FvH4_7g19080

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000122
Physical Location & Seq
Reverse (-)
15838013 .. 15841701
3689 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g19080.t1

Sequence Viewer

Length: 1395 bp
ATGAAGCCTCTCAGCCTCCATGTCGACTTCTTTTCCAACCCCTTCTGGTTCAGGCCCGCGCTCTTTCTCTCGCCAGACTTCGACTCCGAGGCCTTCATCTCCGACCTCCGATCCGAGCTCCAGTCCTACCTCGCCTCCCACAACCACGACCTCATCGACCTCATCAACCGCGACTATAGGCCGACTTCGTCAACCTCAACACCAAGCTCGTCGACGTCGTCTCCAACATCTCGTCATCTAGCAGAGAAGAACATGAGGAAGCAGTCCTCAATCCATGGGTTTTTCAAAAGAAAAAGTACCGAGCAATCCGAACCCGAAGCCAATACATCAGCGTCTTTACCGTTGCCGATTGAGCCAGAGGTTCCCAATATTTCTCATCCCAAGTCAGCGCGAGTTGATTCCAATGATGATGAAATTAGCTTCGCATCTTTGGAGCGTGATCCAGGGCGGCGTCAACAAATATGGCAGTACCTGGTTAATAAGCAAGATGCAGTTCGCCGATTGTACATCAAGCTCGGACCAAATCAGCCTTTGCTTACCAAGTATCCTCAATCAGGACCACAAAATCATCGTCGTAGCTTTCAACCAACATGGTACGCTCTATTTCCTTCTTGGTTAGAATATTCTGAGGAGAAAGATGCAGCCTTTTGTCTACCATGTTTTCTTTTTCATAAGCCATCTGGGCATCAAGGGCACAAAACATTCACTGTTGATGGATTTCGTAACTGGAAGAAAGTTAGAGATGGTAAAGATATTTTGCATGCCATGACTCTTGTTGCCTCAACTAAAGCACTTTTACAAAGATTGAGAGATGATGGATGTGATCATATACTTATTGAGGTTGACATTTTTAATGCTGCAATTGACTCTCAATTGCAAGAACTGAATAGCCGATTCAATGAGAATGTGGTGAAGTTGATTGTCCTCTGTTCAGCTTTAGATCTCCGTGAAATTTGTAAGTCTTTTAGAATTGATGATGTTTATGAATTAATAGACAAATTCTATCCAAAAGACTTTGAAGATCATGAGAAGGCGCGTCTGAAAATACAACTTCAACATTTTTACAATGATGTGATTCGACTTCCGGAATTCAAGGCTTTGTTAACTATTTCTGCGATGGCTCAATGGCTTGTGAATACTAGAAGATCAATTGCATACCATCTGGTATATATGGTAGTTTCTTTGGTGCTCACTCTTCCTGTCTCAACAGCAACTACAGAGCGAGCATTCTCAGCTATGAAAATAGTGAAAACTAGACTTCGCAACCGAATGGAAGACGATTTTCTTACGGACTCTTTGATTATGTACATTGAAAAAGAAATCGTTGAGAAGATTAGTATAGACTCAATTATTGATGACTTTCGCAATATGCAAACTCGACGAGTCGCCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

465

Amino Acids

53.81

Weight (kDa)

7.26

Isoelectric Point (pI)

59.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COG2_N PF06148 16 - 60 9.1e-07 COG2 N-terminal
Dimer_Tnp_hAT PF05699 375 - 440 4.7e-10 hAT family C-terminal dimerisation region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19260 AT1G41920 AT1G42710 AT2G06541 AT2G06541 AT3G29450 AT3G29763 AT3G29765 AT3G31402 AT3G31402 AT4G09660
fragaria_vesca FvH4_1g22711 FvH4_3g10612 FvH4_3g23261 FvH4_3g31623 FvH4_3g33391 FvH4_3g37321 FvH4_3g43192 FvH4_3g43193 FvH4_4g00181 FvH4_4g00251 FvH4_4g08751 FvH4_4g15271 FvH4_5g27190 FvH4_6g02122 FvH4_6g26880 FvH4_6g35121 FvH4_7g16871 FvH4_7g19080 FvH4_7g30071
malus_domestica MD02G1162100.v1.1 MD03G1081700.v1.1 MD09G1280500.v1.1 MD12G1083800.v1.1 MD12G1128200.v1.1
prunus_persica Prupe.7G129800_v2.0.a1
pyrus_communis pycom01g08000 pycom02g13840 pycom02g18030 pycom04g01290 pycom04g12580 pycom05g02550 pycom05g06740 pycom05g26200 pycom07g09850 pycom08g10610 pycom10g11280 pycom11g12580 pycom11g22260 pycom12g18440 pycom13g20080 pycom15g25600 pycom16g23600 pycom17g10070
rosa_chinensis RchiOBHm_Chr1g0313551 RchiOBHm_Chr1g0364331 RchiOBHm_Chr1g0369741 RchiOBHm_Chr1g0380371 RchiOBHm_Chr2g0097391 RchiOBHm_Chr2g0113561 RchiOBHm_Chr2g0114151 RchiOBHm_Chr2g0119761 RchiOBHm_Chr2g0149851 RchiOBHm_Chr2g0151931 RchiOBHm_Chr2g0166411 RchiOBHm_Chr3g0453661 RchiOBHm_Chr3g0466101 RchiOBHm_Chr3g0477911 RchiOBHm_Chr3g0486441 RchiOBHm_Chr4g0390161 RchiOBHm_Chr4g0392191 RchiOBHm_Chr4g0414461 RchiOBHm_Chr4g0421421 RchiOBHm_Chr5g0023801 RchiOBHm_Chr5g0040121 RchiOBHm_Chr5g0045381 RchiOBHm_Chr5g0061511 RchiOBHm_Chr5g0062621 RchiOBHm_Chr5g0064161 RchiOBHm_Chr5g0068711 RchiOBHm_Chr6g0246041 RchiOBHm_Chr6g0252511 RchiOBHm_Chr6g0252521 RchiOBHm_Chr6g0263361 RchiOBHm_Chr6g0269451 RchiOBHm_Chr6g0275351 RchiOBHm_Chr6g0288481 RchiOBHm_Chr6g0310011 RchiOBHm_Chr6g0310021 RchiOBHm_Chr7g0223071 RchiOBHm_Chr7g0227621 RchiOBHm_Chr7g0242581
rosa_laevigata RLG00000033957
rosa_multiflora Rmu_co8455865.1_g000001 Rmu_sc0000021.1_g000011 Rmu_sc0000079.1_g000049 Rmu_sc0000087.1_g000015 Rmu_sc0000151.1_g000008 Rmu_sc0000365.1_g000014 Rmu_sc0000446.1_g000054 Rmu_sc0000446.1_g000055 Rmu_sc0000534.1_g000006 Rmu_sc0000724.1_g000020 Rmu_sc0000859.1_g000001 Rmu_sc0000876.1_g000002 Rmu_sc0000881.1_g000005 Rmu_sc0000929.1_g000014 Rmu_sc0001112.1_g000004 Rmu_sc0001136.1_g000009 Rmu_sc0001353.1_g000064 Rmu_sc0001662.1_g000005 Rmu_sc0001764.1_g000006 Rmu_sc0001982.1_g000015 Rmu_sc0002052.1_g000008 Rmu_sc0002052.1_g000009 Rmu_sc0002158.1_g000011 Rmu_sc0002285.1_g000005 Rmu_sc0002983.1_g000025 Rmu_sc0003063.1_g000006 Rmu_sc0003076.1_g000005 Rmu_sc0003221.1_g000053 Rmu_sc0003382.1_g000010 Rmu_sc0003733.1_g000054 Rmu_sc0003997.1_g000005 Rmu_sc0004283.1_g000008 Rmu_sc0004283.1_g000053 Rmu_sc0004509.1_g000007 Rmu_sc0004540.1_g000028 Rmu_sc0004657.1_g000005 Rmu_sc0004935.1_g000006 Rmu_sc0005072.1_g000003 Rmu_sc0005248.1_g000001 Rmu_sc0006161.1_g000001 Rmu_sc0006209.1_g000005 Rmu_sc0006576.1_g000018 Rmu_sc0006576.1_g000019 Rmu_sc0007121.1_g000016 Rmu_sc0007121.1_g000032 Rmu_sc0007753.1_g000016 Rmu_sc0007795.1_g000009 Rmu_sc0007841.1_g000019 Rmu_sc0008339.1_g000021 Rmu_sc0008339.1_g000022 Rmu_sc0008432.1_g000001 Rmu_sc0008633.1_g000009 Rmu_sc0009104.1_g000013 Rmu_sc0011469.1_g000001 Rmu_sc0012039.1_g000001 Rmu_sc0013947.1_g000007 Rmu_sc0015560.1_g000001 Rmu_sc0017369.1_g000001 Rmu_sc0021648.1_g000001 Rmu_sc0022867.1_g000003 Rmu_sc0027801.1_g000001 Rmu_sc0027801.1_g000002 Rmu_sc0029861.1_g000001 Rmu_sc0030314.1_g000001 Rmu_sc0040149.1_g000001 Rmu_ssc0000089.1_g000028 Rmu_ssc0000480.1_g000033
rosa_roxburghii Rroxscaffold_1G00002540 Rroxscaffold_1G00013960 Rroxscaffold_1G00041160 Rroxscaffold_1G00045580 Rroxscaffold_3G00247310 Rroxscaffold_3G00267070 Rroxscaffold_4G00313830 Rroxscaffold_5G00372270 Rroxscaffold_6G00404800 Rroxscaffold_6G00406090
rosa_rugosa Rorug03G0269800 Rorug04G0142900 Rorug04G0152600 Rorug05G0223300.1 Rorug05G0266400 Rorug06G0008900 Rorug07G0086000 Rorug07G0205800 Rorug07G0270900
rosa_wichuraiana Rw0G001600 Rw0G017220 Rw0G017620 Rw0G018380 Rw1G002320 Rw1G020940 Rw1G021200 Rw1G022610 Rw1G038680 Rw2G013320 Rw2G016850 Rw2G024020 Rw2G025210 Rw2G032270 Rw2G039490 Rw2G041630 Rw2G048450 Rw2G051510 Rw3G025320 Rw4G003260 Rw4G007300 Rw4G009290 Rw4G010910 Rw4G013260 Rw5G008190 Rw5G008290 Rw5G018740 Rw5G023640 Rw5G028800 Rw5G031830 Rw5G041280 Rw5G044050 Rw6G007060 Rw6G008230 Rw6G009960 Rw6G013460 Rw6G014610 Rw6G017780 Rw6G033200 Rw7G021340 Rw7G023750 Rw7G032290 Rw7G032450 Rw7G033880 Rw7G038580 Rw7G040180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 218
AccI GTMKAC 3 cut(s) 24, 212, 652
AccII CGCG 4 cut(s) 59, 171, 391, 1036
AccIII TCCGGA 1 cut(s) 1084
AciI CCGC 3 cut(s) 57, 169, 448
AclWI GGATC 2 cut(s) 105, 434
AcsI RAATTY 3 cut(s) 951, 998, 1088
AcyI GRCGYC 2 cut(s) 215, 451
AfaI GTAC 5 cut(s) 298, 470, 506, 596, 1307
AfiI CCNNNNNNNGG 1 cut(s) 554
AgsI TTSAA 7 cut(s) 286, 584, 898, 1019, 1055, 1093, 1313
AjnI CCWGG 2 cut(s) 442, 471
AluBI AGCT 7 cut(s) 118, 207, 420, 514, 579, 935, 1235
AluI AGCT 7 cut(s) 118, 207, 420, 514, 579, 935, 1235
Alw21I GWGCWC 2 cut(s) 120, 1191
Alw26I GTCTC 2 cut(s) 225, 1207
AlwI GGATC 2 cut(s) 105, 434
AlwNI CAGNNNCTG 1 cut(s) 472
Aor13HI TCCGGA 1 cut(s) 1084
AoxI GGCC 3 cut(s) 53, 90, 179
ApeKI GCWGC 2 cut(s) 641, 857
ApoI RAATTY 3 cut(s) 951, 998, 1088
ArsI GACNNNNNNTTYG 2 cut(s) 556, 588
AseI ATTAAT 1 cut(s) 989
AspLEI GCGC 3 cut(s) 61, 391, 1036
AspS9I GGNCC 3 cut(s) 54, 518, 557
AsuHPI GGTGA 1 cut(s) 922
AvaII GGWCC 2 cut(s) 518, 557
BaeGI GKGCMC 1 cut(s) 696
BanII GRGCYC 1 cut(s) 120
BbsI GAAGAC 1 cut(s) 1281
Bbv12I GWGCWC 2 cut(s) 120, 1191
BbvI GCAGC 2 cut(s) 653, 844
BccI CCATC 6 cut(s) 685, 707, 737, 809, 1111, 1167
BciT130I CCWGG 2 cut(s) 444, 473
BciVI GTATCC 1 cut(s) 555
BclI TGATCA 1 cut(s) 823
BcoDI GTCTC 2 cut(s) 225, 1207
BfaI CTAG 3 cut(s) 239, 1140, 1254
BfmI CTRYAG 2 cut(s) 175, 1215
BfuI GTATCC 1 cut(s) 555
BglI GCCNNNNNGGC 1 cut(s) 682
BglII AGATCT 1 cut(s) 940
BisI GCNGC 3 cut(s) 449, 642, 858
BlsI GCNGC 3 cut(s) 450, 643, 859
Bme1390I CCNGG 2 cut(s) 444, 473
Bme18I GGWCC 2 cut(s) 518, 557
BmgT120I GGNCC 3 cut(s) 54, 518, 557
BmiI GGNNCC 1 cut(s) 363
BmrFI CCNGG 2 cut(s) 444, 473
BmsI GCATC 4 cut(s) 434, 478, 628, 694
BpiI GAAGAC 1 cut(s) 1281
BpmI CTGGAG 1 cut(s) 104
BsaHI GRCGYC 2 cut(s) 215, 451
BsaJI CCNNGG 3 cut(s) 87, 274, 443
BsaWI WCCGGW 1 cut(s) 1084
BsaXI ACNNNNNCTCC 6 cut(s) 68, 98, 119, 149, 205, 235
Bsc4I CCNNNNNNNGG 1 cut(s) 554
Bse1I ACTGG 2 cut(s) 121, 731
BseAI TCCGGA 1 cut(s) 1084
BseBI CCWGG 2 cut(s) 444, 473
BseDI CCNNGG 3 cut(s) 87, 274, 443
BseGI GGATG 2 cut(s) 376, 824
BseLI CCNNNNNNNGG 1 cut(s) 554
BseMII CTCAG 3 cut(s) 25, 618, 1245
BseNI ACTGG 2 cut(s) 121, 731
BseRI GAGGAG 1 cut(s) 644
BseSI GKGCMC 1 cut(s) 696
BseXI GCAGC 2 cut(s) 653, 844
Bsh1236I CGCG 4 cut(s) 59, 171, 391, 1036
BshFI GGCC 3 cut(s) 55, 92, 181
BsiHKAI GWGCWC 2 cut(s) 120, 1191
BsiSI CCGG 1 cut(s) 1085
BslI CCNNNNNNNGG 1 cut(s) 554
BsmAI GTCTC 2 cut(s) 225, 1207
BsmBI CGTCTC 1 cut(s) 225
BsmI GAATGC 1 cut(s) 1226
BsnI GGCC 3 cut(s) 55, 92, 181
Bsp1286I GDGCHC 3 cut(s) 120, 696, 1191
Bsp13I TCCGGA 1 cut(s) 1084
Bsp1407I TGTACA 2 cut(s) 504, 1305
Bsp143I GATC 6 cut(s) 110, 439, 823, 940, 1021, 1145
Bsp19I CCATGG 1 cut(s) 274
BspACI CCGC 3 cut(s) 57, 169, 448
BspANI GGCC 3 cut(s) 55, 92, 181
BspCNI CTCAG 3 cut(s) 24, 619, 1244
BspEI TCCGGA 1 cut(s) 1084
BspFNI CGCG 4 cut(s) 59, 171, 391, 1036
BspHI TCATGA 1 cut(s) 1024
BspLI GGNNCC 1 cut(s) 363
BspPI GGATC 2 cut(s) 105, 434
BsrGI TGTACA 2 cut(s) 504, 1305
BsrI ACTGG 2 cut(s) 121, 731
BssECI CCNNGG 3 cut(s) 87, 274, 443
BssMI GATC 6 cut(s) 110, 439, 823, 940, 1021, 1145
BssNI GRCGYC 2 cut(s) 215, 451
BssT1I CCWWGG 1 cut(s) 274
Bst2UI CCWGG 2 cut(s) 444, 473
Bst4CI ACNGT 2 cut(s) 342, 709
Bst6I CTCTTC 1 cut(s) 1200
BstACI GRCGYC 2 cut(s) 215, 451
BstAUI TGTACA 2 cut(s) 504, 1305
BstC8I GCNNGC 3 cut(s) 57, 762, 1224
BstDEI CTNAG 3 cut(s) 11, 627, 1231
BstDSI CCRYGG 1 cut(s) 274
BstENI CCTNNNNNAGG 1 cut(s) 552
BstF5I GGATG 2 cut(s) 376, 824
BstFNI CGCG 4 cut(s) 59, 171, 391, 1036
BstHHI GCGC 3 cut(s) 61, 391, 1036
BstKTI GATC 6 cut(s) 113, 442, 826, 943, 1024, 1148
BstMAI GTCTC 2 cut(s) 225, 1207
BstMBI GATC 6 cut(s) 110, 439, 823, 940, 1021, 1145
BstMWI GCNNNNNNNGC 4 cut(s) 352, 682, 691, 1232
BstNI CCWGG 2 cut(s) 444, 473
BstNSI RCATGY 1 cut(s) 764
BstSCI CCNGG 2 cut(s) 442, 471
BstSFI CTRYAG 2 cut(s) 175, 1215
BstSLI GKGCMC 1 cut(s) 696
BstUI CGCG 4 cut(s) 59, 171, 391, 1036
BstV1I GCAGC 2 cut(s) 653, 844
BstV2I GAAGAC 1 cut(s) 1281
BstX2I RGATCY 1 cut(s) 940
BstYI RGATCY 1 cut(s) 940
BsuI GTATCC 1 cut(s) 555
BsuRI GGCC 3 cut(s) 55, 92, 181
BtgI CCRYGG 1 cut(s) 274
BtgZI GCGATG 1 cut(s) 1130
BtsCI GGATG 2 cut(s) 376, 824
BtsIMutI CAGTG 1 cut(s) 705
Cac8I GCNNGC 3 cut(s) 57, 762, 1224
CaiI CAGNNNCTG 1 cut(s) 472
CciI TCATGA 1 cut(s) 1024
CfoI GCGC 3 cut(s) 61, 391, 1036
Cfr13I GGNCC 3 cut(s) 54, 518, 557
CseI GACGC 3 cut(s) 321, 440, 1025
CsiI ACCWGGT 1 cut(s) 471
Csp6I GTAC 5 cut(s) 297, 469, 505, 595, 1306
CviAII CATG 8 cut(s) 20, 253, 275, 591, 657, 761, 766, 1025
CviQI GTAC 5 cut(s) 297, 469, 505, 595, 1306
DdeI CTNAG 3 cut(s) 11, 627, 1231
DpnI GATC 6 cut(s) 112, 441, 825, 942, 1023, 1147
DpnII GATC 6 cut(s) 110, 439, 823, 940, 1021, 1145
Eam1104I CTCTTC 1 cut(s) 1200
EarI CTCTTC 1 cut(s) 1200
Ecl136II GAGCTC 1 cut(s) 118
Eco130I CCWWGG 1 cut(s) 274
Eco147I AGGCCT 1 cut(s) 92
Eco24I GRGCYC 1 cut(s) 120
Eco47I GGWCC 2 cut(s) 518, 557
Eco53kI GAGCTC 1 cut(s) 118
EcoICRI GAGCTC 1 cut(s) 118
EcoNI CCTNNNNNAGG 1 cut(s) 552
EcoRI GAATTC 1 cut(s) 1088
EcoRII CCWGG 2 cut(s) 442, 471
EcoT14I CCWWGG 1 cut(s) 274
EcoT38I GRGCYC 1 cut(s) 120
ErhI CCWWGG 1 cut(s) 274
Esp3I CGTCTC 1 cut(s) 225
FaeI CATG 8 cut(s) 23, 256, 278, 594, 660, 764, 769, 1028
FatI CATG 8 cut(s) 19, 252, 274, 590, 656, 760, 765, 1024
FauI CCCGC 1 cut(s) 64
FbaI TGATCA 1 cut(s) 823
FblI GTMKAC 3 cut(s) 24, 212, 652
Fnu4HI GCNGC 3 cut(s) 449, 642, 858
FokI GGATG 2 cut(s) 363, 831
FriOI GRGCYC 1 cut(s) 120
Fsp4HI GCNGC 3 cut(s) 449, 642, 858
FspBI CTAG 3 cut(s) 239, 1140, 1254
GlaI GCGC 3 cut(s) 60, 390, 1035
GluI GCNGC 3 cut(s) 449, 642, 858
GsuI CTGGAG 1 cut(s) 104
HaeIII GGCC 3 cut(s) 55, 92, 181
HapII CCGG 1 cut(s) 1085
HgaI GACGC 3 cut(s) 321, 440, 1025
HhaI GCGC 3 cut(s) 61, 391, 1036
Hin1I GRCGYC 2 cut(s) 215, 451
Hin1II CATG 8 cut(s) 23, 256, 278, 594, 660, 764, 769, 1028
Hin6I GCGC 3 cut(s) 59, 389, 1034
HinP1I GCGC 3 cut(s) 59, 389, 1034
HincII GTYRAC 6 cut(s) 25, 192, 213, 455, 844, 1104
HindII GTYRAC 6 cut(s) 25, 192, 213, 455, 844, 1104
HinfI GANTC 9 cut(s) 83, 398, 769, 866, 894, 1075, 1292, 1343, 1383
HpaI GTTAAC 1 cut(s) 1104
HpaII CCGG 1 cut(s) 1085
HphI GGTGA 1 cut(s) 922
Hpy166II GTNNAC 7 cut(s) 25, 192, 213, 455, 653, 844, 1104
Hpy188I TCNGA 8 cut(s) 88, 103, 110, 115, 310, 518, 628, 1041
Hpy188III TCNNGA 3 cut(s) 555, 1025, 1085
Hpy8I GTNNAC 7 cut(s) 25, 192, 213, 455, 653, 844, 1104
Hpy99I CGWCG 5 cut(s) 214, 217, 220, 576, 1383
HpyAV CCTTC 4 cut(s) 52, 103, 618, 1024
HpyCH4III ACNGT 2 cut(s) 342, 709
HpyCH4IV ACGT 1 cut(s) 215
HpyCH4V TGCA 7 cut(s) 491, 641, 760, 860, 877, 1154, 1372
HpyF10VI GCNNNNNNNGC 4 cut(s) 352, 682, 691, 1232
HpyF3I CTNAG 3 cut(s) 11, 627, 1231
HpySE526I ACGT 1 cut(s) 215
Hsp92I GRCGYC 2 cut(s) 215, 451
Hsp92II CATG 8 cut(s) 23, 256, 278, 594, 660, 764, 769, 1028
HspAI GCGC 3 cut(s) 59, 389, 1034
Kpn2I TCCGGA 1 cut(s) 1084
Ksp22I TGATCA 1 cut(s) 823
KspAI GTTAAC 1 cut(s) 1104
Kzo9I GATC 6 cut(s) 110, 439, 823, 940, 1021, 1145
LmnI GCTCC 2 cut(s) 123, 433
Lsp1109I GCAGC 2 cut(s) 653, 844
LweI GCATC 4 cut(s) 434, 478, 628, 694
MabI ACCWGGT 1 cut(s) 471
MaeI CTAG 3 cut(s) 239, 1140, 1254
MaeII ACGT 1 cut(s) 215
MaeIII GTNAC 1 cut(s) 722
MalI GATC 6 cut(s) 112, 441, 825, 942, 1023, 1147
MboI GATC 6 cut(s) 110, 439, 823, 940, 1021, 1145
MboII GAAGA 7 cut(s) 259, 742, 1031, 1155, 1187, 1286, 1342
MfeI CAATTG 3 cut(s) 861, 872, 1149
MflI RGATCY 1 cut(s) 940
MhlI GDGCHC 3 cut(s) 120, 696, 1191
MlyI GAGTC 6 cut(s) 77, 763, 860, 1286, 1337, 1392
MmeI TCCRAC 3 cut(s) 60, 126, 248
MroI TCCGGA 1 cut(s) 1084
MseI TTAA 4 cut(s) 477, 852, 989, 1103
MspI CCGG 1 cut(s) 1085
MspR9I CCNGG 2 cut(s) 444, 473
MunI CAATTG 3 cut(s) 861, 872, 1149
Mva1269I GAATGC 1 cut(s) 1226
MvaI CCWGG 2 cut(s) 444, 473
MvnI CGCG 4 cut(s) 59, 171, 391, 1036
MwoI GCNNNNNNNGC 4 cut(s) 352, 682, 691, 1232
NcoI CCATGG 1 cut(s) 274
NdeII GATC 6 cut(s) 110, 439, 823, 940, 1021, 1145
NlaIII CATG 8 cut(s) 23, 256, 278, 594, 660, 764, 769, 1028
NlaIV GGNNCC 1 cut(s) 363
NspI RCATGY 1 cut(s) 764
PaeI GCATGC 1 cut(s) 764
PagI TCATGA 1 cut(s) 1024
PceI AGGCCT 1 cut(s) 92
PcsI WCGNNNNNNNCGW 2 cut(s) 153, 215
PctI GAATGC 1 cut(s) 1226
PfeI GAWTC 3 cut(s) 398, 894, 1075
PflFI GACNNNGTC 2 cut(s) 187, 217
PkrI GCNGC 3 cut(s) 450, 643, 859
PleI GAGTC 6 cut(s) 77, 763, 860, 1286, 1337, 1391
PpsI GAGTC 6 cut(s) 77, 763, 860, 1286, 1337, 1391
PshBI ATTAAT 1 cut(s) 989
Psp124BI GAGCTC 1 cut(s) 120
Psp6I CCWGG 2 cut(s) 442, 471
PspGI CCWGG 2 cut(s) 442, 471
PspN4I GGNNCC 1 cut(s) 363
PspPI GGNCC 3 cut(s) 54, 518, 557
PstNI CAGNNNCTG 1 cut(s) 472
PsuI RGATCY 1 cut(s) 940
PsyI GACNNNGTC 2 cut(s) 187, 217
RsaI GTAC 5 cut(s) 298, 470, 506, 596, 1307
RsaNI GTAC 5 cut(s) 297, 469, 505, 595, 1306
SacI GAGCTC 1 cut(s) 120
SalI GTCGAC 2 cut(s) 23, 211
SaqAI TTAA 4 cut(s) 477, 852, 989, 1103
SatI GCNGC 3 cut(s) 449, 642, 858
Sau3AI GATC 6 cut(s) 110, 439, 823, 940, 1021, 1145
Sau96I GGNCC 3 cut(s) 54, 518, 557
SchI GAGTC 6 cut(s) 77, 763, 860, 1286, 1337, 1392
ScrFI CCNGG 2 cut(s) 444, 473
SduI GDGCHC 3 cut(s) 120, 696, 1191
SexAI ACCWGGT 1 cut(s) 471
SfaNI GCATC 4 cut(s) 434, 478, 628, 694
SfcI CTRYAG 2 cut(s) 175, 1215
SgrDI CGTCGACG 1 cut(s) 211
SinI GGWCC 2 cut(s) 518, 557
SphI GCATGC 1 cut(s) 764
SseBI AGGCCT 1 cut(s) 92
SsiI CCGC 3 cut(s) 57, 169, 448
SspI AATATT 2 cut(s) 370, 623
SspMI CTAG 3 cut(s) 239, 1140, 1254
SstI GAGCTC 1 cut(s) 120
StuI AGGCCT 1 cut(s) 92
StyD4I CCNGG 2 cut(s) 442, 471
StyI CCWWGG 1 cut(s) 274
TaaI ACNGT 2 cut(s) 342, 709
TaiI ACGT 1 cut(s) 218
TaqI TCGA 6 cut(s) 24, 81, 156, 212, 1078, 1378
TatI WGTACW 2 cut(s) 504, 1305
TauI GCSGC 1 cut(s) 451
TfiI GAWTC 3 cut(s) 398, 894, 1075
Tru1I TTAA 4 cut(s) 477, 852, 989, 1103
Tru9I TTAA 4 cut(s) 477, 852, 989, 1103
TscAI CASTG 1 cut(s) 712
TseI GCWGC 2 cut(s) 641, 857
TspDTI ATGAA 6 cut(s) 17, 85, 426, 659, 999, 1253
TspGWI ACGGA 2 cut(s) 935, 1304
TspRI CASTG 1 cut(s) 712
Tth111I GACNNNGTC 2 cut(s) 187, 217
VpaK11BI GGWCC 2 cut(s) 518, 557
VspI ATTAAT 1 cut(s) 989
XagI CCTNNNNNAGG 1 cut(s) 552
XapI RAATTY 3 cut(s) 951, 998, 1088
XceI RCATGY 1 cut(s) 764
XmiI GTMKAC 3 cut(s) 24, 212, 652
XspI CTAG 3 cut(s) 239, 1140, 1254
ZraI GACGTC 1 cut(s) 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.