Rw5G008290

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000122
Physical Location & Seq
Forward (+)
8898294 .. 8900686
2393 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G008290.1

Sequence Viewer

Length: 2238 bp
ATGATAACAGTTATGAAGAGATATTTTAAAAAAGTATCGAGACCAGAGGAGACTTCATCTTCTACGAAAAACAATGTTGATAGTGAAAGCTCAAAGAAAGATGAACTTGAAGCAATTTTGGATAATCTTCCTTCAGTCCCTGCATGTCGAAAGCGTATCTTGGATTATGATCCAAATATTCGTGATGAAGTTCGACGTCGTTATTTGCTCAAGGGTCCTTGTCAGCCTCGAAACCATGAGTTTCCCCAAACATTAATAATATATAGCATAGAAAATGATGCTGTGTTTTGTCTATGTTGTTGTCTCTTTAAACCACATCATGGTGACCAAGGAGGCGGTGATAAATTTACCTGCAAAGATCATGTTGGAGGTTTGGGTAGTGTTCACAACCAAGCTTTACTAAATTGCCAAGCTCTATTGAATCAGAAACAACATCTTGAGTCAGTTGTTAGTCGTCAATTGGAATCCTCTAAGCATAACTATTACACTCTCATGAATGCTTCAATTGATTGTGTTCGTTTCTTGTTGCGGCAAGGTCTTGCTTTTCGTGGTCATGATGAATCTGAATCCTCTAACAATAGAGGAAACTTTCTTGAACTTCTAGAATTTCTTGCTAAACATAATGACAGTGTGAAGGCTGTTGCCTTTGAAAATGCTCCTAGAAATCTACAGTTAACATCACCTGTTATACAGAAAGATATTATAAATGCAGCTGCAGTTGAAACTCTTAATGCAATCATGTTTGATATGGGTGATGCACCATTCTCTATTTTGGTTGATGAAGCACGAGATCATTCAGTAAAAGAACAGATGGCAGTTGTTCTTCGCTATGTAGACGATAAAGACCAGGTAATTGAAAGGTTTTTATTCTCCAGAAACGGGTTGAGCATATCAAATCTTCGAGGACAGGGCTATGATGGGGCTAGTAATATGCAAGGTGAGTTCAATGGTCTTAAGGCACTTATCTTGAAAGAAAATGATTGTGCATTTTATGTTCATTGTTTTGCACATCAACTTCAACTTGCCCTTGTTGCTTTAGCTAAAAATCATGTTCCAGTTGCTTCCTTTTTTTTCTTAGTGACAAGAGTGGTTAACATTGTTGGAGCATCATGTAAACGTCGTGATCTTCTTCGAGAGAAACAACAGAATGAAGTTATGGAAGCTCTTCACAATGACGAGCTTCTAAGTGGAAAAGGGTTGAATCAAGAAACTACTCTCAATCCTGGTGATACACGTTGGGGTTCACATTACGGCACCTTACTGAGTATTATTTCTATGTTTTCTTCCACAATTAAGGTGATTGAAATGATTATTGAAGATGGAACATATCCTGATCAGAGAGGGGAAGGTAATCTTTTATTAGCACAAGTGCAATCGTTTGACTTCATATTTTGTCTGTTTTTAATGAGACAAGTGTTAGGAGTCACGAATGATTTATCACAAGCATTACAAAAGAATGATCAAGATATTGTCAATGCTATGAATTTAGTCAAGGCATGCAAGCAACAACTACAAACAATGAGGGAAGACGAATGTGAATGGGAAACTTTTCTTGACAAGGTTTATTCTTTTTGTGGCAAGCATGGTATCAAGATTCCCAATATGGATGATGTCTTTGTTGCTCAAGCGAAATCCCAACGGAGAGCTGAAAAAATAACAAACCTTCATCATTATCGAGTGGAGGTCTTTTATACTGTGATTGATAGACAGCTTTCAGACTTGAATGACCGTTTTAATGAGGTAAACTCTGAGCTTCTTGTTTGTGTTGCAAGTTTAAGTCCAGATAATTTATTCTCCGCTTTTGATAAGCAAAAGTTACTCCGTCTTGCCAAATTCTATCCAAGAGATTTTTCTGAAAGAGATGTCTTATCACTTGAAGACAAGCTTGATATTTATCTTAATGAAATGCGATCCAACAGTGAATTTTCTCAATTGAAAGGAATTGGTAGTCTTGCTAAAAAATTGGTGGAGACAGGAAAGCACAAAACACATGCATCAGTCTACAAGCTTCTAACTTTGGCTTTAGTTCTACTGGTTGCAACAGCTTCAGTGGAAAGAGTATTCTCAGCTATGGACATTGTGAAGAATCCACTTCGTAATAGAATGGGGCATCAATGGATGAATGATAGTTTTCTTGTTTACATTGAGAAAGATATATTCAATAGCATTGGTAGTGATGCTATAATGCAGCGTTTTCAAAATATGAGATCGCGCCGTGGACAATTACCGTCTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

745

Amino Acids

84.75

Weight (kDa)

6.73

Isoelectric Point (pI)

41.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4371 PF14291 120 - 317 1.1e-51 Domain of unknown function (DUF4371)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 704
AatII GACGTC 1 cut(s) 199
Acc36I ACCTGC 1 cut(s) 359
AccB1I GGYRCC 1 cut(s) 1253
AccB7I CCANNNNNTGG 1 cut(s) 320
AccI GTMKAC 2 cut(s) 834, 2001
AccII CGCG 1 cut(s) 2212
AciI CCGC 3 cut(s) 336, 529, 1797
AclWI GGATC 2 cut(s) 164, 1905
AcsI RAATTY 5 cut(s) 344, 605, 1483, 1832, 1922
AcuI CTGAAG 2 cut(s) 117, 2031
AcyI GRCGYC 1 cut(s) 196
AfiI CCNNNNNNNGG 2 cut(s) 320, 879
AflII CTTAAG 1 cut(s) 953
AflIII ACRYGT 1 cut(s) 1232
AjnI CCWGG 2 cut(s) 846, 1222
AjuI GAANNNNNNNTTGG 2 cut(s) 1834, 1866
Alw26I GTCTC 5 cut(s) 34, 44, 308, 1402, 1964
AlwI GGATC 2 cut(s) 164, 1905
AlwNI CAGNNNCTG 1 cut(s) 140
ApeKI GCWGC 3 cut(s) 710, 713, 2188
ApoI RAATTY 5 cut(s) 344, 605, 1483, 1832, 1922
AseI ATTAAT 1 cut(s) 254
Asp700I GAANNNNTTC 2 cut(s) 1164, 1548
AspLEI GCGC 1 cut(s) 2214
AspS9I GGNCC 1 cut(s) 215
AsuHPI GGTGA 7 cut(s) 335, 350, 672, 764, 950, 1238, 1309
AvaII GGWCC 1 cut(s) 215
BanI GGYRCC 1 cut(s) 1253
BauI CACGAG 1 cut(s) 786
BbsI GAAGAC 2 cut(s) 1533, 1884
BbvI GCAGC 3 cut(s) 700, 722, 2200
BccI CCATC 3 cut(s) 805, 911, 1313
BceAI ACGGC 2 cut(s) 1267, 2199
BciT130I CCWGG 2 cut(s) 848, 1224
BclI TGATCA 2 cut(s) 1333, 1459
BcoDI GTCTC 5 cut(s) 34, 44, 308, 1402, 1964
BfaI CTAG 3 cut(s) 602, 660, 924
BfmI CTRYAG 2 cut(s) 668, 714
BfrI CTTAAG 1 cut(s) 953
BfuAI ACCTGC 1 cut(s) 359
BisI GCNGC 4 cut(s) 530, 711, 714, 2189
BlsI GCNGC 4 cut(s) 531, 712, 715, 2190
Bme1390I CCNGG 2 cut(s) 848, 1224
Bme18I GGWCC 1 cut(s) 215
BmgT120I GGNCC 1 cut(s) 215
BmiI GGNNCC 2 cut(s) 216, 1255
BmrFI CCNGG 2 cut(s) 848, 1224
BmsI GCATC 6 cut(s) 268, 745, 1115, 2003, 2119, 2167
BpiI GAAGAC 2 cut(s) 1533, 1884
BplI GAGNNNNNCTC 2 cut(s) 1730, 1762
BpmI CTGGAG 1 cut(s) 856
BpuEI CTTGAG 3 cut(s) 194, 458, 1608
BsaBI GATNNNNATC 2 cut(s) 168, 1893
BsaHI GRCGYC 1 cut(s) 196
BsaI GGTCTC 1 cut(s) 34
BsaJI CCNNGG 2 cut(s) 328, 2215
Bsc4I CCNNNNNNNGG 2 cut(s) 320, 879
Bse1I ACTGG 2 cut(s) 1055, 2037
Bse8I GATNNNNATC 2 cut(s) 168, 1893
BseBI CCWGG 2 cut(s) 848, 1224
BseDI CCNNGG 2 cut(s) 328, 2215
BseGI GGATG 2 cut(s) 1612, 2124
BseJI GATNNNNATC 2 cut(s) 168, 1893
BseLI CCNNNNNNNGG 2 cut(s) 320, 879
BseMII CTCAG 3 cut(s) 1253, 1740, 2079
BseNI ACTGG 2 cut(s) 1055, 2037
BseRI GAGGAG 1 cut(s) 62
BseXI GCAGC 3 cut(s) 700, 722, 2200
Bsh1236I CGCG 1 cut(s) 2212
BshNI GGYRCC 1 cut(s) 1253
BslFI GGGAC 1 cut(s) 122
BslI CCNNNNNNNGG 2 cut(s) 320, 879
BsmAI GTCTC 5 cut(s) 34, 44, 308, 1402, 1964
BsmFI GGGAC 1 cut(s) 122
BsmI GAATGC 1 cut(s) 502
Bso31I GGTCTC 1 cut(s) 34
Bsp143I GATC 8 cut(s) 169, 358, 790, 1123, 1333, 1459, 1910, 2207
BspACI CCGC 3 cut(s) 336, 529, 1797
BspCNI CTCAG 3 cut(s) 1254, 1741, 2078
BspFNI CGCG 1 cut(s) 2212
BspHI TCATGA 2 cut(s) 492, 553
BspLI GGNNCC 2 cut(s) 216, 1255
BspMAI CTGCAG 1 cut(s) 718
BspMI ACCTGC 1 cut(s) 359
BspPI GGATC 2 cut(s) 164, 1905
BspQI GCTCTTC 1 cut(s) 1170
BspT107I GGYRCC 1 cut(s) 1253
BspTI CTTAAG 1 cut(s) 953
BspTNI GGTCTC 1 cut(s) 34
BsrI ACTGG 2 cut(s) 1055, 2037
BssECI CCNNGG 2 cut(s) 328, 2215
BssMI GATC 8 cut(s) 169, 358, 790, 1123, 1333, 1459, 1910, 2207
BssNI GRCGYC 1 cut(s) 196
BssSI CACGAG 1 cut(s) 786
BssT1I CCWWGG 1 cut(s) 328
Bst2BI CACGAG 1 cut(s) 786
Bst2UI CCWGG 2 cut(s) 848, 1224
Bst4CI ACNGT 7 cut(s) 10, 629, 672, 1696, 1730, 1919, 2229
Bst6I CTCTTC 2 cut(s) 11, 1170
BstACI GRCGYC 1 cut(s) 196
BstAFI CTTAAG 1 cut(s) 953
BstC8I GCNNGC 3 cut(s) 1498, 1502, 1580
BstDEI CTNAG 6 cut(s) 471, 1075, 1184, 1262, 1749, 2065
BstDSI CCRYGG 1 cut(s) 2215
BstEII GGTNACC 1 cut(s) 323
BstF5I GGATG 2 cut(s) 1612, 2124
BstFNI CGCG 1 cut(s) 2212
BstHHI GCGC 1 cut(s) 2214
BstKTI GATC 8 cut(s) 172, 361, 793, 1126, 1336, 1462, 1913, 2210
BstMAI GTCTC 5 cut(s) 34, 44, 308, 1402, 1964
BstMBI GATC 8 cut(s) 169, 358, 790, 1123, 1333, 1459, 1910, 2207
BstMWI GCNNNNNNNGC 1 cut(s) 1031
BstNI CCWGG 2 cut(s) 848, 1224
BstNSI RCATGY 3 cut(s) 147, 1500, 1994
BstPI GGTNACC 1 cut(s) 323
BstSCI CCNGG 2 cut(s) 846, 1222
BstSFI CTRYAG 2 cut(s) 668, 714
BstUI CGCG 1 cut(s) 2212
BstV1I GCAGC 3 cut(s) 700, 722, 2200
BstV2I GAAGAC 2 cut(s) 1533, 1884
BtgI CCRYGG 1 cut(s) 2215
BtsCI GGATG 2 cut(s) 1612, 2124
BtsIMutI CAGTG 3 cut(s) 634, 1924, 2055
BveI ACCTGC 1 cut(s) 359
Cac8I GCNNGC 3 cut(s) 1498, 1502, 1580
CaiI CAGNNNCTG 1 cut(s) 140
CciI TCATGA 2 cut(s) 492, 553
CfoI GCGC 1 cut(s) 2214
Cfr13I GGNCC 1 cut(s) 215
CsiI ACCWGGT 1 cut(s) 846
DdeI CTNAG 6 cut(s) 471, 1075, 1184, 1262, 1749, 2065
DpnI GATC 8 cut(s) 171, 360, 792, 1125, 1335, 1461, 1912, 2209
DpnII GATC 8 cut(s) 169, 358, 790, 1123, 1333, 1459, 1910, 2207
DraI TTTAAA 2 cut(s) 28, 310
Eam1104I CTCTTC 2 cut(s) 11, 1170
EarI CTCTTC 2 cut(s) 11, 1170
Eco130I CCWWGG 1 cut(s) 328
Eco31I GGTCTC 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 215
Eco57I CTGAAG 2 cut(s) 117, 2031
Eco91I GGTNACC 1 cut(s) 323
EcoO109I RGGNCCY 1 cut(s) 215
EcoO65I GGTNACC 1 cut(s) 323
EcoRII CCWGG 2 cut(s) 846, 1222
EcoT14I CCWWGG 1 cut(s) 328
EcoT22I ATGCAT 1 cut(s) 1996
ErhI CCWWGG 1 cut(s) 328
FalI AAGNNNNNCTT 8 cut(s) 90, 122, 143, 175, 1338, 1370, 1869, 1901
FaqI GGGAC 1 cut(s) 122
FbaI TGATCA 2 cut(s) 1333, 1459
FblI GTMKAC 2 cut(s) 834, 2001
Fnu4HI GCNGC 4 cut(s) 530, 711, 714, 2189
FokI GGATG 2 cut(s) 1619, 2131
Fsp4HI GCNGC 4 cut(s) 530, 711, 714, 2189
FspBI CTAG 3 cut(s) 602, 660, 924
GlaI GCGC 1 cut(s) 2213
GluI GCNGC 4 cut(s) 530, 711, 714, 2189
GsuI CTGGAG 1 cut(s) 856
HhaI GCGC 1 cut(s) 2214
Hin1I GRCGYC 1 cut(s) 196
Hin6I GCGC 1 cut(s) 2212
HinP1I GCGC 1 cut(s) 2212
HincII GTYRAC 2 cut(s) 675, 1093
HindII GTYRAC 2 cut(s) 675, 1093
HindIII AAGCTT 3 cut(s) 393, 1883, 2006
HinfI GANTC 9 cut(s) 421, 440, 464, 560, 566, 1201, 1422, 1594, 2086
HpaI GTTAAC 2 cut(s) 675, 1093
HphI GGTGA 7 cut(s) 335, 350, 672, 764, 950, 1238, 1309
Hpy188I TCNGA 6 cut(s) 426, 565, 1338, 1717, 1750, 1855
Hpy99I CGWCG 3 cut(s) 198, 201, 1122
HpyAV CCTTC 4 cut(s) 141, 628, 1340, 1673
HpyCH4III ACNGT 7 cut(s) 10, 629, 672, 1696, 1730, 1919, 2229
HpyCH4IV ACGT 3 cut(s) 196, 1117, 1234
HpyF10VI GCNNNNNNNGC 1 cut(s) 1031
HpyF3I CTNAG 6 cut(s) 471, 1075, 1184, 1262, 1749, 2065
HpySE526I ACGT 3 cut(s) 196, 1117, 1234
Hsp92I GRCGYC 1 cut(s) 196
HspAI GCGC 1 cut(s) 2212
Ksp22I TGATCA 2 cut(s) 1333, 1459
KspAI GTTAAC 2 cut(s) 675, 1093
Kzo9I GATC 8 cut(s) 169, 358, 790, 1123, 1333, 1459, 1910, 2207
LguI GCTCTTC 1 cut(s) 1170
LmnI GCTCC 2 cut(s) 661, 1103
Lsp1109I GCAGC 3 cut(s) 700, 722, 2200
LweI GCATC 6 cut(s) 268, 745, 1115, 2003, 2119, 2167
MabI ACCWGGT 1 cut(s) 846
MaeI CTAG 3 cut(s) 602, 660, 924
MaeII ACGT 3 cut(s) 196, 1117, 1234
MaeIII GTNAC 4 cut(s) 323, 1078, 1423, 1815
MalI GATC 8 cut(s) 171, 360, 792, 1125, 1335, 1461, 1912, 2209
MboI GATC 8 cut(s) 169, 358, 790, 1123, 1333, 1459, 1910, 2207
MfeI CAATTG 3 cut(s) 458, 504, 1931
MlyI GAGTC 2 cut(s) 449, 1431
MmeI TCCRAC 3 cut(s) 346, 1081, 1938
Mph1103I ATGCAT 1 cut(s) 1996
MroXI GAANNNNTTC 2 cut(s) 1164, 1548
MslI CAYNNNNRTG 2 cut(s) 321, 491
MspA1I CMGCKG 1 cut(s) 713
MspCI CTTAAG 1 cut(s) 953
MspR9I CCNGG 2 cut(s) 848, 1224
MunI CAATTG 3 cut(s) 458, 504, 1931
Mva1269I GAATGC 1 cut(s) 502
MvaI CCWGG 2 cut(s) 848, 1224
MvnI CGCG 1 cut(s) 2212
MwoI GCNNNNNNNGC 1 cut(s) 1031
NdeII GATC 8 cut(s) 169, 358, 790, 1123, 1333, 1459, 1910, 2207
NlaIV GGNNCC 2 cut(s) 216, 1255
NmuCI GTSAC 3 cut(s) 323, 1078, 1423
NsiI ATGCAT 1 cut(s) 1996
NspI RCATGY 3 cut(s) 147, 1500, 1994
PaeI GCATGC 1 cut(s) 1500
PagI TCATGA 2 cut(s) 492, 553
PciSI GCTCTTC 1 cut(s) 1170
PctI GAATGC 1 cut(s) 502
PdmI GAANNNNTTC 2 cut(s) 1164, 1548
PfeI GAWTC 7 cut(s) 421, 464, 560, 566, 1201, 1594, 2086
PflMI CCANNNNNTGG 1 cut(s) 320
PkrI GCNGC 4 cut(s) 531, 712, 715, 2190
PleI GAGTC 2 cut(s) 448, 1430
PpsI GAGTC 2 cut(s) 448, 1430
PpuMI RGGWCCY 1 cut(s) 215
PshBI ATTAAT 1 cut(s) 254
PsiI TTATAA 1 cut(s) 704
Psp5II RGGWCCY 1 cut(s) 215
Psp6I CCWGG 2 cut(s) 846, 1222
PspEI GGTNACC 1 cut(s) 323
PspGI CCWGG 2 cut(s) 846, 1222
PspN4I GGNNCC 2 cut(s) 216, 1255
PspPI GGNCC 1 cut(s) 215
PspPPI RGGWCCY 1 cut(s) 215
PstI CTGCAG 1 cut(s) 718
PstNI CAGNNNCTG 1 cut(s) 140
PvuII CAGCTG 1 cut(s) 713
RseI CAYNNNNRTG 2 cut(s) 321, 491
SapI GCTCTTC 1 cut(s) 1170
SatI GCNGC 4 cut(s) 530, 711, 714, 2189
Sau3AI GATC 8 cut(s) 169, 358, 790, 1123, 1333, 1459, 1910, 2207
Sau96I GGNCC 1 cut(s) 215
SchI GAGTC 2 cut(s) 449, 1431
ScrFI CCNGG 2 cut(s) 848, 1224
SexAI ACCWGGT 1 cut(s) 846
SfaNI GCATC 6 cut(s) 268, 745, 1115, 2003, 2119, 2167
SfcI CTRYAG 2 cut(s) 668, 714
SinI GGWCC 1 cut(s) 215
SmiMI CAYNNNNRTG 2 cut(s) 321, 491
SmlI CTYRAG 4 cut(s) 209, 437, 953, 1623
SmoI CTYRAG 4 cut(s) 209, 437, 953, 1623
SphI GCATGC 1 cut(s) 1500
SsiI CCGC 3 cut(s) 336, 529, 1797
SspI AATATT 1 cut(s) 178
SspMI CTAG 3 cut(s) 602, 660, 924
StyD4I CCNGG 2 cut(s) 846, 1222
StyI CCWWGG 1 cut(s) 328
TaaI ACNGT 7 cut(s) 10, 629, 672, 1696, 1730, 1919, 2229
TaiI ACGT 3 cut(s) 199, 1120, 1237
TaqI TCGA 7 cut(s) 38, 148, 193, 229, 901, 1132, 1675
TauI GCSGC 1 cut(s) 532
TfiI GAWTC 7 cut(s) 421, 464, 560, 566, 1201, 1594, 2086
TscAI CASTG 3 cut(s) 634, 1924, 2055
TseFI GTSAC 3 cut(s) 323, 1078, 1423
TseI GCWGC 3 cut(s) 710, 713, 2188
Tsp45I GTSAC 3 cut(s) 323, 1078, 1423
TspGWI ACGGA 2 cut(s) 1654, 1811
TspRI CASTG 3 cut(s) 634, 1924, 2055
Van91I CCANNNNNTGG 1 cut(s) 320
Vha464I CTTAAG 1 cut(s) 953
VpaK11BI GGWCC 1 cut(s) 215
VspI ATTAAT 1 cut(s) 254
XapI RAATTY 5 cut(s) 344, 605, 1483, 1832, 1922
XbaI TCTAGA 1 cut(s) 601
XceI RCATGY 3 cut(s) 147, 1500, 1994
XmiI GTMKAC 2 cut(s) 834, 2001
XmnI GAANNNNTTC 2 cut(s) 1164, 1548
XspI CTAG 3 cut(s) 602, 660, 924
ZraI GACGTC 1 cut(s) 197
Zsp2I ATGCAT 1 cut(s) 1996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.