AGGCCT 1 cut(s) 153
PctI GAATGC 4 cut(s) 77, 364, 877, 1447
PfeI GAWTC 7 cut(s) 62, 536, 944, 1569, 1778, 2003, 2018
PflMI CCANNNNNTGG 1 cut(s) 1774
PfoI TCCNGGA 1 cut(s) 439
PkrI GCNGC 5 cut(s) 175, 322, 1069, 1072, 1293
PleI GAGTC 1 cut(s) 15
PpsI GAGTC 1 cut(s) 15
Ppu21I YACGTR 1 cut(s) 521
PpuMI RGGWCCY 1 cut(s) 1166
PsiI TTATAA 2 cut(s) 786, 1452
Psp124BI GAGCTC 1 cut(s) 1088
Psp5II RGGWCCY 1 cut(s) 1166
PspFI CCCAGC 1 cut(s) 1374
PspN4I GGNNCC 3 cut(s) 891, 1168, 1617
PspPI GGNCC 2 cut(s) 1166, 1975
PspPPI RGGWCCY 1 cut(s) 1166
PsrI GAACNNNNNNTAC 2 cut(s) 1581, 1613
PstNI CAGNNNCTG 1 cut(s) 1034
PsuI RGATCY 1 cut(s) 1615
RsaI GTAC 7 cut(s) 455, 708, 719, 1033, 1054, 1314, 1462
RsaNI GTAC 7 cut(s) 454, 707, 718, 1032, 1053, 1313, 1461
RseI CAYNNNNRTG 1 cut(s) 1518
SacI GAGCTC 1 cut(s) 1088
SatI GCNGC 5 cut(s) 174, 321, 1068, 1071, 1292
Sau3AI GATC 3 cut(s) 1615, 1756, 2025
Sau96I GGNCC 2 cut(s) 1166, 1975
ScaI AGTACT 1 cut(s) 708
SchI GAGTC 1 cut(s) 16
ScrFI CCNGG 1 cut(s) 441
SduI GDGCHC 1 cut(s) 1088
SfaNI GCATC 1 cut(s) 1513
SfcI CTRYAG 1 cut(s) 876
SinI GGWCC 2 cut(s) 1166, 1975
SmiMI CAYNNNNRTG 1 cut(s) 1518
SmlI CTYRAG 1 cut(s) 275
SmoI CTYRAG 1 cut(s) 275
SphI GCATGC 1 cut(s) 1659
SseBI AGGCCT 1 cut(s) 153
SsiI CCGC 2 cut(s) 362, 853
SspI AATATT 2 cut(s) 490, 545
SspMI CTAG 6 cut(s) 243, 305, 579, 765, 1715, 1859
SstI GAGCTC 1 cut(s) 1088
StuI AGGCCT 1 cut(s) 153
StyD4I CCNGG 1 cut(s) 439
StyI CCWWGG 2 cut(s) 1170, 1611
TaaI ACNGT 2 cut(s) 85, 1498
TaiI ACGT 2 cut(s) 523, 1081
TaqI TCGA 2 cut(s) 265, 634
TatI WGTACW 4 cut(s) 453, 706, 717, 1052
TfiI GAWTC 7 cut(s) 62, 536, 944, 1569, 1778, 2003, 2018
TscAI CASTG 2 cut(s) 61, 1897
TseI GCWGC 5 cut(s) 173, 320, 1067, 1070, 1291
TspRI CASTG 2 cut(s) 61, 1897
Van91I CCANNNNNTGG 1 cut(s) 1774
Vha464I CTTAAG 1 cut(s) 275
VpaK11BI GGWCC 2 cut(s) 1166, 1975
XapI RAATTY 3 cut(s) 934, 1771, 1826
XbaI TCTAGA 1 cut(s) 1714
XceI RCATGY 3 cut(s) 146, 1319, 1659
XspI CTAG 6 cut(s) 243, 305, 579, 765, 1715, 1859
ZrmI AGTACT 1 cut(s) 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.